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authorZachary Sloan2013-01-11 23:59:41 +0000
committerZachary Sloan2013-01-11 23:59:41 +0000
commit2b2970d167c5b555e0e0ad0b34b72f817c1fac91 (patch)
tree36fa8c708138fff03593e0f50cc933bcb62b5592 /web/webqtl/base/webqtlTrait.py
parent1db9237a05fd27c80dc963db9916072594156198 (diff)
parentd39b691994a395c45fa242de6d64d12a5470af10 (diff)
downloadgenenetwork2-2b2970d167c5b555e0e0ad0b34b72f817c1fac91.tar.gz
Merge branch 'flask' of http://github.com/zsloan/genenetwork
Diffstat (limited to 'web/webqtl/base/webqtlTrait.py')
-rw-r--r--web/webqtl/base/webqtlTrait.py9
1 files changed, 9 insertions, 0 deletions
diff --git a/web/webqtl/base/webqtlTrait.py b/web/webqtl/base/webqtlTrait.py
index f5051e45..2469504f 100644
--- a/web/webqtl/base/webqtlTrait.py
+++ b/web/webqtl/base/webqtlTrait.py
@@ -9,6 +9,10 @@ from dbFunction import webqtlDatabaseFunction
from utility import webqtlUtil
+from __future__ import print_function, division
+
+from pprint import pformat as pf
+
class webqtlTrait:
"""
Trait class defines a trait in webqtl, can be either Microarray,
@@ -215,6 +219,9 @@ class webqtlTrait:
def retrieveData(self, strainlist=[]):
assert self.db and self.cursor
+ debug_file = open("/home/zas1024/gn/web/traitlist_debug.txt", "w")
+ debug_file.write("strianlist is:" + strainlist + "\n")
+
if self.db.type == 'Temp':
query = '''
SELECT
@@ -341,6 +348,8 @@ class webqtlTrait:
#end if
else:
pass
+
+ debug_file.write("self.data is:", pf(self.data) + "\n")
def keys(self):
return self.__dict__.keys()