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authorroot2012-05-08 18:39:56 -0500
committerroot2012-05-08 18:39:56 -0500
commitea46f42ee640928b92947bfb204c41a482d80937 (patch)
tree9b27a4eb852d12539b543c3efee9d2a47ef470f3 /web/webqtl/collection/RemoveSelectionPage.py
parent056b5253fc3857b0444382aa39944f6344dc1ceb (diff)
downloadgenenetwork2-ea46f42ee640928b92947bfb204c41a482d80937.tar.gz
Add all the source codes into the github.
Diffstat (limited to 'web/webqtl/collection/RemoveSelectionPage.py')
-rwxr-xr-xweb/webqtl/collection/RemoveSelectionPage.py108
1 files changed, 108 insertions, 0 deletions
diff --git a/web/webqtl/collection/RemoveSelectionPage.py b/web/webqtl/collection/RemoveSelectionPage.py
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+# Copyright (C) University of Tennessee Health Science Center, Memphis, TN.
+#
+# This program is free software: you can redistribute it and/or modify it
+# under the terms of the GNU Affero General Public License
+# as published by the Free Software Foundation, either version 3 of the
+# License, or (at your option) any later version.
+#
+# This program is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
+# See the GNU Affero General Public License for more details.
+#
+# This program is available from Source Forge: at GeneNetwork Project
+# (sourceforge.net/projects/genenetwork/).
+#
+# Contact Drs. Robert W. Williams and Xiaodong Zhou (2010)
+# at rwilliams@uthsc.edu and xzhou15@uthsc.edu
+#
+#
+#
+# This module is used by GeneNetwork project (www.genenetwork.org)
+#
+# Created by GeneNetwork Core Team 2010/08/10
+#
+# Last updated by GeneNetwork Core Team 2010/10/20
+
+
+
+import string
+
+from base.templatePage import templatePage
+from base.webqtlTrait import webqtlTrait
+from AddToSelectionPage import AddToSelectionPage
+
+#########################################
+# Remove Selection Page
+#########################################
+class RemoveSelectionPage(AddToSelectionPage):
+
+ def __init__(self, fd):
+
+ templatePage.__init__(self, fd)
+
+ if not self.openMysql():
+ return
+
+ if not fd.genotype:
+ fd.readGenotype()
+
+ self.searchResult = fd.formdata.getvalue('searchResult')
+ if self.searchResult:
+ pass
+ else:
+ templatePage.__init__(self, fd)
+ heading = 'Remove Selections'
+ detail = ['You need to select at least one trait to remove from your selection.']
+ self.error(heading=heading,detail=detail)
+ return
+
+ self.genSelection(fd=fd)
+ self.writeHTML(fd)
+
+
+
+ def genSelection(self, fd=None):
+ collectionName = '%s_Select' % fd.RISet
+
+ try:
+ preSelection = fd.input_session_data[collectionName]
+ preSelection = list(string.split(preSelection,','))
+ except:
+ preSelection = []
+
+ if type("1") == type(self.searchResult):
+ self.searchResult = [self.searchResult]
+
+ if preSelection:
+ for item in self.searchResult:
+ try:
+ preSelection.remove(item)
+ except:
+ pass
+ self.searchResult = preSelection[:]
+
+ if not self.searchResult:
+ self.session_data_changed[collectionName] = ""
+ return
+
+ #self.searchResult.sort()
+ for item in self.searchResult:
+ if not item:
+ self.searchResult.remove(item)
+
+ searchResult2 = []
+ self.theseTraits = []
+ for item in self.searchResult:
+ try:
+ thisTrait = webqtlTrait(fullname=item, cursor=self.cursor)
+ thisTrait.retrieveInfo(QTL=1)
+ self.theseTraits.append(thisTrait)
+ searchResult2.append(item)
+ except:
+ pass
+
+ allTraitStr = string.join(searchResult2,',')
+
+ self.session_data_changed[collectionName] = allTraitStr
+