Removed everything from 'web' directory except genofiles and renamed the directory to 'genotype_files'

1 files changed, 0 insertions, 129 deletions

diff --git a/web/webqtl/misc/editHtmlPage.py b/web/webqtl/misc/editHtmlPage.py
deleted file mode 100755
index 68595b83..00000000
--- a/web/webqtl/misc/editHtmlPage.py
+++ /dev/null
@@ -1,129 +0,0 @@
-# Copyright (C) University of Tennessee Health Science Center, Memphis, TN.
-#
-# This program is free software: you can redistribute it and/or modify it
-# under the terms of the GNU Affero General Public License
-# as published by the Free Software Foundation, either version 3 of the
-# License, or (at your option) any later version.
-#
-# This program is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
-# See the GNU Affero General Public License for more details.
-#
-# This program is available from Source Forge: at GeneNetwork Project
-# (sourceforge.net/projects/genenetwork/).
-#
-# Contact Drs. Robert W. Williams and Xiaodong Zhou (2010)
-# at rwilliams@uthsc.edu and xzhou15@uthsc.edu
-#
-#
-#
-# This module is used by GeneNetwork project (www.genenetwork.org)
-#
-# Created by GeneNetwork Core Team 2010/08/10
-#
-# Last updated by GeneNetwork Core Team 2010/10/20
-
-import string
-import os
-import urlparse
-
-from htmlgen import HTMLgen2 as HT
-
-from base.templatePage import templatePage
-from base import webqtlConfig
-from utility import webqtlUtil
-
-
-#########################################
-#      Edit HTML Page
-#########################################
-
-class editHtmlPage(templatePage):
-	htmlPath = webqtlConfig.ChangableHtmlPath
-
-	def __init__(self, fd):
-
-		templatePage.__init__(self, fd)
-
-		self.templateInclude = 1
-		self.dict['title'] = "Editing HTML"
-
-		if not self.updMysql():
-			return
-
-		if webqtlConfig.USERDICT[self.privilege] >= webqtlConfig.USERDICT['user']:
-			pass
-		else:
-			heading = "Editing HTML"
-			detail = ["You don't have the permission to modify this file"]
-			self.error(heading=heading,detail=detail,error="Error")
-			return
-
-		path = fd.formdata.getvalue('path')
-		preview = fd.formdata.getvalue('preview')
-		newHtmlCode = fd.formdata.getvalue('htmlSrc')
-		if newHtmlCode:
-			#newHtmlCode = string.replace(newHtmlCode, "&image", "&image")
-			newHtmlCode = string.replace(newHtmlCode,"&", "&")
-		if path and preview:
-			#preview
-			self.templateInclude = 0
-			#print newHtmlCode
-			self.debug = newHtmlCode
-		elif path:
-			#edit result
-			fileName = self.htmlPath + path
-			newfileName = fileName +'.old'
-			os.system("/bin/cp -f %s %s" % (fileName, newfileName))
-			fp = open(fileName, 'wb')
-			fp.write(newHtmlCode)
-			fp.close()
-			#print "chown qyh %s" % fileName
-			TD_LR = HT.TD(valign="top",colspan=2,bgcolor="#eeeeee", height=200)
-			mainTitle = HT.Paragraph("Edit HTML", Class="title")
-			url = HT.Href(text = "page", url =path, Class = "normal")
-			intro = HT.Blockquote("This ",url, " has been succesfully modified. ")
-			TD_LR.append(mainTitle, intro)
-			self.dict['body'] = TD_LR
-		#elif os.environ.has_key('HTTP_REFERER'):
-		elif fd.refURL:
-			#retrieve file to be edited
-			#refURL = os.environ['HTTP_REFERER']
-			addressing_scheme, network_location, path, parameters, query, fragment_identifier = urlparse.urlparse(fd.refURL)
-			if path[-1] == "/":
-				path += 'index.html'
-				
-			fileName = self.htmlPath + path
-			try:
-				fp = open(fileName,'rb')
-			except:
-				fp = open(os.path.join(self.htmlPath, 'temp.html'),'rb')
-			htmlCode = fp.read()
-			#htmlCode = string.replace(htmlCode, "&nbsp","&nbsp")
-			htmlCode = string.replace(htmlCode, "&","&")
-			fp.close()
-			form = HT.Form(cgi= os.path.join(webqtlConfig.CGIDIR, webqtlConfig.SCRIPTFILE), name='editHtml',submit=HT.Input(type='hidden'))
-			inputBox = HT.Textarea(name='htmlSrc', cols="100", rows=30,text=htmlCode)
-			
-			hddn = {'FormID':'editHtml', 'path':path, 'preview':''}
-			for key in hddn.keys():
-				form.append(HT.Input(name=key, value=hddn[key], type='hidden'))
-			previewButton = HT.Input(type='button',name='previewhtml', value='Preview',Class="button", onClick= "editHTML(this.form, 'preview');")
-			submitButton = HT.Input(type='button',name='submitchange', value='Submit Change',Class="button", onClick= "editHTML(this.form, 'submit');")
-			resetButton = HT.Input(type='reset',Class="button")
-			form.append(HT.Center(inputBox, HT.P(), previewButton, submitButton, resetButton))
-			
-			TD_LR = HT.TD(valign="top",colspan=2,bgcolor="#eeeeee")
-			mainTitle = HT.Paragraph("Edit HTML", Class="title")
-			intro = HT.Blockquote("You may edit the HTML source code in the editbox below, or you can copy the content of the editbox to your favorite HTML editor. ")
-			imgUpload = HT.Href(url="javascript:openNewWin('/upload.html', 'menubar=0,toolbar=0,location=0,resizable=0,status=1,scrollbars=1,height=400, width=600');", text="here", Class="fs14")
-			intro2 = HT.Blockquote("Click ", imgUpload, " to upload Images. ")
-			TD_LR.append(mainTitle, intro, intro2, HT.Center(form))
-			self.dict['body'] = TD_LR
-		else:
-			heading = "Editing HTML"
-			detail = ["Error occured while trying to edit the html file."]
-			self.error(heading=heading,detail=detail,error="Error")
-			return
-