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authorzsloan2015-03-27 20:28:51 +0000
committerzsloan2015-03-27 20:28:51 +0000
commitd0911a04958a04042da02a334ccc528dae79cc17 (patch)
tree3c48e2e937c1dbeaf00a5697c87ed251afa5c8f1 /web/webqtl/base/admin.py
parenta840ad18e1fe3db98a359a159e9b9b72367a2839 (diff)
downloadgenenetwork2-d0911a04958a04042da02a334ccc528dae79cc17.tar.gz
Removed everything from 'web' directory except genofiles and renamed the directory to 'genotype_files'
Diffstat (limited to 'web/webqtl/base/admin.py')
-rwxr-xr-xweb/webqtl/base/admin.py88
1 files changed, 0 insertions, 88 deletions
diff --git a/web/webqtl/base/admin.py b/web/webqtl/base/admin.py
deleted file mode 100755
index a04df2da..00000000
--- a/web/webqtl/base/admin.py
+++ /dev/null
@@ -1,88 +0,0 @@
-# Copyright (C) University of Tennessee Health Science Center, Memphis, TN.
-#
-# This program is free software: you can redistribute it and/or modify it
-# under the terms of the GNU Affero General Public License
-# as published by the Free Software Foundation, either version 3 of the
-# License, or (at your option) any later version.
-#
-# This program is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
-# See the GNU Affero General Public License for more details.
-#
-# This program is available from Source Forge: at GeneNetwork Project
-# (sourceforge.net/projects/genenetwork/).
-#
-# Contact Drs. Robert W. Williams and Xiaodong Zhou (2010)
-# at rwilliams@uthsc.edu and xzhou15@uthsc.edu
-#
-#
-#
-# This module is used by GeneNetwork project (www.genenetwork.org)
-#
-# Created by GeneNetwork Core Team 2010/08/10
-#
-# Last updated by GeneNetwork Core Team 2010/10/20
-
-
-
-
-
-#XZ, 04/02/2009: we should put this into database.
-
-
-###LIST of databases used into gene name query
-
-
-ADMIN_search_dbs = {
- 'rat': {'PERITONEAL FAT': ['FT_2A_0605_Rz'],
- 'KIDNEY': ['KI_2A_0405_Rz'],
- 'ADRENAL GLAND': ['HXB_Adrenal_1208'],
- 'HEART': ['HXB_Heart_1208']
- },
- 'mouse': {'CEREBELLUM': ['CB_M_0305_R'],
- 'STRIATUM': ['SA_M2_0905_R', 'SA_M2_0405_RC', 'UTHSC_1107_RankInv', 'Striatum_Exon_0209'],
- 'HIPPOCAMPUS': ['HC_M2_0606_R', 'UMUTAffyExon_0209_RMA'],
- 'WHOLE BRAIN': ['BR_M2_1106_R', 'IBR_M_0106_R', 'BRF2_M_0805_R', 'UCLA_BHF2_BRAIN_0605'],
- 'LIVER': ['LV_G_0106_B', 'UCLA_BHF2_LIVER_0605'],
- 'EYE': ['Eye_M2_0908_R'],
- 'HEMATOPOIETIC STEM CELLS': ['HC_U_0304_R'],
- 'KIDNEY': ['MA_M2_0806_R'],
- 'MAMMARY TUMORS': ['MA_M_0704_R', 'NCI_Agil_Mam_Tum_RMA_0409'],
- 'PREFRONTAL CORTEX': ['VCUSal_1206_R'],
- 'SPLEEN': ['IoP_SPL_RMA_0509'],
- 'NUCLEUS ACCUMBENS': ['VCUSalo_1007_R'],
- 'NEOCORTEX': ['HQFNeoc_0208_RankInv'],
- 'ADIPOSE': ['UCLA_BHF2_ADIPOSE_0605'],
- 'RETINA': ['Illum_Retina_BXD_RankInv0410']
- },
- 'human': {
- 'LYMPHOBLAST B CELL': ['Human_1008', 'UT_CEPH_RankInv0909'],
- 'WHOLE BRAIN': ['GSE5281_F_RMA0709', 'GSE15222_F_RI_0409']
- }
- }
-
-
-###LIST of tissue alias
-
-ADMIN_tissue_alias = {'CEREBELLUM': ['Cb'],
- 'STRIATUM': ['Str'],
- 'HIPPOCAMPUS': ['Hip'],
- 'WHOLE BRAIN': ['Brn'],
- 'LIVER': ['Liv'],
- 'EYE': ['Eye'],
- 'PERITONEAL FAT': ['Fat'],
- 'HEMATOPOIETIC STEM CELLS': ['Hsc'],
- 'KIDNEY': ['Kid'],
- 'ADRENAL GLAND': ['Adr'],
- 'HEART': ['Hea'],
- 'MAMMARY TUMORS': ['Mam'],
- 'PREFRONTAL CORTEX': ['Pfc'],
- 'SPLEEN': ['Spl'],
- 'NUCLEUS ACCUMBENS': ['Nac'],
- 'NEOCORTEX': ['Ctx'],
- 'ADIPOSE': ['Wfat'],
- 'RETINA': ['Ret']
- }
-
-