Removed everything from 'web' directory except genofiles and renamed the directory to 'genotype_files'

1 files changed, 0 insertions, 130 deletions

diff --git a/web/webqtl/management/managerMainPage.py b/web/webqtl/management/managerMainPage.py
deleted file mode 100755
index 36f744ad..00000000
--- a/web/webqtl/management/managerMainPage.py
+++ /dev/null
@@ -1,130 +0,0 @@
-# Copyright (C) University of Tennessee Health Science Center, Memphis, TN.
-#
-# This program is free software: you can redistribute it and/or modify it
-# under the terms of the GNU Affero General Public License
-# as published by the Free Software Foundation, either version 3 of the
-# License, or (at your option) any later version.
-#
-# This program is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
-# See the GNU Affero General Public License for more details.
-#
-# This program is available from Source Forge: at GeneNetwork Project
-# (sourceforge.net/projects/genenetwork/).
-#
-# Contact Drs. Robert W. Williams and Xiaodong Zhou (2010)
-# at rwilliams@uthsc.edu and xzhou15@uthsc.edu
-#
-#
-#
-# This module is used by GeneNetwork project (www.genenetwork.org)
-#
-# Created by GeneNetwork Core Team 2010/08/10
-#
-# Last updated by GeneNetwork Core Team 2010/10/20
-
-import os
-
-from htmlgen import HTMLgen2 as HT
-
-from base.templatePage import templatePage
-from utility import webqtlUtil
-from base import webqtlConfig
-
-#XZ, 02/06/2009: Xiaodong created this class
-class managerMainPage(templatePage):
-
-    def __init__(self, fd):
-
-        templatePage.__init__(self, fd)
-
-        if not self.openMysql():
-            return
-
-        ifVerified = None
-
-        ifVerified = fd.formdata.getvalue('ifVerified')
-
-        if ifVerified != 'GN@UTHSC':
-            user = fd.formdata.getvalue('user')
-            password = fd.formdata.getvalue('password')
-            privilege, user_id, userExist = webqtlUtil.authUser(user,password,self.cursor,encrypt = None)[:3]
-
-            if userExist and webqtlConfig.USERDICT[privilege] >= webqtlConfig.USERDICT['admin']:
-                ifVerified = True
-
-
-        if not ifVerified:
-            heading = "Error page"
-            detail = ["You do not have privilege to change system configuration."]
-            self.error(heading=heading,detail=detail)
-            return
-	else:
-            TD_LR = HT.TD(height=200,width="100%", bgColor='#eeeeee')
-            
-            heading = "Please click button to make your selection"
-
-            createUserAccountForm = HT.Form(cgi= os.path.join(webqtlConfig.CGIDIR, webqtlConfig.SCRIPTFILE), enctype='multipart/form-data', name='createUserAccountForm', submit=HT.Input(type='hidden'))
-            createUserAccountForm.append(
-                HT.Input(type='button', name='', value='Manage User Accounts', Class="button", onClick="submitToNewWindow(this.form);"),
-                HT.Input(type='hidden',name='FormID',value='createUserAccount'),
-                HT.Input(type='hidden',name='ifVerified',value='GN@UTHSC')
-            )
-
-            assignUserToDatasetForm = HT.Form(cgi= os.path.join(webqtlConfig.CGIDIR, webqtlConfig.SCRIPTFILE), enctype='multipart/form-data', name='assignUserToDatasetForm', submit=HT.Input(type='hidden'))
-            assignUserToDatasetForm.append(
-                HT.Input(type='button', name='', value='Manage Confidential Datasets', Class="button", onClick="submitToNewWindow(this.form);"),
-                HT.Input(type='hidden',name='FormID',value='assignUserToDataset'),
-                HT.Input(type='hidden',name='ifVerified',value='GN@UTHSC')
-            )
-
-            deletePhenotypeTraitForm = HT.Form(cgi= os.path.join(webqtlConfig.CGIDIR, webqtlConfig.SCRIPTFILE), enctype='multipart/form-data', name='deletePhenotypeTraitForm', submit=HT.Input(type='hidden'))
-            deletePhenotypeTraitForm.append(
-                HT.Input(type='button', name='', value='Delete Phenotype Trait', Class="button", onClick="submitToNewWindow(this.form);"),
-                HT.Input(type='hidden',name='FormID',value='deletePhenotypeTrait'),
-                HT.Input(type='hidden',name='ifVerified',value='GN@UTHSC'),
-                HT.Input(type='hidden',name='status',value='input')
-            )
-
-            exportPhenotypeDatasetForm = HT.Form(cgi= os.path.join(webqtlConfig.CGIDIR, webqtlConfig.SCRIPTFILE), enctype='multipart/form-data', name='exportPhenotypeDatasetForm', submit=HT.Input(type='hidden'))
-            exportPhenotypeDatasetForm.append(
-                HT.Input(type='button', name='', value='Export Phenotype Dataset', Class="button", onClick="submitToNewWindow(this.form);"),
-                HT.Input(type='hidden',name='FormID',value='exportPhenotypeDataset'),
-                HT.Input(type='hidden',name='ifVerified',value='GN@UTHSC'),
-                HT.Input(type='hidden',name='status',value='input')
-            )
-
-            updateGenotypeForm = HT.Form(cgi= os.path.join(webqtlConfig.CGIDIR, webqtlConfig.SCRIPTFILE), enctype='multipart/form-data', name='updateGenotypeForm', submit=HT.Input(type='hidden'))
-            updateGenotypeForm.append(
-                HT.Input(type='button', name='', value='Update Genotype', Class="button", onClick="submitToNewWindow(this.form);"),
-                HT.Input(type='hidden',name='FormID',value='updGeno'),
-                HT.Input(type='hidden',name='ifVerified',value='GN@UTHSC')
-            )
-
-            editHeaderForm = HT.Form(cgi= os.path.join(webqtlConfig.CGIDIR, webqtlConfig.SCRIPTFILE), enctype='multipart/form-data', name='editHeaderForm', submit=HT.Input(type='hidden'))
-            editHeaderForm.append(
-                HT.Input(type='button', name='', value='Edit Header', Class="button", onClick="submitToNewWindow(this.form);"),
-		HT.Input(type='hidden', name='FormID', value='editHeaderFooter'),
-		HT.Input(type='hidden', name='hf', value='h'),
-            )
-
-            editFooterForm = HT.Form(cgi= os.path.join(webqtlConfig.CGIDIR, webqtlConfig.SCRIPTFILE), enctype='multipart/form-data', name='editFooterForm', submit=HT.Input(type='hidden'))
-            editFooterForm.append(
-                HT.Input(type='button', name='', value='Edit Footer', Class="button", onClick="submitToNewWindow(this.form);"),
-                HT.Input(type='hidden', name='FormID', value='editHeaderFooter'),
-		HT.Input(type='hidden', name='hf', value='f'),
-            )
-
-            TD_LR.append(heading, HT.P(),HT.P(), 
-			createUserAccountForm, HT.P(),HT.P(), 
-			assignUserToDatasetForm, HT.P(),HT.P(), 
-			deletePhenotypeTraitForm, HT.P(),HT.P(), 
-			exportPhenotypeDatasetForm, HT.P(),HT.P(),
-                        updateGenotypeForm, HT.P(),HT.P(),
-			editHeaderForm, HT.P(),HT.P(),
-			editFooterForm)
-
-            self.dict['body'] =  str(TD_LR)
-            self.dict['title'] =  'Manager Main Page'
-