Add all the source codes into the github.

author: root 2012-05-08 18:39:56 -0500
committer: root 2012-05-08 18:39:56 -0500
commit: ea46f42ee640928b92947bfb204c41a482d80937 (patch)
tree: 9b27a4eb852d12539b543c3efee9d2a47ef470f3 /web/tutorial/ppt
parent: 056b5253fc3857b0444382aa39944f6344dc1ceb (diff)
download: genenetwork2-ea46f42ee640928b92947bfb204c41a482d80937.tar.gz
857 files changed, 24022 insertions, 0 deletions
diff --git a/web/tutorial/ppt/WebQTLDemo.htm b/web/tutorial/ppt/WebQTLDemo.htm
new file mode 100755
index 00000000..5a051690
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo.htm
@@ -0,0 +1,4 @@
+<html>
+<head>
+<meta name=Title
+content="PowerPoint Presentation  -  Complex trait analysis, develop-ment, and genomics">
+<meta name=Keywords content=OPA>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link rel=Edit-Time-Data href="WebQTLDemo_files/editdata.mso">
+<link rel=OLE-Object-Data href="WebQTLDemo_files/oledata.mso">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="WebQTLDemo_files/WebQTLDemo.ppt">
+<meta http-equiv=expires content=0>
+<script language=JavaScript src="WebQTLDemo_files/script.js"></script><script language=JavaScript><!--
+LoadHTMLVersion();
+ if (g_ShowFSDefault ) FullScreen();//-->
+</script>
+</head>
+<frameset rows="*,35" framespacing=1 frameborder=1>
+ <noframes>
+  <body>
+  <p>This page uses frames, but your browser doesn't support them.</p>
+  </body>
+ </noframes>
+ <frame src="WebQTLDemo_files/frame.htm" name=MainFrame marginheight=0
+ marginwidth=0>
+ <frameset cols="20%,*">
+  <frame src="WebQTLDemo_files/outline_navigation_bar.htm" name=PPTOtlNav
+  marginheight=0 marginwidth=0 scrolling=no noresize>
+  <frame src="WebQTLDemo_files/navigation_bar.htm" name=PPTNav marginheight=0
+  marginwidth=0 scrolling=no noresize>
+ </frameset>
+</frameset>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/Slide0001.gif b/web/tutorial/ppt/WebQTLDemo_files/Slide0001.gif
new file mode 100755
index 00000000..f49994ae
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/Slide0001.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/Slide0002.gif b/web/tutorial/ppt/WebQTLDemo_files/Slide0002.gif
new file mode 100755
index 00000000..465b850a
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/Slide0002.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/Slide0003.gif b/web/tutorial/ppt/WebQTLDemo_files/Slide0003.gif
new file mode 100755
index 00000000..2969e2d0
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/Slide0003.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/Slide0004.gif b/web/tutorial/ppt/WebQTLDemo_files/Slide0004.gif
new file mode 100755
index 00000000..8540ad6e
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/Slide0004.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/Slide0005.gif b/web/tutorial/ppt/WebQTLDemo_files/Slide0005.gif
new file mode 100755
index 00000000..d4f645d5
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/Slide0005.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/Slide0006.gif b/web/tutorial/ppt/WebQTLDemo_files/Slide0006.gif
new file mode 100755
index 00000000..3fd598cf
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/Slide0006.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/Slide0007.gif b/web/tutorial/ppt/WebQTLDemo_files/Slide0007.gif
new file mode 100755
index 00000000..902fa4e5
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/Slide0007.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/Slide0008.gif b/web/tutorial/ppt/WebQTLDemo_files/Slide0008.gif
new file mode 100755
index 00000000..764c9443
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/Slide0008.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/Slide0009.gif b/web/tutorial/ppt/WebQTLDemo_files/Slide0009.gif
new file mode 100755
index 00000000..830d79f9
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/Slide0009.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/Slide0010.gif b/web/tutorial/ppt/WebQTLDemo_files/Slide0010.gif
new file mode 100755
index 00000000..b4fb0c35
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/Slide0010.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/Slide0011.gif b/web/tutorial/ppt/WebQTLDemo_files/Slide0011.gif
new file mode 100755
index 00000000..b8649d2d
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/Slide0011.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/Slide0012.gif b/web/tutorial/ppt/WebQTLDemo_files/Slide0012.gif
new file mode 100755
index 00000000..cbd840e5
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/Slide0012.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/Slide0013.gif b/web/tutorial/ppt/WebQTLDemo_files/Slide0013.gif
new file mode 100755
index 00000000..5c1a67e6
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/Slide0013.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/Slide0014.gif b/web/tutorial/ppt/WebQTLDemo_files/Slide0014.gif
new file mode 100755
index 00000000..59195304
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/Slide0014.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/Slide0015.gif b/web/tutorial/ppt/WebQTLDemo_files/Slide0015.gif
new file mode 100755
index 00000000..e8a34ab6
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/Slide0015.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/Slide0016.gif b/web/tutorial/ppt/WebQTLDemo_files/Slide0016.gif
new file mode 100755
index 00000000..2aaf9257
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/Slide0016.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/Slide0017.gif b/web/tutorial/ppt/WebQTLDemo_files/Slide0017.gif
new file mode 100755
index 00000000..6088d820
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/Slide0017.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/Slide0018.gif b/web/tutorial/ppt/WebQTLDemo_files/Slide0018.gif
new file mode 100755
index 00000000..41461ffa
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/Slide0018.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/Slide0019.gif b/web/tutorial/ppt/WebQTLDemo_files/Slide0019.gif
new file mode 100755
index 00000000..b7cbcf23
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/Slide0019.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/Slide0020.gif b/web/tutorial/ppt/WebQTLDemo_files/Slide0020.gif
new file mode 100755
index 00000000..62fc5b89
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/Slide0020.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/Slide0021.gif b/web/tutorial/ppt/WebQTLDemo_files/Slide0021.gif
new file mode 100755
index 00000000..31ad83dc
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/Slide0021.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/Slide0022.gif b/web/tutorial/ppt/WebQTLDemo_files/Slide0022.gif
new file mode 100755
index 00000000..11d20f06
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/Slide0022.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/Slide0023.gif b/web/tutorial/ppt/WebQTLDemo_files/Slide0023.gif
new file mode 100755
index 00000000..8e943fd9
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/Slide0023.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/Slide0024.gif b/web/tutorial/ppt/WebQTLDemo_files/Slide0024.gif
new file mode 100755
index 00000000..0e11714e
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/Slide0024.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/Slide0025.gif b/web/tutorial/ppt/WebQTLDemo_files/Slide0025.gif
new file mode 100755
index 00000000..1e2a8211
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/Slide0025.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/Slide0026.gif b/web/tutorial/ppt/WebQTLDemo_files/Slide0026.gif
new file mode 100755
index 00000000..49efcb1c
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/Slide0026.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/Slide0027.gif b/web/tutorial/ppt/WebQTLDemo_files/Slide0027.gif
new file mode 100755
index 00000000..e7e82345
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new file mode 100755
index 00000000..03fd8a8b
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+++ b/web/tutorial/ppt/WebQTLDemo_files/Slide0028.gif
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new file mode 100755
index 00000000..fb7e212c
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/Slide0030.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/Slide0031.gif b/web/tutorial/ppt/WebQTLDemo_files/Slide0031.gif
new file mode 100755
index 00000000..45444e82
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/Slide0031.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/Slide0032.gif b/web/tutorial/ppt/WebQTLDemo_files/Slide0032.gif
new file mode 100755
index 00000000..8b0bd5a9
--- /dev/null
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diff --git a/web/tutorial/ppt/WebQTLDemo_files/WebQTLDemo.ppt b/web/tutorial/ppt/WebQTLDemo_files/WebQTLDemo.ppt
new file mode 100755
index 00000000..33fbac82
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/WebQTLDemo.ppt
diff --git a/web/tutorial/ppt/WebQTLDemo_files/blank_notes.htm b/web/tutorial/ppt/WebQTLDemo_files/blank_notes.htm
new file mode 100755
index 00000000..316e6a9e
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/blank_notes.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black topmargin=0 leftmargin=0>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/endshow.htm b/web/tutorial/ppt/WebQTLDemo_files/endshow.htm
new file mode 100755
index 00000000..b7b94eb3
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/endshow.htm
@@ -0,0 +1 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+</head>
+<body bgcolor=black>
+<center>
+<p><font face=Arial color=white size=2><br>
+<b>Open the default .htm file to view this Web presentation.</b></font></p>
+</center>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/error.htm b/web/tutorial/ppt/WebQTLDemo_files/error.htm
new file mode 100755
index 00000000..a8ed4372
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/error.htm
@@ -0,0 +1 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+</head>
+<body bgcolor=black>
+<center>
+<p><font face=Arial color=white size=2><br>
+<b>This presentation contains content that your browser is unable to display. This presentation was optimized for the recent version of Microsoft Internet Explorer and the recent version of Netscape Navigator.</b></font></p>
+</center>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/filelist.xml b/web/tutorial/ppt/WebQTLDemo_files/filelist.xml
new file mode 100755
index 00000000..1558f6f7
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/filelist.xml
@@ -0,0 +1 @@
+<xml xmlns:o="urn:schemas-microsoft-com:office:office">
+ <o:File HRef="master03.htm"/>
+ <o:File HRef="master05.htm"/>
+ <o:File HRef="master02.htm"/>
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new file mode 100755
index 00000000..d3e83474
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/navigation_bar.htm
@@ -0,0 +1,91 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<script>
+<!--
+function restore() {
+if( navigator.platform != "MacPPC" )
+	self.location.reload();
+}
+
+function WriteBody()
+{
+  if( window.name != "PPTNav" ) return;
+
+  document.writeln( '<table width=\"100%\" border=0 valign=top cellpadding=0 cellspacing=0> <tr> ' );
+  drawing_app = false;
+  if ( parent.includeNotes && !false  ) {
+  	
+  		document.write( '<td align=left><a href=\"javascript:parent.ShowHideNotes()\">' + 
+  		' <img src=\"notes_flag.gif\" border=0  title=\"  Notes\" alt=\"  Notes\">' + ' </a> </td>  ' );
+  		
+  }
+  	document.write( '<td align=center valign=top> <table border=0 valign=top cellpadding=0 cellspacing=0> <tr><td align=right>' );
+
+  innerText = "";
+  if ( parent.GetHrefObj( parent.g_currentSlide ).m_origVisibility == 1 && !parent.g_allHidden )
+    innerText = "Slide " + parent.GetCurrentSlideNum() + " of " + parent.GetNumSlides();
+  else
+    innerText = "Hidden Slide";
+
+ if ( drawing_app ) {
+ 	    document.write( '<a href=\"javascript:parent.GoToFirst()\">' );
+ 	    document.write( '<img src="prev_active.gif"></a> &nbsp &nbsp &nbsp &nbsp' );
+ }
+
+  fEnable = ( ( parent.g_currentSlide != 1 && parent.GetHrefObj( parent.g_currentSlide - 1 ).m_visibility == 1 ) ) ||
+		( parent.GetCurrentSlideNum() > 1 );
+
+  if( fEnable )
+  {
+    prevBtn = "prev_active.gif";
+    document.write( '<a href=\"javascript:parent.TP_GoToPrevSld()\">' );
+  }
+  else
+    prevBtn = "prev_disabled.gif";
+  
+ document.write( '<img src="' + prevBtn + '" border=0 title="Previous Slide" alt="Previous Slide" >' );
+ 
+  if( fEnable )
+    document.write( '</a>' );
+
+ document.write( '</td> <td align=center> ')
+  document.write( ' &nbsp &nbsp <font face=\"Arial\" color=#000000 size=2>' + innerText + '</font>  &nbsp &nbsp ' );
+ document.write( '</td> <td align=left>' );
+
+  fEnable = ( parent.GetCurrentSlideNum() != parent.GetNumSlides() );
+  if( fEnable )
+  {
+    nextBtn = "next_active.gif";
+    document.write( '<a href=\"javascript:parent.TP_GoToNextSld()\">' );
+  }
+  else
+    nextBtn = "next_disabled.gif";
+  
+document.write( '<img src="' + nextBtn + '" border=0 title="Next Slide" alt="Next Slide">' );
+
+  if( fEnable )
+    document.write( '</a>' );
+ if ( drawing_app ) {
+ 	    document.write( ' &nbsp &nbsp &nbsp &nbsp<a href=\"javascript:parent.GoToLast()\">' );
+ 	    document.write( '<img src="next_active.gif"></a>' );
+ }
+
+
+  document.write( '</td> </tr></table>' );
+
+  if ( ! drawing_app && !false ) {
+  	document.write( '</td>  <td align=right valign=top>' );
+  	document.write( '<a href=\"javascript:parent.FullScreen()\"> ' +
+  	'<img src="fullscr.gif" border=0 title="Full Screen Slide Show" alt="Full Screen Slide Show">' + 
+  	'</a>' );
+ }
+  document.write( '</td> </tr></table>' );
+}
+//-->
+</script>
+
+</head>
+<body background=navbg.gif topmargin=2 scroll="no"  onresize="restore()">
+<center><script language=JavaScript><!--
+WriteBody();//-->
+</script></center>
+</body>
+</html>
+\ No newline at end of file
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new file mode 100755
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new file mode 100755
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new file mode 100755
index 00000000..d680812c
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/outline_collapsed.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Robots content=NoIndex>
+<style>
+<!--a {text-decoration: none;}-->
+</style>
+</head>
+<body bgcolor=black text=white link=white vlink=white alink=white
+onload=" parent.base.highlite();" onresize="self.location.reload();">
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID1 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p1" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('1')" id=AREF>WebQTL Demonstration
+  One<br>
+  please link to <br>
+  www.webqtl.org/search.html</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID2 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p2" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('2')" id=AREF>&quot;or
+  webqtl.org/search.html...&quot;</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID3 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p3" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('3')" id=AREF>Search results</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID4 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p4" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('4')" id=AREF>&quot;First page of data:&quot;</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID5 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p5" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('5')" id=AREF>&quot;Data sources:&quot;</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID6 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p6" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('6')" id=AREF>&quot;Return to Trait Data
+  page&quot;</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID7 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p7" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('7')" id=AREF>&quot;Discovering shared
+  expression patterns&quot;</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID8 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p8" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('8')" id=AREF>&quot;The App transcript
+  neighborhood&quot;</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID9 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p9" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('9')" id=AREF>&quot;Handdrawn sketch of
+  the neighborhood&quot;</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID10 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p10" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('10')" id=AREF>&quot;What a network is
+  likely...&quot;</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID11 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p11" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('11')" id=AREF>Are there experimental
+  results to corroborate a link between App with Hsp84-1?</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID12 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p12" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('12')" id=AREF>&quot;2.45 billion scatter
+  plots&quot;</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID13 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p13" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('13')" id=AREF>&quot;Cross-tissue type
+  correlations&quot;</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID14 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p14" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('14')" id=AREF>&quot;Cross-modal
+  correlations:&quot;</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID15 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p15" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('15')" id=AREF>WebQTL<span
+  style="mso-spacerun: yes">&nbsp;&nbsp;&nbsp; </span><br>
+  link to <br>
+  www.webqtl.org/search.html</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID16 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p16" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('16')" id=AREF>Slide 16</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID17 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p17" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('17')" id=AREF>Slide 17</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID18 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p18" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('18')" id=AREF>WebQTL to exploring
+  upstream control</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID19 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p19" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('19')" id=AREF>WebQTL to exploring
+  upstream control.</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID20 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p20" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('20')" id=AREF>The whole neighborhood is
+  modulated!</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID21 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p21" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('21')" id=AREF>Which gene is the QTL?</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID22 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p22" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('22')" id=AREF>Slide 22</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID23 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p23" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('23')" id=AREF>Slide 23</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID24 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p24" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('24')" id=AREF>Tissue differences in probe
+  performance</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID25 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p25" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('25')" id=AREF>Is there known biology to
+  link Hars2 with App?</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID26 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p26" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('26')" id=AREF>WebQTL<span
+  style="mso-spacerun: yes">&nbsp;&nbsp;&nbsp; </span><br>
+  link to <br>
+  www.webqtl.org/search.html</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID27 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p27" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('27')" id=AREF>Requirement: The gene must
+  be polymorphic to be genetically �upstream�</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID28 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p28" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('28')" id=AREF>Direct correlations between
+  genotypes and traits</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID29 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p29" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('29')" id=AREF>What�s downstream of Chr 2
+  near Hars2?</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID30 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p30" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('30')" id=AREF>What�s downstream of Chr 2
+  near Hars2?</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID31 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p31" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('31')" id=AREF>Does Hars2 correlate with
+  Actn2 strongly?</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID32 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p32" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('32')" id=AREF>Contact for comments and
+  improvements:</a></b></font></td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/outline_expand.gif b/web/tutorial/ppt/WebQTLDemo_files/outline_expand.gif
new file mode 100755
index 00000000..c8c72b13
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/outline_expand.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/outline_expanded.htm b/web/tutorial/ppt/WebQTLDemo_files/outline_expanded.htm
new file mode 100755
index 00000000..3e6bdf31
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/outline_expanded.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Robots content=NoIndex>
+<style>
+<!--a {text-decoration: none;}-->
+</style>
+</head>
+<body bgcolor=black text=white link=white vlink=white alink=white
+onload=" parent.base.highlite();" onresize="self.location.reload();">
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID1 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p1" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('1')" id=AREF>WebQTL Demonstration
+  One<br>
+  please link to <br>
+  www.webqtl.org/search.html</a></b></font></td>
+ </tr>
+</table>
+<table>
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>Part 1: How to discover shared
+  expression patterns (slides 2�14)</font></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>Part 2. Discovering upstream modulators
+  (15�25)</font></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>Discovering downstream targets</font></td>
+ </tr>
+</table>
+<br>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID2 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p2" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('2')" id=AREF>&quot;or
+  webqtl.org/search.html...&quot;</a></b></font></td>
+ </tr>
+</table>
+<table>
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>or webqtl.org/search.html (mirror)</font></td>
+ </tr>
+</table>
+<br>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID3 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p3" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('3')" id=AREF>Search results</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID4 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p4" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('4')" id=AREF>&quot;First page of data:&quot;</a></b></font></td>
+ </tr>
+</table>
+<table>
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>First page of data: The �Trait Data
+  Form�</font></td>
+ </tr>
+</table>
+<br>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID5 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p5" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('5')" id=AREF>&quot;Data sources:&quot;</a></b></font></td>
+ </tr>
+</table>
+<table>
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>Data sources: Phenotpyes and genotypes</font></td>
+ </tr>
+</table>
+<br>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID6 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p6" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('6')" id=AREF>&quot;Return to Trait Data
+  page&quot;</a></b></font></td>
+ </tr>
+</table>
+<table>
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>Return to Trait Data page</font></td>
+ </tr>
+</table>
+<br>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID7 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p7" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('7')" id=AREF>&quot;Discovering shared
+  expression patterns&quot;</a></b></font></td>
+ </tr>
+</table>
+<table>
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>Discovering shared expression patterns</font></td>
+ </tr>
+</table>
+<br>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID8 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p8" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('8')" id=AREF>&quot;The App transcript
+  neighborhood&quot;</a></b></font></td>
+ </tr>
+</table>
+<table>
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>The App transcript neighborhood</font></td>
+ </tr>
+</table>
+<br>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID9 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p9" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('9')" id=AREF>&quot;Handdrawn sketch of
+  the neighborhood&quot;</a></b></font></td>
+ </tr>
+</table>
+<table>
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>Handdrawn sketch of the neighborhood</font></td>
+ </tr>
+</table>
+<br>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID10 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p10" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('10')" id=AREF>&quot;What a network is
+  likely...&quot;</a></b></font></td>
+ </tr>
+</table>
+<table>
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>What a network is likely to look like
+  (but App will not be center of universe).</font></td>
+ </tr>
+</table>
+<br>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID11 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p11" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('11')" id=AREF>Are there experimental
+  results to corroborate a link between App with Hsp84-1?</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID12 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p12" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('12')" id=AREF>&quot;2.45 billion scatter
+  plots&quot;</a></b></font></td>
+ </tr>
+</table>
+<table>
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>2.45 billion scatter plots: here is one
+  of the best</font></td>
+ </tr>
+</table>
+<br>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID13 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p13" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('13')" id=AREF>&quot;Cross-tissue type
+  correlations&quot;</a></b></font></td>
+ </tr>
+</table>
+<table>
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>Cross-tissue type correlations</font></td>
+ </tr>
+</table>
+<br>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID14 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p14" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('14')" id=AREF>&quot;Cross-modal
+  correlations:&quot;</a></b></font></td>
+ </tr>
+</table>
+<table>
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>Cross-modal correlations: From mRNA to
+  to anatomy and to behavior and pharmacology</font></td>
+ </tr>
+</table>
+<br>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID15 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p15" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('15')" id=AREF>WebQTL<span
+  style="mso-spacerun: yes">&nbsp;&nbsp;&nbsp; </span><br>
+  link to <br>
+  www.webqtl.org/search.html</a></b></font></td>
+ </tr>
+</table>
+<table>
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>Discovering shared expression patterns</font></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>Discovering upstream modulators (QTLs)</font></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>Discovering downstream targets</font></td>
+ </tr>
+</table>
+<br>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID16 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p16" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('16')" id=AREF>Slide 16</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID17 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p17" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('17')" id=AREF>Slide 17</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID18 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p18" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('18')" id=AREF>WebQTL to exploring
+  upstream control</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID19 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p19" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('19')" id=AREF>WebQTL to exploring
+  upstream control.</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID20 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p20" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('20')" id=AREF>The whole neighborhood is
+  modulated!</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID21 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p21" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('21')" id=AREF>Which gene is the QTL?</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID22 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p22" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('22')" id=AREF>Slide 22</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID23 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p23" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('23')" id=AREF>Slide 23</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID24 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p24" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('24')" id=AREF>Tissue differences in probe
+  performance</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID25 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p25" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('25')" id=AREF>Is there known biology to
+  link Hars2 with App?</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID26 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p26" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('26')" id=AREF>WebQTL<span
+  style="mso-spacerun: yes">&nbsp;&nbsp;&nbsp; </span><br>
+  link to <br>
+  www.webqtl.org/search.html</a></b></font></td>
+ </tr>
+</table>
+<table>
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>Discovering shared expression patterns</font></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>Discovering upstream modulators (QTLs)</font></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>Discovering downstream targets</font></td>
+ </tr>
+</table>
+<br>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID27 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p27" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('27')" id=AREF>Requirement: The gene must
+  be polymorphic to be genetically �upstream�</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID28 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p28" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('28')" id=AREF>Direct correlations between
+  genotypes and traits</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID29 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p29" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('29')" id=AREF>What�s downstream of Chr 2
+  near Hars2?</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID30 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p30" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('30')" id=AREF>What�s downstream of Chr 2
+  near Hars2?</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID31 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p31" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('31')" id=AREF>Does Hars2 correlate with
+  Actn2 strongly?</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID32 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p32" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('32')" id=AREF>Contact for comments and
+  improvements:</a></b></font></td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
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+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script><script language=JavaScript><!--
+
+function restore() {
+if( navigator.platform != "MacPPC" )
+	self.location.reload();
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+
+function writebody() {
+
+	if ( parent.g_showoutline ) {
+			document.write('<table border=0 valign=top cellspacing=0 width=\"100%\">' + 
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+			  document.write( '<a href=\"javascript:parent.ToggleOutline()\" ><img src=\"outline.gif\" title=\"Show/Hide Outline\" alt=\"Show/Hide Outline\" border=0></a>' );
+			  document.write( '</td>' );
+		if( parent.g_outline_href == parent.OUTLINE_EXPAND_HREF ) {
+			document.write( '<td align=right valign=top><a href=\"javascript:parent.CollapseOutline()\">' +
+			'<img src="outline_collapse.gif" title="Collapse Outline" alt="Collapse Outline" border=0>' +  
+			'</a></td>');
+		} else {
+			document.write('<td align=right valign=top><a href=\"javascript:parent.ExpandOutline()\">' +
+			'<img src="outline_expand.gif" title="Expand Outline" alt="Expand Outline" border=0>' + 
+			 '</a></td>');
+		}
+		document.write("</tr></table>");
+	}
+	else {
+			document.write( '<table border=0 valign=top cellspacing=0 width=\"100%\"><td align=\"left\"><a href=\"javascript:parent.ToggleOutline()\" ><img border=0 src=\"outline.gif\" title=\"Show/Hide Outline\" alt=\"Show/Hide Outline\"></a></td></table>' );
+	}
+}//-->
+</script>
+</head>
+<body background=navbg.gif topmargin=1 onresize="restore()" scroll="no" >
+<script language=JavaScript><!--
+writebody();
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
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+++ b/web/tutorial/ppt/WebQTLDemo_files/script.js
@@ -0,0 +1,1379 @@
+var CtxAlwaysOn = false;
+function LoadSld( slideId )
+{
+	if( !g_supportsPPTHTML ) return
+	if( slideId )
+		parent.base.SldUpdated(slideId)
+	g_origSz=parseInt(SlideObj.style.fontSize)
+	g_origH=SlideObj.style.posHeight
+	g_origW=SlideObj.style.posWidth
+	g_scaleHyperlinks=(document.all.tags("AREA").length>0)
+	if ( IsWin("PPTSld") && !parent.IsFullScrMode() )
+		parent.base.highlite();	
+	if( g_scaleHyperlinks )
+		InitHLinkArray()
+	if( g_scaleInFrame||(IsWin("PPTSld") && parent.IsFullScrMode() ) )
+		document.body.scroll="no"
+	_RSW()
+	if( IsWin("PPTSld") && (parent.IsFullScrMode() || CtxAlwaysOn ) )	{
+		document.oncontextmenu=parent._CM;
+	self.focus(); 
+
+	}
+}
+function MakeSldVis( fTrans ) 
+{
+	fTrans=fTrans && g_showAnimation
+	if( fTrans )
+	{
+		if( g_bgSound ) {
+			idx=g_bgSound.indexOf(",");
+			pptSound.src=g_bgSound.substr( 0, idx );
+			pptSound.loop= -(parseInt(g_bgSound.substr(idx+1)));
+		}
+		SlideObj.filters.revealtrans.Apply()
+	}
+	SlideObj.style.visibility="visible"
+	if( fTrans )
+		SlideObj.filters.revealtrans.Play()
+}
+function MakeNotesVis() 
+{
+	if( !IsNts() ) return false 
+	SlideObj.style.display="none"
+	nObj = document.all.item("NotesObj")
+	parent.SetHasNts(0)
+	if( nObj ) { 
+		nObj.style.display=""
+		parent.SetHasNts(1)
+	}
+	return 1
+}
+function Redirect( frmId,sId )
+{
+	var str=document.location.hash,idx=str.indexOf('#')
+	if(idx>=0) str=str.substr(1);
+	if( window.name != frmId && ( sId != str) ) {
+		obj = document.all.item("Main-File")
+		window.location.href=obj.href+"#"+sId
+		return 1
+	}
+	return 0
+}
+function HideMenu() { if( frames["PPTSld"] && PPTSld.document.all.item("ctxtmenu") && PPTSld.ctxtmenu.style.display!="none" ) { PPTSld.ctxtmenu.style.display='none'; return true } return false }
+function IsWin( name ) { return window.name == name }
+function IsNts() { return IsWin("PPTNts") }
+function IsSldOrNts() { return( IsWin("PPTSld")||IsWin("PPTNts") ) }
+function SupportsPPTAnimation() { return( navigator.platform == "Win32" && navigator.appVersion.indexOf("Windows")>0 ) }
+function SupportsPPTHTML()
+{
+	var appVer=navigator.appVersion, msie=appVer.indexOf( "MSIE " ), inex = appVer.indexOf( "Internet Explorer " ), ver=0
+	if( msie >= 0 )
+		ver=parseFloat( appVer.substring( msie+5, appVer.indexOf(";",msie) ) )
+	else if( inex >= 0 )
+		ver=parseFloat( appVer.substring( inex+18, appVer.indexOf(";",inex) ) )
+	else
+		ver=parseInt(appVer)
+
+	return( ver >= 4  )
+}
+var MHTMLPrefix = CalculateMHTMLPrefix(); 
+function CalculateMHTMLPrefix()
+{
+	if ( document.location.protocol == 'mhtml:') { 
+		href=new String(document.location.href) 
+		Start=href.indexOf('!')+1 
+		End=href.lastIndexOf('/')+1 
+		if (End < Start) 
+			return href.substring(0, Start) 
+		else 
+		return href.substring(0, End) 
+	}
+	return '';
+}
+
+function LoadNavSld(slideId) {
+playList();
+parent.createCM();
+	if( !g_supportsPPTHTML ) return
+	if( IsWin("PPTSld") && slideId )
+		parent.base.SldUpdated(slideId)
+	self.focus(); 
+
+}
+var hasNarration = false;
+function _RSW()
+{
+	if( !g_supportsPPTHTML || IsNts() ||
+	  ( !g_scaleInFrame && (( window.name != "PPTSld" ) ) ) )
+		return
+
+	cltWidth=document.body.clientWidth
+	cltHeight=document.body.clientHeight
+	factor=(1.0*cltWidth)/g_origW
+	if( cltHeight < g_origH*factor )
+		factor=(1.0*cltHeight)/g_origH
+
+	newSize = g_origSz * factor
+	if( newSize < 1 ) newSize=1
+
+	s=SlideObj.style
+	s.fontSize=newSize+"px"
+	s.posWidth=g_origW*factor
+	s.posHeight=g_origH*factor
+	s.posLeft=(cltWidth-s.posWidth)/2
+	s.posTop=(cltHeight-s.posHeight)/2
+
+	if ( hasNarration ) {
+		obj = document.all.NSPlay.style;
+		mySld = document.all.SlideObj.style;
+		obj.position = 'absolute';
+		obj.posTop = mySld.posTop + mySld.posHeight - 20;
+		obj.posLeft = mySld.posLeft + mySld.posWidth - 20;
+	}
+	if( g_scaleHyperlinks )
+		ScaleHyperlinks( factor );	
+}
+function IsMac() {
+	return (window.navigator.platform.indexOf("Mac") >= 0 );
+}
+
+function HitOK( evt ) {
+	//Nav Only function
+	return (evt.which == 1 || (IsMac() && evt.which == 3) );
+}
+function _KPH(event)
+{ 
+
+  if ( parent.base.msie < 0 )  {
+    
+    	if ( ( (event.target.name && event.target.name == "hasMap" ) || (event.target.href && event.target.href != "") ) && parent.g_docTable[0].type != "jpeg" && HitOK( event )  ) {
+    		return; /* to make hyperlinks in fullscreen mode traversable */
+    	}
+	if( IsContextMenu() )
+		return parent.KPH(event);
+  	if ( parent.IsFullScrMode()  && event.which == 27 )
+  		parent.base.CloseFullScreen();
+  	else if ( parent.base.IsFullScrMode() && ( (!IsMac() && event.which == 3) || ( IsMac() && (event.modifiers & Event.CONTROL_MASK) && event.which == 1 ) ) )
+  		return parent.KPH(event);
+  	else if( (event.which == 32) ||  (event.which == 13) || HitOK( event )  ) {
+	    if( window.name == "PPTSld" )
+	      parent.PPTSld.DocumentOnClick();
+	    else
+	      parent.M_GoNextSld();
+      }	
+      else if ( parent.IsFullScrMode() && ((event.which == 78)  || (event.which == 110) || (event.which == 29) || (event.which == 31) || (event.which == 12)) )
+  		parent.M_GoNextSld();
+      else if ( parent.IsFullScrMode() && ( (event.which == 80)  || (event.which == 112) || (event.which == 30) || (event.which == 28) || (event.which == 11) || (event.which == 8)) )
+  		parent.M_GoPrevSld();
+
+      return;
+   }
+  	
+  if( IsNts() ) return;
+
+  if(parent.IsFullScrMode()  && event.keyCode == 27 && !parent.HideMenu() )
+    parent.base.CloseFullScreen();
+  else if( (event.keyCode == 32) || (event.keyCode == 13) )
+  {
+    if( window.name == "PPTSld" )
+      parent.PPTSld.DocumentOnClick();
+   else
+      parent.M_GoNextSld();
+  }
+  else if ( parent.IsFullScrMode() && ((event.keyCode == 78)  || (event.keyCode == 110)) )
+  	parent.M_GoNextSld();
+  else if ( parent.IsFullScrMode() && ((event.keyCode == 80)  || (event.keyCode == 112)) )
+  	parent.M_GoPrevSld();
+}
+
+function DocumentOnClick(event)
+{
+		if ( g_doAdvOnClick && !parent.IsFullScrMode() ) {
+			parent.base.TP_GoToNextSld();	
+			return;
+		}
+		
+	if ( parent.base.msie < 0 ) 
+	{
+		if( ( g_allowAdvOnClick  && parent.IsFullScrMode() ) || g_doAdvOnClick ||
+		    (event && ( (event.which == 32) || (event.which == 13) ) ) )
+			parent.M_GoNextSld();
+			return;
+	}		
+	if( IsNts() || (parent.IsFullScrMode() && parent.HideMenu() ) ) return;
+	if( ( g_allowAdvOnClick && parent.IsFullScrMode() ) || g_doAdvOnClick ||
+	    (event && ( (event.keyCode==32) || (event.keyCode == 13) ) ) )
+		parent.M_GoNextSld();
+}
+
+
+var g_supportsPPTHTML = SupportsPPTHTML(), g_scaleInFrame = true, gId="", g_bgSound="",
+    g_scaleHyperlinks = false, g_allowAdvOnClick = true, g_showInBrowser = false, g_doAdvOnClick = false;
+
+ var g_showAnimation = 0;
+var g_hasTrans = false, g_autoTrans = false, g_transSecs = 0;
+var g_animManager = null;
+
+var ENDSHOW_MESG="End of slide show, click to exit.", SCREEN_MODE="Frames", gIsEndShow=0, NUM_VIS_SLDS=32, SCRIPT_HREF="script.js", FULLSCR_HREF="fullscreen.htm";
+var gCurSld = gPrevSld = 1, g_offset = 0, gNtsOpen = gHasNts = gOtlTxtExp = gNarrationPaused = false, gOtlOpen = true
+window.gPPTHTML=SupportsPPTHTML()
+var g_hideNav = 0;
+function UpdNtsPane(){ PPTNts.location.replace( MHTMLPrefix+GetHrefObj( gCurSld ).mNtsHref ) }
+function UpdNavPane( sldIndex ){ if(gNavLoaded) PPTNav.UpdNav() }
+function UpdOtNavPane(){ if(gOtlNavLoaded) PPTOtlNav.UpdOtlNav() }
+function UpdOtlPane(){ if(gOtlLoaded) PPTOtl.UpdOtl() }
+function SetHasNts( fVal )
+{
+	if( gHasNts != fVal ) {
+		gHasNts=fVal
+		UpdNavPane()
+	}
+}
+
+function ToggleVNarration()
+{
+	if ( base.msie < 0 ) {
+		PPTSld.ToggleSound( false, PPTSld.document.NSPlay );
+		return;
+	}
+	
+	rObj=PPTSld.document.all("NSPlay")
+	if( rObj ) {
+		if( gNarrationPaused )
+			rObj.Play()
+		else
+			rObj.Pause()
+
+		gNarrationPaused=!gNarrationPaused
+	}
+}
+
+function PrevSldViewed(){ GoToSld( GetHrefObj(gPrevSld).mSldHref ) }
+function HasPrevSld() { return ( gIsEndShow || ( g_currentSlide != 1 && GetHrefObj( g_currentSlide-1 ).mVis == 1 )||( GetCurrentSlideNum() > 1 ) ) }
+function HasNextSld() { return (GetCurrentSlideNum() != GetNumSlides()) }
+function StartEndShow()
+{
+//	g_hideNav = 1;
+//	PPTNav.location.reload();
+	if( PPTSld.event ) PPTSld.event.cancelBubble=true
+
+	doc=PPTSld.document
+	doc.open()
+	doc.writeln('<html><head><script > /*defer>*/ g_ctxmenu = 0; ' +
+	'if( parent.base.msie < 0 )  { document.captureEvents(Event.KEYPRESS); document.captureEvents(Event.MOUSEDOWN); document.onkeypress = _KPH; document.onmousedown = _KPH; } ' +
+	'function DocumentOnClick(event) { return _KPH(event); }  function IsContextMenu() { return (g_ctxmenu ==1); } ' +
+	'function _KPH(event)' +
+	'{  ' +
+	'if ( parent.base.msie < 0  && (parent.IsFullScrMode() ) && event ) { if ( (!parent.IsMac() && event.which == 3) || ( parent.IsMac() && (event.modifiers & Event.CONTROL_MASK) && event.which == 1 ) )  { return parent.KPH(event); } ' + 
+	' else if (event.which == 27 || event.which == 32 || event.which == 13 || parent.HitOK( event ) || (event.which == 78)  || (event.which == 110) || (event.which == 29) || (event.which == 31) || (event.which == 12) ) { if ( IsContextMenu() ) { return parent.KPH(event); }  parent.base.CloseFullScreen(); return; } ' +
+	' else if ( (event.which == 80)  || (event.which == 112) || (event.which == 30) || (event.which == 28) || (event.which == 11) || (event.which == 8) ) { parent.M_GoPrevSld(); } } ' +
+	'if( parent.HideMenu() ) return; if( (parent.IsFullScrMode() ) && event) { if ( (event.keyCode==27 || event.keyCode == 13 || event.keyCode==32 || event.type=="click" ) || (event.keyCode == 78)  || (event.keyCode == 110) ) { parent.base.CloseFullScreen(); }' +
+	' else if ( (event.keyCode == 80)  || (event.keyCode == 112) ) { parent.M_GoPrevSld(); } } } function Unload() { parent.gIsEndShow=0; } function SetupEndShow() {    if ( !parent.IsFullScrMode() ) { return; } else { parent.PPTNav.location.reload(); }  parent.gIsEndShow=1; if ( parent.g_docTable[0].type != "jpeg" ) { if ( parent.base.msie < 0 ) {parent.createCM(); } document.oncontextmenu=parent._CM; } }</script></head><body scroll=\"no\" onclick=\"DocumentOnClick(event)\" onkeypress=\"_KPH(event)\" bgcolor=\"black\" onload=\"SetupEndShow()\" onunload=\"Unload()\"><center><p><font face=Tahoma color=white size=2><br><b>' + ENDSHOW_MESG + '</b></font></p></center></body></html>')
+	doc.close()
+}
+function SetSldVisited(){ gDocTable[gCurSld-1].mVisited=true }
+function IsSldVisited(){ return gDocTable[gCurSld-1].mVisited }
+function hrefList( sldHref, visible, sldIdx )
+{
+	this.mSldHref= this.mNtsHref = sldHref
+	this.mSldIdx = sldIdx
+	this.mOrigVis= this.mVis = visible
+	this.mVisited= false
+}
+var gDocTable = new Array(
+   new hrefList("slide0001.htm", 1, 1),
+   new hrefList("slide0002.htm", 1, 2),
+   new hrefList("slide0003.htm", 1, 3),
+   new hrefList("slide0004.htm", 1, 4),
+   new hrefList("slide0005.htm", 1, 5),
+   new hrefList("slide0006.htm", 1, 6),
+   new hrefList("slide0007.htm", 1, 7),
+   new hrefList("slide0008.htm", 1, 8),
+   new hrefList("slide0009.htm", 1, 9),
+   new hrefList("slide0010.htm", 1, 10),
+   new hrefList("slide0011.htm", 1, 11),
+   new hrefList("slide0012.htm", 1, 12),
+   new hrefList("slide0013.htm", 1, 13),
+   new hrefList("slide0014.htm", 1, 14),
+   new hrefList("slide0015.htm", 1, 15),
+   new hrefList("slide0016.htm", 1, 16),
+   new hrefList("slide0017.htm", 1, 17),
+   new hrefList("slide0018.htm", 1, 18),
+   new hrefList("slide0019.htm", 1, 19),
+   new hrefList("slide0020.htm", 1, 20),
+   new hrefList("slide0021.htm", 1, 21),
+   new hrefList("slide0022.htm", 1, 22),
+   new hrefList("slide0023.htm", 1, 23),
+   new hrefList("slide0024.htm", 1, 24),
+   new hrefList("slide0025.htm", 1, 25),
+   new hrefList("slide0026.htm", 1, 26),
+   new hrefList("slide0027.htm", 1, 27),
+   new hrefList("slide0028.htm", 1, 28),
+   new hrefList("slide0029.htm", 1, 29),
+   new hrefList("slide0030.htm", 1, 30),
+   new hrefList("slide0031.htm", 1, 31),
+   new hrefList("slide0032.htm", 1, 32)
+);
+
+function ImgBtn( oId,bId,w,action )
+{
+	var t=this
+	t.Perform    = _IBP
+	t.SetActive  = _IBSetA
+ t.SetInactive= _IBSetI
+	t.SetPressed = _IBSetP
+	t.SetDisabled= _IBSetD
+	t.Enabled    = _IBSetE
+	t.ChangeIcon = null
+	t.UserAction = action
+	t.ChgState   = _IBUI
+	t.mObjId   = oId
+	t.mBorderId= bId
+	t.mWidth   = w
+	t.mIsOn    = t.mCurState = 0
+}
+function _IBSetA()
+{
+	if( this.mIsOn ) {
+		obj=this.ChgState( gHiliteClr,gShadowClr,2 )
+		obj.style.posTop=0
+	}
+}
+function _IBSetI()
+{
+	if( this.mIsOn ) {
+		obj=this.ChgState( gFaceClr,gFaceClr,1 )
+		obj.style.posTop=0 
+	}
+}
+function _IBSetP()
+{
+	if( this.mIsOn ) {
+		obj=this.ChgState( gShadowClr,gHiliteClr,2 )
+		obj.style.posLeft+=1; obj.style.posTop+=1
+	}
+}
+function _IBSetD()
+{  
+	obj=this.ChgState( gFaceClr,gFaceClr,0 )
+	obj.style.posTop=0 
+}
+function _IBSetE( state )
+{
+	var t=this
+	GetObj( t.mBorderId ).style.visibility="visible"
+	if( state != t.mIsOn ) {
+		t.mIsOn=state
+		if( state )
+			t.SetInactive()
+		else
+			t.SetDisabled()
+	}
+}
+function _IBP()
+{
+	var t=this
+	if( t.mIsOn ) {
+		if( t.UserAction != null )
+			t.UserAction()
+		if( t.ChangeIcon ) {
+			obj=GetObj(t.mObjId)
+			if( t.ChangeIcon() )
+				obj.style.posLeft=obj.style.posLeft+(t.mCurState-4)*t.mWidth
+			else
+				obj.style.posLeft=obj.style.posLeft+(t.mCurState-0)*t.mWidth
+		}
+		t.SetActive()
+	}  
+}
+function _IBUI( clr1,clr2,nextState )
+{
+	var t=this
+	SetBorder( GetObj( t.mBorderId ),clr1,clr2 )
+	obj=GetObj( t.mObjId )
+	obj.style.posLeft=obj.style.posLeft+(t.mCurState-nextState)*t.mWidth-obj.style.posTop
+	t.mCurState=nextState
+	return obj
+}
+function TxtBtn( oId,oeId,action,chkState )
+{
+	var t=this
+	t.Perform    = _TBP
+	t.SetActive  = _TBSetA
+	t.SetInactive= _TBSetI
+	t.SetPressed = _TBSetP
+	t.SetDisabled= _TBSetD
+	t.SetEnabled = _TBSetE
+	t.GetState   = chkState
+	t.UserAction = action
+	t.ChgState   = _TBUI
+	t.mObjId      = oId
+	t.m_elementsId= oeId
+	t.mIsOn       = 1
+}
+function _TBSetA()
+{
+	var t=this
+	if( t.mIsOn && !t.GetState() )
+		t.ChgState( gHiliteClr,gShadowClr,0,0 )
+}
+function _TBSetI()
+{
+	var t=this
+	if( t.mIsOn && !t.GetState() )
+		t.ChgState( gFaceClr,gFaceClr,0,0 )
+}
+function _TBSetP()
+{
+	if( this.mIsOn )
+		this.ChgState( gShadowClr,gHiliteClr,1,1 )
+}
+function _TBSetD()
+{   
+	this.ChgState( gFaceClr,gFaceClr,0,0 )
+	this.mIsOn = 0
+}
+function _TBSetE()
+{
+	var t=this
+	if( !t.GetState() )
+		t.ChgState( gFaceClr,gFaceClr,0,0 )
+	else
+		t.ChgState( gShadowClr,gHiliteClr,1,1 )
+	t.mIsOn = 1
+}
+function _TBP()
+{
+	var t=this
+	if( t.mIsOn ) { 
+		if( t.UserAction != null )
+			t.UserAction()
+		if( t.GetState() )
+			t.SetPressed()
+		else
+			t.SetActive()
+	}  
+}
+function _TBUI( clr1,clr2,lOffset,tOffset )
+{
+	SetBorder( GetObj( this.mObjId ),clr1,clr2 )
+	Offset( GetObj( this.m_elementsId ),lOffset,tOffset )
+}
+function GetObj( objId ){ return document.all.item( objId ) }
+function Offset( obj, top, left ){ obj.style.top=top; obj.style.left=left }
+function SetBorder( obj, upperLeft, lowerRight )
+{
+	s=obj.style;
+	s.borderStyle      = "solid"
+	s.borderWidth      = 1 
+	s.borderLeftColor  = s.borderTopColor = upperLeft
+	s.borderBottomColor= s.borderRightColor = lowerRight
+}
+function GetBtnObj(){ return gBtnArr[window.event.srcElement.id] }
+function BtnOnOver(){ b=GetBtnObj(); if( b != null ) b.SetActive() }
+function BtnOnDown(){ b=GetBtnObj(); if( b != null ) b.SetPressed() }
+function BtnOnOut(){ b=GetBtnObj(); if( b != null ) b.SetInactive() }
+function BtnOnUp()
+{
+	b=GetBtnObj()
+	if( b != null )
+		b.Perform()
+	else
+		Upd()
+}
+function GetNtsState(){ return parent.gNtsOpen }
+function GetOtlState(){ return parent.gOtlOpen }
+function GetOtlTxtState(){ return parent.gOtlTxtExp }
+function NtsBtnSetFlag( fVal )
+{
+	s=document.all.item( this.m_flagId ).style
+	s.display="none"
+	if( fVal )
+		s.display=""
+	else
+		s.display="none"
+}
+
+var gHiliteClr="THREEDHIGHLIGHT",gShadowClr="THREEDSHADOW",gFaceClr="THREEDFACE"
+var gBtnArr = new Array()
+gBtnArr["nb_otl"] = new TxtBtn( "nb_otl","nb_otlElem",parent.ToggleOtlPane,GetOtlState )
+gBtnArr["nb_nts"] = new TxtBtn( "nb_nts","nb_ntsElem",parent.ToggleNtsPane,GetNtsState )
+gBtnArr["nb_prev"]= new ImgBtn( "nb_prev","nb_prevBorder",30,parent.GoToPrevSld )
+gBtnArr["nb_next"]= new ImgBtn( "nb_next","nb_nextBorder",30,parent.GoToNextSld )
+gBtnArr["nb_sldshw"]= new ImgBtn( "nb_sldshw","nb_sldshwBorder",18,parent.FullScreen )
+gBtnArr["nb_voice"]  = new ImgBtn( "nb_voice","nb_voiceBorder",18,parent.ToggleVNarration )
+gBtnArr["nb_otlTxt"]= new ImgBtn( "nb_otlTxt","nb_otlTxtBorder",23,parent.ToggleOtlText )
+gBtnArr["nb_nts"].m_flagId= "notes_flag"
+gBtnArr["nb_nts"].SetFlag = NtsBtnSetFlag
+gBtnArr["nb_otlTxt"].ChangeIcon= GetOtlTxtState
+var sNext="Next",sPrev="Previous",sEnd="End Show",sFont="Arial", alwaysOn = false
+function ShowMenu()
+{
+	BuildMenu();
+	var doc=PPTSld.document.body,x=PPTSld.event.clientX+doc.scrollLeft,y=PPTSld.event.clientY+doc.scrollTop
+
+	m = PPTSld.document.all.item("ctxtmenu")
+	m.style.pixelLeft=x
+	if( (x+m.scrollWidth > doc.clientWidth)&&(x-m.scrollWidth > 0) )
+		m.style.pixelLeft=x-m.scrollWidth
+
+	m.style.pixelTop=y
+	if( (y+m.scrollHeight > doc.clientHeight)&&(y-m.scrollHeight > 0) )
+		m.style.pixelTop=y-m.scrollHeight
+
+	m.style.display=""
+}
+function _CM()
+{
+	if( !parent.IsFullScrMode() && !alwaysOn) return;
+	
+	if(!PPTSld.event.ctrlKey) {
+		ShowMenu()
+		return false
+	} else
+		HideMenu()
+}
+
+function processNavKPH(event) {
+   if ( PPTSld &&  (event.keyCode != 13 || !event.srcElement.href || event.srcElement.href == "" ) )
+	return PPTSld._KPH(event);
+}
+function processNavClick() {
+	HideMenu();
+	return true;
+}
+function BuildMenu()
+{
+	if( PPTSld.document.all.item("ctxtmenu") ) return
+
+	var mObj=CreateItem( PPTSld.document.body )
+mObj.id="ctxtmenu"
+	var s=mObj.style
+	s.position="absolute"
+ s.cursor="default"
+	s.width="100px"
+	SetCMBorder(mObj,"menu","black")
+
+	var iObj=CreateItem( mObj )
+	SetCMBorder( iObj, "threedhighlight","threedshadow" )
+	iObj.style.padding=2
+	if ( self.IsFullScrMode() ) {
+		CreateMenuItem( iObj,sNext,M_GoNextSld,M_True )
+		CreateMenuItem( iObj,sPrev,M_GoPrevSld,M_HasPrevSld )
+	}
+	else {
+		CreateMenuItem( iObj,sNext, base.TP_GoToNextSld, base.HasNextSld )
+		CreateMenuItem( iObj,sPrev,base.GoToPrevSld, base.HasPrevSld )
+	}
+	var sObj=CreateItem( iObj )
+	SetCMBorder(sObj,"menu","menu")
+	var s=sObj.style
+	s.borderTopColor="threedshadow"
+	s.borderBottomColor="threedhighlight"
+	s.height=1
+	s.fontSize="0px"
+	if ( self.IsFullScrMode() ) 
+		CreateMenuItem( iObj,sEnd,M_End,M_True )
+	else
+		CreateMenuItem( iObj,sEnd,M_End,M_False )
+}
+function Highlight() { ChangeClr("activecaption","threedhighlight") }
+function Deselect() { ChangeClr("threedface","menutext") }
+function Perform()
+{
+	e=PPTSld.event.srcElement
+	if( e.type=="menuitem" && e.IsActive() )
+		e.Action()
+	else
+		PPTSld.event.cancelBubble=true
+}
+function ChangeClr( bg,clr )
+{
+	e=PPTSld.event.srcElement
+	if( e.type=="menuitem" && e.IsActive() ) {
+		e.style.backgroundColor=bg
+		e.style.color=clr
+	}
+}
+
+function M_HasPrevSld() { return( base.HasPrevSld() ) }
+function M_GoNextSld() { 
+	base.SetFSMode(1);
+	if( gIsEndShow )
+		 M_End();
+	else {
+		if ( base.HasNextSld() )
+		 base.GoToNextSld();
+		else if (  base.EndSlideShow ) {
+		 StartEndShow();
+		 gIsEndShow = 1;
+		 
+		 PPTNav.location.reload();
+		}
+		else
+			base.CloseFullScreen();
+	}
+}
+function M_GoPrevSld() {
+	base.SetFSMode(1);
+	g_hideNav = 0;
+	if( gIsEndShow ) { 
+		gIsEndShow = 0;
+		if ( base.msie > 0 && IsMac() ) 
+			ChangeFrame( SLIDE_FRAME, GetHrefObj( g_currentSlide ).m_slideHref );
+		else	
+		PPTSld.history.back();
+		
+		 PPTNav.location.reload();
+		if( PPTSld.event )
+			 PPTSld.event.cancelBubble=true;
+	}
+	else
+	 	base.GoToPrevSld();
+}
+function M_True() { return true }
+function M_False() { return false }
+
+function M_End() {
+	base.CloseFullScreen();
+	/*PPTSld.event.cancelBubble=true;
+	window.close( self )*/
+}
+
+function CreateMenuItem( node,text,action,eval )
+{
+	var e=CreateItem( node )
+	e.type="menuitem"
+	e.Action=action
+	e.IsActive=eval
+	e.innerHTML=text
+
+	if( !e.IsActive() )
+		e.style.color="threedshadow"
+	e.onclick=Perform
+	e.onmouseover=Highlight
+	e.onmouseout=Deselect
+	s=e.style;
+	s.fontFamily=sFont
+	s.fontSize="8pt"
+	s.paddingLeft=2
+}
+function CreateItem( node )
+{
+	var elem=PPTSld.document.createElement("DIV")
+	node.insertBefore( elem )
+	return elem
+}
+function SetCMBorder( o,ltClr,rbClr )
+{
+	var s=o.style
+	s.backgroundColor="menu"
+	s.borderStyle="solid"
+	s.borderWidth=1
+	s.borderColor=ltClr+" "+rbClr+" "+rbClr+" "+ltClr
+}
+
+/* netscape context menu */
+g_ctxmenu = 0;
+function setRect( obj, X, Y, W, H ) {
+	obj.top = Y;
+	obj.left = X;
+	obj.clip.top = 0;
+	obj.clip.left = 0;
+	obj.clip.bottom = H;
+	obj.clip.right = W;
+}	
+
+function KPH(event) {
+	if ( ! base.IsFullScrMode() && !alwaysOn )
+		return true;
+		
+	if ( (!IsMac() &&event.which == 3) || ( IsMac() && (event.modifiers & Event.CONTROL_MASK) && event.which == 1 )   ) {
+		PPTSld.g_ctxmenu = 1;
+		PPTSld.stripUobj.visibility = "show";
+		PPTSld.stripDobj.visibility = "show";
+		PPTSld.shadeUobj.visibility = "show";
+		PPTSld.shadeDobj.visibility = "show";
+		PPTSld.panelobj.visibility = "show";
+		PPTSld.Fobj.visibility = "show";
+		PPTSld.Bobj.visibility = "show";
+		PPTSld.Eobj.visibility = "show";
+
+		setRect(PPTSld.shadeUobj, event.pageX-2, event.pageY-2, 82, 67 );		
+		setRect(PPTSld.shadeDobj, event.pageX, event.pageY, 82, 67 );		
+		setRect(PPTSld.panelobj, event.pageX, event.pageY, 80, 65 );		
+		setRect(PPTSld.Fobj, event.pageX, event.pageY, 80, 20 );
+		setRect(PPTSld.Bobj, event.pageX, event.pageY+20, 80, 20 );
+		setRect(PPTSld.stripUobj, event.pageX, event.pageY+41, 80, 1 );		
+		setRect(PPTSld.stripDobj, event.pageX, event.pageY+43, 80, 1 );		
+		setRect(PPTSld.Eobj, event.pageX, event.pageY+45, 80, 20 );
+		return false;
+	}
+	if ( HitOK( event ) ) {
+	PPTSld.g_ctxmenu = 0;
+		PPTSld.stripUobj.visibility = "hide";
+		PPTSld.stripDobj.visibility = "hide";
+		PPTSld.shadeUobj.visibility = "hide";
+		PPTSld.shadeDobj.visibility = "hide";
+		PPTSld.panelobj.visibility = "hide";
+		PPTSld.Fobj.visibility = "hide";
+		PPTSld.Bobj.visibility = "hide";
+		PPTSld.Eobj.visibility = "hide";
+	}
+	return true;
+}
+
+function overMe() {
+	this.bgColor = "blue";
+}
+
+function outMe() {
+	this.bgColor = "#AAAAAA"; 
+}
+
+function makeElement( whichEl, whichContainer ) {
+	if ( arguments.length == 1 ) {
+		whichContainer = PPTSld;
+	}
+	tmp = new Layer(100,whichContainer);
+	eval( whichEl + " = tmp" );
+	return eval(whichEl);
+}
+
+function initMe( obj, clr, text ) {
+	obj.bgColor = clr;
+//	obj.document.write("<a href='javascript:return false'>" + text + "</a>");
+	obj.document.write( "<font size=2 face=Arial " );
+	if ( !M_HasPrevSld() && (obj == PPTSld.Bobj )  ) {
+		obj.document.write( " color='#808080' " );
+	}
+	else {
+		obj.onmouseover = overMe;
+		obj.onmouseout = outMe;
+	}	
+	obj.document.write( " > &nbsp " + text +"</font> <layer top=0 left=0 width=100 height=40 ></layer>");
+	obj.document.close();
+	obj.captureEvents(Event.CLICK);
+	obj.color = "black";		
+}
+
+function createCM() {
+  if ( base.IsFullScrMode() ) {
+  	var clr = "#AAAAAA";
+	PPTSld.shadeUobj = makeElement("SHADEU");
+	PPTSld.shadeDobj = makeElement("SHADED");
+	PPTSld.panelobj = makeElement("PANEL");
+	PPTSld.stripUobj = makeElement("STRIPU");
+	PPTSld.stripDobj = makeElement("STRIPD");
+	PPTSld.shadeUobj.bgColor = "#BBBBBB";
+	PPTSld.shadeDobj.bgColor = "#888888";
+	PPTSld.stripUobj.bgColor = "#777777";
+	PPTSld.stripDobj.bgColor = "#CCCCCC";
+	PPTSld.panelobj.bgColor = clr;
+	PPTSld.Fobj = makeElement("Next");
+	PPTSld.Bobj = makeElement("Previous");
+	PPTSld.Eobj = makeElement("EndShow");
+	initMe( PPTSld.Fobj, clr, "Next" );
+	PPTSld.Fobj.onclick = M_GoNextSld;
+
+	initMe( PPTSld.Bobj, clr, "Previous" );
+	PPTSld.Bobj.onclick = M_GoPrevSld;
+
+	initMe( PPTSld.Eobj, clr, "End Show");
+	PPTSld.Eobj.onclick = base.CloseFullScreen;
+  }
+}
+
+function IsContextMenu() {
+	return (g_ctxmenu == 1)
+}
+var g_notesTable = new Array()
+var g_hiddenSlide = new Array()
+makeSlide( 0,1,1);
+makeSlide( 1,1,1);
+makeSlide( 2,1,1);
+makeSlide( 3,1,1);
+makeSlide( 4,1,1);
+makeSlide( 5,1,1);
+makeSlide( 6,1,1);
+makeSlide( 7,1,1);
+makeSlide( 8,1,1);
+makeSlide( 9,1,1);
+makeSlide( 10,1,1);
+makeSlide( 11,1,1);
+makeSlide( 12,1,1);
+makeSlide( 13,1,1);
+makeSlide( 14,1,1);
+makeSlide( 15,1,1);
+makeSlide( 16,1,1);
+makeSlide( 17,1,1);
+makeSlide( 18,1,1);
+makeSlide( 19,1,1);
+makeSlide( 20,1,1);
+makeSlide( 21,1,1);
+makeSlide( 22,1,1);
+makeSlide( 23,1,1);
+makeSlide( 24,1,1);
+makeSlide( 25,1,1);
+makeSlide( 26,1,1);
+makeSlide( 27,1,1);
+makeSlide( 28,1,1);
+makeSlide( 29,1,1);
+makeSlide( 30,1,1);
+makeSlide( 31,1,1);
+
+var END_SHOW_HREF         = "endshow.htm",
+    OUTLINE_EXPAND_HREF   = "outline_expanded.htm",
+    OUTLINE_COLLAPSE_HREF = "outline_collapsed.htm",
+    OUTLINE_NAVBAR_HREF  = "outline_navigation_bar.htm",
+    NAVBAR_HREF           = "navigation_bar.htm",
+    BLANK_NOTES_HREF	  = "blank_notes.htm",
+    NUM_VISIBLE_SLIDES    = 32,
+    SIMPLE_FRAMESET       = 0,
+    SLIDE_FRAME	        = "PPTSld",
+    NOTES_FRAME           = "PPTNts",
+    OUTLINE_FRAME         = "PPTOtl",
+    OUTLINE_NAVBAR_FRAME  = "PPTOtlNav",
+    NAVBAR_FRAME          = "PPTNav",
+	MAIN_FRAME			  = "MainFrame",
+	FS_NAVBAR_HREF		  = "fs_navigation_bar.htm",
+	isIEFiles 			= 2,
+	isNAVFiles 			= 8,
+	isFLATFiles 			= 16,
+	includeNotes			= 1,
+	PPTPRESENTATION     = 1;
+var  INITSLIDENUM   = 1;
+
+var EndSlideShow = 0;
+var g_outline_href = OUTLINE_COLLAPSE_HREF;	
+var g_fullscrMode = 0;	
+var FSWin = null;
+var gtmpstr = document.location.href;
+var g_baseURL = gtmpstr.substr(0, gtmpstr.lastIndexOf("/") ) + "/" + "WebQTLDemo_files";
+var g_showoutline = 1;
+var g_shownotes = includeNotes;
+var g_currentSlide = INITSLIDENUM, g_prevSlide = INITSLIDENUM;
+var saveFSSlideNum = saveTPSlideNum = g_currentSlide;
+var saveFSprevSlide = saveTPprevSlide = g_prevSlide;
+var g_slideType="ie";
+var appVer = navigator.appVersion;
+var msie = appVer.indexOf( "MSIE " ) + appVer.indexOf( "Internet Explorer " );
+var isnav = ( navigator.appName.indexOf( "Netscape" ) >= 0 );
+var msieWin31 = (appVer.indexOf( "Windows 3.1" ) > 0);
+var ver = 0;
+var g_done = 0;
+var g_prevotlobjidx = 0;
+var g_ShowFSDefault = 0;
+var g_lastVisibleSld = 1;
+var g_allHidden = false;
+function IsIE() {
+	return (msie >= 0 );
+}
+
+function IsNav() {
+	return (isnav);
+}
+var msiePos = appVer.indexOf( "MSIE " );
+var inexPos = appVer.indexOf( "Internet Explorer " );
+if ( msiePos >= 0 )
+  ver = parseFloat( appVer.substring( msiePos+5, appVer.indexOf ( ";", msiePos ) ) );
+else if( inexPos >= 0 )
+  ver=parseFloat( appVer.substring( inexPos+18, appVer.indexOf(";",inexPos) ) )
+else
+  ver = parseInt( appVer );
+
+//var g_supportsPPTHTML = 0; //!msieWin31 && ( ( msie >= 0 && ver >= 3.02 ) || ( msie < 0 && ver >= 3 ) );
+
+function GetCurrentSlideNum()
+{   
+  obj = GetHrefObj( g_currentSlide );
+  if ( GetHrefObj( g_currentSlide ).m_origVisibility == 1 )
+    return obj.m_slideIdx;
+  else   
+    return g_currentSlide;
+}
+
+function GetNumSlides()
+{
+  if ( GetHrefObj( g_currentSlide ).m_origVisibility == 1 )
+    return NUM_VISIBLE_SLIDES;
+  else
+    return g_docTable.length;
+}
+
+function GetHrefObj( slideIdx )
+{ return g_docTable[slideIdx - 1];
+}
+
+function GetSlideNum( slideHref )
+{
+  for (ii=0; ii<g_docTable.length; ii++) {
+    if ( g_docTable[ii].m_slideHref == slideHref )
+      return ii+1;
+  }
+  return 1;
+}
+
+function GoToNextSld()
+{   
+  targetIdx = g_currentSlide + 1;
+  if ( GetHrefObj( targetIdx-1 ).m_origVisibility == 0 ) {
+    if ( targetIdx<=g_docTable.length ) {
+      obj = GetHrefObj( targetIdx );
+      obj.m_visibility = 1;
+      GoToSld( obj.m_slideHref );
+    }
+  }
+  else {
+    obj = GetHrefObj( targetIdx );
+    while ( obj && ( obj.m_origVisibility == 0 ) && ( targetIdx<=g_docTable.length ) )
+      obj = GetHrefObj( targetIdx++ );
+    if( obj && obj.m_origVisibility )
+      GoToSld( obj.m_slideHref );
+  }
+}
+
+function GoToPrevSld()
+{
+  targetIdx = g_currentSlide - 1;
+  if ( targetIdx > 0 ) {
+    obj = GetHrefObj( targetIdx );
+    while ( ( obj.m_visibility == 0 ) && ( targetIdx>0 ) )
+      obj = GetHrefObj( targetIdx-- );
+    GoToSld( obj.m_slideHref );
+  }
+}
+
+function GoToLast()
+{
+  targetIdx = g_docTable.length;
+  if ( targetIdx != g_currentSlide )
+    GoToSld( GetHrefObj( targetIdx ).m_slideHref );
+}
+
+function GoToFirst()
+{ GoToSld( GetHrefObj(1).m_slideHref );
+}
+
+function highlite() {
+	if ( IsFullScrMode() )
+		return;
+	index = GetCurrentSlideNum();
+	if ( !frames[MAIN_FRAME].frames[OUTLINE_FRAME] )
+		return;
+	if ( msie < 0 ) {
+		if ( g_prevotlobjidx != 0 ) {
+			eval( "otlobj = frames[MAIN_FRAME].frames[OUTLINE_FRAME].document.LAYERID" + g_prevotlobjidx );
+			otlobj.hidden = true;
+		}
+		else
+			index = GetCurrentSlideNum();
+		eval( "otlobj = frames[MAIN_FRAME].frames[OUTLINE_FRAME].document.LAYERID" + index );
+		otlobj.hidden = false;
+	
+		g_prevotlobjidx = index;
+		
+		return;
+	}
+	if ( !g_showoutline )
+		return;
+		
+		backclr = frames[MAIN_FRAME].frames[OUTLINE_FRAME].document.body.bgColor;
+		textclr = frames[MAIN_FRAME].frames[OUTLINE_FRAME].document.body.text;
+	if ( g_prevotlobjidx != 0 ) {
+		eval( "otlobj = frames[MAIN_FRAME].frames[OUTLINE_FRAME].document.all.p" + g_prevotlobjidx );
+		otlobj.style.backgroundColor = backclr;
+		otlobj.style.color = textclr;
+		otlobj.all.AREF.style.color = textclr;
+	}
+	else
+		index = GetCurrentSlideNum();
+	eval( "otlobj = frames[MAIN_FRAME].frames[OUTLINE_FRAME].document.all.p" + index );
+	otlobj.style.backgroundColor = textclr;
+	otlobj.style.color = backclr;
+	otlobj.all.AREF.style.color = backclr;
+	g_prevotlobjidx = index;
+}
+
+function ChangeFrame( frame, href )
+{
+if ( IsFramesMode() ) {
+  if ( NAVBAR_FRAME == frame || OUTLINE_NAVBAR_FRAME ==  frame ) {
+	    frames[frame].location.replace(href);
+  }
+  else if( ! ( ( OUTLINE_FRAME == frame && !g_showoutline)  || (NOTES_FRAME == frame && !g_shownotes ) ) ){
+	    frames[MAIN_FRAME].frames[frame].location.href = href;
+  }
+ }
+ else {
+ 	if ( frame == NAVBAR_FRAME || frame == SLIDE_FRAME ) {
+ 	  if( frame == NAVBAR_FRAME ) {
+ 	  	 href = FS_NAVBAR_HREF;
+ 	  	
+ 	  }	    
+ 	  if( frame == NAVBAR_FRAME ) 
+	      window.frames[frame].location.replace(href);
+	 else
+	      window.frames[frame].location.href = href;
+ 	}
+ }
+  
+}
+
+function shutEventPropagation() {
+	if ( IsNav() )
+		return;
+		
+	var slideFrame;
+	if ( IsFramesMode() )
+		slideFrame = frames[MAIN_FRAME].frames[SLIDE_FRAME];
+	else
+		slideFrame = window.frames[SLIDE_FRAME];
+	if ( slideFrame.event ) 
+		slideFrame.event.cancelBubble=true;
+}
+				
+function GoToSld( slideHref )
+{
+  shutEventPropagation();
+  if ( slideHref != GetHrefObj( g_currentSlide ).m_slideHref || g_slideType != GetHrefObj( g_currentSlide ).type) {
+    g_prevSlide = g_currentSlide;
+    g_currentSlide = GetSlideNum( slideHref );
+	g_slideType = GetHrefObj( g_currentSlide ).type;
+    obj = GetHrefObj( g_currentSlide );
+    obj.m_visibility = 1;
+    ChangeFrame( SLIDE_FRAME, slideHref );
+    if( !SIMPLE_FRAMESET )
+      ChangeFrame( NOTES_FRAME, obj.m_notesHref );
+    ChangeFrame( NAVBAR_FRAME, NAVBAR_HREF );
+	    
+  }
+}
+
+function PrevSldViewed()
+{ GoToSld( GetHrefObj( g_prevSlide ).m_slideHref );
+}
+
+function NoHref() {}
+
+function ExpandOutline( )
+{ 
+ g_outline_href = OUTLINE_EXPAND_HREF;
+ ChangeFrame( OUTLINE_FRAME, OUTLINE_EXPAND_HREF );
+ frames[OUTLINE_NAVBAR_FRAME].location.replace( OUTLINE_NAVBAR_HREF);
+}
+
+function CollapseOutline()
+{ 
+ g_outline_href = OUTLINE_COLLAPSE_HREF;
+ ChangeFrame( OUTLINE_FRAME, OUTLINE_COLLAPSE_HREF );
+ frames[OUTLINE_NAVBAR_FRAME].location.replace( OUTLINE_NAVBAR_HREF);
+ }
+
+function SlideUpdated( id )
+{
+  if ( id != GetHrefObj( g_currentSlide ).m_slideHref )  {
+    g_prevSlide = g_currentSlide;
+    g_currentSlide = GetSlideNum( id );
+    obj = GetHrefObj( g_currentSlide );
+    if( !SIMPLE_FRAMESET )
+      ChangeFrame( NOTES_FRAME, obj.m_notesHref );
+    ChangeFrame( NAVBAR_FRAME, NAVBAR_HREF );
+  }
+}
+
+function hrefList( slideHref, notesHref, visible, slideIdx, type )
+{
+  this.m_slideHref  = slideHref;
+  this.m_notesHref  = notesHref;
+  this.m_navbarHref = NAVBAR_HREF;
+  this.m_origVisibility = visible;
+  this.m_visibility = visible;
+  this.m_slideIdx = slideIdx;
+  this.type = type;
+}
+
+function IsFullScrMode() {
+	return g_fullscrMode;
+}
+
+
+function IsFramesMode() {
+	return (1 - g_fullscrMode);
+}
+
+function SldUpdated( id )
+{
+  if ( ( id != GetHrefObj( g_currentSlide ).m_slideHref )  || ( g_currentSlide == g_lastVisibleSld ) ){
+    g_prevSlide = g_currentSlide;
+    g_currentSlide = GetSlideNum( id );
+    obj = GetHrefObj( g_currentSlide );
+    if( !SIMPLE_FRAMESET )
+      ChangeFrame( NOTES_FRAME, obj.m_notesHref );
+    ChangeFrame( NAVBAR_FRAME, NAVBAR_HREF );
+  }
+}
+
+function ToggleOutline() {
+	g_showoutline = 1 - g_showoutline;
+	writeMyFrame();
+}
+
+function ShowHideNotes() {
+	g_shownotes = 1 - g_shownotes;
+	writeMyFrame();
+}
+
+function writeMyFrame() {
+		SetFSMode(0);
+		obj = frames[MAIN_FRAME];
+		
+		var curslide = g_baseURL + "/" +  GetHrefObj( g_currentSlide ).m_slideHref;
+		var curnotes = g_baseURL + "/" +  GetHrefObj( g_currentSlide ).m_notesHref;
+		var otlhref = g_baseURL + "/" +  g_outline_href;
+		if ( msie < 0 ) {			
+		if ( ! g_showoutline && g_shownotes ) {
+			obj.document.write( '<HTML><HEAD><SCRIPT language=JavaScript src=' + g_baseURL + '/script.js></SCRIPT><SCRIPT> base = parent; <\/SCRIPT><\/HEAD> \
+				<frameset rows=\"*,20%\" id=\"frameset2\" > \
+				<frame src=\"' + curslide + '\" name=PPTSld marginheight=0 marginwidth=0> \
+				<frame src=\"' + curnotes + '\" name=PPTNts marginheight=0 marginwidth=0> \
+				</frameset> </html>' );
+		}
+		else if( g_showoutline && g_shownotes  ){
+			obj.document.write( '<HTML><HEAD><SCRIPT language=JavaScript src=' + g_baseURL + '/script.js></SCRIPT><SCRIPT> base = parent; <\/SCRIPT><\/HEAD> \
+				<frameset cols=\"20%,*\" id=\"frameset1\"> \
+				<frame src=\"' + otlhref + '\" name=PPTOtl> \
+				<frameset rows=\"*,20%\" id=\"frameset2\" > \
+				<frame src=\"' + curslide + '\" name=PPTSld marginheight=0 marginwidth=0> \
+				<frame src=\"' + curnotes + '\" name=PPTNts marginheight=0 marginwidth=0> \
+				</frameset> </frameset></html>' );
+		}		
+		else if ( !g_shownotes && !g_showoutline ) {
+			obj.document.write( '<HTML><HEAD><SCRIPT language=JavaScript src=' + g_baseURL + '/script.js></SCRIPT><SCRIPT> base = parent; <\/SCRIPT><\/HEAD> \
+				<frameset rows="*,0" frameborder=0 > \
+				<frame src=\"' + curslide + '\" name=PPTSld marginheight=0 marginwidth=0> \
+				</frameset> </html>' );
+		}
+		else if( !g_shownotes  && g_showoutline ) {
+			obj.document.write( '<HTML><HEAD><SCRIPT language=JavaScript src=' + g_baseURL + '/script.js></SCRIPT><SCRIPT> base = parent; <\/SCRIPT><\/HEAD> \
+				<frameset cols=\"20%,*\" id=\"frameset1\"> \
+				<frame src=\"' + otlhref + '\" name=PPTOtl> \
+				<frame src=\"' + curslide + '\" name=PPTSld marginheight=0 marginwidth=0> \
+				</frameset></html>' );
+		}
+		obj.document.close();
+		}
+		else {
+			if ( g_showoutline ) {
+				obj.PPTHorizAdjust.cols = "20%,*";
+				obj.PPTOtl.location.reload();
+			}
+			else {
+				obj.PPTHorizAdjust.cols = "0,*";
+			}
+			if ( g_shownotes ) {
+				obj.PPTVertAdjust.rows = "*,20%";
+				obj.PPTNts.location.href = curnotes;
+			}
+			else {
+				obj.PPTVertAdjust.rows = "*,0";
+			}
+		}
+		ChangeFrame( OUTLINE_NAVBAR_FRAME, OUTLINE_NAVBAR_HREF );
+}
+
+function FullScreen() {
+	g_done = 0;
+
+	
+	SetFSMode(1);
+	if ( msie >= 0 )
+		FSWin = window.open( g_baseURL + "/" + "fullscreen.htm", null, "fullscreen=yes");
+	else {
+		var height = screen.availHeight;
+		if ( window.navigator.platform.indexOf( "Mac" ) >= 0 ) {
+			height -= 30;
+		}
+		FSWin = window.open( g_baseURL + "/" + "fullscreen.htm", "null", "height="+ height + ",width=" + screen.availWidth + ",screenX=0,screenY=0");
+	}
+}
+
+function SetFSMode( i ) {
+
+}
+
+function Slide( i ) {
+	SetFSMode(0);
+	GoToSld(GetHrefObj(i).m_slideHref);
+}
+
+function TP_GoToNextSld() {
+	SetFSMode(0);
+	GoToNextSld();
+}
+
+function TP_GoToPrevSld() {
+	SetFSMode(0);
+	GoToPrevSld();
+}
+
+function CloseFullScreen() {
+	g_done = 0;	
+	
+	if ( IsNav() ){
+		if ( self.opener )
+			opener.FSWin = null;
+	}
+	window.close();
+}
+
+function slidenum(i) {
+	var slidename = "slide";
+	if ( i < 10 )
+		return ( slidename + "000" + i);
+	else if ( i < 100 )
+		return ( slidename + "00" + i );
+	else if ( i < 1000 ) 
+		return (slidename + "0" + i );
+	else
+		return (slidename + i );
+}
+function UpdateLastVisibleSlide( index ) {
+	if ( g_lastVisibleSld < index ) 
+		g_lastVisibleSld = index;
+}
+
+function jpegArray( numSlides ) {
+count_hidden = 0;
+	g_docTable = new Array();
+  for( i=0; i<numSlides; i++ ) {
+    j = 2 * numSlides + i + 1;
+    var str = slidenum( j ) +".htm";
+	if( g_notesTable[i] == 1 )
+		g_docTable[i] = new hrefList( str, slidenum(i+1 ) + "_notes_pane.htm", g_hiddenSlide[i], i+1-count_hidden, "jpeg" );
+	else
+		g_docTable[i] = new hrefList( str, BLANK_NOTES_HREF, g_hiddenSlide[i], i+1-count_hidden, "jpeg" );
+    if ( !g_hiddenSlide[i] ) count_hidden++;
+    else UpdateLastVisibleSlide( i+1 );
+  }
+}
+
+function ieArray( numSlides ) {
+count_hidden = 0;
+	g_docTable = new Array();
+  for( i=0; i<numSlides; i++ ) {
+    var str = slidenum(i+1) +".htm";
+	if( g_notesTable[i] == 1 )
+		g_docTable[i] = new hrefList( str, slidenum( i+1 ) + "_notes_pane.htm", g_hiddenSlide[i], i+1-count_hidden, "ie" );
+	else
+		g_docTable[i] = new hrefList( str, BLANK_NOTES_HREF, g_hiddenSlide[i], i+1-count_hidden, "ie" );
+    if ( !g_hiddenSlide[i] ) count_hidden++;
+    else UpdateLastVisibleSlide( i+1 );
+  }
+}
+
+function navArray( numSlides ) {
+count_hidden = 0;
+	g_docTable = new Array();
+  for( i=0; i<numSlides; i++ ) {
+    j = numSlides + i + 1;
+    var str = slidenum( j ) +".htm";
+	if( g_notesTable[i] == 1 )
+		g_docTable[i] = new hrefList( str, slidenum(i+1 ) + "_notes_pane.htm", g_hiddenSlide[i], i+1-count_hidden, "nav" );
+	else
+		g_docTable[i] = new hrefList( str, BLANK_NOTES_HREF, g_hiddenSlide[i], i+1-count_hidden, "nav" );
+    if ( !g_hiddenSlide[i] ) count_hidden++;
+    else UpdateLastVisibleSlide( i+1 );
+  }
+}
+
+function LoadHTMLVersion() {
+  var os = window.navigator.platform.indexOf("Mac");
+  if ( (msie || isnav ) && ( (os < 0 && ver >= 4 ) || ( os >= 0 && ver >= 5 ) || (os >=0 && msie < 0 && ver >= 4 ) )  ){
+	if ( msie >= 0 )  {
+		if ( isIEFiles > 0 )
+			ieArray( 32 );
+		else if ( isFLATFiles > 0 ){
+			/*if ( IsFramesMode() )
+				StatusPlay("This presentation is optimized for use with older versions of your browser. Since you are using a more recent version of Microsoft Internet Explorer or Netscape Navigator, consider optimizing this presentation to take advantage of your current version's advanced capabilities."); */
+			jpegArray( 32 );
+		}
+		else
+			window.location.replace(  "WebQTLDemo_files/error.htm" );
+	}
+	else {
+		if ( isNAVFiles > 0 && ver < 5) 
+			navArray( 32 );
+		else if ( isFLATFiles > 0 ) {
+			/* if ( IsFramesMode() )
+				StatusPlay("This presentation is optimized for use with older versions of your browser. Since you are using a more recent version of Microsoft Internet Explorer or Netscape Navigator, consider optimizing this presentation to take advantage of your current version's advanced capabilities."); */
+			jpegArray( 32 );
+		}
+		else
+			window.location.replace(  "WebQTLDemo_files/error.htm" );
+	}
+}
+else {
+	/*
+	if ( IsFramesMode() && !isWebTV() )
+		StatusPlay("This presentation contains content that your browser may not be able to show properly. This presentation was optimized for more recent versions of Microsoft Internet Explorer or Netscape Navigator.");
+	*/
+	if ( isFLATFiles <= 0 ) {
+	/*	if ( IsFramesMode() )
+			window.alert("This presentation contains content that your browser may not be able to display properly. This presentation is optimized for more recent versions of Microsoft Internet Explorer or Netscape Navigator." );
+	*/
+		window.location.replace(  "WebQTLDemo_files/error.htm" );
+	}		
+	/*
+	else if ( IsFramesMode()  && !isWebTV() )
+		StatusPlay( "This presentation contains content that your browser may not be able to show properly. This presentation was optimized for more recent versions of Microsoft Internet Explorer or Netscape Navigator." ); 
+	*/	
+	jpegArray ( 32 );
+  }
+  
+}
+
+function isWebTV() {
+	if ( window.navigator.appName.indexOf( 'WebTV' ) >= 0 )
+		return true;
+	return false;
+}
+		
+var count;
+var statusText;
+var statusfirst = 0;
+ function display50( text ) 
+{
+	len = text.length;
+	if ( len < 50 && count < 2) {
+		window.status = text;
+		window.setTimeout( "repeat()", 300 );
+	}	
+	else {
+		var period = 200;
+		window.status = text;
+		newtext = text.substring( 1, len );
+		if ( statusfirst ) {
+			statusfirst = 0;
+			period = 2000;
+		}	
+		window.setTimeout( "display50( newtext )", period );
+	}
+}
+function repeat(  ) {
+	count++;		
+	statusfirst = 1;
+	display50( statusText );
+}
+
+function StatusPlay( text ) {
+	count = 0;
+	statusText = text;
+	repeat( );		
+ }
+function makeSlide( i, notes, visible ) {
+	g_notesTable[i] = notes;
+	g_hiddenSlide[i] = visible;
+}	
+
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0001.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0001.htm
new file mode 100755
index 00000000..4c783452
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0001.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Jun-19-03: WebQTL Demonstration One please link to  www.webqtl.org/search.html">
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0001.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.gif" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:6.89%;left:3.31%;width:96.42%;height:19.61%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='mso-line-spacing:" 0 &#1;";mso-margin-left-alt:232;
+mso-text-indent-alt:0;position:absolute;top:0%;left:1.09%;width:97.39%;
+height:100.0%'><span style='position:absolute;top:0%;left:0%;width:100.0%'><span
+style='font-size:68%'><i>WebQTL Demonstration One<br>
+</i></span></span><span
+style='position:absolute;top:33.33%;left:4.23%;width:95.76%'><span
+style='font-size:68%'><i>please link to <br>
+</i></span></span><span
+style='position:absolute;top:58.55%;left:4.23%;width:95.76%'><span
+style='font-size:86%'><i>www.webqtl.org/search.html</i></span><span
+style='font-size:68%;mso-special-format:lastCR;display:none'><i><br>
+</i></span></span></div>
+</div>
+<div style='position:absolute;top:31.62%;left:5.43%;width:73.24%;height:45.05%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=B style='position:absolute;top:0%;left:2.71%;width:97.28%;
+height:93.33%'>
+<div style='mso-line-spacing:" 0 ";mso-margin-left-alt:348;mso-text-indent-alt:
+56;position:absolute;top:0%;left:0%;width:89.77%;height:39.91%'><span
+style='position:absolute;top:0%;left:0%;width:100.0%'><span style='mso-special-format:
+nobullet;display:none;color:#FBFDB8;font-family:"Monotype Sorts";font-size:
+99%'>l</span><span style='font-size:94%;color:#E9EB5D;mso-color-index:3'>Part
+1: How to discover shared </span></span><span style='position:absolute;
+top:30.52%;left:7.86%;width:86.54%'><span style='font-size:94%;color:#E9EB5D;
+mso-color-index:3'>expression patterns (slides </span></span><span
+style='position:absolute;top:61.05%;left:7.86%;width:86.54%'><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3'>2�14)<br>
+</span></span></div>
+<div style='mso-line-spacing:" 0 ";mso-margin-left-alt:348;mso-text-indent-alt:
+56;position:absolute;top:48.31%;left:0%;width:84.94%;height:27.73%'><span
+style='position:absolute;top:0%;left:0%;width:100.0%'><span style='mso-special-format:
+nobullet;display:none;color:#FBFDB8;font-family:"Monotype Sorts";font-size:
+99%'>l</span><span style='font-size:94%;color:#E9EB5D;mso-color-index:3'>Part
+2. Discovering upstream </span></span><span style='position:absolute;
+top:43.93%;left:8.31%;width:91.46%'><span style='font-size:94%;color:#E9EB5D;
+mso-color-index:3'>modulators (15�25)<br>
+</span></span></div>
+<div style='mso-line-spacing:" 0 &#1;";mso-margin-left-alt:348;mso-text-indent-alt:
+56;position:absolute;top:84.45%;left:0%;width:100.0%;height:15.54%'><span
+style='position:absolute;top:0%;left:7.06%;width:92.93%'><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:
+"numbullet3\,3";color:#FBFDB8;position:absolute;left:-7.6%;font-family:Times;
+font-size:99%'>3.</span></span><span style='font-size:94%;color:#E9EB5D;
+mso-color-index:3'>Discovering downstream targets</span></span></div>
+</div>
+</div>
+<img border=0 src="slide0001_image001.gif" style='position:absolute;top:21.9%;
+left:74.56%;width:23.57%;height:64.31%'>
+<div class=O style='position:absolute;top:79.32%;left:75.89%;width:10.46%;
+height:14.48%'>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:42.68%'><span
+style='font-family:"Arial Rounded MT Bold";font-size:233%;color:#6E6E6E'>RNA</span><span
+style='font-family:"Arial Rounded MT Bold";font-size:300%;color:#6E6E6E;
+display:none'><br>
+</span></div>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:46.34%;left:0%;width:82.27%;height:54.87%'><span
+style='font-family:"Arial Rounded MT Bold";font-size:300%;color:#6E6E6E;
+mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+<div class=O style='position:absolute;top:76.5%;left:4.37%;width:78.67%;
+height:13.07%'><span style='position:absolute;top:0%;left:0%;width:98.98%'><span
+style='font-family:"Gill Sans";font-size:250%;color:#E9EB5D;mso-color-index:
+3'><i>PowerPoint �Normal view� has notes that </i></span></span><span
+style='position:absolute;top:51.35%;left:0%;width:100.0%'><span
+style='font-family:"Gill Sans";font-size:250%;color:#E9EB5D;mso-color-index:
+3'><i>may be useful companions to these slides.</i></span><span
+style='font-family:"Gill Sans";font-size:250%;color:#E9EB5D;mso-color-index:
+3;mso-special-format:lastCR;display:none'><br>
+</span></span></div>
+</div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Welcome to a short
+  demonstation of WebQTL. Please adjust the wize of windows on your monitor so
+  that you can see part of this page as well as WebQTL windows. WebQTL will
+  produce a potentially large number of new windows (pop-ups), so you may need
+  to modify your browser preferences to permit pop-ups.<span
+  style="mso-spacerun: yes">&nbsp;&nbsp; </span>In this demonstration, we
+  explore one important transcript expressed in the brain: the amyloid beta
+  precursor protein messenger RNA. The product of this mRNA, the APP protein,
+  is associated with Alzheimer disease.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>(Initial version of June
+  2003 by Rob Williams, Last edits June 16, 2003 by RW.)</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0001_image001.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0001_image001.gif
new file mode 100755
index 00000000..5bcd338f
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0001_image001.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0001_notes_pane.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0001_notes_pane.htm
new file mode 100755
index 00000000..0df634c1
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0001_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Welcome to a short
+  demonstation of WebQTL. Please adjust the wize of windows on your monitor so
+  that you can see part of this page as well as WebQTL windows. WebQTL will
+  produce a potentially large number of new windows (pop-ups), so you may need
+  to modify your browser preferences to permit pop-ups.<span
+  style="mso-spacerun: yes">&nbsp;&nbsp; </span>In this demonstration, we
+  explore one important transcript expressed in the brain: the amyloid beta
+  precursor protein messenger RNA. The product of this mRNA, the APP protein,
+  is associated with Alzheimer disease.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>(Initial version of June
+  2003 by Rob Williams, Last edits June 16, 2003 by RW.)</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0002.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0002.htm
new file mode 100755
index 00000000..2efd97f9
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0002.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jun-19-03>
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0002.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.gif" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:6.89%;left:2.78%;width:93.77%;height:14.66%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=B style='mso-line-spacing:" 0 ";mso-margin-left-alt:348;mso-text-indent-alt:
+56;position:absolute;top:0%;left:2.11%;width:96.46%;height:50.6%'><span
+style='mso-special-format:nobullet;display:none;color:#FBFDB8;font-family:"Monotype Sorts";
+font-size:99%'>l</span><span style='font-size:106%;color:#E9EB5D;mso-color-index:
+3'>or webqtl.org/search.html (mirror)</span></div>
+</div>
+<img border=0 src="slide0002_image002.gif" style='position:absolute;top:16.6%;
+left:2.51%;width:71.65%;height:81.27%'><img border=0
+src="slide0002_image003.gif" style='position:absolute;top:49.82%;left:42.38%;
+width:20.39%;height:7.59%'><img border=0 src="slide0002_image004.gif"
+style='position:absolute;top:50.35%;left:62.78%;width:15.09%;height:36.74%'>
+<div class=O style='position:absolute;top:60.42%;left:79.33%;width:15.76%;
+height:11.48%'>
+<div style='position:absolute;top:0%;left:0%;width:100.0%;height:49.23%'><span
+style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;mso-color-index:
+3'>choose a<br>
+</span></div>
+<div style='position:absolute;top:50.76%;left:0%;width:96.63%;height:49.23%'><span
+style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;mso-color-index:
+3'>database</span></div>
+</div>
+<div class=O style='position:absolute;top:46.46%;left:79.33%;width:21.05%;
+height:11.48%'>
+<div style='position:absolute;top:0%;left:0%;width:89.93%;height:49.23%'><span
+style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;mso-color-index:
+3'>enter<br>
+</span></div>
+<div style='position:absolute;top:50.76%;left:0%;width:100.0%;height:49.23%'><span
+style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;mso-color-index:
+3'><i>amyloid beta</i></span><span style='font-family:"Gill Sans";font-size:
+250%;color:#E9EB5D;mso-color-index:3;mso-special-format:lastCR;display:none'><i><br>
+</i></span></div>
+</div>
+<div class=O style='position:absolute;top:78.26%;left:79.73%;width:11.52%;
+height:11.48%'>
+<div style='position:absolute;top:0%;left:0%;width:89.65%;height:49.23%'><span
+style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;mso-color-index:
+3'>select<br>
+</span></div>
+<div style='position:absolute;top:50.76%;left:0%;width:100.0%;height:49.23%'><span
+style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;mso-color-index:
+3'>search</span></div>
+</div>
+<div style='position:absolute;top:.88%;left:3.31%;width:93.77%;height:9.36%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div style='position:absolute;top:0%;left:1.12%;width:97.45%;height:79.24%'>
+<div class=B1 style='mso-margin-left-alt:644;mso-text-indent-alt:420'></div>
+<div class=B2 style='mso-margin-left-alt:937;mso-text-indent-alt:716'></div>
+<div class=B3 style='mso-margin-left-alt:1232;mso-text-indent-alt:1009'></div>
+<div class=B4 style='mso-margin-left-alt:1544;mso-text-indent-alt:1304'></div>
+<div class=B style='mso-line-spacing:" 0 ";mso-margin-left-alt:348;mso-text-indent-alt:
+0;position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'><span
+style='mso-special-format:nobullet;display:none;color:#FBFDB8;font-family:"Monotype Sorts";
+font-size:99%'>l</span><span style='font-size:106%;color:#E9EB5D;mso-color-index:
+3'>link to www.webqtl.org/search.html</span></div>
+</div>
+</div>
+</div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>WebQTL can be used to
+  enter your own trait data or to work with data that we have entered for you.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Linking to
+  http://www.webqtl.org/search.html will get you a version of the window above.
+  It may not be identical in layout but it will have the key features. Please
+  follow the intructions on the slide. Of course, we encourage you to enter
+  your own terms of interest.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Two points: If you make
+  a search term too complex you may get no hits. if you make it too simple (for
+  example, APP) then you may get too much. Experiment.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>If you just link to</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>http://www.webqtl.org
+  you will NOT see the window above but will see text that will help you to
+  enter your own data.<span style="mso-spacerun: yes">&nbsp; </span>To get to a
+  version of the window shown above you will need to click on the phrase<span
+  style="mso-spacerun: yes">&nbsp; </span>RNA expression and Phenotype
+  Databases in the upper banner.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>If you do not get a new
+  page within 30 seconds then there is<span style="mso-spacerun: yes">&nbsp;
+  </span>a problem: try the mirror site http://webqtl.org/search.html.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0002_image002.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0002_image002.gif
new file mode 100755
index 00000000..304daa18
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0002_image002.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0002_image003.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0002_image003.gif
new file mode 100755
index 00000000..74f73adc
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0002_image003.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0002_image004.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0002_image004.gif
new file mode 100755
index 00000000..1da7043d
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0002_image004.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0002_notes_pane.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0002_notes_pane.htm
new file mode 100755
index 00000000..266bf3fb
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0002_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>WebQTL can be used to
+  enter your own trait data or to work with data that we have entered for you.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Linking to
+  http://www.webqtl.org/search.html will get you a version of the window above.
+  It may not be identical in layout but it will have the key features. Please
+  follow the intructions on the slide. Of course, we encourage you to enter
+  your own terms of interest.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Two points: If you make
+  a search term too complex you may get no hits. if you make it too simple (for
+  example, APP) then you may get too much. Experiment.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>If you just link to</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>http://www.webqtl.org
+  you will NOT see the window above but will see text that will help you to
+  enter your own data.<span style="mso-spacerun: yes">&nbsp; </span>To get to a
+  version of the window shown above you will need to click on the phrase<span
+  style="mso-spacerun: yes">&nbsp; </span>RNA expression and Phenotype
+  Databases in the upper banner.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>If you do not get a new
+  page within 30 seconds then there is<span style="mso-spacerun: yes">&nbsp;
+  </span>a problem: try the mirror site http://webqtl.org/search.html.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0003.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0003.htm
new file mode 100755
index 00000000..7e0f4be9
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0003.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content="Jun-19-03: Search results">
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0003.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.gif" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'><img
+border=0 src="slide0003_image005.gif" style='position:absolute;top:9.36%;
+left:9.13%;width:59.73%;height:87.45%'><img border=0
+src="slide0003_image006.gif" style='position:absolute;top:72.26%;left:14.03%;
+width:62.51%;height:6.53%'>
+<div class=O style='position:absolute;top:68.37%;left:78.54%;width:21.05%;
+height:17.31%'>
+<div style='position:absolute;top:0%;left:0%;width:89.93%;height:32.65%'><span
+style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;mso-color-index:
+3'>highlight<br>
+</span></div>
+<div style='position:absolute;top:33.67%;left:0%;width:100.0%;height:32.65%'><span
+style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;mso-color-index:
+3'><i>amyloid beta<br>
+</i></span></div>
+<div style='position:absolute;top:67.34%;left:0%;width:89.93%;height:32.65%'><span
+style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;mso-color-index:
+3'>then click</span><span style='font-family:"Gill Sans";font-size:250%;
+color:#E9EB5D;mso-color-index:3;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+<div style='position:absolute;top:-4.59%;left:7.81%;width:84.9%;height:18.55%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='position:absolute;top:24.76%;left:1.56%;width:96.87%;
+height:46.66%'><span style='font-size:91%'>Search results</span><span
+style='mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>If all goes well, you
+  will see a version of this window. WebQTL will display up to about 100 hits.
+  If a search generates larger numbers of hits then you will need to refine
+  your search terms.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0003_image005.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0003_image005.gif
new file mode 100755
index 00000000..5c7d29e8
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0003_image005.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0003_image006.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0003_image006.gif
new file mode 100755
index 00000000..f75379b9
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0003_image006.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0003_notes_pane.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0003_notes_pane.htm
new file mode 100755
index 00000000..5dbbbd2e
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0003_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>If all goes well, you
+  will see a version of this window. WebQTL will display up to about 100 hits.
+  If a search generates larger numbers of hits then you will need to refine
+  your search terms.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0004.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0004.htm
new file mode 100755
index 00000000..9980cf8b
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0004.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jun-19-03>
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0004.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.gif" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:1.41%;left:1.72%;width:97.61%;height:14.66%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=B style='mso-line-spacing:" 0 ";mso-margin-left-alt:348;mso-text-indent-alt:
+56;position:absolute;top:0%;left:2.03%;width:97.96%;height:50.6%'><span
+style='mso-special-format:nobullet;display:none;color:#FBFDB8;font-family:"Monotype Sorts";
+font-size:99%'>l</span><span style='font-size:106%;color:#E9EB5D;mso-color-index:
+3'>First page of data: The �Trait Data Form�</span></div>
+</div>
+<img border=0 src="slide0004_image007.gif" style='position:absolute;top:11.13%;
+left:3.31%;width:77.61%;height:86.39%'><img border=0
+src="slide0004_image008.gif" style='position:absolute;top:56.0%;left:66.88%;
+width:14.7%;height:7.42%'>
+<div class=O style='position:absolute;top:50.7%;left:81.85%;width:20.0%;
+height:27.2%'>
+<div style='position:absolute;top:0%;left:0%;width:100.0%;height:20.12%'><span
+style='font-size:200%;color:#E9EB5D'><i>Click here<br>
+</i></span></div>
+<div style='position:absolute;top:19.48%;left:0%;width:83.44%;height:20.12%'><span
+style='font-size:200%;color:#E9EB5D'><i>to learn<br>
+</i></span></div>
+<div style='position:absolute;top:39.61%;left:0%;width:83.44%;height:20.12%'><span
+style='font-size:200%;color:#E9EB5D'><i>about<br>
+</i></span></div>
+<div style='position:absolute;top:59.09%;left:0%;width:83.44%;height:20.12%'><span
+style='font-size:200%;color:#E9EB5D'><i>data<br>
+</i></span></div>
+<div style='position:absolute;top:79.22%;left:0%;width:83.44%;height:20.12%'><span
+style='font-size:200%;color:#E9EB5D'><i>source</i></span></div>
+</div>
+</div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>The Trait Data and
+  Editing Form is the single more important page from the point of view of
+  working with WebQTL data. Please read the text carefully. Explore the links,
+  but do not close this page. We will need it many more times in this
+  demonstration.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0004_image007.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0004_image007.gif
new file mode 100755
index 00000000..db14d732
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0004_image007.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0004_image008.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0004_image008.gif
new file mode 100755
index 00000000..8ac35a66
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0004_image008.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0004_notes_pane.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0004_notes_pane.htm
new file mode 100755
index 00000000..22def119
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0004_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>The Trait Data and
+  Editing Form is the single more important page from the point of view of
+  working with WebQTL data. Please read the text carefully. Explore the links,
+  but do not close this page. We will need it many more times in this
+  demonstration.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0005.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0005.htm
new file mode 100755
index 00000000..ab904a72
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0005.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jun-19-03>
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0005.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.gif" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:1.41%;left:3.31%;width:96.29%;height:14.66%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=B style='mso-line-spacing:" 0 ";mso-margin-left-alt:348;mso-text-indent-alt:
+56;position:absolute;top:0%;left:2.06%;width:97.93%;height:50.6%'><span
+style='mso-special-format:nobullet;display:none;color:#FBFDB8;font-family:"Monotype Sorts";
+font-size:99%'>l</span><span style='font-size:106%;color:#E9EB5D;mso-color-index:
+3'>Data sources: Phenotpyes and genotypes</span></div>
+</div>
+<img border=0 src="slide0005_image009.gif" style='position:absolute;top:10.77%;
+left:7.68%;width:84.5%;height:88.33%'></div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>There are already five
+  databases in WebQTL. Each will eventually have a page like this describing
+  the data source and appropriate citations to these databases. The great
+  majority of data in WebQTL were generated in our own labs and those of our
+  collaborators.<span style="mso-spacerun: yes">&nbsp; </span>We welcome you to
+  use these data, but caution you that there are inevitably lots of little
+  problems and issues that may compromise some results. Be cautious and
+  skeptical. Ask us questions before you leap to publication. And please, if
+  you find the data useful or can verify or refute data, LET US KNOW. We would
+  like to add you to our reference section and add links to improvements.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0005_image009.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0005_image009.gif
new file mode 100755
index 00000000..a6596e12
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0005_image009.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0005_notes_pane.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0005_notes_pane.htm
new file mode 100755
index 00000000..916084ec
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0005_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>There are already five
+  databases in WebQTL. Each will eventually have a page like this describing
+  the data source and appropriate citations to these databases. The great
+  majority of data in WebQTL were generated in our own labs and those of our
+  collaborators.<span style="mso-spacerun: yes">&nbsp; </span>We welcome you to
+  use these data, but caution you that there are inevitably lots of little
+  problems and issues that may compromise some results. Be cautious and
+  skeptical. Ask us questions before you leap to publication. And please, if
+  you find the data useful or can verify or refute data, LET US KNOW. We would
+  like to add you to our reference section and add links to improvements.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0006.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0006.htm
new file mode 100755
index 00000000..f3d4d1d5
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0006.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jun-19-03>
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0006.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.gif" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:1.06%;left:1.72%;width:47.94%;height:7.24%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=B style='mso-line-spacing:" 0 ";mso-margin-left-alt:348;mso-text-indent-alt:
+56;position:absolute;top:4.87%;left:4.14%;width:95.85%;height:78.04%'><span
+style='mso-special-format:nobullet;display:none;color:#FBFDB8;font-family:"Monotype Sorts";
+font-size:99%'>l</span><span style='font-size:81%;color:#E9EB5D;mso-color-index:
+3'>Return to Trait Data page </span></div>
+</div>
+<img border=0 src="slide0006_image010.gif" style='position:absolute;top:7.77%;
+left:.79%;width:48.47%;height:79.32%'><img border=0 src="slide0006_image011.gif"
+style='position:absolute;top:7.77%;left:50.46%;width:48.6%;height:78.79%'>
+<div style='position:absolute;top:1.06%;left:52.45%;width:43.84%;height:13.78%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=B style='mso-line-spacing:" 0 ";mso-margin-left-alt:348;mso-text-indent-alt:
+56;position:absolute;top:2.56%;left:4.53%;width:92.44%;height:41.02%'><span
+style='mso-special-format:nobullet;display:none;color:#FBFDB8;font-family:"Monotype Sorts";
+font-size:99%'>l</span><span style='font-size:81%;color:#E9EB5D;mso-color-index:
+3'>bottom of this page</span></div>
+</div>
+<div class=O style='position:absolute;top:86.39%;left:3.44%;width:109.13%;
+height:11.48%'><span style='position:absolute;top:0%;left:0%;width:100.0%'><span
+style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;mso-color-index:
+3'>Trait data for each strain with SE when known. For array data </span></span><span
+style='position:absolute;top:50.76%;left:0%;width:99.02%'><span
+style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;mso-color-index:
+3'>the scale is ~ log base 2.<span style="mso-spacerun: yes">&nbsp;&nbsp;
+</span></span><span style='font-size:183%;color:#E9EB5D;mso-color-index:3'>F1=13.752
+= 2^13.752 = 13796 </span><span style='font-family:"Gill Sans";font-size:183%;
+color:#E9EB5D;mso-color-index:3;mso-special-format:lastCR;display:none'><br>
+</span></span></div>
+</div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>This<span
+  style="mso-spacerun: yes">&nbsp; </span>slide shows you the<span
+  style="mso-spacerun: yes">&nbsp; </span>lower parts of the Trait Data Page.
+  We expect to make many small modification of this page, so do not be
+  surprised if some elements have been moved around.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0006_image010.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0006_image010.gif
new file mode 100755
index 00000000..967e59ca
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0006_image010.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0006_image011.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0006_image011.gif
new file mode 100755
index 00000000..1e1432cf
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0006_image011.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0006_notes_pane.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0006_notes_pane.htm
new file mode 100755
index 00000000..be43575c
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0006_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>This<span
+  style="mso-spacerun: yes">&nbsp; </span>slide shows you the<span
+  style="mso-spacerun: yes">&nbsp; </span>lower parts of the Trait Data Page.
+  We expect to make many small modification of this page, so do not be
+  surprised if some elements have been moved around.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0007.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0007.htm
new file mode 100755
index 00000000..052d2dcf
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0007.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jun-19-03>
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0007.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.gif" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:1.41%;left:3.31%;width:93.77%;height:14.66%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=B style='mso-line-spacing:" 0 ";mso-margin-left-alt:348;mso-text-indent-alt:
+56;position:absolute;top:0%;left:2.11%;width:97.45%;height:50.6%'><span
+style='mso-special-format:nobullet;display:none;color:#FBFDB8;font-family:"Monotype Sorts";
+font-size:99%'>l</span><span style='font-size:106%;color:#E9EB5D;mso-color-index:
+3'>Discovering shared expression patterns</span></div>
+</div>
+<img border=0 src="slide0007_image012.gif" style='position:absolute;top:16.6%;
+left:5.03%;width:86.22%;height:55.47%'><img border=0
+src="slide0007_image013.gif" style='position:absolute;top:60.42%;left:45.82%;
+width:13.77%;height:14.84%'></div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Finally, we can now
+  start an analysis.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>We ask a simple
+  question:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Do differences in App
+  transcript expression correlate with those of any other transcripts in the
+  forebrain?</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0007_image012.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0007_image012.gif
new file mode 100755
index 00000000..9cde2f15
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0007_image012.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0007_image013.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0007_image013.gif
new file mode 100755
index 00000000..df9c9efb
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0007_image013.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0007_notes_pane.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0007_notes_pane.htm
new file mode 100755
index 00000000..7d2536da
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0007_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Finally, we can now
+  start an analysis.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>We ask a simple
+  question:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Do differences in App
+  transcript expression correlate with those of any other transcripts in the
+  forebrain?</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0008.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0008.htm
new file mode 100755
index 00000000..7b1d488d
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0008.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jun-19-03>
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0008.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.gif" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:1.41%;left:3.31%;width:93.77%;height:14.66%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=B style='mso-line-spacing:" 0 ";mso-margin-left-alt:348;mso-text-indent-alt:
+56;position:absolute;top:0%;left:2.11%;width:96.46%;height:50.6%'><span
+style='mso-special-format:nobullet;display:none;color:#FBFDB8;font-family:"Monotype Sorts";
+font-size:99%'>l</span><span style='font-size:106%;color:#E9EB5D;mso-color-index:
+3'>The </span><span style='font-size:106%;color:#E9EB5D;mso-color-index:3'><i>App</i></span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'> transcript neighborhood</span></div>
+</div>
+<img border=0 src="slide0008_image014.gif" style='position:absolute;top:10.77%;
+left:5.82%;width:66.62%;height:88.33%'>
+<div class=O style='position:absolute;top:30.74%;left:75.23%;width:26.22%;
+height:18.72%'><span style='position:absolute;top:0%;left:0%;width:91.91%'><span
+style='font-size:150%;color:#E9EB5D;mso-color-index:3'><b>Question: </b></span><span
+style='font-size:133%;color:#E9EB5D;mso-color-index:3'><b>How </b></span></span><span
+style='position:absolute;top:21.69%;left:0%;width:97.47%'><span
+style='font-size:133%;color:#E9EB5D;mso-color-index:3'><b>many transcripts </b></span></span><span
+style='position:absolute;top:40.56%;left:0%;width:100.0%'><span
+style='font-size:133%;color:#E9EB5D;mso-color-index:3'><b>have correlations </b></span></span><span
+style='position:absolute;top:59.43%;left:0%;width:97.97%'><span
+style='font-size:133%;color:#E9EB5D;mso-color-index:3'><b>&gt;0.7? What does </b></span></span><span
+style='position:absolute;top:79.24%;left:0%;width:85.35%'><span
+style='font-size:133%;color:#E9EB5D;mso-color-index:3'><b>this imply.</b></span></span></div>
+</div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>The answer is a strong
+  Yes. A very large number of transcripts have correlations above 0.7 (absolute
+  value) with App mRNA. The precise number today is 208. But this will change
+  as we add more strains and arrays. In any case, this is a fairly large number
+  and all of these correlations are significant at alpha .05 even when
+  correcting for the enormous numbers<span style="mso-spacerun: yes">&nbsp;
+  </span>of tests (12422 tests).</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>What does this imply?</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>That there can be
+  massive codependence of expression variance among transcripts. App is NOT an
+  isolated instance. This is improtant biologically and statistically. From a
+  statistical perspective, we would like to know how many �independent� test we
+  effectively are performing when we use array data in this way. Are we testing
+  12000 independent transcripts or just 1200 transcriptional �modules� each
+  with blurred boarders but each with about 10 effective members. There is no
+  answer yet, but we probaby have a large enough data set to begin to answer
+  this question.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0008_image014.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0008_image014.gif
new file mode 100755
index 00000000..d555e779
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0008_image014.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0008_notes_pane.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0008_notes_pane.htm
new file mode 100755
index 00000000..5003f4a6
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0008_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>The answer is a strong
+  Yes. A very large number of transcripts have correlations above 0.7 (absolute
+  value) with App mRNA. The precise number today is 208. But this will change
+  as we add more strains and arrays. In any case, this is a fairly large number
+  and all of these correlations are significant at alpha .05 even when
+  correcting for the enormous numbers<span style="mso-spacerun: yes">&nbsp;
+  </span>of tests (12422 tests).</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>What does this imply?</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>That there can be
+  massive codependence of expression variance among transcripts. App is NOT an
+  isolated instance. This is improtant biologically and statistically. From a
+  statistical perspective, we would like to know how many �independent� test we
+  effectively are performing when we use array data in this way. Are we testing
+  12000 independent transcripts or just 1200 transcriptional �modules� each
+  with blurred boarders but each with about 10 effective members. There is no
+  answer yet, but we probaby have a large enough data set to begin to answer
+  this question.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0009.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0009.htm
new file mode 100755
index 00000000..82b93d4f
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0009.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jun-19-03>
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0009.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.gif" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:2.47%;left:6.62%;width:94.17%;height:14.66%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=B style='mso-line-spacing:" 0 ";mso-margin-left-alt:348;mso-text-indent-alt:
+56;position:absolute;top:0%;left:2.1%;width:98.03%;height:50.6%'><span
+style='mso-special-format:nobullet;display:none;color:#FBFDB8;font-family:"Monotype Sorts";
+font-size:99%'>l</span><span style='font-size:106%;color:#E9EB5D;mso-color-index:
+3'>Handdrawn sketch of the neighborhood</span></div>
+</div>
+<img border=0 src="slide0009_image015.gif" style='position:absolute;top:13.07%;
+left:9.53%;width:80.79%;height:80.38%'></div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Many of the data types
+  in the previous slide are hot-linked and it is easy to generate a small web
+  of correlations between any transcript of interest and many other
+  transcripts. In this case, we have used green lines between transcripts that
+  have positive correlations, and red lines between transcripts that have
+  negative correlations. Correlations have been multiplied by 100. The
+  correlation of 0.96 between App and Hsp84-1 reads 96.<span
+  style="mso-spacerun: yes">&nbsp; </span>These are Pearson product moment
+  correlations and they are sensitive to outliers. If you prefer, you can
+  recompute Spearman rank order correlations.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Where did Ndr4 (lower
+  left) come from? It is not in the list in the previous slide. Actually it is.
+  Nomenclature changes rapidly. If you click on R74996 in the previous slide
+  (the active webqtl version) you will see that it now has a new symbol and
+  name.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>What are all of the<span
+  style="mso-spacerun: yes">&nbsp; </span>conventions in this correlation
+  network sketch.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Times size=3>1.</font><font
+  face=Helvetica size=3>The official gene symbol = App</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>2. OUr estimate of the
+  location of these gene in the Mouse Genome Sequencing Consoritum version 3
+  build (MGSCv3). Chromosome followed by the megabase position relative to the
+  centromere. (Mice only have one chromosome arm so this is an unambiguous
+  coordinate. )</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>3. The pair of numbers:
+  top is the highest expression among the strain set. The lower number is the
+  lowest expression of that transcript among the strain set.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>4. Vertical number on
+  the right side of each box: this is the probe set ID given by Affymetrix. We
+  have truncated these probe set IDs so you will not see the usual<span
+  style="mso-spacerun: yes">&nbsp; </span>�at�. A single gene may be
+  represented by more than 10 probe sets. Thus this ID number is essential to
+  identify the actual data source.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>5. Lower right corner: a
+  two digit number followed by plus and minus signs. These numbers are the
+  correlation value (absolute value) of the 100th best correlated transcript.
+  The plus and minus signs indicate the mean polarity of the correlations.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>6. The set of numbers
+  that read 2@140* etc. These are the approximate locations of additive effect
+  QTLs detected by WebQTL that we will describe in other slides. Read this as:
+  App has a suggestive QTL on Chr 2 at about 140 Mb and the D allele inherited
+  from DBA/2J confirms a higher expression level at this marker.<span
+  style="mso-spacerun: yes">&nbsp; </span>If there is no star symbol, then it
+  is not even formally �suggestive� but does make an interesting looking blip
+  on the QTL radar screen.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0009_image015.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0009_image015.gif
new file mode 100755
index 00000000..4e9f96be
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0009_image015.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0009_notes_pane.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0009_notes_pane.htm
new file mode 100755
index 00000000..bdcc6cd9
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0009_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Many of the data types
+  in the previous slide are hot-linked and it is easy to generate a small web
+  of correlations between any transcript of interest and many other
+  transcripts. In this case, we have used green lines between transcripts that
+  have positive correlations, and red lines between transcripts that have
+  negative correlations. Correlations have been multiplied by 100. The
+  correlation of 0.96 between App and Hsp84-1 reads 96.<span
+  style="mso-spacerun: yes">&nbsp; </span>These are Pearson product moment
+  correlations and they are sensitive to outliers. If you prefer, you can
+  recompute Spearman rank order correlations.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Where did Ndr4 (lower
+  left) come from? It is not in the list in the previous slide. Actually it is.
+  Nomenclature changes rapidly. If you click on R74996 in the previous slide
+  (the active webqtl version) you will see that it now has a new symbol and
+  name.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>What are all of the<span
+  style="mso-spacerun: yes">&nbsp; </span>conventions in this correlation
+  network sketch.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Times size=2>1.</font><font
+  face=Helvetica size=2>The official gene symbol = App</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>2. OUr estimate of the
+  location of these gene in the Mouse Genome Sequencing Consoritum version 3
+  build (MGSCv3). Chromosome followed by the megabase position relative to the
+  centromere. (Mice only have one chromosome arm so this is an unambiguous
+  coordinate. )</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>3. The pair of numbers:
+  top is the highest expression among the strain set. The lower number is the
+  lowest expression of that transcript among the strain set.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>4. Vertical number on
+  the right side of each box: this is the probe set ID given by Affymetrix. We
+  have truncated these probe set IDs so you will not see the usual<span
+  style="mso-spacerun: yes">&nbsp; </span>�at�. A single gene may be
+  represented by more than 10 probe sets. Thus this ID number is essential to
+  identify the actual data source.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>5. Lower right corner: a
+  two digit number followed by plus and minus signs. These numbers are the
+  correlation value (absolute value) of the 100th best correlated transcript.
+  The plus and minus signs indicate the mean polarity of the correlations.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>6. The set of numbers
+  that read 2@140* etc. These are the approximate locations of additive effect
+  QTLs detected by WebQTL that we will describe in other slides. Read this as:
+  App has a suggestive QTL on Chr 2 at about 140 Mb and the D allele inherited
+  from DBA/2J confirms a higher expression level at this marker.<span
+  style="mso-spacerun: yes">&nbsp; </span>If there is no star symbol, then it
+  is not even formally �suggestive� but does make an interesting looking blip
+  on the QTL radar screen.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0010.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0010.htm
new file mode 100755
index 00000000..07768218
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0010.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jun-19-03>
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0010.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.gif" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:1.41%;left:3.31%;width:107.54%;height:14.66%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=B style='mso-line-spacing:" 0 ";mso-margin-left-alt:348;mso-text-indent-alt:
+56;position:absolute;top:0%;left:1.84%;width:98.15%;height:85.54%'><span
+style='position:absolute;top:0%;left:0%;width:100.0%'><span style='mso-special-format:
+nobullet;display:none;color:#FBFDB8;font-family:"Monotype Sorts";font-size:
+99%'>l</span><span style='font-size:106%;color:#E9EB5D;mso-color-index:3'>What
+a network is likely to look like (but </span><span style='font-size:106%;
+color:#E9EB5D;mso-color-index:3'><i>App</i></span><span style='font-size:106%;
+color:#E9EB5D;mso-color-index:3'> </span></span><span style='position:absolute;
+top:39.43%;left:4.76%;width:80.92%'><span style='font-size:106%;color:#E9EB5D;
+mso-color-index:3'>will not be center of universe).</span></span></div>
+</div>
+<img border=0 src="slide0010_image016.gif" style='position:absolute;top:15.19%;
+left:6.35%;width:71.92%;height:82.5%'>
+<div class=O style='position:absolute;top:32.86%;left:45.82%;width:5.96%;
+height:3.71%'><span style='font-size:133%;color:#FF0F0F'><b><i>App</i></b></span></div>
+</div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>What networks are likely
+  to really look like. This slide is taken from Lumeta Inc.<span
+  style="mso-spacerun: yes">&nbsp; </span>(www.lumeta.com). It actually
+  illustrates the structure of connections across the<span style="mso-spacerun:
+  yes">&nbsp; </span>Internet. The large green area is a major Internet
+  provider (WorldCom before the fall?).<span style="mso-spacerun: yes">&nbsp;
+  </span>Check<span style="mso-spacerun: yes">&nbsp; </span>out Lumeta to see
+  some more lovely graphs of this sort. Most biologists are familiar with
+  simple sketches, but this is what we will have to be prepared to contend with
+  soon.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0010_image016.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0010_image016.gif
new file mode 100755
index 00000000..6bec6eee
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0010_image016.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0010_notes_pane.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0010_notes_pane.htm
new file mode 100755
index 00000000..2b497618
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0010_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>What networks are likely
+  to really look like. This slide is taken from Lumeta Inc.<span
+  style="mso-spacerun: yes">&nbsp; </span>(www.lumeta.com). It actually
+  illustrates the structure of connections across the<span style="mso-spacerun:
+  yes">&nbsp; </span>Internet. The large green area is a major Internet
+  provider (WorldCom before the fall?).<span style="mso-spacerun: yes">&nbsp;
+  </span>Check<span style="mso-spacerun: yes">&nbsp; </span>out Lumeta to see
+  some more lovely graphs of this sort. Most biologists are familiar with
+  simple sketches, but this is what we will have to be prepared to contend with
+  soon.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0011.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0011.htm
new file mode 100755
index 00000000..0da85156
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0011.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Jun-19-03: Are there experimental results to corroborate a link between App with Hsp84-1?">
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0011.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.gif" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:3.53%;left:2.11%;width:97.48%;height:21.02%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='mso-line-spacing:" 0 &#1;";mso-margin-left-alt:232;
+mso-text-indent-alt:0;position:absolute;top:18.48%;left:.95%;width:99.04%;
+height:61.34%'><span style='position:absolute;top:0%;left:0%;width:100.0%'><span
+style='font-size:68%'><i>Are there experimental results to corroborate a link </i></span></span><span
+style='position:absolute;top:49.31%;left:4.25%;width:90.12%'><span
+style='font-size:68%'><i>between App with Hsp84-1?</i></span></span></div>
+</div>
+<div style='position:absolute;top:82.15%;left:4.1%;width:96.42%;height:18.55%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'></div>
+<div class=O style='position:absolute;top:29.5%;left:4.37%;width:99.33%;
+height:13.07%'><span style='position:absolute;top:0%;left:0%;width:100.0%'><span
+style='font-family:"Gill Sans";font-size:250%;color:#E9EB5D'><i>Yes: Heat shock
+84-1 induces the expression of App, </i></span></span><span style='position:
+absolute;top:51.35%;left:0%;width:85.33%'><span style='font-family:"Gill Sans";
+font-size:250%;color:#E9EB5D'><i>ubiquitin, and pyruvate kinase</i></span></span></div>
+<div class=O style='position:absolute;top:50.88%;left:5.16%;width:95.23%;
+height:19.78%'><span style='position:absolute;top:0%;left:0%;width:100.0%'><span
+style='font-family:"Gill Sans";font-size:250%;color:#E9EB5D'><i>Having
+�confirmed� these known relations, we can </i></span></span><span
+style='position:absolute;top:33.92%;left:0%;width:99.72%'><span
+style='font-family:"Gill Sans";font-size:250%;color:#E9EB5D'><i>now add new
+members to this family: Atp6l, Gnas, </i></span></span><span style='position:
+absolute;top:67.85%;left:0%;width:89.01%'><span style='font-family:"Gill Sans";
+font-size:250%;color:#E9EB5D'><i>Ndr4. A thin veneer of functional genomics.</i></span></span></div>
+</div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Having worked with
+  WebQTL now for 30 minutes, do we know anything new? The hypothesis that we
+  have generated (but not validated) is that three transcripts: Atp6l, Gnas,
+  and Ndr4 are part of a family of genes that are coregulated in normal mouse
+  forebrain with App and Hsp84-1. We need to add functional and mechanistic
+  significance to this hypothesis to make it biologically vibrant. But from a
+  statiistical standpoint it is a strong inference.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Please don�t say: But
+  these are mere correlations. A high correlation in this context has a
+  biological basis. The real question is are we smart enough to understand the
+  web (not chain) of causality that produced the correlation. Once we
+  understand the web of causality, does it have utility? Very often the answer
+  will be NO. This will often be the case when a high correlation is generated
+  by linkage disequilibrium of sets of polymorphisms that modulate a set of
+  mechanistically separated traits. Chromosomal linkage can produce
+  correlations that are not mechanistic in the conventional sense used by
+  molecular biologists. For example, clusters<span style="mso-spacerun:
+  yes">&nbsp; </span>of hox transcription factor genes tend to be close
+  physically to keratin gene clusters, and one might expect shared patterns of
+  variance produced by this linkage in a mapping panel, no matter how large.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>If Affymetrix designed
+  probe sets with reasonable care, if we did the experiments correctly, if we
+  sampled animals appropriately, then a correlation of 0.70 or higher between
+  transcripts in the brain tells you that these two transcripts are effectively
+  coupled in this set of animals under this set of conditions. More than 50%
+  the variance in the expression of one transcript can be predicted from the
+  other. That is a major piece of information that could be of significant
+  clinical, economic, and predictive value, whatever its causes. Yes,
+  correlation coefficients are noisy and have large error terms, but we have
+  larger n of strains coming to the rescue. Expect more than 50 BXD lines soon.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>This is a thin veneer of
+  functional genomics. It is enough to generate some marvelous hypotheses in a
+  semi-automated way.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0011_notes_pane.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0011_notes_pane.htm
new file mode 100755
index 00000000..214c9e08
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0011_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Having worked with
+  WebQTL now for 30 minutes, do we know anything new? The hypothesis that we
+  have generated (but not validated) is that three transcripts: Atp6l, Gnas,
+  and Ndr4 are part of a family of genes that are coregulated in normal mouse
+  forebrain with App and Hsp84-1. We need to add functional and mechanistic
+  significance to this hypothesis to make it biologically vibrant. But from a
+  statiistical standpoint it is a strong inference.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Please don�t say: But
+  these are mere correlations. A high correlation in this context has a
+  biological basis. The real question is are we smart enough to understand the
+  web (not chain) of causality that produced the correlation. Once we
+  understand the web of causality, does it have utility? Very often the answer
+  will be NO. This will often be the case when a high correlation is generated
+  by linkage disequilibrium of sets of polymorphisms that modulate a set of
+  mechanistically separated traits. Chromosomal linkage can produce
+  correlations that are not mechanistic in the conventional sense used by
+  molecular biologists. For example, clusters<span style="mso-spacerun:
+  yes">&nbsp; </span>of hox transcription factor genes tend to be close
+  physically to keratin gene clusters, and one might expect shared patterns of
+  variance produced by this linkage in a mapping panel, no matter how large.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>If Affymetrix designed
+  probe sets with reasonable care, if we did the experiments correctly, if we
+  sampled animals appropriately, then a correlation of 0.70 or higher between
+  transcripts in the brain tells you that these two transcripts are effectively
+  coupled in this set of animals under this set of conditions. More than 50%
+  the variance in the expression of one transcript can be predicted from the
+  other. That is a major piece of information that could be of significant
+  clinical, economic, and predictive value, whatever its causes. Yes,
+  correlation coefficients are noisy and have large error terms, but we have
+  larger n of strains coming to the rescue. Expect more than 50 BXD lines soon.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>This is a thin veneer of
+  functional genomics. It is enough to generate some marvelous hypotheses in a
+  semi-automated way.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0012.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0012.htm
new file mode 100755
index 00000000..3dae7024
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0012.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jun-19-03>
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0012.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.gif" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:1.41%;left:3.31%;width:105.43%;height:14.66%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=B style='mso-line-spacing:" 0 ";mso-margin-left-alt:292;mso-text-indent-alt:
+0;position:absolute;top:0%;left:1.0%;width:98.99%;height:50.6%'><span
+style='mso-special-format:nobullet;display:none;color:#FBFDB8;font-family:"Monotype Sorts";
+font-size:99%'>l</span><span style='font-size:106%;color:#E9EB5D;mso-color-index:
+3'>2.45 billion scatter plots: </span><span style='font-size:94%;color:#E9EB5D;
+mso-color-index:3'>here is one of the best</span></div>
+</div>
+<img border=0 src="slide0012_image017.gif" style='position:absolute;top:11.3%;
+left:6.62%;width:67.41%;height:82.68%'>
+<div class=O style='position:absolute;top:77.56%;left:41.19%;width:8.6%;
+height:7.42%'><span style='font-family:"Gill Sans";font-size:283%;color:#003399;
+mso-color-index:4'><i>App</i></span><span style='font-family:"Gill Sans";
+font-size:283%;color:#E9EB5D;mso-color-index:3;mso-special-format:lastCR;
+display:none'><i><br>
+</i></span></div>
+<img border=0 src="slide0012_image018.gif" alt="Text Box: Hsp84-1"
+style='position:absolute;top:36.04%;left:14.17%;width:6.88%;height:27.03%'></div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>The correlation between
+  App and heat shock protein 84-1 transcript is most impressive.<span
+  style="mso-spacerun: yes">&nbsp; </span>Since WebQTL now contains total of
+  about 70,000 traits in the BXD strains, we could produce as many as to 70k x
+  35k scatter plots of this type. Since all of the<span style="mso-spacerun:
+  yes">&nbsp; </span>correlations come for a common reference population,
+  none<span style="mso-spacerun: yes">&nbsp; </span>of the correlations are
+  blantantly silly. However the great majority may be uninterpretable and a
+  very large number may be meaningless given the signal-to-noise ratios of some
+  measurements. With about 30 strains, correlations above 0.7 have a reasonably
+  low false positive rate.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0012_image017.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0012_image017.gif
new file mode 100755
index 00000000..e72a2bed
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0012_image017.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0012_image018.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0012_image018.gif
new file mode 100755
index 00000000..7f4ca288
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0012_image018.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0012_notes_pane.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0012_notes_pane.htm
new file mode 100755
index 00000000..0380a033
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0012_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>The correlation between
+  App and heat shock protein 84-1 transcript is most impressive.<span
+  style="mso-spacerun: yes">&nbsp; </span>Since WebQTL now contains total of
+  about 70,000 traits in the BXD strains, we could produce as many as to 70k x
+  35k scatter plots of this type. Since all of the<span style="mso-spacerun:
+  yes">&nbsp; </span>correlations come for a common reference population,
+  none<span style="mso-spacerun: yes">&nbsp; </span>of the correlations are
+  blantantly silly. However the great majority may be uninterpretable and a
+  very large number may be meaningless given the signal-to-noise ratios of some
+  measurements. With about 30 strains, correlations above 0.7 have a reasonably
+  low false positive rate.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0013.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0013.htm
new file mode 100755
index 00000000..223f93fb
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0013.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jun-19-03>
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0013.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.gif" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:1.41%;left:3.31%;width:93.77%;height:14.66%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=B style='mso-line-spacing:" 0 ";mso-margin-left-alt:348;mso-text-indent-alt:
+56;position:absolute;top:0%;left:2.11%;width:96.46%;height:50.6%'><span
+style='mso-special-format:nobullet;display:none;color:#FBFDB8;font-family:"Monotype Sorts";
+font-size:99%'>l</span><span style='font-size:106%;color:#E9EB5D;mso-color-index:
+3'>Cross-tissue type correlations</span></div>
+</div>
+<img border=0 src="slide0013_image019.gif" style='position:absolute;top:11.83%;
+left:4.1%;width:71.52%;height:46.64%'><img border=0 src="slide0013_image020.gif"
+style='position:absolute;top:60.95%;left:4.1%;width:89.93%;height:35.33%'></div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>We can compare App
+  expression inthe forebrain against transcript expression in hematopoietic
+  stem cells. Some of these correlations are significant, but it may be
+  difficult to discovery of shared genetic (linkage disequilibrium) or
+  molecular processes that give rise to these correlation.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>The GNF Hematopoietic
+  stem cell data belong to Gerald de Haan (University of Groningen) and Michael
+  Cooke (Genomics Institute of the Novartis Research Foundation).</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0013_image019.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0013_image019.gif
new file mode 100755
index 00000000..06da89a2
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0013_image019.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0013_image020.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0013_image020.gif
new file mode 100755
index 00000000..0f0c6e98
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0013_image020.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0013_notes_pane.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0013_notes_pane.htm
new file mode 100755
index 00000000..642ca80b
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0013_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>We can compare App
+  expression inthe forebrain against transcript expression in hematopoietic
+  stem cells. Some of these correlations are significant, but it may be
+  difficult to discovery of shared genetic (linkage disequilibrium) or
+  molecular processes that give rise to these correlation.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>The GNF Hematopoietic
+  stem cell data belong to Gerald de Haan (University of Groningen) and Michael
+  Cooke (Genomics Institute of the Novartis Research Foundation).</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0014.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0014.htm
new file mode 100755
index 00000000..c0c82256
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0014.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jun-19-03>
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0014.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.gif" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:1.41%;left:3.31%;width:107.81%;height:14.66%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=B style='mso-line-spacing:" 0 ";mso-margin-left-alt:348;mso-text-indent-alt:
+56;position:absolute;top:0%;left:1.84%;width:98.15%;height:85.54%'><span
+style='position:absolute;top:0%;left:0%;width:99.37%'><span style='mso-special-format:
+nobullet;display:none;color:#FBFDB8;font-family:"Monotype Sorts";font-size:
+99%'>l</span><span style='font-size:106%;color:#E9EB5D;mso-color-index:3'>Cross-modal
+correlations: From mRNA to to </span></span><span style='position:absolute;
+top:39.43%;left:4.75%;width:95.24%'><span style='font-size:106%;color:#E9EB5D;
+mso-color-index:3'>anatomy and to behavior and pharmacology</span></span></div>
+</div>
+<img border=0 src="slide0014_image021.gif" style='position:absolute;top:15.37%;
+left:6.62%;width:53.37%;height:34.62%'><img border=0
+src="slide0014_image022.gif" style='position:absolute;top:46.81%;left:17.35%;
+width:65.16%;height:53.0%'></div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Another example, but in
+  this case we are generating correlations between variation in transcript
+  levels with a database of approximately 430 published (and unpublished)
+  phenotypes from BXD strains. Notice that the N of strains is variable (from
+  21 to 28 above). Rank order statistics is more appropriate when N is under
+  30.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>The Published Phenotypes
+  database was prepared by Elissa Chesler and Robert Williams from data
+  extracted from the literature or sent to us for inclusion by our colleagues.
+  We especially thank John Crabbe (Oregon HSU) and Byron Jones (Pennsylvania
+  SU) for providing us with large pre-compiled data tables.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0014_image021.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0014_image021.gif
new file mode 100755
index 00000000..554d9257
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0014_image021.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0014_image022.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0014_image022.gif
new file mode 100755
index 00000000..6e967236
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0014_image022.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0014_notes_pane.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0014_notes_pane.htm
new file mode 100755
index 00000000..4750bc2e
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0014_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Another example, but in
+  this case we are generating correlations between variation in transcript
+  levels with a database of approximately 430 published (and unpublished)
+  phenotypes from BXD strains. Notice that the N of strains is variable (from
+  21 to 28 above). Rank order statistics is more appropriate when N is under
+  30.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>The Published Phenotypes
+  database was prepared by Elissa Chesler and Robert Williams from data
+  extracted from the literature or sent to us for inclusion by our colleagues.
+  We especially thank John Crabbe (Oregon HSU) and Byron Jones (Pennsylvania
+  SU) for providing us with large pre-compiled data tables.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0015.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0015.htm
new file mode 100755
index 00000000..5e01bacc
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0015.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Jun-19-03: WebQTL     link to  www.webqtl.org/search.html">
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0015.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.gif" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:3.0%;left:2.11%;width:96.42%;height:19.61%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='mso-line-spacing:" 0 &#1;";mso-margin-left-alt:232;
+mso-text-indent-alt:0;position:absolute;top:0%;left:.96%;width:97.39%;
+height:100.0%'><span style='position:absolute;top:0%;left:0%;width:100.0%'><span
+style='font-size:68%'><i>WebQTL<span style="mso-spacerun:
+yes">&nbsp;&nbsp;&nbsp; </span><br>
+</i></span></span><span style='position:
+absolute;top:32.43%;left:4.37%;width:95.76%'><span style='font-size:68%'><i>link
+to <br>
+</i></span></span><span style='position:absolute;top:58.55%;left:4.37%;
+width:95.76%'><span style='font-size:86%'><i>www.webqtl.org/search.html</i></span><span
+style='font-size:68%;mso-special-format:lastCR;display:none'><i><br>
+</i></span></span></div>
+</div>
+<div style='position:absolute;top:36.57%;left:2.51%;width:73.24%;height:45.05%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=B style='position:absolute;top:0%;left:2.71%;width:97.28%;
+height:81.96%'>
+<div style='mso-line-spacing:" 0 ";mso-margin-left-alt:348;mso-text-indent-alt:
+56;position:absolute;top:0%;left:0%;width:94.6%;height:31.57%'><span
+style='position:absolute;top:0%;left:7.46%;width:92.53%'><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:
+"numbullet3\,1";color:#FBFDB8;position:absolute;left:-8.06%;font-family:Times;
+font-size:99%'>1.</span></span><span style='font-size:94%;color:#E9EB5D;
+mso-color-index:3'>Discovering shared expression </span></span><span
+style='position:absolute;top:43.93%;left:7.46%;width:82.12%'><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3'>patterns<br>
+</span></span></div>
+<div style='mso-line-spacing:" 0 ";mso-margin-left-alt:348;mso-text-indent-alt:
+56;position:absolute;top:41.14%;left:0%;width:84.94%;height:31.57%'><span
+style='position:absolute;top:0%;left:8.31%;width:91.46%'><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:
+"numbullet3\,2";color:#FBFDB8;position:absolute;left:-9.09%;font-family:Times;
+font-size:99%'>2.</span></span><span style='font-size:94%;color:#E9EB5D;
+mso-color-index:3'>Discovering upstream </span></span><span style='position:
+absolute;top:43.93%;left:8.31%;width:91.46%'><span style='font-size:94%;
+color:#E9EB5D;mso-color-index:3'>modulators (QTLs)<br>
+</span></span></div>
+<div style='mso-line-spacing:" 0 &#1;";mso-margin-left-alt:348;mso-text-indent-alt:
+56;position:absolute;top:82.29%;left:0%;width:100.0%;height:17.7%'><span
+style='position:absolute;top:0%;left:7.06%;width:92.75%'><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:
+"numbullet3\,3";color:#FBFDB8;position:absolute;left:-7.61%;font-family:Times;
+font-size:99%'>3.</span></span><span style='font-size:94%;color:#E9EB5D;
+mso-color-index:3'>Discovering downstream targets</span></span></div>
+</div>
+</div>
+<img border=0 src="slide0015_image023.gif" style='position:absolute;top:17.84%;
+left:74.17%;width:23.57%;height:64.31%'>
+<div class=O style='position:absolute;top:75.44%;left:74.56%;width:10.46%;
+height:14.48%'>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:42.68%'><span
+style='font-family:"Arial Rounded MT Bold";font-size:233%;color:#6E6E6E'>RNA</span><span
+style='font-family:"Arial Rounded MT Bold";font-size:300%;color:#6E6E6E;
+display:none'><br>
+</span></div>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:45.12%;left:0%;width:82.27%;height:54.87%'><span
+style='font-family:"Arial Rounded MT Bold";font-size:300%;color:#6E6E6E;
+mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+<div style='position:absolute;top:82.15%;left:4.1%;width:96.42%;height:18.55%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'></div>
+<img border=0 src="slide0015_image024.gif" style='position:absolute;top:51.94%;
+left:47.28%;width:26.35%;height:10.77%'></div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Part 2: Mapping upstream
+  modulators or QTLs. A quantitative trait locus is a chromosomal region that
+  harbors one or a few polymorphic gene loci that influence a trait. We are
+  going to be looking for QTLs that modulate the steady state expression level
+  of App in the adult mouse forebrain.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
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new file mode 100755
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new file mode 100755
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diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0015_notes_pane.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0015_notes_pane.htm
new file mode 100755
index 00000000..e17d3a52
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0015_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Part 2: Mapping upstream
+  modulators or QTLs. A quantitative trait locus is a chromosomal region that
+  harbors one or a few polymorphic gene loci that influence a trait. We are
+  going to be looking for QTLs that modulate the steady state expression level
+  of App in the adult mouse forebrain.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0016.htm
new file mode 100755
index 00000000..22b9419b
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jun-19-03>
+<link rel=Stylesheet href="master05_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0016.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master05_background.gif" v:shapes="_x0000_s3075"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div class=O style='position:absolute;top:92.93%;left:8.74%;width:18.67%;
+height:5.83%'>
+<div style='mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:48.48%'><span
+style='font-family:Times;font-size:117%;color:white;display:none'><br>
+</span></div>
+<div style='mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:51.51%;left:0%;width:100.0%;height:48.48%'><span
+style='font-family:Times;font-size:117%;color:white;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</div>
+<div class=O style='position:absolute;top:92.93%;left:35.49%;width:29.53%;
+height:5.83%'>
+<div style='text-align:center;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:0%;left:0%;width:100.0%;
+height:48.48%'><span style='font-family:Times;font-size:117%;color:white;
+display:none'><br>
+</span></div>
+<div style='text-align:center;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:51.51%;left:0%;width:100.0%;
+height:48.48%'><span style='font-family:Times;font-size:117%;color:white;
+mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+<div style='position:absolute;top:2.12%;left:-2.64%;width:105.82%;height:11.13%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:0%;left:0%;width:100.0%;height:88.88%'>
+<div style='text-align:center;mso-line-spacing:"&#1;%0 0 0";mso-margin-left-alt:
+16;mso-text-indent-alt:16;position:absolute;top:0%;left:0%;width:100.0%;
+height:67.85%'><span style='font-family:Arial;font-size:267%;color:#E9EB5D'><i>How
+to make recombinant inbred strains (RI)</i></span><span style='font-family:
+Arial;font-size:150%;color:aqua;display:none'><br>
+</span></div>
+<div style='text-align:center;mso-line-spacing:"&#1;%0 0 0";mso-margin-left-alt:
+16;mso-text-indent-alt:16;position:absolute;top:60.71%;left:6.25%;width:87.48%;
+height:39.28%'><span style='font-family:Arial;font-size:150%;color:aqua;
+mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<img border=0 src="slide0016_image025.gif" style='position:absolute;top:28.79%;
+left:45.43%;width:18.14%;height:1.06%'><img border=0
+src="slide0016_image026.gif" style='position:absolute;top:20.31%;left:28.21%;
+width:1.98%;height:11.83%'>
+<div style='position:absolute;top:15.01%;left:25.03%;width:19.47%;height:10.07%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:8.77%;left:6.8%;width:93.19%;
+height:78.94%'>
+<div style='mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:48.88%'><span
+style='font-family:Arial;font-size:150%;color:#FFFF99'>C57BL/6J (B)<br>
+</span></div>
+<div style='mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:51.11%;left:0%;width:83.21%;height:48.88%'><span
+style='font-family:Arial;font-size:150%;color:#FFFF99;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</div>
+</div>
+<img border=0 src="slide0016_image027.gif" style='position:absolute;top:20.31%;
+left:30.46%;width:1.98%;height:11.83%'>
+<div style='position:absolute;top:15.01%;left:62.25%;width:16.55%;height:10.07%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:8.77%;left:8.0%;width:92.8%;
+height:78.94%'>
+<div style='mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:48.88%'><span
+style='font-family:Arial;font-size:150%;color:#FFFF99'>DBA/2J (D)<br>
+</span></div>
+<div style='mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:51.11%;left:0%;width:82.75%;height:48.88%'><span
+style='font-family:Arial;font-size:150%;color:#FFFF99;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</div>
+</div>
+<img border=0 src="slide0016_image028.gif" style='position:absolute;top:20.31%;
+left:66.62%;width:4.23%;height:11.83%'><img border=0
+src="slide0016_image029.gif" style='position:absolute;top:35.51%;left:23.97%;
+width:50.86%;height:1.23%'><img border=0 src="slide0016_image030.gif"
+style='position:absolute;top:35.68%;left:24.1%;width:.66%;height:4.06%'><img
+border=0 src="slide0016_image031.gif" style='position:absolute;top:35.68%;
+left:40.92%;width:.52%;height:4.06%'><img border=0 src="slide0016_image032.gif"
+style='position:absolute;top:35.68%;left:57.61%;width:.52%;height:4.06%'><img
+border=0 src="slide0016_image033.gif" style='position:absolute;top:35.68%;
+left:74.3%;width:.52%;height:3.88%'>
+<div style='position:absolute;top:42.75%;left:5.69%;width:6.75%;height:12.72%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:8.33%;left:19.6%;width:70.58%;
+height:81.94%'>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:49.15%'><span
+style='font-family:Arial;font-size:200%;color:#FFFF99'><b>F1<br>
+</b></span></div>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:50.84%;left:0%;width:83.33%;height:49.15%'><span
+style='font-family:Arial;font-size:200%;color:#FFFF99;mso-special-format:lastCR;
+display:none'><b><br>
+</b></span></div>
+</div>
+</div>
+<img border=0 src="slide0016_image034.gif" style='position:absolute;top:39.92%;
+left:22.25%;width:4.23%;height:11.83%'><img border=0
+src="slide0016_image035.gif" style='position:absolute;top:39.92%;left:38.94%;
+width:4.23%;height:11.83%'><img border=0 src="slide0016_image036.gif"
+style='position:absolute;top:39.92%;left:55.62%;width:4.23%;height:11.83%'><img
+border=0 src="slide0016_image037.gif" style='position:absolute;top:39.39%;
+left:72.84%;width:4.23%;height:11.83%'><img border=0
+src="slide0016_image038.gif" style='position:absolute;top:43.46%;left:43.97%;
+width:11.12%;height:3.53%'><img border=0 src="slide0016_image039.gif"
+style='position:absolute;top:60.95%;left:20.66%;width:9.8%;height:3.53%'>
+<div style='position:absolute;top:71.73%;left:58.41%;width:20.52%;height:27.03%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:12.41%;left:6.45%;width:87.09%;
+height:82.35%'>
+<div style='text-align:center;mso-line-spacing:" 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17;position:absolute;top:0%;left:0%;width:100.0%;
+height:69.84%'><span style='position:absolute;top:0%;left:0%;width:99.25%'><span
+style='font-family:Arial;font-size:117%;color:#FFFF99'><b>20 generations </b></span></span><span
+style='position:absolute;top:39.77%;left:0%;width:100.0%'><span
+style='font-family:Arial;font-size:117%;color:#FFFF99'><b>brother-sister </b></span></span><span
+style='position:absolute;top:80.68%;left:0%;width:100.0%'><span
+style='font-family:Arial;font-size:117%;color:#FFFF99'><b>matings</b></span><span
+style='font-family:Arial;font-size:233%;color:#FFFF99;display:none'><b><br>
+</b></span></span></div>
+<div style='text-align:center;mso-line-spacing:" 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17;position:absolute;top:73.8%;left:0%;width:100.0%;
+height:26.98%'><span style='font-family:Arial;font-size:233%;color:#FFFF99;
+mso-special-format:lastCR;display:none'><b><br>
+</b></span></div>
+</div>
+</div>
+<img border=0 src="slide0016_image040.gif" style='position:absolute;top:60.95%;
+left:50.72%;width:9.93%;height:3.53%'><img border=0 src="slide0016_image041.gif"
+style='position:absolute;top:62.72%;left:54.03%;width:4.37%;height:28.97%'><img
+border=0 src="slide0016_image042.gif" style='position:absolute;top:61.13%;
+left:79.86%;width:10.86%;height:3.53%'><img border=0
+src="slide0016_image043.gif" style='position:absolute;top:62.36%;left:83.97%;
+width:4.1%;height:28.79%'>
+<div style='position:absolute;top:92.93%;left:21.72%;width:9.4%;height:10.07%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:8.77%;left:12.67%;width:84.5%;
+height:78.94%'>
+<div style='mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:48.88%'><span
+style='font-family:Arial;font-size:150%;color:#FFFF99'>BXD1</span><span
+style='font-family:Arial;font-size:150%;color:#484848;display:none'><br>
+</span></div>
+<div style='mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:51.11%;left:0%;width:83.33%;height:48.88%'><span
+style='font-family:Arial;font-size:150%;color:#484848;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</div>
+</div>
+<div style='position:absolute;top:92.75%;left:51.78%;width:9.4%;height:10.07%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:8.77%;left:12.67%;width:84.5%;
+height:78.94%'>
+<div style='mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:48.88%'><span
+style='font-family:Arial;font-size:150%;color:#FFFF99'>BXD2<br>
+</span></div>
+<div style='mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:51.11%;left:0%;width:83.33%;height:48.88%'><span
+style='font-family:Arial;font-size:150%;color:#FFFF99;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</div>
+</div>
+<div style='position:absolute;top:92.93%;left:80.79%;width:10.99%;height:6.0%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17;position:absolute;top:14.7%;left:12.04%;width:87.95%;
+height:64.7%'><span style='font-family:Arial;font-size:150%;color:#FFFF99'>BXD80</span></div>
+</div>
+<div style='position:absolute;top:90.45%;left:64.1%;width:17.74%;height:17.84%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:5.94%;left:7.46%;width:92.53%;
+height:87.12%'>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:48.86%'><span
+style='font-family:Arial;font-size:300%;color:#FFFF99'>+ � +<br>
+</span></div>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:50.0%;left:0%;width:83.87%;height:48.86%'><span
+style='font-family:Arial;font-size:300%;color:#FFFF99;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</div>
+</div>
+<div style='position:absolute;top:62.89%;left:4.9%;width:6.75%;height:12.72%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:6.94%;left:19.6%;width:70.58%;
+height:81.94%'>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:49.15%'><span
+style='font-family:Arial;font-size:200%;color:#FFFF99'><b>F2<br>
+</b></span></div>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:50.84%;left:0%;width:83.33%;height:49.15%'><span
+style='font-family:Arial;font-size:200%;color:#FFFF99;mso-special-format:lastCR;
+display:none'><b><br>
+</b></span></div>
+</div>
+</div>
+<img border=0 src="slide0016_image044.gif" style='position:absolute;top:54.24%;
+left:18.01%;width:75.62%;height:1.06%'><img border=0
+src="slide0016_image045.gif" style='position:absolute;top:54.06%;left:17.88%;
+width:.66%;height:3.88%'><img border=0 src="slide0016_image046.gif"
+style='position:absolute;top:54.24%;left:32.45%;width:.52%;height:3.88%'><img
+border=0 src="slide0016_image047.gif" style='position:absolute;top:54.24%;
+left:48.07%;width:.52%;height:4.06%'><img border=0 src="slide0016_image048.gif"
+style='position:absolute;top:54.24%;left:62.78%;width:.52%;height:4.06%'><img
+border=0 src="slide0016_image049.gif" style='position:absolute;top:54.24%;
+left:77.74%;width:.52%;height:4.06%'><img border=0 src="slide0016_image050.gif"
+style='position:absolute;top:54.59%;left:92.71%;width:.52%;height:3.71%'><img
+border=0 src="slide0016_image051.gif" style='position:absolute;top:44.87%;
+left:49.13%;width:.79%;height:10.07%'><img border=0 src="slide0016_image052.gif"
+style='position:absolute;top:57.59%;left:15.89%;width:4.23%;height:11.83%'><img
+border=0 src="slide0016_image053.gif" style='position:absolute;top:57.59%;
+left:30.86%;width:4.37%;height:11.83%'><img border=0
+src="slide0016_image054.gif" style='position:absolute;top:57.59%;left:46.35%;
+width:4.23%;height:11.83%'><img border=0 src="slide0016_image055.gif"
+style='position:absolute;top:57.59%;left:60.92%;width:4.23%;height:11.83%'><img
+border=0 src="slide0016_image056.gif" style='position:absolute;top:57.59%;
+left:75.62%;width:4.23%;height:11.83%'><img border=0
+src="slide0016_image057.gif" style='position:absolute;top:57.59%;left:90.86%;
+width:4.23%;height:11.83%'><img border=0 src="slide0016_image058.gif"
+style='position:absolute;top:84.09%;left:56.42%;width:1.98%;height:1.41%'><img
+border=0 src="slide0016_image059.gif" style='position:absolute;top:80.21%;
+left:25.96%;width:1.98%;height:11.83%'><img border=0
+src="slide0016_image060.gif" style='position:absolute;top:84.98%;left:86.09%;
+width:1.85%;height:2.12%'>
+<div style='position:absolute;top:75.61%;left:1.58%;width:14.17%;height:14.13%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:7.5%;left:.93%;width:97.19%;
+height:83.75%'>
+<div style='text-align:center;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:0%;left:7.69%;width:83.65%;
+height:32.83%'><span style='font-family:Arial;font-size:150%;color:#FFFF99'><b>BXD
+RI<br>
+</b></span></div>
+<div style='text-align:center;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:32.83%;left:0%;width:100.0%;
+height:32.83%'><span style='font-family:Arial;font-size:150%;color:#FFFF99'><b>Strain
+set<br>
+</b></span></div>
+<div style='text-align:center;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:67.16%;left:7.69%;width:83.65%;
+height:32.83%'><span style='font-family:Arial;font-size:150%;color:#FFFF99;
+mso-special-format:lastCR;display:none'><b><br>
+</b></span></div>
+</div>
+</div>
+<img border=0 src="slide0016_image061.gif" style='position:absolute;top:12.36%;
+left:14.17%;width:10.59%;height:6.36%'><img border=0
+src="slide0016_image062.gif" style='position:absolute;top:10.6%;left:76.42%;
+width:14.3%;height:8.3%'>
+<div style='position:absolute;top:20.84%;left:17.48%;width:9.8%;height:14.13%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:7.5%;left:6.75%;width:86.48%;
+height:83.75%'>
+<div style='text-align:center;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:0%;left:7.81%;width:82.81%;
+height:32.83%'><span style='font-family:Arial;font-size:150%;color:#FFFF99'>fully<br>
+</span></div>
+<div style='text-align:center;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:32.83%;left:0%;width:100.0%;
+height:32.83%'><span style='font-family:Arial;font-size:150%;color:#FFFF99'>inbred<br>
+</span></div>
+<div style='text-align:center;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:67.16%;left:7.81%;width:82.81%;
+height:32.83%'><span style='font-family:Arial;font-size:150%;color:#FFFF99;
+mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<div style='position:absolute;top:38.16%;left:2.91%;width:12.05%;height:10.07%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:8.77%;left:3.29%;width:92.3%;
+height:78.94%'>
+<div style='text-align:center;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:0%;left:0%;width:100.0%;
+height:48.88%'><span style='font-family:Arial;font-size:150%;color:#FFFF99'>isogenic<br>
+</span></div>
+<div style='text-align:center;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:51.11%;left:8.33%;width:83.33%;
+height:48.88%'><span style='font-family:Arial;font-size:150%;color:#FFFF99;
+mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<div style='position:absolute;top:54.41%;left:1.85%;width:12.45%;height:14.13%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:7.5%;left:2.12%;width:93.61%;
+height:83.75%'>
+<div style='text-align:center;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:0%;left:7.95%;width:82.95%;
+height:32.83%'><span style='font-family:Arial;font-size:150%;color:#FFFF99'>hetero-<br>
+</span></div>
+<div style='text-align:center;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:32.83%;left:0%;width:100.0%;
+height:32.83%'><span style='font-family:Arial;font-size:150%;color:#FFFF99'>geneous<br>
+</span></div>
+<div style='text-align:center;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:67.16%;left:7.95%;width:82.95%;
+height:32.83%'><span style='font-family:Arial;font-size:150%;color:#FFFF99;
+mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<div style='position:absolute;top:74.91%;left:29.0%;width:22.25%;height:22.08%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:4.0%;left:5.35%;width:88.09%;
+height:90.4%'>
+<div style='text-align:center;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:0%;left:0%;width:100.0%;
+height:79.64%'><span style='position:absolute;top:0%;left:.67%;width:99.32%'><span
+style='font-family:Arial;font-size:150%;color:#FFFF99'>Recombined </span></span><span
+style='position:absolute;top:25.55%;left:.67%;width:99.32%'><span
+style='font-family:Arial;font-size:150%;color:#FFFF99'>chromosomes </span></span><span
+style='position:absolute;top:51.11%;left:0%;width:100.0%'><span
+style='font-family:Arial;font-size:150%;color:#FFFF99'>are needed for </span></span><span
+style='position:absolute;top:75.55%;left:.67%;width:99.32%'><span
+style='font-family:Arial;font-size:150%;color:#FFFF99'>mapping<br>
+</span></span></div>
+<div style='text-align:center;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:80.53%;left:.67%;width:99.32%;
+height:19.46%'><span style='font-family:Arial;font-size:150%;color:#FFFF99;
+mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<div style='position:absolute;top:10.24%;left:25.56%;width:10.46%;height:10.07%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:8.77%;left:12.65%;width:87.34%;
+height:78.94%'>
+<div style='mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:48.88%'><span
+style='font-family:Arial;font-size:150%;color:#FFFF99'>female<br>
+</span></div>
+<div style='mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:51.11%;left:0%;width:84.05%;height:48.88%'><span
+style='font-family:Arial;font-size:150%;color:#FFFF99;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</div>
+</div>
+<div style='position:absolute;top:10.24%;left:64.5%;width:8.21%;height:10.07%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:8.77%;left:14.51%;width:80.64%;
+height:78.94%'>
+<div style='mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:48.88%'><span
+style='font-family:Arial;font-size:150%;color:#FFFF99'>male<br>
+</span></div>
+<div style='mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:51.11%;left:0%;width:84.0%;height:48.88%'><span
+style='font-family:Arial;font-size:150%;color:#FFFF99;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</div>
+</div>
+<div style='position:absolute;top:30.56%;left:78.01%;width:19.47%;height:10.07%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:15.78%;left:6.12%;width:93.19%;
+height:71.92%'>
+<div style='mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:41.46%'><span
+style='font-family:Arial;font-size:117%;color:#FFFF99'>chromosome pair</span><span
+style='font-family:Arial;font-size:150%;color:#FFFF99;display:none'><br>
+</span></div>
+<div style='mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:46.34%;left:0%;width:83.21%;height:53.65%'><span
+style='font-family:Arial;font-size:150%;color:#FFFF99;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</div>
+</div>
+<img border=0 src="slide0016_image063.gif" style='position:absolute;top:31.09%;
+left:65.82%;width:12.84%;height:2.82%'>
+<div style='position:absolute;top:86.21%;left:3.97%;width:10.06%;height:14.48%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:4.87%;left:5.26%;width:86.84%;
+height:85.36%'>
+<div style='text-align:center;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:0%;left:9.09%;width:83.33%;
+height:24.28%'><span style='font-family:Arial;font-size:117%;color:#E9EB5D'>Inbred<br>
+</span></div>
+<div style='text-align:center;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:25.71%;left:0%;width:100.0%;
+height:24.28%'><span style='font-family:Arial;font-size:117%;color:#E9EB5D'>Isogenic<br>
+</span></div>
+<div style='text-align:center;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:50.0%;left:6.06%;width:90.9%;
+height:24.28%'><span style='font-family:Arial;font-size:117%;color:#E9EB5D'>siblings</span><span
+style='font-family:Arial;font-size:117%;color:aqua;display:none'><br>
+</span></div>
+<div style='text-align:center;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:75.71%;left:9.09%;width:83.33%;
+height:24.28%'><span style='font-family:Arial;font-size:117%;color:aqua;
+mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<img border=0 src="slide0016_image064.gif" style='position:absolute;top:79.32%;
+left:83.7%;width:1.98%;height:11.83%'><img border=0 src="slide0016_image065.gif"
+style='position:absolute;top:79.85%;left:53.5%;width:1.98%;height:11.83%'><img
+border=0 src="slide0016_image066.gif" style='position:absolute;top:80.21%;
+left:23.44%;width:1.98%;height:11.83%'>
+<div style='position:absolute;top:18.72%;left:43.04%;width:13.77%;height:9.89%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:10.71%;left:9.61%;width:90.38%;height:76.78%'><span
+style='font-family:Arial;font-size:300%;color:aqua'>B</span><span
+style='font-family:Arial;font-size:300%;color:#FFFF99'>X</span><span
+style='font-family:Arial;font-size:300%;color:#FF1911'>D</span></div>
+</div>
+<img border=0 src="slide0016_image067.gif" style='position:absolute;top:27.2%;
+left:32.98%;width:31.39%;height:4.06%'><img border=0
+src="slide0016_image068.gif" style='position:absolute;top:66.25%;left:60.92%;
+width:1.98%;height:3.18%'><img border=0 src="slide0016_image069.gif"
+style='position:absolute;top:64.31%;left:15.89%;width:1.98%;height:5.3%'><img
+border=0 src="slide0016_image070.gif" style='position:absolute;top:57.59%;
+left:75.62%;width:1.98%;height:5.65%'><img border=0 src="slide0016_image071.gif"
+style='position:absolute;top:28.44%;left:48.87%;width:.92%;height:8.12%'><img
+border=0 src="slide0016_image072.gif" style='position:absolute;top:62.19%;
+left:23.84%;width:3.57%;height:16.96%'><img border=0
+src="slide0016_image073.gif" style='position:absolute;top:61.48%;left:63.17%;
+width:1.98%;height:8.12%'></div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>The next set of slides
+  provide a very short interlude on QTL mapping. You will need to do some
+  independent reading on this topic if this is your first exposure to QTL
+  mapping. The recombinant inbred strains that we are using in WebQTL and in
+  this particular demo were generated about 25 years ago by Dr. Ben Taylor at
+  The Jackson Laboratory. He crossed a female C57BL/6J mouse with a male DBA/2J
+  mice. At the bottom of this slide we have schematized one chromosome pair
+  from three out of 80 BXD RI strains.<span style="mso-spacerun: yes">&nbsp;
+  </span>The dashed vertical lines that lead to the final BXD RI lines involve
+  20 full sib matings (about 6 years of breeding). Some lines die<span
+  style="mso-spacerun: yes">&nbsp; </span>out during inbreeding. For example,
+  there is no extant BXD3 or BXD4 strain.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
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diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image026.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image026.gif
new file mode 100755
index 00000000..dbd66f42
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diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image027.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image027.gif
new file mode 100755
index 00000000..dbd66f42
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diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image028.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image028.gif
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index 00000000..154d7365
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diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image029.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image029.gif
new file mode 100755
index 00000000..1abab915
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diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image030.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image030.gif
new file mode 100755
index 00000000..69ef631f
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+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image030.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image031.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image031.gif
new file mode 100755
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diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image032.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image032.gif
new file mode 100755
index 00000000..5667a634
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image032.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image033.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image033.gif
new file mode 100755
index 00000000..0242d92d
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image033.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image034.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image034.gif
new file mode 100755
index 00000000..727cf43d
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image034.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image035.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image035.gif
new file mode 100755
index 00000000..0e054c6a
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image035.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image036.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image036.gif
new file mode 100755
index 00000000..ce6267c4
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image036.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image037.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image037.gif
new file mode 100755
index 00000000..ce6267c4
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image037.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image038.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image038.gif
new file mode 100755
index 00000000..0cb22f12
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image038.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image039.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image039.gif
new file mode 100755
index 00000000..e1e73ea8
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image039.gif
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new file mode 100755
index 00000000..80aa23a2
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image040.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image041.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image041.gif
new file mode 100755
index 00000000..579948d1
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image041.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image042.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image042.gif
new file mode 100755
index 00000000..c3c1b86a
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image042.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image043.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image043.gif
new file mode 100755
index 00000000..9c71a728
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image043.gif
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new file mode 100755
index 00000000..ece5bd04
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+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image044.gif
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new file mode 100755
index 00000000..eefabc07
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+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image045.gif
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new file mode 100755
index 00000000..c44101f3
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image046.gif
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new file mode 100755
index 00000000..82bf8400
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image047.gif
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new file mode 100755
index 00000000..82bf8400
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image048.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image049.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image049.gif
new file mode 100755
index 00000000..82bf8400
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image049.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image050.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image050.gif
new file mode 100755
index 00000000..eba3527e
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image050.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image051.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image051.gif
new file mode 100755
index 00000000..03773263
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image051.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image052.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image052.gif
new file mode 100755
index 00000000..c6935ae7
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image052.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image053.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image053.gif
new file mode 100755
index 00000000..cd1d539a
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image053.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image054.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image054.gif
new file mode 100755
index 00000000..c8ef7066
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image054.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image055.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image055.gif
new file mode 100755
index 00000000..07bc4f47
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image055.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image056.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image056.gif
new file mode 100755
index 00000000..2265b87e
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image056.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image057.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image057.gif
new file mode 100755
index 00000000..9edbea2f
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image057.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image058.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image058.gif
new file mode 100755
index 00000000..d9a062bd
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image058.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image059.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image059.gif
new file mode 100755
index 00000000..4cc4734c
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image059.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image060.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image060.gif
new file mode 100755
index 00000000..9fed61f5
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image060.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image061.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image061.gif
new file mode 100755
index 00000000..07e65c79
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image061.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image062.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image062.gif
new file mode 100755
index 00000000..c2d2becd
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image062.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image063.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image063.gif
new file mode 100755
index 00000000..502483b8
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image063.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image064.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image064.gif
new file mode 100755
index 00000000..c908a01e
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image064.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image065.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image065.gif
new file mode 100755
index 00000000..9227fc62
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image065.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image066.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image066.gif
new file mode 100755
index 00000000..71f687a1
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image066.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image067.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image067.gif
new file mode 100755
index 00000000..e4688802
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image067.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image068.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image068.gif
new file mode 100755
index 00000000..306836e4
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image068.gif
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new file mode 100755
index 00000000..46df1298
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image069.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_image070.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image070.gif
new file mode 100755
index 00000000..4710f71e
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image070.gif
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new file mode 100755
index 00000000..b54c0019
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+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image071.gif
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new file mode 100755
index 00000000..1ee0cc1b
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new file mode 100755
index 00000000..af14bc62
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+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_image073.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0016_notes_pane.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0016_notes_pane.htm
new file mode 100755
index 00000000..2ab19f7b
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0016_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>The next set of slides
+  provide a very short interlude on QTL mapping. You will need to do some
+  independent reading on this topic if this is your first exposure to QTL
+  mapping. The recombinant inbred strains that we are using in WebQTL and in
+  this particular demo were generated about 25 years ago by Dr. Ben Taylor at
+  The Jackson Laboratory. He crossed a female C57BL/6J mouse with a male DBA/2J
+  mice. At the bottom of this slide we have schematized one chromosome pair
+  from three out of 80 BXD RI strains.<span style="mso-spacerun: yes">&nbsp;
+  </span>The dashed vertical lines that lead to the final BXD RI lines involve
+  20 full sib matings (about 6 years of breeding). Some lines die<span
+  style="mso-spacerun: yes">&nbsp; </span>out during inbreeding. For example,
+  there is no extant BXD3 or BXD4 strain.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0017.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0017.htm
new file mode 100755
index 00000000..1b5ac952
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0017.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jun-19-03>
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0017.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.gif" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'><img
+border=0 src="slide0017_image074.gif" style='position:absolute;top:40.45%;
+left:73.24%;width:14.56%;height:5.3%'>
+<div class=O style='position:absolute;top:40.81%;left:74.56%;width:11.92%;
+height:7.24%'>
+<div style='mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:60.97%'><span
+style='font-family:Gadget;font-size:150%;color:white'>aa<br>
+</span></div>
+<div style='mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:41.46%;left:0%;width:100.0%;height:60.97%'><span
+style='font-family:Gadget;font-size:150%;color:white;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</div>
+<img border=0 src="slide0017_image075.gif" style='position:absolute;top:16.6%;
+left:73.24%;width:14.56%;height:5.3%'>
+<div class=O style='position:absolute;top:16.96%;left:74.56%;width:11.92%;
+height:7.24%'>
+<div style='mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:60.97%'><span
+style='font-family:Gadget;font-size:150%;color:white'>aaaa<br>
+</span></div>
+<div style='mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:41.46%;left:0%;width:100.0%;height:60.97%'><span
+style='font-family:Gadget;font-size:150%;color:white;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</div>
+<div style='position:absolute;top:20.31%;left:71.65%;width:25.96%;height:19.78%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:9.82%;left:5.1%;width:95.4%;
+height:83.03%'>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16;position:absolute;top:0%;left:0%;width:100.0%;height:45.16%'><span
+style='font-size:267%;color:#E2EBF0'>D2 strain</span><span style='font-family:
+Palatino;font-size:333%;color:#FBFDB8;display:none'><br>
+</span></div>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16;position:absolute;top:49.46%;left:0%;width:88.77%;height:50.53%'><span
+style='font-family:Palatino;font-size:333%;color:#FBFDB8;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<div style='position:absolute;top:43.81%;left:71.65%;width:25.56%;height:19.78%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:10.71%;left:5.18%;width:94.81%;
+height:83.03%'>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16;position:absolute;top:0%;left:0%;width:100.0%;height:45.16%'><span
+style='font-size:267%;color:#F6BF69'>B6 strain</span><span style='font-family:
+Palatino;font-size:333%;color:#F6BF69;display:none'><br>
+</span></div>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16;position:absolute;top:48.38%;left:0%;width:87.43%;height:50.53%'><span
+style='font-family:Palatino;font-size:333%;color:#F6BF69;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<img border=0 src="slide0017_image076.gif" style='position:absolute;top:17.31%;
+left:31.25%;width:1.32%;height:42.22%'><img border=0
+src="slide0017_image077.gif" style='position:absolute;top:40.63%;left:31.39%;
+width:39.86%;height:3.53%'>
+<div style='position:absolute;top:17.13%;left:40.0%;width:30.59%;height:31.44%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:11.23%;left:4.32%;width:90.9%;
+height:83.7%'>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16;position:absolute;top:0%;left:0%;width:100.0%;height:61.74%'><span
+style='position:absolute;top:0%;left:0%;width:100.0%'><span style='font-size:
+233%;color:#E9EB5D'><i>amount of </i></span></span><span style='position:absolute;
+top:59.78%;left:0%;width:100.0%'><span style='font-size:233%;color:#E9EB5D'><i>transcript</i></span><span
+style='font-family:Palatino;font-size:367%;color:#E9EB5D;display:none'><br>
+</span></span></div>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16;position:absolute;top:65.77%;left:0%;width:100.0%;height:34.89%'><span
+style='font-family:Palatino;font-size:367%;color:#E9EB5D;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<div style='position:absolute;top:6.0%;left:72.45%;width:21.32%;height:19.78%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:9.82%;left:6.21%;width:87.57%;
+height:83.03%'>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16;position:absolute;top:0%;left:0%;width:100.0%;height:45.16%'><span
+style='font-size:267%;color:white'>4 </span><span style='font-size:233%;
+color:white'>units</span><span style='font-family:Palatino;font-size:333%;
+color:#E9EB5D;display:none'><br>
+</span></div>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16;position:absolute;top:49.46%;left:0%;width:100.0%;height:50.53%'><span
+style='font-family:Palatino;font-size:333%;color:#E9EB5D;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<div style='position:absolute;top:29.5%;left:72.45%;width:21.32%;height:19.78%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:10.71%;left:6.21%;width:87.57%;
+height:83.03%'>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16;position:absolute;top:0%;left:0%;width:100.0%;height:45.16%'><span
+style='font-size:267%;color:white'>2</span><span style='font-size:233%;
+color:white'> units</span><span style='font-family:Palatino;font-size:333%;
+color:#E9EB5D;display:none'><br>
+</span></div>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16;position:absolute;top:48.38%;left:0%;width:100.0%;height:50.53%'><span
+style='font-family:Palatino;font-size:333%;color:#E9EB5D;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<img border=0 src="slide0017_image078.gif" style='position:absolute;top:15.72%;
+left:31.25%;width:40.26%;height:5.47%'>
+<div class=O style='position:absolute;top:17.84%;left:9.93%;width:4.76%;
+height:16.43%'>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:50.53%'><span
+style='font-size:300%;color:#E2EBF0'>D<br>
+</span></div>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:49.46%;left:0%;width:83.33%;height:50.53%'><span
+style='font-size:300%;color:#E2EBF0;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+<div class=O style='position:absolute;top:17.84%;left:17.88%;width:4.23%;
+height:16.43%'>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:50.53%'><span
+style='font-size:300%;color:#F6BF69'>B<br>
+</span></div>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:49.46%;left:0%;width:84.37%;height:50.53%'><span
+style='font-size:300%;color:#F6BF69;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+<div style='position:absolute;top:77.73%;left:5.43%;width:104.37%;height:26.32%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=O style='position:absolute;top:8.72%;left:1.26%;width:98.73%;
+height:87.24%'>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:62.3%'><span
+style='position:absolute;top:0%;left:0%;width:100.0%'><span style='font-size:
+233%;color:#E2EBF0'>D</span><span style='font-size:233%;color:#E9EB5D'> </span><span
+style='font-size:200%;color:#E9EB5D'>and </span><span style='font-size:233%;
+color:#F6BF69'>B</span><span style='font-size:233%;color:#E9EB5D'> </span><span
+style='font-size:200%;color:#E9EB5D'>may be SNP-like variants in the promoter </span></span><span
+style='position:absolute;top:61.72%;left:0%;width:97.55%'><span
+style='font-size:200%;color:#E9EB5D'>itself (cis QTL) or in </span><span
+style='font-size:200%;color:#EAEC5E'>upstream genes (trans QTLs)</span><span
+style='font-size:300%;color:#E9EB5D;display:none'><br>
+</span></span></div>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:63.84%;left:0%;width:86.88%;height:36.15%'><span
+style='font-size:300%;color:#E9EB5D;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<div class=O style='position:absolute;top:7.59%;left:4.23%;width:22.78%;
+height:16.25%'>
+<div style='text-align:center;mso-line-spacing:" 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17;position:absolute;top:0%;left:1.74%;width:97.09%;
+height:33.69%'><span style='font-size:200%;color:#E9EB5D'>UPSTREAM<br>
+</span></div>
+<div style='text-align:center;mso-line-spacing:" 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17;position:absolute;top:32.6%;left:0%;width:100.0%;
+height:33.69%'><span style='font-size:200%;color:#E9EB5D'>modulators<br>
+</span></div>
+<div style='text-align:center;mso-line-spacing:" 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17;position:absolute;top:66.3%;left:4.65%;width:90.69%;
+height:33.69%'><span style='font-size:200%;color:#E9EB5D;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</div>
+<div style='position:absolute;top:7.59%;left:44.5%;width:17.21%;height:18.19%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:3.88%;left:6.92%;width:83.84%;
+height:90.29%'>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16;position:absolute;top:0%;left:0%;width:100.0%;height:50.53%'><span
+style='font-size:300%;color:#E2EBF0'>High<br>
+</span></div>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16;position:absolute;top:49.46%;left:0%;width:100.0%;height:50.53%'><span
+style='font-size:300%;color:#E2EBF0;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<div style='position:absolute;top:63.78%;left:8.74%;width:6.62%;height:18.19%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=O style='position:absolute;top:3.88%;left:20.0%;width:72.0%;
+height:90.29%'>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:50.53%'><span
+style='font-size:300%;color:#E2EBF0'>D<br>
+</span></div>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:49.46%;left:0%;width:83.33%;height:50.53%'><span
+style='font-size:300%;color:#E2EBF0;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<div style='position:absolute;top:63.78%;left:15.09%;width:6.22%;height:18.19%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=O style='position:absolute;top:3.88%;left:19.14%;width:68.08%;
+height:90.29%'>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:50.53%'><span
+style='font-size:300%;color:#F6BF69'>B<br>
+</span></div>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:49.46%;left:0%;width:84.37%;height:50.53%'><span
+style='font-size:300%;color:#F6BF69;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<div style='position:absolute;top:71.02%;left:7.54%;width:16.02%;height:12.72%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=O style='position:absolute;top:5.55%;left:7.43%;width:91.73%;
+height:86.11%'>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:50.0%'><span
+style='font-size:200%;color:#E9EB5D'><i>cis QTL</i></span><span
+style='font-size:200%;color:#E9EB5D;display:none'><br>
+</span></div>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:48.38%;left:0%;width:82.88%;height:50.0%'><span
+style='font-size:200%;color:#E9EB5D;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<img border=0 src="slide0017_image079.gif" style='position:absolute;top:57.24%;
+left:-1.05%;width:101.98%;height:7.59%'>
+<div class=O style='position:absolute;top:44.16%;left:47.15%;width:9.4%;
+height:12.72%'>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:51.38%'><span
+style='font-size:233%;color:#F6BF69'>Low<br>
+</span></div>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:50.0%;left:0%;width:83.09%;height:51.38%'><span
+style='font-size:233%;color:#F6BF69;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+<div style='position:absolute;top:58.12%;left:.79%;width:114.56%;height:6.53%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=O style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:10.81%;left:1.15%;width:98.84%;height:72.97%'><span
+style='font-family:Gadget;font-size:167%;color:white'>&gt;&gt;&gt;&gt;PROMOTER--ATG-Exon1-Intron1-Exon2-Intron2
+- etc-3'UTR &gt;&gt;&gt;&gt;&gt;</span></div>
+</div>
+<img border=0 src="slide0017_image080.gif" style='position:absolute;top:37.98%;
+left:8.6%;width:13.77%;height:20.67%'>
+<div class=O style='position:absolute;top:39.75%;left:10.06%;width:3.57%;
+height:12.01%'>
+<div style='text-align:center;mso-line-spacing:" 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17;position:absolute;top:0%;left:0%;width:100.0%;
+height:48.52%'><span style='font-family:Palatino;font-size:233%;color:white'><b>&#4;<br>
+</b></span></div>
+<div style='text-align:center;mso-line-spacing:" 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17;position:absolute;top:52.94%;left:7.4%;width:85.18%;
+height:48.52%'><span style='font-family:Palatino;font-size:233%;color:white;
+mso-special-format:lastCR;display:none'><b><br>
+</b></span></div>
+</div>
+<div class=O style='position:absolute;top:40.1%;left:17.48%;width:3.57%;
+height:12.01%'>
+<div style='text-align:center;mso-line-spacing:" 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17;position:absolute;top:0%;left:0%;width:100.0%;
+height:48.52%'><span style='font-family:Palatino;font-size:233%;color:white'><b>&#4;<br>
+</b></span></div>
+<div style='text-align:center;mso-line-spacing:" 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17;position:absolute;top:51.47%;left:7.4%;width:85.18%;
+height:48.52%'><span style='font-family:Palatino;font-size:233%;color:white;
+mso-special-format:lastCR;display:none'><b><br>
+</b></span></div>
+</div>
+<img border=0 src="slide0017_image081.gif" style='position:absolute;top:33.74%;
+left:8.6%;width:13.77%;height:20.67%'>
+<div class=O style='position:absolute;top:35.86%;left:17.48%;width:3.57%;
+height:12.01%'>
+<div style='text-align:center;mso-line-spacing:" 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17;position:absolute;top:0%;left:0%;width:100.0%;
+height:48.52%'><span style='font-family:Palatino;font-size:233%;color:white'><b>&#4;<br>
+</b></span></div>
+<div style='text-align:center;mso-line-spacing:" 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17;position:absolute;top:51.47%;left:7.4%;width:85.18%;
+height:48.52%'><span style='font-family:Palatino;font-size:233%;color:white;
+mso-special-format:lastCR;display:none'><b><br>
+</b></span></div>
+</div>
+<div class=O style='position:absolute;top:35.51%;left:10.06%;width:3.57%;
+height:12.01%'>
+<div style='text-align:center;mso-line-spacing:" 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17;position:absolute;top:0%;left:0%;width:100.0%;
+height:48.52%'><span style='font-family:Palatino;font-size:233%;color:white'><b>&#4;<br>
+</b></span></div>
+<div style='text-align:center;mso-line-spacing:" 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17;position:absolute;top:51.47%;left:7.4%;width:85.18%;
+height:48.52%'><span style='font-family:Palatino;font-size:233%;color:white;
+mso-special-format:lastCR;display:none'><b><br>
+</b></span></div>
+</div>
+<div class=O style='position:absolute;top:37.8%;left:20.66%;width:.13%;
+height:12.01%'>
+<div style='text-align:center;mso-line-spacing:" 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17;position:absolute;top:0%;left:0%;width:100.0%;
+height:48.52%'><span style='font-family:Palatino;font-size:233%;color:white;
+display:none'><b><br>
+</b></span></div>
+<div style='text-align:center;mso-line-spacing:" 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17;position:absolute;top:51.47%;left:0%;width:100.0%;
+height:48.52%'><span style='font-family:Palatino;font-size:233%;color:white;
+mso-special-format:lastCR;display:none'><b><br>
+</b></span></div>
+</div>
+<img border=0 src="slide0017_image082.gif" style='position:absolute;top:27.38%;
+left:4.9%;width:21.45%;height:21.37%'>
+<div style='position:absolute;top:27.38%;left:5.03%;width:21.05%;height:12.72%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=O style='position:absolute;top:5.55%;left:6.28%;width:93.71%;
+height:86.11%'>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:50.0%'><span
+style='font-size:200%;color:#E9EB5D'><i>trans QTL</i></span><span
+style='font-size:200%;color:#E9EB5D;display:none'><br>
+</span></div>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:48.38%;left:0%;width:83.22%;height:50.0%'><span
+style='font-size:200%;color:#E9EB5D;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+</div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>This slide is
+  illustrates two categories of QTLs that modulate variability in transcript
+  abundance.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>1. cis QTLs are defined
+  as QTLs that are closely linked to the gene whose transcript is the measured
+  trait. For example, a polymorphism in the promoter that affects the binding
+  of a transcription factor. However, cis QTLs can be far upstream or downstream
+  polymorphisms in enhancers. They may also be polymorphisms in neigghboring
+  genes.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>2. trans QTLs map far
+  enough away from the location of the gene that gives rise to the transcript
+  that is being measured so that we can be quite certain that the QTL is not IN
+  the gene itself. The most blatant type of trans-QTL would be a polymorphism
+  in a transcription factor. BUT in the majority of cases, the trans QTLs can
+  be far removed in a mechanistic sense from the actual events modulating
+  transcript abundance. That is why there are three overlappoing arrows above.<span
+  style="mso-spacerun: yes">&nbsp; </span>The way in which an upstream
+  polymorphism influences a downstream difference in mRNA abundance can be very
+  indirect. Effects can :</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3><span
+  style="mso-spacerun: yes">&nbsp;&nbsp; </span>a.<span style="mso-spacerun:
+  yes">&nbsp; </span>cross tissue types (a polymorphic liver enzyme may affect
+  CNS gene expression)</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3><span
+  style="mso-spacerun: yes">&nbsp;&nbsp; </span>b.<span style="mso-spacerun:
+  yes">&nbsp; </span>cross time (the modulator is only expressed for one day
+  during development but has permanent effects in adults),</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3><span
+  style="mso-spacerun: yes">&nbsp;&nbsp; </span>c.<span style="mso-spacerun:
+  yes">&nbsp; </span>may be contingent on environmental factors (heat shock may
+  trigger the expression of a polymorphic factor that affects mRNA abundance).</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
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new file mode 100755
index 00000000..a11a8b2a
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0017_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>This slide is
+  illustrates two categories of QTLs that modulate variability in transcript
+  abundance.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>1. cis QTLs are defined
+  as QTLs that are closely linked to the gene whose transcript is the measured
+  trait. For example, a polymorphism in the promoter that affects the binding
+  of a transcription factor. However, cis QTLs can be far upstream or downstream
+  polymorphisms in enhancers. They may also be polymorphisms in neigghboring
+  genes.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>2. trans QTLs map far
+  enough away from the location of the gene that gives rise to the transcript
+  that is being measured so that we can be quite certain that the QTL is not IN
+  the gene itself. The most blatant type of trans-QTL would be a polymorphism
+  in a transcription factor. BUT in the majority of cases, the trans QTLs can
+  be far removed in a mechanistic sense from the actual events modulating
+  transcript abundance. That is why there are three overlappoing arrows above.<span
+  style="mso-spacerun: yes">&nbsp; </span>The way in which an upstream
+  polymorphism influences a downstream difference in mRNA abundance can be very
+  indirect. Effects can :</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2><span
+  style="mso-spacerun: yes">&nbsp;&nbsp; </span>a.<span style="mso-spacerun:
+  yes">&nbsp; </span>cross tissue types (a polymorphic liver enzyme may affect
+  CNS gene expression)</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2><span
+  style="mso-spacerun: yes">&nbsp;&nbsp; </span>b.<span style="mso-spacerun:
+  yes">&nbsp; </span>cross time (the modulator is only expressed for one day
+  during development but has permanent effects in adults),</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2><span
+  style="mso-spacerun: yes">&nbsp;&nbsp; </span>c.<span style="mso-spacerun:
+  yes">&nbsp; </span>may be contingent on environmental factors (heat shock may
+  trigger the expression of a polymorphic factor that affects mRNA abundance).</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
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+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content="Jun-19-03: WebQTL to exploring upstream control">
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
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+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0018.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
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+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.gif" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:2.29%;left:4.1%;width:105.16%;height:9.01%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='mso-line-spacing:" 0 &#1;";position:absolute;top:11.76%;
+left:1.25%;width:98.86%;height:82.35%'><span style='font-family:Verdana;
+font-size:73%'><i>WebQTL to exploring upstream control</i></span></div>
+</div>
+<img border=0 src="slide0018_image083.gif" style='position:absolute;top:13.07%;
+left:5.16%;width:89.66%;height:62.19%'><img border=0
+src="slide0018_image084.gif" style='position:absolute;top:19.25%;left:55.49%;
+width:19.2%;height:25.97%'>
+<div class=O style='position:absolute;top:16.43%;left:74.3%;width:15.49%;
+height:5.65%'><span style='font-family:"Gill Sans";font-size:217%;color:#FF0F0F'>Just
+click</span></div>
+</div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>Back to the demo. Please
+  bring the Traiit Data and Editing window to the front and look for the
+  Interval Mapping button. Please confirm that you are back to the trait
+  amyloid beta precursor protein.<span style="mso-spacerun: yes">&nbsp;
+  </span>If so, then just click the button.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>Notice that the default
+  for:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>Select Chrs (chromosomes)
+  is ALL</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>Select Probes is Probe Set</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>Options: Permuation test
+  YES<span style="mso-spacerun: yes">&nbsp; </span>(1000 is the default number)</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>Options: Bootstrap test
+  YES (1000 is the default number)</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0018_image083.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0018_image083.gif
new file mode 100755
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+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0018_image083.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0018_image084.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0018_image084.gif
new file mode 100755
index 00000000..32b75679
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0018_image084.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0018_notes_pane.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0018_notes_pane.htm
new file mode 100755
index 00000000..50a3e6c2
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0018_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Back to the demo. Please
+  bring the Traiit Data and Editing window to the front and look for the
+  Interval Mapping button. Please confirm that you are back to the trait
+  amyloid beta precursor protein.<span style="mso-spacerun: yes">&nbsp;
+  </span>If so, then just click the button.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Notice that the default
+  for:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Select Chrs (chromosomes)
+  is ALL</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Select Probes is Probe Set</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Options: Permuation test
+  YES<span style="mso-spacerun: yes">&nbsp; </span>(1000 is the default number)</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Options: Bootstrap test
+  YES (1000 is the default number)</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0019.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0019.htm
new file mode 100755
index 00000000..9040b37a
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0019.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Jun-19-03: WebQTL to exploring upstream control.">
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0019.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.gif" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:2.29%;left:4.1%;width:106.88%;height:9.01%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='mso-line-spacing:" 0 &#1;";mso-margin-left-alt:233;
+mso-text-indent-alt:0;position:absolute;top:11.76%;left:.99%;width:99.0%;
+height:82.35%'><span style='font-family:Verdana;font-size:73%'><i>WebQTL to
+exploring upstream control.</i></span></div>
+</div>
+<img border=0 src="slide0019_image085.gif" style='position:absolute;top:27.2%;
+left:1.72%;width:96.68%;height:51.76%'>
+<div class=O style='position:absolute;top:13.78%;left:19.33%;width:60.52%;
+height:6.53%'><span style='font-size:233%;color:#E9EB5D'><i>App maps on Chr 16
+here</i></span></div>
+<img border=0 src="slide0019_image086.gif" style='position:absolute;top:15.9%;
+left:68.34%;width:14.43%;height:37.98%'><img border=0
+src="slide0019_image087.gif" style='position:absolute;top:53.18%;left:13.5%;
+width:14.43%;height:37.98%'>
+<div class=O style='position:absolute;top:82.86%;left:26.88%;width:90.59%;
+height:14.48%'>
+<div style='position:absolute;top:0%;left:0%;width:83.33%;height:51.21%'><span
+style='font-size:267%;color:#E9EB5D'><i>Is App modulated by Chr 2?<br>
+</i></span></div>
+<div style='position:absolute;top:50.0%;left:0%;width:100.0%;height:51.21%'><span
+style='font-size:267%;color:#E9EB5D'><i>Probably, but don�t bet the farm. </i></span></div>
+</div>
+</div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>This is the main output
+  type: a so-called full genome interval map.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>The X-axis represents all
+  19 autosomes and the X chromosome as if they were laid end to end with short
+  gaps between the telomere of one chromosome and the centromere of the next
+  chromosome (mouse chromsomes only have a single long arm and the centromere represents
+  the origin of each chromosome for numerical purpose: 0 centimorgans and
+  almost 0 megabases). The blue labels along the bottom of the figure list a
+  subset of markers that were used in mapping. We used 753 markers to perform
+  the mapping but here we just list five markers per chromosome.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>The thick blue wavy line
+  running across chromsomes summarizes the strength of association between
+  variation in the phenotype (App expression differences) and the two genotypes
+  of 753 markers and the intervals between markers (hence, interval mapping).<span
+  style="mso-spacerun: yes">&nbsp; </span>The height of the wave (blue Y-axis
+  to the left) provides the likelihood ratio statistic (LRS). Divide by 4.61 to
+  convert these values to LOD scores.<span style="mso-spacerun: yes">&nbsp;
+  </span>Or you can read them as a chi-square-like statistic.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>The red line and the red
+  axis to the far right provides an estimate of the effect<span
+  style="mso-spacerun: yes">&nbsp; </span>that a QTL has on expression of App
+  (this estimate of the addtive effect tends to be an overestimate). If the red
+  line is below the X-axis then this means that the allele inherited from
+  C57BL/6J (B6 or B) at a particular marker is associated with higher values.
+  If the red line is above the X-axis then the DBA/2J allele (D2 or D) is
+  associated with higher traits. Multiply the additive effect size by 2 to
+  estimate the difference between the set of strains that have the B/B genotype
+  and the D/D genotype at a specific marker. For example, on Chr 2 the red
+  line<span style="mso-spacerun: yes">&nbsp; </span>peaks at a value<span
+  style="mso-spacerun: yes">&nbsp; </span>of about 0.25. That means that this
+  region of chromosome 2 is responsible for a 0.5 unit expression difference
+  between B/B strains and the D/D strains. Since the units are log base 2, this
+  is 2^0.5, or about a 41% difference in expression with the D/D group being
+  high.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>The yellow histogram bars:
+  These summarize the results of a whole-genome bootstrap of the trait that is
+  performed 1000 times. What is a bootstrap? A bootstrap provides you a metho
+  of evaluating whether results are robust. If we drop out one strain, do we
+  still get the same results? When mapping quantitative traits, each strain
+  normally gets one equally weighted vote. But inthe bootstrap procedure, we
+  give each strain a random weighting factor of between 0 and 1.<span
+  style="mso-spacerun: yes">&nbsp; </span>We then remap the trait and find THE
+  SINGLE BEST LRS VALUE per bootstrap. We do this 1000 times. In this example,
+  most bootstrap results cluster on Chr 2 under the LRS peak. That is somewhat
+  reassuring. But notice that a substantial number of bootstrap results prefer
+  Chr 7 or Chr 18.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>The horizontal dashed
+  lines at 9.6 and 15.9. These lines are the LRS values associated with the
+  suggestive and significant false positive rates for genome-wide scans
+  established by permuations of phenotypes across genotypes. We shuffle
+  randomly 1000 times and obtain a distribution of peak LRS scores to generate
+  a null distribution. Five percent of the time, one of these permuted data
+  sets will have a peak LRS higher than 15.9. We call that level the 0.05
+  significance threshold for a whole genome scan. The p = 0.67 point is the the
+  suggestive level, and corresponds to the green dashed line.<span
+  style="mso-spacerun: yes">&nbsp; </span>These thresholds are conservative for
+  transcripts that have expression variation that is highly heritable. The
+  putative or suggestive QTL on Chr 2 is probably more than just suggestive.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>One other point: the
+  mapping procedure we use is computationally very fast, but it is relatively
+  simple. We are not looking for gene-gene interactions and we are not fitting
+  multiple QTLs in combinations.<span style="mso-spacerun: yes">&nbsp;
+  </span>Consider this QTL analysis a first pass that will highlight hot spots
+  and warm spots that are worth following up on using more sophisticated
+  models.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>CLICKABLE REGIONS:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>1. If you click on the
+  Chromosome number then you will generate a new map just for that chromosome.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>2. If you click on the
+  body of the map, say on the blue line, then you will generate a view<span
+  style="mso-spacerun: yes">&nbsp; </span>on a 10 Mb window of that part of the
+  genome from the UCSC Genome Browser web site.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>3. If you click on a
+  marker symbol, then you will generate a new Trait data and editing window
+  with the genotypes loaded into the window just like any other trait. More on
+  this later.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>NOTE: you can drag these
+  maps off of the browser window and onto your desktop. The will be saved as
+  PNG or PDF files. You can import them into Photoshop or other programs.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0019_image085.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0019_image085.gif
new file mode 100755
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--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0019_image085.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0019_image086.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0019_image086.gif
new file mode 100755
index 00000000..3327e4da
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+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0019_image086.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0019_image087.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0019_image087.gif
new file mode 100755
index 00000000..227fce55
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0019_image087.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0019_notes_pane.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0019_notes_pane.htm
new file mode 100755
index 00000000..cbe88cf0
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0019_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>This is the main output
+  type: a so-called full genome interval map.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>The X-axis represents all
+  19 autosomes and the X chromosome as if they were laid end to end with short
+  gaps between the telomere of one chromosome and the centromere of the next
+  chromosome (mouse chromsomes only have a single long arm and the centromere represents
+  the origin of each chromosome for numerical purpose: 0 centimorgans and
+  almost 0 megabases). The blue labels along the bottom of the figure list a
+  subset of markers that were used in mapping. We used 753 markers to perform
+  the mapping but here we just list five markers per chromosome.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>The thick blue wavy line
+  running across chromsomes summarizes the strength of association between
+  variation in the phenotype (App expression differences) and the two genotypes
+  of 753 markers and the intervals between markers (hence, interval mapping).<span
+  style="mso-spacerun: yes">&nbsp; </span>The height of the wave (blue Y-axis
+  to the left) provides the likelihood ratio statistic (LRS). Divide by 4.61 to
+  convert these values to LOD scores.<span style="mso-spacerun: yes">&nbsp;
+  </span>Or you can read them as a chi-square-like statistic.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>The red line and the red
+  axis to the far right provides an estimate of the effect<span
+  style="mso-spacerun: yes">&nbsp; </span>that a QTL has on expression of App
+  (this estimate of the addtive effect tends to be an overestimate). If the red
+  line is below the X-axis then this means that the allele inherited from
+  C57BL/6J (B6 or B) at a particular marker is associated with higher values.
+  If the red line is above the X-axis then the DBA/2J allele (D2 or D) is
+  associated with higher traits. Multiply the additive effect size by 2 to
+  estimate the difference between the set of strains that have the B/B genotype
+  and the D/D genotype at a specific marker. For example, on Chr 2 the red
+  line<span style="mso-spacerun: yes">&nbsp; </span>peaks at a value<span
+  style="mso-spacerun: yes">&nbsp; </span>of about 0.25. That means that this
+  region of chromosome 2 is responsible for a 0.5 unit expression difference
+  between B/B strains and the D/D strains. Since the units are log base 2, this
+  is 2^0.5, or about a 41% difference in expression with the D/D group being
+  high.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>The yellow histogram bars:
+  These summarize the results of a whole-genome bootstrap of the trait that is
+  performed 1000 times. What is a bootstrap? A bootstrap provides you a metho
+  of evaluating whether results are robust. If we drop out one strain, do we
+  still get the same results? When mapping quantitative traits, each strain
+  normally gets one equally weighted vote. But inthe bootstrap procedure, we
+  give each strain a random weighting factor of between 0 and 1.<span
+  style="mso-spacerun: yes">&nbsp; </span>We then remap the trait and find THE
+  SINGLE BEST LRS VALUE per bootstrap. We do this 1000 times. In this example,
+  most bootstrap results cluster on Chr 2 under the LRS peak. That is somewhat
+  reassuring. But notice that a substantial number of bootstrap results prefer
+  Chr 7 or Chr 18.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>The horizontal dashed
+  lines at 9.6 and 15.9. These lines are the LRS values associated with the
+  suggestive and significant false positive rates for genome-wide scans
+  established by permuations of phenotypes across genotypes. We shuffle
+  randomly 1000 times and obtain a distribution of peak LRS scores to generate
+  a null distribution. Five percent of the time, one of these permuted data
+  sets will have a peak LRS higher than 15.9. We call that level the 0.05
+  significance threshold for a whole genome scan. The p = 0.67 point is the the
+  suggestive level, and corresponds to the green dashed line.<span
+  style="mso-spacerun: yes">&nbsp; </span>These thresholds are conservative for
+  transcripts that have expression variation that is highly heritable. The
+  putative or suggestive QTL on Chr 2 is probably more than just suggestive.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>One other point: the
+  mapping procedure we use is computationally very fast, but it is relatively
+  simple. We are not looking for gene-gene interactions and we are not fitting
+  multiple QTLs in combinations.<span style="mso-spacerun: yes">&nbsp;
+  </span>Consider this QTL analysis a first pass that will highlight hot spots
+  and warm spots that are worth following up on using more sophisticated
+  models.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>CLICKABLE REGIONS:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>1. If you click on the
+  Chromosome number then you will generate a new map just for that chromosome.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>2. If you click on the
+  body of the map, say on the blue line, then you will generate a view<span
+  style="mso-spacerun: yes">&nbsp; </span>on a 10 Mb window of that part of the
+  genome from the UCSC Genome Browser web site.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>3. If you click on a
+  marker symbol, then you will generate a new Trait data and editing window
+  with the genotypes loaded into the window just like any other trait. More on
+  this later.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>NOTE: you can drag these
+  maps off of the browser window and onto your desktop. The will be saved as
+  PNG or PDF files. You can import them into Photoshop or other programs.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0020.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0020.htm
new file mode 100755
index 00000000..d21bef3e
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0020.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content="Jun-19-03: The whole neighborhood is modulated!">
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0020.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.gif" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:2.29%;left:4.1%;width:105.82%;height:9.01%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='mso-line-spacing:" 0 &#1;";position:absolute;top:11.76%;
+left:1.25%;width:98.87%;height:82.35%'><span style='font-family:Verdana;
+font-size:73%'><i>The whole neighborhood is modulated!</i></span></div>
+</div>
+<img border=0 src="slide0020_image088.gif" style='position:absolute;top:13.07%;
+left:9.53%;width:80.79%;height:80.38%'></div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>App has a suggestive QTL
+  on Chr 2. What about the neighbors that we defined as having shared
+  expression patterns. This figure shows that members of the immediate App
+  neigborhood share a weak Chr 2 QTL.<span style="mso-spacerun: yes">&nbsp;
+  </span>That is what the blue oval in the background is meant to represent.
+  But some transcripts, such as Ndr4 and Psen2 do not share this Chr 2
+  interval.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>QUESTION: What kind of
+  headway can we make in detemining what polymorphism or polymorphisms on Chr 2
+  near 130 Mb might contribute to the variance in the expression of all of
+  these important transcripts?</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0020_image088.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0020_image088.gif
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diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0020_notes_pane.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0020_notes_pane.htm
new file mode 100755
index 00000000..78ea1866
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0020_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>App has a suggestive QTL
+  on Chr 2. What about the neighbors that we defined as having shared
+  expression patterns. This figure shows that members of the immediate App
+  neigborhood share a weak Chr 2 QTL.<span style="mso-spacerun: yes">&nbsp;
+  </span>That is what the blue oval in the background is meant to represent.
+  But some transcripts, such as Ndr4 and Psen2 do not share this Chr 2
+  interval.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>QUESTION: What kind of
+  headway can we make in detemining what polymorphism or polymorphisms on Chr 2
+  near 130 Mb might contribute to the variance in the expression of all of
+  these important transcripts?</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0021.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0021.htm
new file mode 100755
index 00000000..3d02bcf8
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0021.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content="Jun-19-03: Which gene is the QTL?">
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0021.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.gif" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:2.29%;left:4.1%;width:93.9%;height:9.01%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='mso-line-spacing:" 0 &#1;";position:absolute;top:11.76%;
+left:1.41%;width:97.03%;height:82.35%'><span style='font-family:Verdana;
+font-size:73%'><i>Which gene is the QTL?</i></span></div>
+</div>
+<img border=0 src="slide0021_image089.gif" style='position:absolute;top:13.07%;
+left:5.03%;width:58.27%;height:37.98%'><img border=0
+src="slide0021_image090.gif" style='position:absolute;top:46.81%;left:3.31%;
+width:68.87%;height:51.94%'><img border=0 src="slide0021_image091.gif"
+style='position:absolute;top:38.51%;left:55.62%;width:24.76%;height:25.08%'>
+<div class=O style='position:absolute;top:7.77%;left:75.09%;width:21.05%;
+height:28.97%'>
+<div style='text-align:center;position:absolute;top:0%;left:8.17%;width:83.64%;
+height:25.6%'><span style='font-size:267%;color:#E9EB5D'><i>Right <br>
+</i></span></div>
+<div style='text-align:center;position:absolute;top:25.0%;left:0%;width:100.0%;
+height:25.6%'><span style='font-size:267%;color:#E9EB5D'><i>position<br>
+</i></span></div>
+<div style='text-align:center;position:absolute;top:50.0%;left:8.17%;
+width:83.64%;height:25.6%'><span style='font-size:267%;color:#E9EB5D'><i>&amp;<br>
+</i></span></div>
+<div style='text-align:center;position:absolute;top:75.0%;left:8.17%;
+width:83.64%;height:25.6%'><span style='font-size:267%;color:#E9EB5D'><i>high r</i></span></div>
+</div>
+<div class=O style='position:absolute;top:50.7%;left:72.58%;width:28.87%;
+height:14.48%'>
+<div style='text-align:center;position:absolute;top:0%;left:8.71%;width:83.48%;
+height:51.21%'><span style='font-size:267%;color:#E9EB5D'><i>good<br>
+</i></span></div>
+<div style='text-align:center;position:absolute;top:50.0%;left:0%;width:100.0%;
+height:51.21%'><span style='font-size:267%;color:#E9EB5D'><i>candidates</i></span></div>
+</div>
+</div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face="Times New Roman" size=4><b>Candidate
+  Genes: </b><span style="mso-spacerun: yes">&nbsp;</span>The best we can do at
+  this point is to make an educated guess about the candidacy status of all
+  genes in the QTL support interval. For sake of argument, lets say that we are
+  confident that the polymorphism is located between 130 and 150 Mb (20 Mb,
+  equivalent to roughly 10 cM). There will typically be 12 to 15 genes per Mb,
+  so we now would like to evaluate 240 to 300 positional candidates. We would
+  like to highlight the biologically relevant subset of candidates. We could
+  look through gene ontologies and expression levels to help us winnow the
+  list. An alternate way avaiable using WebQTL is to generate a list of those
+  genes in this 20 Mb interval that have transcripts that co-vary in expression
+  with App expression.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face="Times New Roman" size=4>To do this, go
+  back to the Trait Data and Editing window. Sort the correlations by position.
+  Select Return = 500. Then scroll down the list to see positional candidates
+  that share expression with App.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face="Times New Roman" size=4>There are
+  several candidates that have high correlation with App even in this short 20
+  Mb interval. We can rank them by correlation, but they are all close.<span
+  style="mso-spacerun: yes">&nbsp; </span>There is one other imporant approach
+  to ranking these candidates. Are they likely to contain polymorphisms? We can
+  assess the likelihood that they contain polymorphisms by mapping each
+  transcript to see if any have strong cis QTLs. The logic of this search is
+  that a transcript that has a strong cis-QTL is likely to contain functional
+  polymorphisms that effect its own expression. This make is more like that the
+  transcript is a �causative� factor since it is likely to be polymorphic.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0021_image089.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0021_image089.gif
new file mode 100755
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--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0021_image089.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0021_image090.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0021_image090.gif
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diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0021_image091.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0021_image091.gif
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diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0021_notes_pane.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0021_notes_pane.htm
new file mode 100755
index 00000000..e25a8134
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0021_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face="Times New Roman" size=4><b>Candidate
+  Genes: </b><span style="mso-spacerun: yes">&nbsp;</span>The best we can do at
+  this point is to make an educated guess about the candidacy status of all
+  genes in the QTL support interval. For sake of argument, lets say that we are
+  confident that the polymorphism is located between 130 and 150 Mb (20 Mb,
+  equivalent to roughly 10 cM). There will typically be 12 to 15 genes per Mb,
+  so we now would like to evaluate 240 to 300 positional candidates. We would
+  like to highlight the biologically relevant subset of candidates. We could
+  look through gene ontologies and expression levels to help us winnow the
+  list. An alternate way avaiable using WebQTL is to generate a list of those
+  genes in this 20 Mb interval that have transcripts that co-vary in expression
+  with App expression.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face="Times New Roman" size=4>To do this, go
+  back to the Trait Data and Editing window. Sort the correlations by position.
+  Select Return = 500. Then scroll down the list to see positional candidates
+  that share expression with App.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face="Times New Roman" size=4>There are
+  several candidates that have high correlation with App even in this short 20
+  Mb interval. We can rank them by correlation, but they are all close.<span
+  style="mso-spacerun: yes">&nbsp; </span>There is one other imporant approach
+  to ranking these candidates. Are they likely to contain polymorphisms? We can
+  assess the likelihood that they contain polymorphisms by mapping each
+  transcript to see if any have strong cis QTLs. The logic of this search is
+  that a transcript that has a strong cis-QTL is likely to contain functional
+  polymorphisms that effect its own expression. This make is more like that the
+  transcript is a �causative� factor since it is likely to be polymorphic.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
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new file mode 100755
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+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0022.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jun-19-03>
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0022.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.gif" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:1.59%;left:3.97%;width:104.1%;height:13.78%;
+filter:DropShadow(Color=#000000, OffX=4, OffY=4)'>
+<div class=O style='mso-line-spacing:" 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16;position:absolute;top:1.28%;left:1.27%;width:98.72%;height:88.46%'><span
+style='position:absolute;top:0%;left:0%;width:100.0%'><span style='font-size:
+233%;color:#E9EB5D'><i>Only one of these candidates is a functional </i></span></span><span
+style='position:absolute;top:46.37%;left:0%;width:85.69%'><span
+style='font-size:233%;color:#E9EB5D'><i>polymorphism</i></span></span></div>
+</div>
+<img border=0 src="slide0022_image092.gif" style='position:absolute;top:15.54%;
+left:2.64%;width:41.98%;height:84.45%'><img border=0
+src="slide0022_image093.gif" style='position:absolute;top:31.44%;left:26.09%;
+width:27.15%;height:5.83%'>
+<div class=O style='position:absolute;top:28.09%;left:54.3%;width:50.06%;
+height:21.73%'>
+<div style='position:absolute;top:0%;left:0%;width:100.0%;height:25.2%'><span
+style='font-size:200%;color:#E9EB5D'><i>Hars2 = 0610006H08Rik<br>
+</i></span></div>
+<span style='position:absolute;top:24.39%;left:0%;width:94.7%'><span
+style='font-size:200%;color:#E9EB5D'><i>is a cis-QTL with a very </i></span></span><span
+style='position:absolute;top:49.59%;left:0%;width:84.39%'><span
+style='font-size:200%;color:#E9EB5D'><i>high likelihood ratio </i></span></span><span
+style='position:absolute;top:73.98%;left:0%;width:84.39%'><span
+style='font-size:200%;color:#E9EB5D'><i>statistic (LRS) score</i></span><span
+style='font-size:267%;color:#E9EB5D;mso-special-format:lastCR;display:none'><i><br>
+</i></span></span></div>
+</div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>When you do this you
+  will find that only the transcript 0610006H08Rik has a strong cis QTL. See
+  the slide above. The LRS peaks above 35<span style="mso-spacerun: yes">&nbsp;
+  </span>(LOD of greater than 7.5). It turns out that this transcript is really
+  Hars2, also known as histydl tRNA synthase 2.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0022_image092.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0022_image092.gif
new file mode 100755
index 00000000..ce345af6
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0022_image092.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0022_image093.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0022_image093.gif
new file mode 100755
index 00000000..fcb4d455
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0022_image093.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0022_notes_pane.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0022_notes_pane.htm
new file mode 100755
index 00000000..5ab1a7fe
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0022_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>When you do this you
+  will find that only the transcript 0610006H08Rik has a strong cis QTL. See
+  the slide above. The LRS peaks above 35<span style="mso-spacerun: yes">&nbsp;
+  </span>(LOD of greater than 7.5). It turns out that this transcript is really
+  Hars2, also known as histydl tRNA synthase 2.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0023.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0023.htm
new file mode 100755
index 00000000..dac0fddc
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0023.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jun-19-03>
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0023.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.gif" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:1.59%;left:3.97%;width:104.1%;height:8.12%;
+filter:DropShadow(Color=#000000, OffX=4, OffY=4)'>
+<div class=O style='mso-line-spacing:" 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16;position:absolute;top:2.17%;left:1.27%;width:98.85%;height:80.43%'><span
+style='font-size:233%;color:#E9EB5D'><i>Hars2 probe level analysis: 16 PMs
+mapped</i></span></div>
+</div>
+<img border=0 src="slide0023_image094.gif" style='position:absolute;top:10.77%;
+left:13.64%;width:72.58%;height:84.8%'><img border=0
+src="slide0023_image095.gif" style='position:absolute;top:59.18%;left:2.38%;
+width:41.05%;height:36.74%'><img border=0 src="slide0023_image096.gif"
+style='position:absolute;top:60.07%;left:36.82%;width:26.75%;height:19.08%'><img
+border=0 src="slide0023_image097.gif" style='position:absolute;top:33.39%;
+left:21.19%;width:64.37%;height:2.65%'><img border=0
+src="slide0023_image098.gif" style='position:absolute;top:35.68%;left:21.19%;
+width:64.37%;height:2.65%'><img border=0 src="slide0023_image099.gif"
+style='position:absolute;top:38.33%;left:21.19%;width:64.37%;height:2.65%'><img
+border=0 src="slide0023_image100.gif" style='position:absolute;top:19.78%;
+left:20.79%;width:28.74%;height:21.73%'>
+<div class=O style='position:absolute;top:28.09%;left:30.06%;width:4.9%;
+height:3.35%'><span style='font-size:117%;color:#FF0F0F'><i>SNP</i></span></div>
+<div class=O style='mso-line-spacing:"100 50 0";position:absolute;top:29.15%;
+left:40.13%;width:18.67%;height:3.35%'><span style='font-size:117%;color:#FF0F0F'>C
+in B6, T in D2 </span><span style='font-size:150%;color:black;mso-special-format:
+lastCR;display:none'><b><br>
+</b></span></div>
+<div class=O style='position:absolute;top:36.39%;left:50.99%;width:9.8%;
+height:3.35%'><span style='font-size:117%;color:#003399;mso-color-index:4'><i>no
+SNPs</i></span></div>
+</div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Let�s look at Hars2 in
+  more detail by mapping all of the perfect match probes (16 of them) that
+  target this transcript.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Go back to the Trait
+  Data and Editing window and select Chr 2 (rather than ALL as shown above) and
+  also select PM Probes. Then click on Interval Mapping button.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>You will get the
+  illustration above, but without the sequence data that we have added.<span
+  style="mso-spacerun: yes">&nbsp; </span>The 16 perfect match probes are
+  arranged in sequence (red is 5 prime, blue is the 3 prime end). For example,
+  the 5 prime-most primer 307387 has the sequence CACTG..... It also has a
+  polymorphism at the 17 nucleotide of this 25 nt probe sequence.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>How do we know that the
+  5 prime probe is polymorphic? By looking up the sequence in the Celera
+  Genomics databases which often contqains sequence data for C57BL/6J (B6
+  above) and for DBA/2J.<span style="mso-spacerun: yes">&nbsp; </span>But two
+  blue probes (14 and 15) do NOT contain SNPs but still have very large LRS
+  scores. The other probes do not perform so wel. Highly variable probe
+  performance is probably a result of the very different stacking energies of
+  DNA-RNA duplexes.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0023_image094.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0023_image094.gif
new file mode 100755
index 00000000..00e1c02c
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0023_image094.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0023_image095.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0023_image095.gif
new file mode 100755
index 00000000..cd8bd524
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0023_image095.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0023_image096.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0023_image096.gif
new file mode 100755
index 00000000..1191b566
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0023_image096.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0023_image097.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0023_image097.gif
new file mode 100755
index 00000000..de56d1e8
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0023_image097.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0023_image098.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0023_image098.gif
new file mode 100755
index 00000000..f84992a8
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0023_image098.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0023_image099.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0023_image099.gif
new file mode 100755
index 00000000..719eb8e2
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0023_image099.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0023_image100.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0023_image100.gif
new file mode 100755
index 00000000..2b932b21
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0023_image100.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0023_notes_pane.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0023_notes_pane.htm
new file mode 100755
index 00000000..418d3b45
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0023_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Let�s look at Hars2 in
+  more detail by mapping all of the perfect match probes (16 of them) that
+  target this transcript.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Go back to the Trait
+  Data and Editing window and select Chr 2 (rather than ALL as shown above) and
+  also select PM Probes. Then click on Interval Mapping button.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>You will get the
+  illustration above, but without the sequence data that we have added.<span
+  style="mso-spacerun: yes">&nbsp; </span>The 16 perfect match probes are
+  arranged in sequence (red is 5 prime, blue is the 3 prime end). For example,
+  the 5 prime-most primer 307387 has the sequence CACTG..... It also has a
+  polymorphism at the 17 nucleotide of this 25 nt probe sequence.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>How do we know that the
+  5 prime probe is polymorphic? By looking up the sequence in the Celera
+  Genomics databases which often contqains sequence data for C57BL/6J (B6
+  above) and for DBA/2J.<span style="mso-spacerun: yes">&nbsp; </span>But two
+  blue probes (14 and 15) do NOT contain SNPs but still have very large LRS
+  scores. The other probes do not perform so wel. Highly variable probe
+  performance is probably a result of the very different stacking energies of
+  DNA-RNA duplexes.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0024.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0024.htm
new file mode 100755
index 00000000..4c701e50
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0024.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Jun-19-03: Tissue differences in probe performance">
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0024.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.gif" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'><img
+border=0 src="slide0024_image101.gif"
+alt="Text Box: Tissue differences in probe performance" style='position:absolute;
+top:0%;left:-.79%;width:8.21%;height:89.92%'><img border=0
+src="slide0024_image102.gif" style='position:absolute;top:58.48%;left:6.88%;
+width:62.78%;height:39.22%'>
+<div class=O style='position:absolute;top:17.66%;left:74.3%;width:21.32%;
+height:7.77%'><span style='font-family:"Gill Sans";font-size:300%;color:#E9EB5D'><i>Forebrain</i></span></div>
+<div class=O style='position:absolute;top:79.5%;left:74.3%;width:22.64%;
+height:7.77%'><span style='font-family:"Gill Sans";font-size:300%;color:#E9EB5D'><i>Stem
+cells</i></span></div>
+<img border=0 src="slide0024_image103.gif" style='position:absolute;top:28.97%;
+left:6.75%;width:62.78%;height:36.21%'><img border=0
+src="slide0024_image104.gif" style='position:absolute;top:0%;left:6.62%;
+width:63.04%;height:36.39%'>
+<div class=O style='position:absolute;top:51.06%;left:73.5%;width:25.56%;
+height:7.77%'><span style='font-family:"Gill Sans";font-size:300%;color:#E9EB5D'><i>Cerebellum</i></span></div>
+</div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>The vertical text says it
+  all: Even when using identical probes, mapping performance (and signal)
+  depends on tissue type and mRNA complexity. This is another gene in the Hars2
+  interval. Forebrain and tem cell mRNAs were run on the same U74Av2 array,
+  whereas the cerebellum mRNA was run on the 430A and 430B array set.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0024_image101.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0024_image101.gif
new file mode 100755
index 00000000..0827d03e
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0024_image101.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0024_image102.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0024_image102.gif
new file mode 100755
index 00000000..4da47c13
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0024_image102.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0024_image103.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0024_image103.gif
new file mode 100755
index 00000000..05ef6183
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0024_image103.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0024_image104.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0024_image104.gif
new file mode 100755
index 00000000..36c6885a
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0024_image104.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0024_notes_pane.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0024_notes_pane.htm
new file mode 100755
index 00000000..3a7bdfa1
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0024_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>The vertical text says it
+  all: Even when using identical probes, mapping performance (and signal)
+  depends on tissue type and mRNA complexity. This is another gene in the Hars2
+  interval. Forebrain and tem cell mRNAs were run on the same U74Av2 array,
+  whereas the cerebellum mRNA was run on the 430A and 430B array set.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0025.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0025.htm
new file mode 100755
index 00000000..238b554b
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0025.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Jun-19-03: Is there known biology to link Hars2 with App? ">
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0025.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.gif" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:-3.53%;left:2.11%;width:96.42%;height:18.55%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='mso-line-spacing:" 0 &#1;";mso-margin-left-alt:232;
+mso-text-indent-alt:0;position:absolute;top:30.47%;left:.96%;width:97.39%;
+height:35.23%'><span style='font-size:68%'><i>Is there known biology to link
+Hars2 with App? </i></span></div>
+</div>
+<div style='position:absolute;top:82.15%;left:4.1%;width:96.42%;height:18.55%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'></div>
+<div class=O style='position:absolute;top:62.54%;left:5.16%;width:29.13%;
+height:12.36%'>
+<div style='position:absolute;top:0%;left:0%;width:100.0%;height:34.28%'><span
+style='font-size:150%;color:#E9EB5D;mso-color-index:3'><b>69 SNPs, 1 cSNP:
+<br>
+</b></span></div>
+<div style='position:absolute;top:32.85%;left:0%;width:96.81%;height:34.28%'><span
+style='font-size:150%;color:#E9EB5D;mso-color-index:3'><b>6 exons in NCBI,
+<br>
+</b></span></div>
+<div style='position:absolute;top:65.71%;left:0%;width:100.0%;height:34.28%'><span
+style='font-size:150%;color:#E9EB5D;mso-color-index:3'><b>2 exons in Celera</b></span></div>
+</div>
+<img border=0 src="slide0025_image105.gif" style='position:absolute;top:9.54%;
+left:3.31%;width:60.79%;height:42.57%'><img border=0
+src="slide0025_image106.gif" style='position:absolute;top:28.62%;left:40.0%;
+width:55.76%;height:69.78%'>
+<div class=O style='position:absolute;top:14.13%;left:69.4%;width:23.84%;
+height:6.53%'><span style='font-family:"Gill Sans";font-size:250%;color:#E9EB5D'><i><span
+style="mso-spacerun: yes">&nbsp;</span>Not obvious</i></span></div>
+</div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Hars2 is not a well
+  characterized gene and their is no biology yet to support the hypothesis that
+  Hars2 modulates gene expression, let alone App expression in specific. There
+  are also serious database/assembly discrepancies between Celera and MGSCv3
+  regarding the genomic organization of this gene. But there appear to be
+  approximately 69 SNPs in Hars2, one of which results in a substitution.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0025_image105.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0025_image105.gif
new file mode 100755
index 00000000..242e4087
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0025_image105.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0025_image106.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0025_image106.gif
new file mode 100755
index 00000000..c1453aee
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0025_image106.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0025_notes_pane.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0025_notes_pane.htm
new file mode 100755
index 00000000..ef04157c
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0025_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Hars2 is not a well
+  characterized gene and their is no biology yet to support the hypothesis that
+  Hars2 modulates gene expression, let alone App expression in specific. There
+  are also serious database/assembly discrepancies between Celera and MGSCv3
+  regarding the genomic organization of this gene. But there appear to be
+  approximately 69 SNPs in Hars2, one of which results in a substitution.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0026.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0026.htm
new file mode 100755
index 00000000..4225db8a
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0026.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Jun-19-03: WebQTL     link to  www.webqtl.org/search.html">
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0026.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.gif" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:3.0%;left:2.11%;width:96.42%;height:19.61%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='mso-line-spacing:" 0 &#1;";mso-margin-left-alt:232;
+mso-text-indent-alt:0;position:absolute;top:0%;left:.96%;width:97.39%;
+height:100.0%'><span style='position:absolute;top:0%;left:0%;width:100.0%'><span
+style='font-size:68%'><i>WebQTL<span style="mso-spacerun:
+yes">&nbsp;&nbsp;&nbsp; </span><br>
+</i></span></span><span style='position:
+absolute;top:32.43%;left:4.37%;width:95.76%'><span style='font-size:68%'><i>link
+to <br>
+</i></span></span><span style='position:absolute;top:58.55%;left:4.37%;
+width:95.76%'><span style='font-size:86%'><i>www.webqtl.org/search.html</i></span><span
+style='font-size:68%;mso-special-format:lastCR;display:none'><i><br>
+</i></span></span></div>
+</div>
+<div style='position:absolute;top:36.57%;left:2.51%;width:73.24%;height:45.05%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=B style='position:absolute;top:0%;left:2.71%;width:97.28%;
+height:81.96%'>
+<div style='mso-line-spacing:" 0 ";mso-margin-left-alt:348;mso-text-indent-alt:
+56;position:absolute;top:0%;left:0%;width:94.6%;height:31.57%'><span
+style='position:absolute;top:0%;left:7.46%;width:92.53%'><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:
+"numbullet3\,1";color:#FBFDB8;position:absolute;left:-8.06%;font-family:Times;
+font-size:99%'>1.</span></span><span style='font-size:94%;color:#E9EB5D;
+mso-color-index:3'>Discovering shared expression </span></span><span
+style='position:absolute;top:43.93%;left:7.46%;width:82.12%'><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3'>patterns<br>
+</span></span></div>
+<div style='mso-line-spacing:" 0 ";mso-margin-left-alt:348;mso-text-indent-alt:
+56;position:absolute;top:41.14%;left:0%;width:84.94%;height:31.57%'><span
+style='position:absolute;top:0%;left:8.31%;width:91.46%'><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:
+"numbullet3\,2";color:#FBFDB8;position:absolute;left:-9.09%;font-family:Times;
+font-size:99%'>2.</span></span><span style='font-size:94%;color:#E9EB5D;
+mso-color-index:3'>Discovering upstream </span></span><span style='position:
+absolute;top:43.93%;left:8.31%;width:91.46%'><span style='font-size:94%;
+color:#E9EB5D;mso-color-index:3'>modulators (QTLs)<br>
+</span></span></div>
+<div style='mso-line-spacing:" 0 &#1;";mso-margin-left-alt:348;mso-text-indent-alt:
+56;position:absolute;top:82.29%;left:0%;width:100.0%;height:17.7%'><span
+style='position:absolute;top:0%;left:7.06%;width:92.75%'><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:
+"numbullet3\,3";color:#FBFDB8;position:absolute;left:-7.61%;font-family:Times;
+font-size:99%'>3.</span></span><span style='font-size:94%;color:#E9EB5D;
+mso-color-index:3'>Discovering downstream targets</span></span></div>
+</div>
+</div>
+<div style='position:absolute;top:82.15%;left:4.1%;width:96.42%;height:18.55%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'></div>
+<img border=0 src="slide0026_image107.gif" style='position:absolute;top:65.9%;
+left:65.29%;width:26.35%;height:10.77%'></div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Part 3.<span
+  style="mso-spacerun: yes">&nbsp; </span>Many investigators would like to
+  discover the set of downstream targets of a gene of interest.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>In a genetic and
+  functional sense, that question can only be addressed effectively if there is
+  genetic variation in the particular gene.<span style="mso-spacerun:
+  yes">&nbsp; </span>We know that Fos is an important transcription factor, but
+  unless it is polymorphic between C57BL/6J and DBA/2J, then it cannot generate
+  a genetic variance signal with which we can work. We can still study
+  covariance of Fos and hundreds of other transcripts (an interesting
+  exercise), but there are no genetic causes-and-effects.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0026_image107.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0026_image107.gif
new file mode 100755
index 00000000..e26b7a56
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0026_image107.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0026_notes_pane.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0026_notes_pane.htm
new file mode 100755
index 00000000..138a5dca
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0026_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Part 3.<span
+  style="mso-spacerun: yes">&nbsp; </span>Many investigators would like to
+  discover the set of downstream targets of a gene of interest.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>In a genetic and
+  functional sense, that question can only be addressed effectively if there is
+  genetic variation in the particular gene.<span style="mso-spacerun:
+  yes">&nbsp; </span>We know that Fos is an important transcription factor, but
+  unless it is polymorphic between C57BL/6J and DBA/2J, then it cannot generate
+  a genetic variance signal with which we can work. We can still study
+  covariance of Fos and hundreds of other transcripts (an interesting
+  exercise), but there are no genetic causes-and-effects.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0027.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0027.htm
new file mode 100755
index 00000000..7701ce1a
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0027.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Jun-19-03: Requirement: The gene must be polymorphic to be genetically �upstream�">
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0027.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.gif" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:2.29%;left:2.51%;width:108.47%;height:18.9%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='mso-line-spacing:" 0 &#1;";position:absolute;top:7.47%;
+left:1.22%;width:98.77%;height:85.04%'><span style='position:absolute;
+top:0%;left:0%;width:100.0%'><span style='font-size:82%'><i>Requirement: The
+gene must be polymorphic to </i></span></span><span style='position:absolute;
+top:51.64%;left:3.7%;width:79.72%'><span style='font-size:82%'><i>be
+genetically �upstream�</i></span><span style='font-size:82%;mso-special-format:
+lastCR;display:none'><br>
+</span></span></div>
+</div>
+<div style='position:absolute;top:21.37%;left:2.51%;width:84.5%;height:15.01%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='mso-line-spacing:" 0 &#1;";position:absolute;top:32.94%;
+left:1.56%;width:98.43%;height:40.0%'><span style='font-size:64%'><i>What are
+targets of the Hars2 polymorphisms?</i></span><span style='font-size:82%;
+mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+<img border=0 src="slide0027_image108.gif" style='position:absolute;top:33.92%;
+left:1.72%;width:49.66%;height:32.15%'><img border=0
+src="slide0027_image109.gif" style='position:absolute;top:33.39%;left:53.37%;
+width:44.23%;height:58.65%'>
+<div class=O style='position:absolute;top:69.96%;left:7.54%;width:51.39%;
+height:21.2%'>
+<div style='position:absolute;top:0%;left:0%;width:84.02%;height:32.5%'><span
+style='font-family:"Gill Sans";font-size:267%;color:#E9EB5D'><i>App and many
+other<br>
+</i></span></div>
+<span style='position:absolute;top:33.33%;left:0%;width:100.0%'><span
+style='font-family:"Gill Sans";font-size:267%;color:#E9EB5D'><i>correlated
+transcripts and </i></span></span><span style='position:absolute;top:67.5%;
+left:0%;width:84.02%'><span style='font-family:"Gill Sans";font-size:267%;
+color:#E9EB5D'><i>other traits.</i></span></span></div>
+</div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>Genes must be polymorphic
+  to generate downstream genetic effects (as opposed to downstream molecular
+  effects). Hars2 meets this condition because we have already mapped a
+  functional polymorphism in the gene. We can therefore posit that Hars2 is a
+  QT gene. What transcripts are downstream? <i>App</i> is one obvious
+  candidate, but there are many more.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>The are several ways to
+  look for downstream targets. The best and most obvious is to look up all
+  transcripts that have high correlations with Hars2 itself. You should know
+  how to do this. An alternative method is shown here for teaching purpose and
+  to show you what to do if your gene of interest is not in our database. You
+  need to know:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Times size=3>1.</font><font face=Verdana
+  size=3> Where your gene is located. You need this information to find a
+  surrogate marker; a marker that is located very close to your gene of
+  interest.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>2. That your gene is
+  polymorphic between C57BL/6J and DBA/2J.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>Let�s look at the
+  correlation of Hars2 with BXD genotypes as shown in the slide above to
+  illustrate how to use markers as surrogate traits.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>Go to the Trait Date and
+  Editing window one more time. We want the data for Hars2 this time, not App.
+  You should be able to show that Hars2 has a high<span style="mso-spacerun:
+  yes">&nbsp; </span>correlation with D2Mit423 as shown in the slide above.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>By clicking on the symbol
+  D2Mit423 in the Correlation window, you will generate a new Trait Data window
+  shown on the next slide.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0027_image108.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0027_image108.gif
new file mode 100755
index 00000000..c4a27e18
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0027_image108.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0027_image109.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0027_image109.gif
new file mode 100755
index 00000000..c03ea994
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0027_image109.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0027_notes_pane.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0027_notes_pane.htm
new file mode 100755
index 00000000..9614c538
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0027_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Genes must be polymorphic
+  to generate downstream genetic effects (as opposed to downstream molecular
+  effects). Hars2 meets this condition because we have already mapped a
+  functional polymorphism in the gene. We can therefore posit that Hars2 is a
+  QT gene. What transcripts are downstream? <i>App</i> is one obvious
+  candidate, but there are many more.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>The are several ways to
+  look for downstream targets. The best and most obvious is to look up all
+  transcripts that have high correlations with Hars2 itself. You should know
+  how to do this. An alternative method is shown here for teaching purpose and
+  to show you what to do if your gene of interest is not in our database. You
+  need to know:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Times size=2>1.</font><font face=Verdana
+  size=2> Where your gene is located. You need this information to find a
+  surrogate marker; a marker that is located very close to your gene of
+  interest.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>2. That your gene is
+  polymorphic between C57BL/6J and DBA/2J.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Let�s look at the
+  correlation of Hars2 with BXD genotypes as shown in the slide above to
+  illustrate how to use markers as surrogate traits.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Go to the Trait Date and
+  Editing window one more time. We want the data for Hars2 this time, not App.
+  You should be able to show that Hars2 has a high<span style="mso-spacerun:
+  yes">&nbsp; </span>correlation with D2Mit423 as shown in the slide above.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>By clicking on the symbol
+  D2Mit423 in the Correlation window, you will generate a new Trait Data window
+  shown on the next slide.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0028.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0028.htm
new file mode 100755
index 00000000..28930694
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0028.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Jun-19-03: Direct correlations between genotypes and traits">
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0028.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.gif" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:-1.23%;left:2.51%;width:110.06%;height:11.66%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='mso-line-spacing:" 0 &#1;";position:absolute;top:16.66%;
+left:1.2%;width:98.79%;height:66.66%'><span style='font-size:82%'><i>Direct
+correlations between genotypes and traits</i></span><span style='font-size:
+82%;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+<div class=O style='position:absolute;top:22.43%;left:3.44%;width:34.83%;
+height:42.4%'>
+<div style='position:absolute;top:0%;left:0%;width:100.0%;height:16.25%'><span
+style='font-family:"Gill Sans";font-size:267%;color:#E9EB5D'><i>App and<br>
+</i></span></div>
+<span style='position:absolute;top:16.66%;left:0%;width:100.0%'><span
+style='font-family:"Gill Sans";font-size:267%;color:#E9EB5D'><i>correlated
+traits </i></span></span><span style='position:absolute;top:33.33%;left:0%;
+width:100.0%'><span style='font-family:"Gill Sans";font-size:267%;color:#E9EB5D'><i>would
+be obvious </i></span></span><span style='position:absolute;top:50.0%;
+left:0%;width:100.0%'><span style='font-family:"Gill Sans";font-size:267%;
+color:#E9EB5D'><i>candidates to </i></span></span><span style='position:absolute;
+top:67.08%;left:0%;width:100.0%'><span style='font-family:"Gill Sans";
+font-size:267%;color:#E9EB5D'><i>correlate with </i></span></span><span
+style='position:absolute;top:83.75%;left:0%;width:100.0%'><span
+style='font-family:"Gill Sans";font-size:267%;color:#E9EB5D'><i>D2Mit423</i></span></span></div>
+<img border=0 src="slide0028_image110.gif" style='position:absolute;top:10.07%;
+left:33.37%;width:40.0%;height:87.63%'><img border=0
+src="slide0028_image111.gif" style='position:absolute;top:82.68%;left:65.29%;
+width:14.7%;height:7.24%'>
+<div class=O style='position:absolute;top:79.68%;left:82.11%;width:13.11%;
+height:13.95%'>
+<div style='position:absolute;top:0%;left:0%;width:100.0%;height:49.36%'><span
+style='font-family:"Gill Sans";font-size:267%;color:#E9EB5D'><i>B = -1<br>
+</i></span></div>
+<div style='position:absolute;top:50.63%;left:0%;width:94.94%;height:49.36%'><span
+style='font-family:"Gill Sans";font-size:267%;color:#E9EB5D'><i>D = 1</i></span></div>
+</div>
+</div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>We can review the set of
+  correlations between the marker D2Mit423 and all transcripts in
+  forebrain.<span style="mso-spacerun: yes">&nbsp; </span>This is in essence a
+  backwards way of mapping QTLs. We are considering one marker and asking what
+  traits correlate to the marker and how well.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0028_image110.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0028_image110.gif
new file mode 100755
index 00000000..f70a8f8b
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0028_image110.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0028_image111.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0028_image111.gif
new file mode 100755
index 00000000..426065e3
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0028_image111.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0028_notes_pane.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0028_notes_pane.htm
new file mode 100755
index 00000000..89b67431
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0028_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>We can review the set of
+  correlations between the marker D2Mit423 and all transcripts in
+  forebrain.<span style="mso-spacerun: yes">&nbsp; </span>This is in essence a
+  backwards way of mapping QTLs. We are considering one marker and asking what
+  traits correlate to the marker and how well.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0029.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0029.htm
new file mode 100755
index 00000000..0bb9da8b
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0029.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Jun-19-03: What�s downstream of Chr 2 near Hars2?">
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0029.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.gif" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:-.35%;left:2.51%;width:96.95%;height:11.66%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='mso-line-spacing:" 0 &#1;";position:absolute;top:16.66%;
+left:1.36%;width:98.77%;height:66.66%'><span style='font-size:82%'><i>What�s
+downstream of Chr 2 near Hars2?</i></span><span style='font-size:82%;
+mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+<img border=0 src="slide0029_image112.gif" style='position:absolute;top:9.54%;
+left:1.98%;width:83.04%;height:79.5%'>
+<div style='position:absolute;top:86.92%;left:2.51%;width:111.12%;height:11.66%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='mso-line-spacing:" 0 &#1;";position:absolute;top:27.27%;
+left:1.19%;width:98.8%;height:51.51%'><span style='font-size:64%'><i>Notice
+many Chr 2 hits: Linkage disequilibrium limits specificity</i></span><span
+style='font-size:64%;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+<img border=0 src="slide0029_image113.gif" style='position:absolute;top:27.03%;
+left:7.01%;width:22.38%;height:17.49%'>
+<div class=O style='position:absolute;top:24.73%;left:27.68%;width:16.82%;
+height:4.24%'><span style='font-size:150%;color:#FF0F0F'><b>Click here</b></span></div>
+<img border=0 src="slide0029_image114.gif" style='position:absolute;top:39.22%;
+left:48.21%;width:12.18%;height:5.47%'></div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>The marker D2Mit423
+  correlates moderately well with a number of Chr 2 transcripts. This is due to
+  linkage disequilibrium. These correlations are not due to a molecular
+  interactions other than being close together on a chromosome.<span
+  style="mso-spacerun: yes">&nbsp; </span>But we have circled one transcript,
+  actinin alpha 2, that has a moderately good correlation (0.59) with D2Mit423.
+  If we map this gene we expect to find a suggestive QTL that peaks near
+  D2Mit423</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0029_image112.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0029_image112.gif
new file mode 100755
index 00000000..c1fcf2db
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0029_image112.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0029_image113.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0029_image113.gif
new file mode 100755
index 00000000..a5bebbe9
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0029_image113.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0029_image114.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0029_image114.gif
new file mode 100755
index 00000000..9a070a5b
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0029_image114.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0029_notes_pane.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0029_notes_pane.htm
new file mode 100755
index 00000000..62c56ca6
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0029_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>The marker D2Mit423
+  correlates moderately well with a number of Chr 2 transcripts. This is due to
+  linkage disequilibrium. These correlations are not due to a molecular
+  interactions other than being close together on a chromosome.<span
+  style="mso-spacerun: yes">&nbsp; </span>But we have circled one transcript,
+  actinin alpha 2, that has a moderately good correlation (0.59) with D2Mit423.
+  If we map this gene we expect to find a suggestive QTL that peaks near
+  D2Mit423</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0030.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0030.htm
new file mode 100755
index 00000000..e3dec4be
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0030.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Jun-19-03: What�s downstream of Chr 2 near Hars2?">
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0030.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.gif" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:-.35%;left:2.51%;width:96.95%;height:11.66%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='mso-line-spacing:" 0 &#1;";position:absolute;top:16.66%;
+left:1.36%;width:98.77%;height:66.66%'><span style='font-size:82%'><i>What�s
+downstream of Chr 2 near Hars2?</i></span><span style='font-size:82%;
+mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+<img border=0 src="slide0030_image115.gif" style='position:absolute;top:12.19%;
+left:7.54%;width:61.58%;height:75.61%'>
+<div class=O style='position:absolute;top:90.1%;left:5.16%;width:107.01%;
+height:6.0%'><span style='font-family:"Gill Sans";font-size:233%;color:#E9EB5D'><i>modest
+support that Actn2 is modulated by the Hars2 region</i></span></div>
+</div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>There is some support for
+  the hypothesis that Actn2 is downstream of a polymorphism in the Hars2
+  region. But again, due to the 10 to 20 Mb precision of the mapping data, this
+  relation could be generated by a large number of other polymorphisms close to
+  Hars2. In the absence of a biological connection between Actn2 and Hars2 we
+  have a weak hypothesis. If there were a plausible functional connection
+  between the two genes, then this hypothesis could be quickly upgraded.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0030_image115.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0030_image115.gif
new file mode 100755
index 00000000..48462fa6
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0030_image115.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0030_notes_pane.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0030_notes_pane.htm
new file mode 100755
index 00000000..88bd6165
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0030_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>There is some support for
+  the hypothesis that Actn2 is downstream of a polymorphism in the Hars2
+  region. But again, due to the 10 to 20 Mb precision of the mapping data, this
+  relation could be generated by a large number of other polymorphisms close to
+  Hars2. In the absence of a biological connection between Actn2 and Hars2 we
+  have a weak hypothesis. If there were a plausible functional connection
+  between the two genes, then this hypothesis could be quickly upgraded.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0031.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0031.htm
new file mode 100755
index 00000000..b07ce4c2
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0031.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Jun-19-03: Does Hars2 correlate with Actn2 strongly?">
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0031.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.gif" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:-1.23%;left:2.51%;width:95.49%;height:9.01%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='mso-line-spacing:" 0 &#1;";position:absolute;top:13.72%;
+left:1.38%;width:97.22%;height:76.47%'><span style='font-size:73%'><i>Does
+Hars2 correlate with Actn2 strongly?</i></span><span style='font-size:82%;
+mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+<img border=0 src="slide0031_image116.gif" style='position:absolute;top:7.06%;
+left:2.78%;width:47.15%;height:28.97%'><img border=0
+src="slide0031_image117.gif" style='position:absolute;top:33.21%;left:30.06%;
+width:67.41%;height:66.78%'><img border=0 src="slide0031_image118.gif"
+style='position:absolute;top:17.49%;left:33.24%;width:15.36%;height:15.9%'>
+<div class=O style='position:absolute;top:41.87%;left:2.64%;width:28.47%;
+height:42.4%'><span style='position:absolute;top:0%;left:0%;width:94.41%'><span
+style='font-family:"Gill Sans";font-size:267%;color:#E9EB5D'><i>Plenty of high </i></span></span><span
+style='position:absolute;top:16.66%;left:0%;width:89.76%'><span
+style='font-family:"Gill Sans";font-size:267%;color:#E9EB5D'><i>correlations, </i></span></span><span
+style='position:absolute;top:33.75%;left:0%;width:89.76%'><span
+style='font-family:"Gill Sans";font-size:267%;color:#E9EB5D'><i>including 2 </i></span></span><span
+style='position:absolute;top:50.41%;left:0%;width:100.0%'><span
+style='font-family:"Gill Sans";font-size:267%;color:#E9EB5D'><i>actins, but not
+</i></span></span><span style='position:absolute;top:67.08%;left:0%;width:89.76%'><span
+style='font-family:"Gill Sans";font-size:267%;color:#E9EB5D'><i>to Actn2 </i></span></span><span
+style='position:absolute;top:83.75%;left:0%;width:89.76%'><span
+style='font-family:"Gill Sans";font-size:267%;color:#E9EB5D'><i>specifically.</i></span></span></div>
+<div class=O style='position:absolute;top:16.43%;left:52.84%;width:25.03%;
+height:6.89%'><span style='font-family:"Gill Sans";font-size:267%;color:#E9EB5D'><i>Sort
+by gene</i></span></div>
+</div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>We can test the Hars2 to
+  Actn2 connection directly. This process weakens the putative association. We
+  are ready to move on and examine other candidates in the Hars2 region near
+  D2Mit423.<span style="mso-spacerun: yes">&nbsp; </span>Or in your case, please
+  start from the beginning using other genes and transcripts and tissues that
+  interest you more than this App-Hsp84-Hars2 example.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>This concludes the first
+  demonstation of how to use some of the WebQTL features. Please explore.
+  Please also send feedback for improvements or additions to
+  rwilliam@nb.utmem.edu</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0031_image116.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0031_image116.gif
new file mode 100755
index 00000000..7e1dd508
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0031_image116.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0031_image117.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0031_image117.gif
new file mode 100755
index 00000000..bbc776f5
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0031_image117.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0031_image118.gif b/web/tutorial/ppt/WebQTLDemo_files/slide0031_image118.gif
new file mode 100755
index 00000000..31efe2e2
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0031_image118.gif
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0031_notes_pane.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0031_notes_pane.htm
new file mode 100755
index 00000000..435ca8e2
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0031_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>We can test the Hars2 to
+  Actn2 connection directly. This process weakens the putative association. We
+  are ready to move on and examine other candidates in the Hars2 region near
+  D2Mit423.<span style="mso-spacerun: yes">&nbsp; </span>Or in your case, please
+  start from the beginning using other genes and transcripts and tissues that
+  interest you more than this App-Hsp84-Hars2 example.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>This concludes the first
+  demonstation of how to use some of the WebQTL features. Please explore.
+  Please also send feedback for improvements or additions to
+  rwilliam@nb.utmem.edu</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0032.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0032.htm
new file mode 100755
index 00000000..60a1bee2
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0032.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Jun-19-03: Contact for comments and improvements:">
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0032.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.gif" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:2.29%;left:2.51%;width:94.7%;height:10.24%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='mso-line-spacing:" 0 &#1;";position:absolute;top:18.96%;
+left:1.39%;width:97.2%;height:67.24%'><span style='font-size:73%'><i>Contact
+for comments and improvements:</i></span><span style='font-size:82%;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</div>
+<div style='position:absolute;top:12.54%;left:6.62%;width:90.59%;height:32.68%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='mso-line-spacing:" 0 &#1;";position:absolute;top:0%;
+left:1.46%;width:96.92%;height:100.0%'><span style='position:absolute;
+top:0%;left:0%;width:100.0%'><span style='font-size:82%'>rwilliam@
+nb.utmem.edu<br>
+</span></span><span style='position:absolute;top:25.4%;
+left:4.67%;width:95.47%'><span style='font-size:82%'>kenneth.manly@roswellpark.org<br>
+</span></span><span
+style='position:absolute;top:50.81%;left:4.67%;width:95.47%'><span
+style='font-size:82%'>lulu@ nb.utmem.edu<br>
+</span></span><span
+style='position:absolute;top:75.67%;left:4.67%;width:95.47%'><span
+style='font-size:82%'>echesler@ nb.utmem.edu</span></span></div>
+</div>
+</div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>END</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0032_notes_pane.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0032_notes_pane.htm
new file mode 100755
index 00000000..2af93a35
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0032_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<link id=Main-File rel=Main-File href="WebQTLDemo.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>END</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0033.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0033.htm
new file mode 100755
index 00000000..62f15daa
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0033.htm
@@ -0,0 +1,153 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Jun-19-03: WebQTL Demonstration One please link to  www.webqtl.org/search.html">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
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+-->
+</style>
+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
+		min = window.innerHeight/20;
+		
+	return min+"pt";
+}
+var SoundEnabled = navigator.plugins && navigator.plugins["LiveAudio"];
+function restore() {
+	self.location.reload();
+}
+function set_size() {
+	document.SlideLayer.width = window.innerWidth;
+	document.SlideLayer.height = window.innerHeight;
+}
+document.captureEvents(Event.MOUSEDOWN);
+document.captureEvents(Event.KEYPRESS);
+document.onkeypress = _KPH ;
+document.onmousedown = _KPH ;
+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0033.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
+bgcolor="#000000">
+<script>
+
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+
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+g_left = 0;
+
+if ( g_width < ( g_origWidth * g_height /g_origHeight ) )
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+else
+	g_width = g_origWidth * g_height / g_origHeight;
+	
+g_top = (window.innerHeight - g_height) / 2;
+g_left = (window.innerWidth - g_width) / 2;
+
+document.write( '<layer id=SlideLayer BGCOLOR=#484848 background="" top=' + g_top + ' left=' + g_left + ' height=' + g_height + ' width=' + g_width + ' >' );
+document.SlideLayer.clip.top = 0;
+document.SlideLayer.clip.left = 0;
+document.SlideLayer.clip.height = g_height;
+document.SlideLayer.clip.width = g_width;
+function new_font_size() {
+	var size = 11 * g_width / g_origWidth;
+	if ( size < 1 ) size = 1;
+	return size+"pt";
+}
+</script>
+<div id=SlideObj class=sld style='position:relative;font-size:&{new_font_size()};'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 1 * g_height; mywidth = 1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.gif" height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.06 * g_height; myleft = 0.03 * g_width; myheight = 0.19 * g_height; mywidth = 0.96 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.19 * g_height; mywidth = 0.93 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:" 0 &#1;";mso-margin-left-alt:232;
+mso-text-indent-alt:0;mso-line-spacing:" 0 &#1;";mso-margin-left-alt:232;
+mso-text-indent-alt:0'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.93 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:68%'><i>WebQTL Demonstration
+One<br>
+</i></span></span></layer><script>
+	mytop = 0.06 * g_height; myleft = 0.03 * g_width; myheight = 0.06 * g_height; mywidth = 0.89 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:68%'><i>please link to <br>
+</i></span></span></layer><script>
+	mytop = 0.11 * g_height; myleft = 0.03 * g_width; myheight = 0.08 * g_height; mywidth = 0.89 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:86%'><i>www.webqtl.org/search.html</i></span><span
+style='font-size:68%;mso-special-format:lastCR;display:none'><i><br>
+</i></span></span></layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.31 * g_height; myleft = 0.05 * g_width; myheight = 0.45 * g_height; mywidth = 0.73 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.42 * g_height; mywidth = 0.71 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;font-size:213%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.16 * g_height; mywidth = 0.63 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 ";mso-margin-left-alt:348;mso-text-indent-alt:
+56'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.63 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='mso-special-format:nobullet;display:none;
+color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3'>Part 1: How to discover
+shared </span></span></layer><script>
+	mytop = 0.05 * g_height; myleft = 0.05 * g_width; myheight = 0.06 * g_height; mywidth = 0.55 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:94%;color:#E9EB5D;mso-color-index:
+3'>expression patterns (slides </span></span></layer><script>
+	mytop = 0.1 * g_height; myleft = 0.05 * g_width; myheight = 0.06 * g_height; mywidth = 0.55 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:94%;color:#E9EB5D;mso-color-index:
+3'>2�14)<br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.2 * g_height; myleft = 0 * g_width; myheight = 0.11 * g_height; mywidth = 0.6 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 ";mso-margin-left-alt:348;mso-text-indent-alt:
+56'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.6 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='mso-special-format:nobullet;display:none;
+color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3'>Part 2. Discovering
+upstream </span></span></layer><script>
+	mytop = 0.05 * g_height; myleft = 0.05 * g_width; myheight = 0.06 * g_height; mywidth = 0.55 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:94%;color:#E9EB5D;mso-color-index:
+3'>modulators (15�25)<br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.35 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.71 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 &#1;";mso-margin-left-alt:348;mso-text-indent-alt:
+56'><script>
+	mytop = 0 * g_height; myleft = 0.05 * g_width; myheight = 0.06 * g_height; mywidth = 0.66 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:94%;color:#E9EB5D;mso-color-index:
+3'><span style='mso-special-format:numbullet;color:#FBFDB8;position:absolute;
+left:-7.6%;font-family:Times;font-size:99%'>3.</span></span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3'>Discovering downstream
+targets</span></span></layer></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.21 * g_height; myleft = 0.74 * g_width; myheight = 0.64 * g_height; mywidth = 0.23 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.74 * g_width;
+yy = 0.21 * g_height;
+ht = 0.64 * g_height;
+wd = 0.23 * g_width;
+document.write(
+'<img border=0 src="slide0001_image001.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.79 * g_height; myleft = 0.75 * g_width; myheight = 0.14 * g_height; mywidth = 0.1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:"Arial Rounded MT Bold";font-size:233%;color:#6E6E6E'>RNA</span><span
+style='font-family:"Arial Rounded MT Bold";font-size:300%;color:#6E6E6E;
+display:none'><br>
+</span></div>
+</layer><script>
+	mytop = 0.06 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.08 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:"Arial Rounded MT Bold";font-size:300%;color:#6E6E6E;
+mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.76 * g_height; myleft = 0.04 * g_width; myheight = 0.13 * g_height; mywidth = 0.78 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.77 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:250%;
+color:#E9EB5D;mso-color-index:3'><i>PowerPoint �Normal view� has notes that </i></span></span></layer><script>
+	mytop = 0.06 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.78 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:250%;
+color:#E9EB5D;mso-color-index:3'><i>may be useful companions to these slides.</i></span><span
+style='font-family:"Gill Sans";font-size:250%;color:#E9EB5D;mso-color-index:
+3;mso-special-format:lastCR;display:none'><br>
+</span></span></layer></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Welcome to a short
+   demonstation of WebQTL. Please adjust the wize of windows on your monitor so
+   that you can see part of this page as well as WebQTL windows. WebQTL will
+   produce a potentially large number of new windows (pop-ups), so you may need
+   to modify your browser preferences to permit pop-ups.<span
+   style="mso-spacerun: yes">&nbsp;&nbsp; </span>In this demonstration, we
+   explore one important transcript expressed in the brain: the amyloid beta
+   precursor protein messenger RNA. The product of this mRNA, the APP protein,
+   is associated with Alzheimer disease.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>(Initial version of
+   June 2003 by Rob Williams, Last edits June 16, 2003 by RW.)</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0034.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0034.htm
new file mode 100755
index 00000000..343c0d37
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0034.htm
@@ -0,0 +1,151 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jun-19-03>
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
+		min = window.innerHeight/20;
+		
+	return min+"pt";
+}
+var SoundEnabled = navigator.plugins && navigator.plugins["LiveAudio"];
+function restore() {
+	self.location.reload();
+}
+function set_size() {
+	document.SlideLayer.width = window.innerWidth;
+	document.SlideLayer.height = window.innerHeight;
+}
+document.captureEvents(Event.MOUSEDOWN);
+document.captureEvents(Event.KEYPRESS);
+document.onkeypress = _KPH ;
+document.onmousedown = _KPH ;
+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0034.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
+bgcolor="#000000">
+<script>
+
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+
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+
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+	g_height = g_width * g_origHeight / g_origWidth;
+else
+	g_width = g_origWidth * g_height / g_origHeight;
+	
+g_top = (window.innerHeight - g_height) / 2;
+g_left = (window.innerWidth - g_width) / 2;
+
+document.write( '<layer id=SlideLayer BGCOLOR=#484848 background="" top=' + g_top + ' left=' + g_left + ' height=' + g_height + ' width=' + g_width + ' >' );
+document.SlideLayer.clip.top = 0;
+document.SlideLayer.clip.left = 0;
+document.SlideLayer.clip.height = g_height;
+document.SlideLayer.clip.width = g_width;
+function new_font_size() {
+	var size = 11 * g_width / g_origWidth;
+	if ( size < 1 ) size = 1;
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+</script>
+<div id=SlideObj class=sld style='position:relative;font-size:&{new_font_size()};'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 1 * g_height; mywidth = 1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.gif" height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.06 * g_height; myleft = 0.02 * g_width; myheight = 0.14 * g_height; mywidth = 0.93 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.9 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:nobullet;text-align:left;font-family:"Gill Sans";
+font-weight:normal;font-style:normal;text-decoration:none;text-shadow:none;
+text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;
+font-size:213%;mso-text-raise:0%;mso-line-spacing:" 0 ";mso-margin-left-alt:
+348;mso-text-indent-alt:56;mso-line-spacing:" 0 ";mso-margin-left-alt:348;
+mso-text-indent-alt:56'><span style='mso-special-format:nobullet;display:none;
+color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>or
+webqtl.org/search.html (mirror)</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.16 * g_height; myleft = 0.02 * g_width; myheight = 0.81 * g_height; mywidth = 0.71 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.02 * g_width;
+yy = 0.16 * g_height;
+ht = 0.81 * g_height;
+wd = 0.71 * g_width;
+document.write(
+'<img border=0 src="slide0002_image002.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.49 * g_height; myleft = 0.42 * g_width; myheight = 0.07 * g_height; mywidth = 0.2 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.42 * g_width;
+yy = 0.49 * g_height;
+ht = 0.07 * g_height;
+wd = 0.2 * g_width;
+document.write(
+'<img border=0 src="slide0002_image003.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.5 * g_height; myleft = 0.62 * g_width; myheight = 0.36 * g_height; mywidth = 0.15 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.62 * g_width;
+yy = 0.5 * g_height;
+ht = 0.36 * g_height;
+wd = 0.15 * g_width;
+document.write(
+'<img border=0 src="slide0002_image004.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.6 * g_height; myleft = 0.79 * g_width; myheight = 0.11 * g_height; mywidth = 0.15 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.15 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><span style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;
+mso-color-index:3'>choose a<br>
+</span></div>
+</layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.15 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><span style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;
+mso-color-index:3'>database</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.46 * g_height; myleft = 0.79 * g_width; myheight = 0.11 * g_height; mywidth = 0.21 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><span style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;
+mso-color-index:3'>enter<br>
+</span></div>
+</layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.21 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><span style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;
+mso-color-index:3'><i>amyloid beta</i></span><span style='font-family:"Gill Sans";
+font-size:250%;color:#E9EB5D;mso-color-index:3;mso-special-format:lastCR;
+display:none'><i><br>
+</i></span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.78 * g_height; myleft = 0.79 * g_width; myheight = 0.11 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><span style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;
+mso-color-index:3'>select<br>
+</span></div>
+</layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><span style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;
+mso-color-index:3'>search</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0 * g_height; myleft = 0.03 * g_width; myheight = 0.09 * g_height; mywidth = 0.93 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.91 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div>
+<layer>
+ <div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+ font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+ mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;font-size:213%;
+ mso-text-raise:0%'></div>
+</layer>
+<layer>
+ <div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+ font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+ mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;font-size:213%;
+ mso-text-raise:0%'></div>
+</layer>
+<layer>
+ <div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+ font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+ mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;font-size:213%;
+ mso-text-raise:0%'></div>
+</layer>
+<layer>
+ <div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+ font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+ mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;font-size:213%;
+ mso-text-raise:0%'></div>
+</layer>
+<script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.91 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:nobullet;text-align:left;font-family:"Gill Sans";
+font-weight:normal;font-style:normal;text-decoration:none;text-shadow:none;
+text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;
+font-size:213%;mso-text-raise:0%;mso-line-spacing:" 0 ";mso-margin-left-alt:
+348;mso-text-indent-alt:0;mso-line-spacing:" 0 ";mso-margin-left-alt:348;
+mso-text-indent-alt:0'><span style='mso-special-format:nobullet;display:none;
+color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>link to
+www.webqtl.org/search.html</span></div>
+</layer></div>
+</layer></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>WebQTL can be used to
+   enter your own trait data or to work with data that we have entered for you.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Linking to
+   http://www.webqtl.org/search.html will get you a version of the window
+   above. It may not be identical in layout but it will have the key features.
+   Please follow the intructions on the slide. Of course, we encourage you to
+   enter your own terms of interest.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Two points: If you make
+   a search term too complex you may get no hits. if you make it too simple
+   (for example, APP) then you may get too much. Experiment.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>If you just link to</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>http://www.webqtl.org
+   you will NOT see the window above but will see text that will help you to
+   enter your own data.<span style="mso-spacerun: yes">&nbsp; </span>To get to
+   a version of the window shown above you will need to click on the phrase<span
+   style="mso-spacerun: yes">&nbsp; </span>RNA expression and Phenotype
+   Databases in the upper banner.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>If you do not get a new
+   page within 30 seconds then there is<span style="mso-spacerun: yes">&nbsp;
+   </span>a problem: try the mirror site http://webqtl.org/search.html.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0035.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0035.htm
new file mode 100755
index 00000000..c53c9bbc
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0035.htm
@@ -0,0 +1,116 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content="Jun-19-03: Search results">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
+		min = window.innerHeight/20;
+		
+	return min+"pt";
+}
+var SoundEnabled = navigator.plugins && navigator.plugins["LiveAudio"];
+function restore() {
+	self.location.reload();
+}
+function set_size() {
+	document.SlideLayer.width = window.innerWidth;
+	document.SlideLayer.height = window.innerHeight;
+}
+document.captureEvents(Event.MOUSEDOWN);
+document.captureEvents(Event.KEYPRESS);
+document.onkeypress = _KPH ;
+document.onmousedown = _KPH ;
+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0035.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
+bgcolor="#000000">
+<script>
+
+g_origHeight = 566;
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+
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+else
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+	
+g_top = (window.innerHeight - g_height) / 2;
+g_left = (window.innerWidth - g_width) / 2;
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+function new_font_size() {
+	var size = 11 * g_width / g_origWidth;
+	if ( size < 1 ) size = 1;
+	return size+"pt";
+}
+</script>
+<div id=SlideObj class=sld style='position:relative;font-size:&{new_font_size()};'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 1 * g_height; mywidth = 1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.gif" height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.09 * g_height; myleft = 0.09 * g_width; myheight = 0.87 * g_height; mywidth = 0.59 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.09 * g_width;
+yy = 0.09 * g_height;
+ht = 0.87 * g_height;
+wd = 0.59 * g_width;
+document.write(
+'<img border=0 src="slide0003_image005.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.72 * g_height; myleft = 0.14 * g_width; myheight = 0.06 * g_height; mywidth = 0.62 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.14 * g_width;
+yy = 0.72 * g_height;
+ht = 0.06 * g_height;
+wd = 0.62 * g_width;
+document.write(
+'<img border=0 src="slide0003_image006.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.68 * g_height; myleft = 0.78 * g_width; myheight = 0.17 * g_height; mywidth = 0.21 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><span style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;
+mso-color-index:3'>highlight<br>
+</span></div>
+</layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.21 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><span style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;
+mso-color-index:3'><i>amyloid beta<br>
+</i></span></div>
+</layer><script>
+	mytop = 0.11 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><span style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;
+mso-color-index:3'>then click</span><span style='font-family:"Gill Sans";
+font-size:250%;color:#E9EB5D;mso-color-index:3;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = -0.04 * g_height; myleft = 0.07 * g_width; myheight = 0.18 * g_height; mywidth = 0.84 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.04 * g_height; myleft = 0.01 * g_width; myheight = 0.08 * g_height; mywidth = 0.82 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%'><span style='font-size:91%'>Search results</span><span
+style='mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>If all goes well, you
+   will see a version of this window. WebQTL will display up to about 100 hits.
+   If a search generates larger numbers of hits then you will need to refine
+   your search terms.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0036.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0036.htm
new file mode 100755
index 00000000..ae7843aa
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0036.htm
@@ -0,0 +1,122 @@
+<html>
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+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jun-19-03>
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+</script>
+<div><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:nobullet;text-align:left;font-family:"Gill Sans";
+font-weight:normal;font-style:normal;text-decoration:none;text-shadow:none;
+text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;
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+mso-text-indent-alt:56'><span style='mso-special-format:nobullet;display:none;
+color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>First page of data: The
+�Trait Data Form�</span></div>
+</layer></div>
+</layer><script>
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+//-->
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+</layer><script>
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+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><span style='font-size:200%;color:#E9EB5D'><i>Click here<br>
+</i></span></div>
+</layer><script>
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+</script>
+<div><span style='font-size:200%;color:#E9EB5D'><i>to learn<br>
+</i></span></div>
+</layer><script>
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+</script>
+<div><span style='font-size:200%;color:#E9EB5D'><i>about<br>
+</i></span></div>
+</layer><script>
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+</script>
+<div><span style='font-size:200%;color:#E9EB5D'><i>data<br>
+</i></span></div>
+</layer><script>
+	mytop = 0.21 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.16 * g_width;
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+</script>
+<div><span style='font-size:200%;color:#E9EB5D'><i>source</i></span></div>
+</layer></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>The Trait Data and
+   Editing Form is the single more important page from the point of view of
+   working with WebQTL data. Please read the text carefully. Explore the links,
+   but do not close this page. We will need it many more times in this
+   demonstration.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0037.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0037.htm
new file mode 100755
index 00000000..bb776db5
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0037.htm
@@ -0,0 +1,93 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jun-19-03>
+<style media=print>
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+	height:4.5in !important;
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+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
+		min = window.innerHeight/20;
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+}
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+document.onkeypress = _KPH ;
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+</script><script language=JavaScript><!--
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+}//-->
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+document.write(
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+</layer><script>
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+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.94 * g_width;
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+<div style='mso-special-format:nobullet;text-align:left;font-family:"Gill Sans";
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+mso-text-indent-alt:56'><span style='mso-special-format:nobullet;display:none;
+color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>Data sources: Phenotpyes
+and genotypes</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.1 * g_height; myleft = 0.07 * g_width; myheight = 0.88 * g_height; mywidth = 0.84 * g_width;
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+</script>
+<div><script language=JavaScript><!--
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+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>There are already five
+   databases in WebQTL. Each will eventually have a page like this describing
+   the data source and appropriate citations to these databases. The great
+   majority of data in WebQTL were generated in our own labs and those of our
+   collaborators.<span style="mso-spacerun: yes">&nbsp; </span>We welcome you
+   to use these data, but caution you that there are inevitably lots of little
+   problems and issues that may compromise some results. Be cautious and
+   skeptical. Ask us questions before you leap to publication. And please, if
+   you find the data useful or can verify or refute data, LET US KNOW. We would
+   like to add you to our reference section and add links to improvements.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0038.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0038.htm
new file mode 100755
index 00000000..b3e613ca
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0038.htm
@@ -0,0 +1,119 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jun-19-03>
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
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+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
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+}
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+color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:81%;color:#E9EB5D;mso-color-index:3'>Return to Trait Data page
+</span></div>
+</layer></div>
+</layer><script>
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+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.05 * g_height; mywidth = 0.4 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:nobullet;text-align:left;font-family:"Gill Sans";
+font-weight:normal;font-style:normal;text-decoration:none;text-shadow:none;
+text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;
+font-size:213%;mso-text-raise:0%;mso-line-spacing:" 0 ";mso-margin-left-alt:
+348;mso-text-indent-alt:56;mso-line-spacing:" 0 ";mso-margin-left-alt:348;
+mso-text-indent-alt:56'><span style='mso-special-format:nobullet;display:none;
+color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:81%;color:#E9EB5D;mso-color-index:3'>bottom of this page</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.86 * g_height; myleft = 0.03 * g_width; myheight = 0.11 * g_height; mywidth = 1.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 1.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:217%;
+color:#E9EB5D;mso-color-index:3'>Trait data for each strain with SE when known.
+For array data </span></span></layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 1.08 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:217%;
+color:#E9EB5D;mso-color-index:3'>the scale is ~ log base 2.<span
+style="mso-spacerun: yes">&nbsp;&nbsp; </span></span><span style='font-size:
+183%;color:#E9EB5D;mso-color-index:3'>F1=13.752 = 2^13.752 = 13796 </span><span
+style='font-family:"Gill Sans";font-size:183%;color:#E9EB5D;mso-color-index:
+3;mso-special-format:lastCR;display:none'><br>
+</span></span></layer></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>This<span
+   style="mso-spacerun: yes">&nbsp; </span>slide shows you the<span
+   style="mso-spacerun: yes">&nbsp; </span>lower parts of the Trait Data Page.
+   We expect to make many small modification of this page, so do not be
+   surprised if some elements have been moved around.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0039.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0039.htm
new file mode 100755
index 00000000..0b96295c
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0039.htm
@@ -0,0 +1,104 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jun-19-03>
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
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+-->
+</style>
+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
+		min = window.innerHeight/20;
+		
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+}
+var SoundEnabled = navigator.plugins && navigator.plugins["LiveAudio"];
+function restore() {
+	self.location.reload();
+}
+function set_size() {
+	document.SlideLayer.width = window.innerWidth;
+	document.SlideLayer.height = window.innerHeight;
+}
+document.captureEvents(Event.MOUSEDOWN);
+document.captureEvents(Event.KEYPRESS);
+document.onkeypress = _KPH ;
+document.onmousedown = _KPH ;
+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
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+ LoadNavSld("slide0039.htm");
+}//-->
+</script>
+</head>
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+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.gif" height=' + ht + ' width=' + wd + '>' );
+//-->
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+</layer><script>
+	mytop = 0.01 * g_height; myleft = 0.03 * g_width; myheight = 0.14 * g_height; mywidth = 0.93 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.91 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:nobullet;text-align:left;font-family:"Gill Sans";
+font-weight:normal;font-style:normal;text-decoration:none;text-shadow:none;
+text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;
+font-size:213%;mso-text-raise:0%;mso-line-spacing:" 0 ";mso-margin-left-alt:
+348;mso-text-indent-alt:56;mso-line-spacing:" 0 ";mso-margin-left-alt:348;
+mso-text-indent-alt:56'><span style='mso-special-format:nobullet;display:none;
+color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>Discovering shared
+expression patterns</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.16 * g_height; myleft = 0.05 * g_width; myheight = 0.55 * g_height; mywidth = 0.86 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.05 * g_width;
+yy = 0.16 * g_height;
+ht = 0.55 * g_height;
+wd = 0.86 * g_width;
+document.write(
+'<img border=0 src="slide0007_image012.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.6 * g_height; myleft = 0.45 * g_width; myheight = 0.14 * g_height; mywidth = 0.13 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.45 * g_width;
+yy = 0.6 * g_height;
+ht = 0.14 * g_height;
+wd = 0.13 * g_width;
+document.write(
+'<img border=0 src="slide0007_image013.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Finally, we can now
+   start an analysis.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>We ask a simple
+   question:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Do differences in App
+   transcript expression correlate with those of any other transcripts in the
+   forebrain?</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0040.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0040.htm
new file mode 100755
index 00000000..a71d67b3
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0040.htm
@@ -0,0 +1,111 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jun-19-03>
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
+		min = window.innerHeight/20;
+		
+	return min+"pt";
+}
+var SoundEnabled = navigator.plugins && navigator.plugins["LiveAudio"];
+function restore() {
+	self.location.reload();
+}
+function set_size() {
+	document.SlideLayer.width = window.innerWidth;
+	document.SlideLayer.height = window.innerHeight;
+}
+document.captureEvents(Event.MOUSEDOWN);
+document.captureEvents(Event.KEYPRESS);
+document.onkeypress = _KPH ;
+document.onmousedown = _KPH ;
+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0040.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
+bgcolor="#000000">
+<script>
+
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+g_origWidth = 755;
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+g_height = window.innerHeight - 10;
+
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+g_left = 0;
+
+if ( g_width < ( g_origWidth * g_height /g_origHeight ) )
+	g_height = g_width * g_origHeight / g_origWidth;
+else
+	g_width = g_origWidth * g_height / g_origHeight;
+	
+g_top = (window.innerHeight - g_height) / 2;
+g_left = (window.innerWidth - g_width) / 2;
+
+document.write( '<layer id=SlideLayer BGCOLOR=#484848 background="" top=' + g_top + ' left=' + g_left + ' height=' + g_height + ' width=' + g_width + ' >' );
+document.SlideLayer.clip.top = 0;
+document.SlideLayer.clip.left = 0;
+document.SlideLayer.clip.height = g_height;
+document.SlideLayer.clip.width = g_width;
+function new_font_size() {
+	var size = 11 * g_width / g_origWidth;
+	if ( size < 1 ) size = 1;
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+}
+</script>
+<div id=SlideObj class=sld style='position:relative;font-size:&{new_font_size()};'><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.gif" height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.01 * g_height; myleft = 0.03 * g_width; myheight = 0.14 * g_height; mywidth = 0.93 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.9 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:nobullet;text-align:left;font-family:"Gill Sans";
+font-weight:normal;font-style:normal;text-decoration:none;text-shadow:none;
+text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;
+font-size:213%;mso-text-raise:0%;mso-line-spacing:" 0 ";mso-margin-left-alt:
+348;mso-text-indent-alt:56;mso-line-spacing:" 0 ";mso-margin-left-alt:348;
+mso-text-indent-alt:56'><span style='mso-special-format:nobullet;display:none;
+color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>The </span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'><i>App</i></span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'> transcript neighborhood</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.1 * g_height; myleft = 0.05 * g_width; myheight = 0.88 * g_height; mywidth = 0.66 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.05 * g_width;
+yy = 0.1 * g_height;
+ht = 0.88 * g_height;
+wd = 0.66 * g_width;
+document.write(
+'<img border=0 src="slide0008_image014.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.3 * g_height; myleft = 0.75 * g_width; myheight = 0.18 * g_height; mywidth = 0.26 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.24 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:150%;color:#E9EB5D;mso-color-index:
+3'><b>Question: </b></span><span style='font-size:133%;color:#E9EB5D;
+mso-color-index:3'><b>How </b></span></span></layer><script>
+	mytop = 0.04 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.25 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:133%;color:#E9EB5D;mso-color-index:
+3'><b>many transcripts </b></span></span></layer><script>
+	mytop = 0.07 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.26 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:133%;color:#E9EB5D;mso-color-index:
+3'><b>have correlations </b></span></span></layer><script>
+	mytop = 0.11 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.25 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:133%;color:#E9EB5D;mso-color-index:
+3'><b>&gt;0.7? What does </b></span></span></layer><script>
+	mytop = 0.14 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.22 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:133%;color:#E9EB5D;mso-color-index:
+3'><b>this imply.</b></span></span></layer></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>The answer is a strong
+   Yes. A very large number of transcripts have correlations above 0.7
+   (absolute value) with App mRNA. The precise number today is 208. But this
+   will change as we add more strains and arrays. In any case, this is a fairly
+   large number and all of these correlations are significant at alpha .05 even
+   when correcting for the enormous numbers<span style="mso-spacerun:
+   yes">&nbsp; </span>of tests (12422 tests).</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>What does this imply?</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>That there can be
+   massive codependence of expression variance among transcripts. App is NOT an
+   isolated instance. This is improtant biologically and statistically. From a
+   statistical perspective, we would like to know how many �independent� test
+   we effectively are performing when we use array data in this way. Are we
+   testing 12000 independent transcripts or just 1200 transcriptional �modules�
+   each with blurred boarders but each with about 10 effective members. There
+   is no answer yet, but we probaby have a large enough data set to begin to
+   answer this question.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0041.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0041.htm
new file mode 100755
index 00000000..df4bc799
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0041.htm
@@ -0,0 +1,93 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jun-19-03>
+<style media=print>
+<!--.sld
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+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.92 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:nobullet;text-align:left;font-family:"Gill Sans";
+font-weight:normal;font-style:normal;text-decoration:none;text-shadow:none;
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+mso-text-indent-alt:56'><span style='mso-special-format:nobullet;display:none;
+color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>Handdrawn sketch of the
+neighborhood</span></div>
+</layer></div>
+</layer><script>
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+</script>
+<div><script language=JavaScript><!--
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+//-->
+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Many of the data types
+   in the previous slide are hot-linked and it is easy to generate a small web
+   of correlations between any transcript of interest and many other
+   transcripts. In this case, we have used green lines between transcripts that
+   have positive correlations, and red lines between transcripts that have
+   negative correlations. Correlations have been multiplied by 100. The
+   correlation of 0.96 between App and Hsp84-1 reads 96.<span
+   style="mso-spacerun: yes">&nbsp; </span>These are Pearson product moment
+   correlations and they are sensitive to outliers. If you prefer, you can
+   recompute Spearman rank order correlations.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Where did Ndr4 (lower
+   left) come from? It is not in the list in the previous slide. Actually it
+   is. Nomenclature changes rapidly. If you click on R74996 in the previous
+   slide (the active webqtl version) you will see that it now has a new symbol
+   and name.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>What are all of
+   the<span style="mso-spacerun: yes">&nbsp; </span>conventions in this
+   correlation network sketch.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Times size=3>1.</font><font
+   face=Helvetica size=3>The official gene symbol = App</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>2. OUr estimate of the
+   location of these gene in the Mouse Genome Sequencing Consoritum version 3
+   build (MGSCv3). Chromosome followed by the megabase position relative to the
+   centromere. (Mice only have one chromosome arm so this is an unambiguous
+   coordinate. )</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>3. The pair of numbers:
+   top is the highest expression among the strain set. The lower number is the
+   lowest expression of that transcript among the strain set.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>4. Vertical number on
+   the right side of each box: this is the probe set ID given by Affymetrix. We
+   have truncated these probe set IDs so you will not see the usual<span
+   style="mso-spacerun: yes">&nbsp; </span>�at�. A single gene may be
+   represented by more than 10 probe sets. Thus this ID number is essential to
+   identify the actual data source.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>5. Lower right corner:
+   a two digit number followed by plus and minus signs. These numbers are the
+   correlation value (absolute value) of the 100th best correlated transcript.
+   The plus and minus signs indicate the mean polarity of the correlations.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>6. The set of numbers
+   that read 2@140* etc. These are the approximate locations of additive effect
+   QTLs detected by WebQTL that we will describe in other slides. Read this as:
+   App has a suggestive QTL on Chr 2 at about 140 Mb and the D allele inherited
+   from DBA/2J confirms a higher expression level at this marker.<span
+   style="mso-spacerun: yes">&nbsp; </span>If there is no star symbol, then it
+   is not even formally �suggestive� but does make an interesting looking blip
+   on the QTL radar screen.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0042.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0042.htm
new file mode 100755
index 00000000..9cc37896
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0042.htm
@@ -0,0 +1,102 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jun-19-03>
+<style media=print>
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+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
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+	return min+"pt";
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+function restore() {
+	self.location.reload();
+}
+function set_size() {
+	document.SlideLayer.width = window.innerWidth;
+	document.SlideLayer.height = window.innerHeight;
+}
+document.captureEvents(Event.MOUSEDOWN);
+document.captureEvents(Event.KEYPRESS);
+document.onkeypress = _KPH ;
+document.onmousedown = _KPH ;
+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0042.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
+bgcolor="#000000">
+<script>
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+<div><script language=JavaScript><!--
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+<div><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:nobullet;text-align:left;font-family:"Gill Sans";
+font-weight:normal;font-style:normal;text-decoration:none;text-shadow:none;
+text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;
+font-size:213%;mso-text-raise:0%;mso-line-spacing:" 0 ";mso-margin-left-alt:
+348;mso-text-indent-alt:56;mso-line-spacing:" 0 ";mso-margin-left-alt:348;
+mso-text-indent-alt:56'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 1.05 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='mso-special-format:nobullet;display:none;
+color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>What a network is likely
+to look like (but </span><span style='font-size:106%;color:#E9EB5D;mso-color-index:
+3'><i>App</i></span><span style='font-size:106%;color:#E9EB5D;mso-color-index:
+3'> </span></span></layer><script>
+	mytop = 0.04 * g_height; myleft = 0.05 * g_width; myheight = 0.07 * g_height; mywidth = 0.85 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:106%;color:#E9EB5D;mso-color-index:
+3'>will not be center of universe).</span></span></layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.15 * g_height; myleft = 0.06 * g_width; myheight = 0.82 * g_height; mywidth = 0.71 * g_width;
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+</script>
+<div><script language=JavaScript><!--
+xx = 0.06 * g_width;
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+'<img border=0 src="slide0010_image016.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.32 * g_height; myleft = 0.45 * g_width; myheight = 0.03 * g_height; mywidth = 0.05 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><span style='font-size:133%;color:#FF0F0F'><b><i>App</i></b></span></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>What networks are
+   likely to really look like. This slide is taken from Lumeta Inc.<span
+   style="mso-spacerun: yes">&nbsp; </span>(www.lumeta.com). It actually
+   illustrates the structure of connections across the<span
+   style="mso-spacerun: yes">&nbsp; </span>Internet. The large green area is a
+   major Internet provider (WorldCom before the fall?).<span
+   style="mso-spacerun: yes">&nbsp; </span>Check<span style="mso-spacerun:
+   yes">&nbsp; </span>out Lumeta to see some more lovely graphs of this sort.
+   Most biologists are familiar with simple sketches, but this is what we will
+   have to be prepared to contend with soon.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0043.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0043.htm
new file mode 100755
index 00000000..e0be795e
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0043.htm
@@ -0,0 +1,112 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Jun-19-03: Are there experimental results to corroborate a link between App with Hsp84-1?">
+<style media=print>
+<!--.sld
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+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
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+}
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+}
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+}
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+function DoOnLoad() { 
+ LoadNavSld("slide0043.htm");
+}//-->
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+</head>
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+g_left = (window.innerWidth - g_width) / 2;
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+document.SlideLayer.clip.left = 0;
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+<div><script language=JavaScript><!--
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+wd =   g_width;
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+</layer><script>
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+</script>
+<div><script>
+	mytop = 0.03 * g_height; myleft = 0 * g_width; myheight = 0.12 * g_height; mywidth = 0.96 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:" 0 &#1;";mso-margin-left-alt:232;
+mso-text-indent-alt:0;mso-line-spacing:" 0 &#1;";mso-margin-left-alt:232;
+mso-text-indent-alt:0'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.96 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:68%'><i>Are there experimental
+results to corroborate a link </i></span></span></layer><script>
+	mytop = 0.06 * g_height; myleft = 0.04 * g_width; myheight = 0.06 * g_height; mywidth = 0.87 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:68%'><i>between App with
+Hsp84-1?</i></span></span></layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.82 * g_height; myleft = 0.04 * g_width; myheight = 0.18 * g_height; mywidth = 0.96 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div></div>
+</layer><script>
+	mytop = 0.29 * g_height; myleft = 0.04 * g_width; myheight = 0.13 * g_height; mywidth = 0.99 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.99 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:250%;
+color:#E9EB5D'><i>Yes: Heat shock 84-1 induces the expression of App, </i></span></span></layer><script>
+	mytop = 0.06 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.84 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:250%;
+color:#E9EB5D'><i>ubiquitin, and pyruvate kinase</i></span></span></layer></div>
+</layer><script>
+	mytop = 0.5 * g_height; myleft = 0.05 * g_width; myheight = 0.19 * g_height; mywidth = 0.95 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.95 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:250%;
+color:#E9EB5D'><i>Having �confirmed� these known relations, we can </i></span></span></layer><script>
+	mytop = 0.06 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.94 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:250%;
+color:#E9EB5D'><i>now add new members to this family: Atp6l, Gnas, </i></span></span></layer><script>
+	mytop = 0.13 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.84 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:250%;
+color:#E9EB5D'><i>Ndr4. A thin veneer of functional genomics.</i></span></span></layer></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Having worked with
+   WebQTL now for 30 minutes, do we know anything new? The hypothesis that we
+   have generated (but not validated) is that three transcripts: Atp6l, Gnas,
+   and Ndr4 are part of a family of genes that are coregulated in normal mouse
+   forebrain with App and Hsp84-1. We need to add functional and mechanistic
+   significance to this hypothesis to make it biologically vibrant. But from a
+   statiistical standpoint it is a strong inference.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Please don�t say: But
+   these are mere correlations. A high correlation in this context has a
+   biological basis. The real question is are we smart enough to understand the
+   web (not chain) of causality that produced the correlation. Once we
+   understand the web of causality, does it have utility? Very often the answer
+   will be NO. This will often be the case when a high correlation is generated
+   by linkage disequilibrium of sets of polymorphisms that modulate a set of
+   mechanistically separated traits. Chromosomal linkage can produce
+   correlations that are not mechanistic in the conventional sense used by
+   molecular biologists. For example, clusters<span style="mso-spacerun:
+   yes">&nbsp; </span>of hox transcription factor genes tend to be close
+   physically to keratin gene clusters, and one might expect shared patterns of
+   variance produced by this linkage in a mapping panel, no matter how large.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>If Affymetrix designed
+   probe sets with reasonable care, if we did the experiments correctly, if we
+   sampled animals appropriately, then a correlation of 0.70 or higher between
+   transcripts in the brain tells you that these two transcripts are
+   effectively coupled in this set of animals under this set of conditions.
+   More than 50% the variance in the expression of one transcript can be
+   predicted from the other. That is a major piece of information that could be
+   of significant clinical, economic, and predictive value, whatever its
+   causes. Yes, correlation coefficients are noisy and have large error terms,
+   but we have larger n of strains coming to the rescue. Expect more than 50
+   BXD lines soon.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>This is a thin veneer
+   of functional genomics. It is enough to generate some marvelous hypotheses
+   in a semi-automated way.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0044.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0044.htm
new file mode 100755
index 00000000..06443316
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0044.htm
@@ -0,0 +1,107 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jun-19-03>
+<style media=print>
+<!--.sld
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+</layer><script>
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+<div><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:nobullet;text-align:left;font-family:"Gill Sans";
+font-weight:normal;font-style:normal;text-decoration:none;text-shadow:none;
+text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;
+font-size:213%;mso-text-raise:0%;mso-line-spacing:" 0 ";mso-margin-left-alt:
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+mso-text-indent-alt:0'><span style='mso-special-format:nobullet;display:none;
+color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>2.45 billion scatter
+plots: </span><span style='font-size:94%;color:#E9EB5D;mso-color-index:3'>here
+is one of the best</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.11 * g_height; myleft = 0.06 * g_width; myheight = 0.82 * g_height; mywidth = 0.67 * g_width;
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+</script>
+<div><script language=JavaScript><!--
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+//-->
+</script></div>
+</layer><script>
+	mytop = 0.77 * g_height; myleft = 0.41 * g_width; myheight = 0.07 * g_height; mywidth = 0.08 * g_width;
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+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><span style='font-family:"Gill Sans";font-size:283%;
+color:#003399;mso-color-index:4'><i>App</i></span><span style='font-family:
+"Gill Sans";font-size:283%;color:#E9EB5D;mso-color-index:3;mso-special-format:
+lastCR;display:none'><i><br>
+</i></span></div>
+</layer><script>
+	mytop = 0.36 * g_height; myleft = 0.14 * g_width; myheight = 0.27 * g_height; mywidth = 0.06 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
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+//-->
+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>The correlation between
+   App and heat shock protein 84-1 transcript is most impressive.<span
+   style="mso-spacerun: yes">&nbsp; </span>Since WebQTL now contains total of
+   about 70,000 traits in the BXD strains, we could produce as many as to 70k x
+   35k scatter plots of this type. Since all of the<span style="mso-spacerun:
+   yes">&nbsp; </span>correlations come for a common reference population,
+   none<span style="mso-spacerun: yes">&nbsp; </span>of the correlations are
+   blantantly silly. However the great majority may be uninterpretable and a
+   very large number may be meaningless given the signal-to-noise ratios of
+   some measurements. With about 30 strains, correlations above 0.7 have a
+   reasonably low false positive rate.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0045.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0045.htm
new file mode 100755
index 00000000..d3c4b2af
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0045.htm
@@ -0,0 +1,104 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jun-19-03>
+<style media=print>
+<!--.sld
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+<script language=JavaScript>
+function font_size() {
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+</script><script language=JavaScript><!--
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+}//-->
+</script>
+</head>
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+<div><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
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+<div style='mso-special-format:nobullet;text-align:left;font-family:"Gill Sans";
+font-weight:normal;font-style:normal;text-decoration:none;text-shadow:none;
+text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;
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+mso-text-indent-alt:56'><span style='mso-special-format:nobullet;display:none;
+color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>Cross-tissue type
+correlations</span></div>
+</layer></div>
+</layer><script>
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+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>We can compare App
+   expression inthe forebrain against transcript expression in hematopoietic
+   stem cells. Some of these correlations are significant, but it may be
+   difficult to discovery of shared genetic (linkage disequilibrium) or
+   molecular processes that give rise to these correlation.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>The GNF Hematopoietic
+   stem cell data belong to Gerald de Haan (University of Groningen) and
+   Michael Cooke (Genomics Institute of the Novartis Research Foundation).</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0046.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0046.htm
new file mode 100755
index 00000000..77bd0a8b
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0046.htm
@@ -0,0 +1,110 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jun-19-03>
+<style media=print>
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+<script language=JavaScript>
+function font_size() {
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+	if ( min > window.innerHeight/20 )
+		min = window.innerHeight/20;
+		
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+function restore() {
+	self.location.reload();
+}
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+document.captureEvents(Event.KEYPRESS);
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+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0046.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
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+<div><script>
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+<div style='mso-special-format:nobullet;text-align:left;font-family:"Gill Sans";
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+text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;
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+mso-text-indent-alt:56'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 1.05 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='mso-special-format:nobullet;display:none;
+color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>Cross-modal
+correlations: From mRNA to to </span></span></layer><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:106%;color:#E9EB5D;mso-color-index:
+3'>anatomy and to behavior and pharmacology</span></span></layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.15 * g_height; myleft = 0.06 * g_width; myheight = 0.34 * g_height; mywidth = 0.53 * g_width;
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+</script>
+<div><script language=JavaScript><!--
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+//-->
+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Another example, but in
+   this case we are generating correlations between variation in transcript
+   levels with a database of approximately 430 published (and unpublished)
+   phenotypes from BXD strains. Notice that the N of strains is variable (from
+   21 to 28 above). Rank order statistics is more appropriate when N is under
+   30.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>The Published
+   Phenotypes database was prepared by Elissa Chesler and Robert Williams from
+   data extracted from the literature or sent to us for inclusion by our
+   colleagues. We especially thank John Crabbe (Oregon HSU) and Byron Jones
+   (Pennsylvania SU) for providing us with large pre-compiled data tables.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0047.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0047.htm
new file mode 100755
index 00000000..9f73a171
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0047.htm
@@ -0,0 +1,155 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Jun-19-03: WebQTL     link to  www.webqtl.org/search.html">
+<style media=print>
+<!--.sld
+	{left:0px !important;
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+-->
+</style>
+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
+		min = window.innerHeight/20;
+		
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+}
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+}
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+}
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+document.captureEvents(Event.KEYPRESS);
+document.onkeypress = _KPH ;
+document.onmousedown = _KPH ;
+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0047.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
+bgcolor="#000000">
+<script>
+
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+g_origWidth = 755;
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+g_height = window.innerHeight - 10;
+
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+g_left = 0;
+
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+	g_height = g_width * g_origHeight / g_origWidth;
+else
+	g_width = g_origWidth * g_height / g_origHeight;
+	
+g_top = (window.innerHeight - g_height) / 2;
+g_left = (window.innerWidth - g_width) / 2;
+
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+document.SlideLayer.clip.left = 0;
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+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.gif" height=' + ht + ' width=' + wd + '>' );
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+</layer><script>
+	mytop = 0.03 * g_height; myleft = 0.02 * g_width; myheight = 0.19 * g_height; mywidth = 0.96 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.19 * g_height; mywidth = 0.93 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:" 0 &#1;";mso-margin-left-alt:232;
+mso-text-indent-alt:0;mso-line-spacing:" 0 &#1;";mso-margin-left-alt:232;
+mso-text-indent-alt:0'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.93 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:68%'><i>WebQTL<span
+style="mso-spacerun: yes">&nbsp;&nbsp;&nbsp; </span><br>
+</i></span></span></layer><script>
+	mytop = 0.06 * g_height; myleft = 0.04 * g_width; myheight = 0.06 * g_height; mywidth = 0.89 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:68%'><i>link to <br>
+</i></span></span></layer><script>
+	mytop = 0.11 * g_height; myleft = 0.04 * g_width; myheight = 0.08 * g_height; mywidth = 0.89 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:86%'><i>www.webqtl.org/search.html</i></span><span
+style='font-size:68%;mso-special-format:lastCR;display:none'><i><br>
+</i></span></span></layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.36 * g_height; myleft = 0.02 * g_width; myheight = 0.45 * g_height; mywidth = 0.73 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
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+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.36 * g_height; mywidth = 0.71 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;font-size:213%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.11 * g_height; mywidth = 0.67 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 ";mso-margin-left-alt:348;mso-text-indent-alt:
+56'><script>
+	mytop = 0 * g_height; myleft = 0.05 * g_width; myheight = 0.06 * g_height; mywidth = 0.62 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:94%;color:#E9EB5D;mso-color-index:
+3'><span style='mso-special-format:numbullet;color:#FBFDB8;position:absolute;
+left:-8.06%;font-family:Times;font-size:99%'>1.</span></span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3'>Discovering shared
+expression </span></span></layer><script>
+	mytop = 0.05 * g_height; myleft = 0.05 * g_width; myheight = 0.06 * g_height; mywidth = 0.55 * g_width;
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+</script><span
+style='text-align:left'><span style='font-size:94%;color:#E9EB5D;mso-color-index:
+3'>patterns<br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.15 * g_height; myleft = 0 * g_width; myheight = 0.11 * g_height; mywidth = 0.6 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 ";mso-margin-left-alt:348;mso-text-indent-alt:
+56'><script>
+	mytop = 0 * g_height; myleft = 0.05 * g_width; myheight = 0.06 * g_height; mywidth = 0.55 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:94%;color:#E9EB5D;mso-color-index:
+3'><span style='mso-special-format:numbullet;color:#FBFDB8;position:absolute;
+left:-9.09%;font-family:Times;font-size:99%'>2.</span></span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3'>Discovering upstream </span></span></layer><script>
+	mytop = 0.05 * g_height; myleft = 0.05 * g_width; myheight = 0.06 * g_height; mywidth = 0.55 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:94%;color:#E9EB5D;mso-color-index:
+3'>modulators (QTLs)<br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.3 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.71 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 &#1;";mso-margin-left-alt:348;mso-text-indent-alt:
+56'><script>
+	mytop = 0 * g_height; myleft = 0.05 * g_width; myheight = 0.06 * g_height; mywidth = 0.66 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:94%;color:#E9EB5D;mso-color-index:
+3'><span style='mso-special-format:numbullet;color:#FBFDB8;position:absolute;
+left:-7.61%;font-family:Times;font-size:99%'>3.</span></span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3'>Discovering downstream
+targets</span></span></layer></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.17 * g_height; myleft = 0.74 * g_width; myheight = 0.64 * g_height; mywidth = 0.23 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.74 * g_width;
+yy = 0.17 * g_height;
+ht = 0.64 * g_height;
+wd = 0.23 * g_width;
+document.write(
+'<img border=0 src="slide0015_image023.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.75 * g_height; myleft = 0.74 * g_width; myheight = 0.14 * g_height; mywidth = 0.1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:"Arial Rounded MT Bold";font-size:233%;color:#6E6E6E'>RNA</span><span
+style='font-family:"Arial Rounded MT Bold";font-size:300%;color:#6E6E6E;
+display:none'><br>
+</span></div>
+</layer><script>
+	mytop = 0.06 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.08 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:"Arial Rounded MT Bold";font-size:300%;color:#6E6E6E;
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+</span></div>
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+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Part 2: Mapping
+   upstream modulators or QTLs. A quantitative trait locus is a chromosomal
+   region that harbors one or a few polymorphic gene loci that influence a
+   trait. We are going to be looking for QTLs that modulate the steady state
+   expression level of App in the adult mouse forebrain.</font><br>
+   </td>
+  </tr>
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+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0048.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0048.htm
new file mode 100755
index 00000000..53a7011d
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+</layer></div>
+</layer><script>
+	mytop = 0.39 * g_height; myleft = 0.22 * g_width; myheight = 0.11 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.22 * g_width;
+yy = 0.39 * g_height;
+ht = 0.11 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0016_image034.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.39 * g_height; myleft = 0.38 * g_width; myheight = 0.11 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.38 * g_width;
+yy = 0.39 * g_height;
+ht = 0.11 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0016_image035.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.39 * g_height; myleft = 0.55 * g_width; myheight = 0.11 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.55 * g_width;
+yy = 0.39 * g_height;
+ht = 0.11 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0016_image036.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.39 * g_height; myleft = 0.72 * g_width; myheight = 0.11 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.72 * g_width;
+yy = 0.39 * g_height;
+ht = 0.11 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0016_image037.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.43 * g_height; myleft = 0.43 * g_width; myheight = 0.03 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.43 * g_width;
+yy = 0.43 * g_height;
+ht = 0.03 * g_height;
+wd = 0.11 * g_width;
+document.write(
+'<img border=0 src="slide0016_image038.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.6 * g_height; myleft = 0.2 * g_width; myheight = 0.03 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.2 * g_width;
+yy = 0.6 * g_height;
+ht = 0.03 * g_height;
+wd = 0.09 * g_width;
+document.write(
+'<img border=0 src="slide0016_image039.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.71 * g_height; myleft = 0.58 * g_width; myheight = 0.27 * g_height; mywidth = 0.2 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.03 * g_height; myleft = 0.01 * g_width; myheight = 0.22 * g_height; mywidth = 0.17 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.15 * g_height; mywidth = 0.17 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:" 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.17 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:center'><span style='font-family:Arial;font-size:117%;
+color:#FFFF99'><b>20 generations </b></span></span></layer><script>
+	mytop = 0.06 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.17 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:center'><span style='font-family:Arial;font-size:117%;
+color:#FFFF99'><b>brother-sister </b></span></span></layer><script>
+	mytop = 0.12 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.17 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:center'><span style='font-family:Arial;font-size:117%;
+color:#FFFF99'><b>matings</b></span><span style='font-family:Arial;font-size:
+233%;color:#FFFF99;display:none'><b><br>
+</b></span></span></layer></div>
+</layer><script>
+	mytop = 0.16 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.17 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:" 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17'><span style='font-family:Arial;font-size:233%;
+color:#FFFF99;mso-special-format:lastCR;display:none'><b><br>
+</b></span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.6 * g_height; myleft = 0.5 * g_width; myheight = 0.03 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.5 * g_width;
+yy = 0.6 * g_height;
+ht = 0.03 * g_height;
+wd = 0.09 * g_width;
+document.write(
+'<img border=0 src="slide0016_image040.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.62 * g_height; myleft = 0.54 * g_width; myheight = 0.28 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.54 * g_width;
+yy = 0.62 * g_height;
+ht = 0.28 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0016_image041.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.61 * g_height; myleft = 0.79 * g_width; myheight = 0.03 * g_height; mywidth = 0.1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.79 * g_width;
+yy = 0.61 * g_height;
+ht = 0.03 * g_height;
+wd = 0.1 * g_width;
+document.write(
+'<img border=0 src="slide0016_image042.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.62 * g_height; myleft = 0.83 * g_width; myheight = 0.28 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.83 * g_width;
+yy = 0.62 * g_height;
+ht = 0.28 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0016_image043.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.92 * g_height; myleft = 0.21 * g_width; myheight = 0.1 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.07 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.07 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:150%;color:#FFFF99'>BXD1</span><span
+style='font-family:Arial;font-size:150%;color:#484848;display:none'><br>
+</span></div>
+</layer><script>
+	mytop = 0.04 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.06 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:150%;color:#484848;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.92 * g_height; myleft = 0.51 * g_width; myheight = 0.1 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.07 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.07 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:150%;color:#FFFF99'>BXD2<br>
+</span></div>
+</layer><script>
+	mytop = 0.04 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.06 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:150%;color:#FFFF99;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.92 * g_height; myleft = 0.8 * g_width; myheight = 0.06 * g_height; mywidth = 0.1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.03 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'>BXD80</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.9 * g_height; myleft = 0.64 * g_width; myheight = 0.17 * g_height; mywidth = 0.17 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0.01 * g_width; myheight = 0.15 * g_height; mywidth = 0.16 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.16 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:300%;color:#FFFF99'>+ � +<br>
+</span></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.13 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:300%;color:#FFFF99;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.62 * g_height; myleft = 0.04 * g_width; myheight = 0.12 * g_height; mywidth = 0.06 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.1 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:200%;color:#FFFF99'><b>F2<br>
+</b></span></div>
+</layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:200%;color:#FFFF99;mso-special-format:
+lastCR;display:none'><b><br>
+</b></span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.54 * g_height; myleft = 0.18 * g_width; myheight = 0.01 * g_height; mywidth = 0.75 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.18 * g_width;
+yy = 0.54 * g_height;
+ht = 0.01 * g_height;
+wd = 0.75 * g_width;
+document.write(
+'<img border=0 src="slide0016_image044.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.54 * g_height; myleft = 0.17 * g_width; myheight = 0.03 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.17 * g_width;
+yy = 0.54 * g_height;
+ht = 0.03 * g_height;
+wd = 0 * g_width;
+document.write(
+'<img border=0 src="slide0016_image045.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.54 * g_height; myleft = 0.32 * g_width; myheight = 0.03 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.32 * g_width;
+yy = 0.54 * g_height;
+ht = 0.03 * g_height;
+wd = 0 * g_width;
+document.write(
+'<img border=0 src="slide0016_image046.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.54 * g_height; myleft = 0.48 * g_width; myheight = 0.04 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.48 * g_width;
+yy = 0.54 * g_height;
+ht = 0.04 * g_height;
+wd = 0 * g_width;
+document.write(
+'<img border=0 src="slide0016_image047.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.54 * g_height; myleft = 0.62 * g_width; myheight = 0.04 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.62 * g_width;
+yy = 0.54 * g_height;
+ht = 0.04 * g_height;
+wd = 0 * g_width;
+document.write(
+'<img border=0 src="slide0016_image048.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.54 * g_height; myleft = 0.77 * g_width; myheight = 0.04 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.77 * g_width;
+yy = 0.54 * g_height;
+ht = 0.04 * g_height;
+wd = 0 * g_width;
+document.write(
+'<img border=0 src="slide0016_image049.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.54 * g_height; myleft = 0.92 * g_width; myheight = 0.03 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.92 * g_width;
+yy = 0.54 * g_height;
+ht = 0.03 * g_height;
+wd = 0 * g_width;
+document.write(
+'<img border=0 src="slide0016_image050.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.44 * g_height; myleft = 0.49 * g_width; myheight = 0.1 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.49 * g_width;
+yy = 0.44 * g_height;
+ht = 0.1 * g_height;
+wd = 0 * g_width;
+document.write(
+'<img border=0 src="slide0016_image051.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.57 * g_height; myleft = 0.15 * g_width; myheight = 0.11 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.15 * g_width;
+yy = 0.57 * g_height;
+ht = 0.11 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0016_image052.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.57 * g_height; myleft = 0.3 * g_width; myheight = 0.11 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.3 * g_width;
+yy = 0.57 * g_height;
+ht = 0.11 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0016_image053.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.57 * g_height; myleft = 0.46 * g_width; myheight = 0.11 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.46 * g_width;
+yy = 0.57 * g_height;
+ht = 0.11 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0016_image054.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.57 * g_height; myleft = 0.6 * g_width; myheight = 0.11 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.6 * g_width;
+yy = 0.57 * g_height;
+ht = 0.11 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0016_image055.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.57 * g_height; myleft = 0.75 * g_width; myheight = 0.11 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.75 * g_width;
+yy = 0.57 * g_height;
+ht = 0.11 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0016_image056.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.57 * g_height; myleft = 0.9 * g_width; myheight = 0.11 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.9 * g_width;
+yy = 0.57 * g_height;
+ht = 0.11 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0016_image057.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.84 * g_height; myleft = 0.56 * g_width; myheight = 0.01 * g_height; mywidth = 0.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.56 * g_width;
+yy = 0.84 * g_height;
+ht = 0.01 * g_height;
+wd = 0.01 * g_width;
+document.write(
+'<img border=0 src="slide0016_image058.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.8 * g_height; myleft = 0.25 * g_width; myheight = 0.11 * g_height; mywidth = 0.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.25 * g_width;
+yy = 0.8 * g_height;
+ht = 0.11 * g_height;
+wd = 0.01 * g_width;
+document.write(
+'<img border=0 src="slide0016_image059.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.84 * g_height; myleft = 0.86 * g_width; myheight = 0.02 * g_height; mywidth = 0.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.86 * g_width;
+yy = 0.84 * g_height;
+ht = 0.02 * g_height;
+wd = 0.01 * g_width;
+document.write(
+'<img border=0 src="slide0016_image060.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.75 * g_height; myleft = 0.01 * g_width; myheight = 0.14 * g_height; mywidth = 0.14 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0 * g_width; myheight = 0.11 * g_height; mywidth = 0.13 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.03 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'><b>BXD RI<br>
+</b></span></div>
+</layer><script>
+	mytop = 0.03 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.13 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'><b>Strain set<br>
+</b></span></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0.01 * g_width; myheight = 0.03 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99;mso-special-format:lastCR;display:none'><b><br>
+</b></span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.12 * g_height; myleft = 0.14 * g_width; myheight = 0.06 * g_height; mywidth = 0.1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.14 * g_width;
+yy = 0.12 * g_height;
+ht = 0.06 * g_height;
+wd = 0.1 * g_width;
+document.write(
+'<img border=0 src="slide0016_image061.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.1 * g_height; myleft = 0.76 * g_width; myheight = 0.08 * g_height; mywidth = 0.14 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.76 * g_width;
+yy = 0.1 * g_height;
+ht = 0.08 * g_height;
+wd = 0.14 * g_width;
+document.write(
+'<img border=0 src="slide0016_image062.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.2 * g_height; myleft = 0.17 * g_width; myheight = 0.14 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0 * g_width; myheight = 0.11 * g_height; mywidth = 0.08 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.07 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'>fully<br>
+</span></div>
+</layer><script>
+	mytop = 0.03 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.08 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'>inbred<br>
+</span></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.07 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.38 * g_height; myleft = 0.02 * g_width; myheight = 0.1 * g_height; mywidth = 0.12 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'>isogenic<br>
+</span></div>
+</layer><script>
+	mytop = 0.04 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.54 * g_height; myleft = 0.01 * g_width; myheight = 0.14 * g_height; mywidth = 0.12 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0 * g_width; myheight = 0.11 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'>hetero-<br>
+</span></div>
+</layer><script>
+	mytop = 0.03 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'>geneous<br>
+</span></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.74 * g_height; myleft = 0.29 * g_width; myheight = 0.22 * g_height; mywidth = 0.22 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.19 * g_height; mywidth = 0.19 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.15 * g_height; mywidth = 0.19 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.19 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:center'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'>Recombined </span></span></layer><script>
+	mytop = 0.04 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.19 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:center'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'>chromosomes </span></span></layer><script>
+	mytop = 0.08 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.19 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:center'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'>are needed for </span></span></layer><script>
+	mytop = 0.12 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.19 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:center'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'>mapping<br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.16 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.19 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.1 * g_height; myleft = 0.25 * g_width; myheight = 0.1 * g_height; mywidth = 0.1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
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+  <tr>
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+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>The next set of slides
+   provide a very short interlude on QTL mapping. You will need to do some
+   independent reading on this topic if this is your first exposure to QTL
+   mapping. The recombinant inbred strains that we are using in WebQTL and in
+   this particular demo were generated about 25 years ago by Dr. Ben Taylor at
+   The Jackson Laboratory. He crossed a female C57BL/6J mouse with a male
+   DBA/2J mice. At the bottom of this slide we have schematized one chromosome
+   pair from three out of 80 BXD RI strains.<span style="mso-spacerun:
+   yes">&nbsp; </span>The dashed vertical lines that lead to the final BXD RI
+   lines involve 20 full sib matings (about 6 years of breeding). Some lines
+   die<span style="mso-spacerun: yes">&nbsp; </span>out during inbreeding. For
+   example, there is no extant BXD3 or BXD4 strain.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
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+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Gadget;font-size:150%;color:white'>aa<br>
+</span></div>
+</layer><script>
+	mytop = 0.03 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Gadget;font-size:150%;color:white;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.16 * g_height; myleft = 0.73 * g_width; myheight = 0.05 * g_height; mywidth = 0.14 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.73 * g_width;
+yy = 0.16 * g_height;
+ht = 0.05 * g_height;
+wd = 0.14 * g_width;
+document.write(
+'<img border=0 src="slide0017_image075.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.16 * g_height; myleft = 0.74 * g_width; myheight = 0.07 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Gadget;font-size:150%;color:white'>aaaa<br>
+</span></div>
+</layer><script>
+	mytop = 0.03 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"&#1; 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Gadget;font-size:150%;color:white;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.2 * g_height; myleft = 0.71 * g_width; myheight = 0.19 * g_height; mywidth = 0.25 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0.01 * g_width; myheight = 0.16 * g_height; mywidth = 0.24 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.24 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><span style='font-size:267%;color:#E2EBF0'>D2 strain</span><span
+style='font-family:Palatino;font-size:333%;color:#FBFDB8;display:none'><br>
+</span></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.21 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><span style='font-family:Palatino;font-size:333%;color:#FBFDB8;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.43 * g_height; myleft = 0.71 * g_width; myheight = 0.19 * g_height; mywidth = 0.25 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.02 * g_height; myleft = 0.01 * g_width; myheight = 0.16 * g_height; mywidth = 0.24 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.24 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><span style='font-size:267%;color:#F6BF69'>B6 strain</span><span
+style='font-family:Palatino;font-size:333%;color:#F6BF69;display:none'><br>
+</span></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.21 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><span style='font-family:Palatino;font-size:333%;color:#F6BF69;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.17 * g_height; myleft = 0.31 * g_width; myheight = 0.42 * g_height; mywidth = 0.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.31 * g_width;
+yy = 0.17 * g_height;
+ht = 0.42 * g_height;
+wd = 0.01 * g_width;
+document.write(
+'<img border=0 src="slide0017_image076.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.4 * g_height; myleft = 0.31 * g_width; myheight = 0.03 * g_height; mywidth = 0.39 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.31 * g_width;
+yy = 0.4 * g_height;
+ht = 0.03 * g_height;
+wd = 0.39 * g_width;
+document.write(
+'<img border=0 src="slide0017_image077.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.17 * g_height; myleft = 0.4 * g_width; myheight = 0.31 * g_height; mywidth = 0.3 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.03 * g_height; myleft = 0.01 * g_width; myheight = 0.26 * g_height; mywidth = 0.27 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.16 * g_height; mywidth = 0.27 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.27 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'><i>amount of
+</i></span></span></layer><script>
+	mytop = 0.09 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.27 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'><i>transcript</i></span><span
+style='font-family:Palatino;font-size:367%;color:#E9EB5D;display:none'><br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.17 * g_height; myleft = 0 * g_width; myheight = 0.09 * g_height; mywidth = 0.27 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><span style='font-family:Palatino;font-size:367%;color:#E9EB5D;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.06 * g_height; myleft = 0.72 * g_width; myheight = 0.19 * g_height; mywidth = 0.21 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0.01 * g_width; myheight = 0.16 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><span style='font-size:267%;color:white'>4 </span><span style='font-size:
+233%;color:white'>units</span><span style='font-family:Palatino;font-size:333%;
+color:#E9EB5D;display:none'><br>
+</span></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><span style='font-family:Palatino;font-size:333%;color:#E9EB5D;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.29 * g_height; myleft = 0.72 * g_width; myheight = 0.19 * g_height; mywidth = 0.21 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.02 * g_height; myleft = 0.01 * g_width; myheight = 0.16 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><span style='font-size:267%;color:white'>2</span><span style='font-size:
+233%;color:white'> units</span><span style='font-family:Palatino;font-size:
+333%;color:#E9EB5D;display:none'><br>
+</span></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><span style='font-family:Palatino;font-size:333%;color:#E9EB5D;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.15 * g_height; myleft = 0.31 * g_width; myheight = 0.05 * g_height; mywidth = 0.4 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.31 * g_width;
+yy = 0.15 * g_height;
+ht = 0.05 * g_height;
+wd = 0.4 * g_width;
+document.write(
+'<img border=0 src="slide0017_image078.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.17 * g_height; myleft = 0.09 * g_width; myheight = 0.16 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:300%;color:#E2EBF0'>D<br>
+</span></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:300%;color:#E2EBF0;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.17 * g_height; myleft = 0.17 * g_width; myheight = 0.16 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:300%;color:#F6BF69'>B<br>
+</span></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:300%;color:#F6BF69;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.77 * g_height; myleft = 0.05 * g_width; myheight = 0.26 * g_height; mywidth = 1.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.02 * g_height; myleft = 0.01 * g_width; myheight = 0.22 * g_height; mywidth = 1.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.14 * g_height; mywidth = 1.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 1.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E2EBF0'>D</span><span
+style='font-size:233%;color:#E9EB5D'> </span><span style='font-size:200%;
+color:#E9EB5D'>and </span><span style='font-size:233%;color:#F6BF69'>B</span><span
+style='font-size:233%;color:#E9EB5D'> </span><span style='font-size:200%;
+color:#E9EB5D'>may be SNP-like variants in the promoter </span></span></layer><script>
+	mytop = 0.08 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:200%;color:#E9EB5D'>itself (cis
+QTL) or in </span><span style='font-size:200%;color:#EAEC5E'>upstream genes
+(trans QTLs)</span><span style='font-size:300%;color:#E9EB5D;display:none'><br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.14 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.89 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:300%;color:#E9EB5D;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0.04 * g_width; myheight = 0.16 * g_height; mywidth = 0.22 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.22 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:" 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17'><span style='font-size:200%;color:#E9EB5D'>UPSTREAM<br>
+</span></div>
+</layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.22 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:" 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17'><span style='font-size:200%;color:#E9EB5D'>modulators<br>
+</span></div>
+</layer><script>
+	mytop = 0.1 * g_height; myleft = 0.01 * g_width; myheight = 0.05 * g_height; mywidth = 0.2 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:" 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17'><span style='font-size:200%;color:#E9EB5D;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0.44 * g_width; myheight = 0.18 * g_height; mywidth = 0.17 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.16 * g_height; mywidth = 0.14 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.14 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><span style='font-size:300%;color:#E2EBF0'>High<br>
+</span></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.14 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><span style='font-size:300%;color:#E2EBF0;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.63 * g_height; myleft = 0.08 * g_width; myheight = 0.18 * g_height; mywidth = 0.06 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.16 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:300%;color:#E2EBF0'>D<br>
+</span></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:300%;color:#E2EBF0;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.63 * g_height; myleft = 0.15 * g_width; myheight = 0.18 * g_height; mywidth = 0.06 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.16 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:300%;color:#F6BF69'>B<br>
+</span></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:300%;color:#F6BF69;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.71 * g_height; myleft = 0.07 * g_width; myheight = 0.12 * g_height; mywidth = 0.16 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.1 * g_height; mywidth = 0.14 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.14 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:200%;color:#E9EB5D'><i>cis QTL</i></span><span
+style='font-size:200%;color:#E9EB5D;display:none'><br>
+</span></div>
+</layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.12 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:200%;color:#E9EB5D;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.57 * g_height; myleft = -0.01 * g_width; myheight = 0.07 * g_height; mywidth = 1.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = -0.01 * g_width;
+yy = 0.57 * g_height;
+ht = 0.07 * g_height;
+wd = 1.01 * g_width;
+document.write(
+'<img border=0 src="slide0017_image079.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.44 * g_height; myleft = 0.47 * g_width; myheight = 0.12 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:233%;color:#F6BF69'>Low<br>
+</span></div>
+</layer><script>
+	mytop = 0.06 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.07 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:233%;color:#F6BF69;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.58 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 1.14 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.04 * g_height; mywidth = 1.13 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%;mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:17'><span
+style='font-family:Gadget;font-size:167%;color:white'>&gt;&gt;&gt;&gt;PROMOTER--ATG-Exon1-Intron1-Exon2-Intron2
+- etc-3'UTR &gt;&gt;&gt;&gt;&gt;</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.37 * g_height; myleft = 0.08 * g_width; myheight = 0.2 * g_height; mywidth = 0.13 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.08 * g_width;
+yy = 0.37 * g_height;
+ht = 0.2 * g_height;
+wd = 0.13 * g_width;
+document.write(
+'<img border=0 src="slide0017_image080.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.39 * g_height; myleft = 0.1 * g_width; myheight = 0.12 * g_height; mywidth = 0.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:" 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17'><span style='font-family:Palatino;font-size:233%;
+color:white'><b>&#4;<br>
+</b></span></div>
+</layer><script>
+	mytop = 0.06 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:" 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17'><span style='font-family:Palatino;font-size:233%;
+color:white;mso-special-format:lastCR;display:none'><b><br>
+</b></span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.4 * g_height; myleft = 0.17 * g_width; myheight = 0.12 * g_height; mywidth = 0.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:" 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17'><span style='font-family:Palatino;font-size:233%;
+color:white'><b>&#4;<br>
+</b></span></div>
+</layer><script>
+	mytop = 0.06 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:" 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17'><span style='font-family:Palatino;font-size:233%;
+color:white;mso-special-format:lastCR;display:none'><b><br>
+</b></span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.33 * g_height; myleft = 0.08 * g_width; myheight = 0.2 * g_height; mywidth = 0.13 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.08 * g_width;
+yy = 0.33 * g_height;
+ht = 0.2 * g_height;
+wd = 0.13 * g_width;
+document.write(
+'<img border=0 src="slide0017_image081.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.35 * g_height; myleft = 0.17 * g_width; myheight = 0.12 * g_height; mywidth = 0.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:" 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17'><span style='font-family:Palatino;font-size:233%;
+color:white'><b>&#4;<br>
+</b></span></div>
+</layer><script>
+	mytop = 0.06 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:" 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17'><span style='font-family:Palatino;font-size:233%;
+color:white;mso-special-format:lastCR;display:none'><b><br>
+</b></span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.35 * g_height; myleft = 0.1 * g_width; myheight = 0.12 * g_height; mywidth = 0.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:" 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17'><span style='font-family:Palatino;font-size:233%;
+color:white'><b>&#4;<br>
+</b></span></div>
+</layer><script>
+	mytop = 0.06 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:" 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17'><span style='font-family:Palatino;font-size:233%;
+color:white;mso-special-format:lastCR;display:none'><b><br>
+</b></span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.37 * g_height; myleft = 0.2 * g_width; myheight = 0.12 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:" 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17'><span style='font-family:Palatino;font-size:233%;
+color:white;display:none'><b><br>
+</b></span></div>
+</layer><script>
+	mytop = 0.06 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:" 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17'><span style='font-family:Palatino;font-size:233%;
+color:white;mso-special-format:lastCR;display:none'><b><br>
+</b></span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.27 * g_height; myleft = 0.04 * g_width; myheight = 0.21 * g_height; mywidth = 0.21 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
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+//-->
+</script></div>
+</layer><script>
+	mytop = 0.27 * g_height; myleft = 0.05 * g_width; myheight = 0.12 * g_height; mywidth = 0.21 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.1 * g_height; mywidth = 0.19 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.19 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:200%;color:#E9EB5D'><i>trans QTL</i></span><span
+style='font-size:200%;color:#E9EB5D;display:none'><br>
+</span></div>
+</layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.16 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:200%;color:#E9EB5D;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>This slide is
+   illustrates two categories of QTLs that modulate variability in transcript
+   abundance.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>1. cis QTLs are defined
+   as QTLs that are closely linked to the gene whose transcript is the measured
+   trait. For example, a polymorphism in the promoter that affects the binding
+   of a transcription factor. However, cis QTLs can be far upstream or
+   downstream polymorphisms in enhancers. They may also be polymorphisms in
+   neigghboring genes.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>2. trans QTLs map far
+   enough away from the location of the gene that gives rise to the transcript
+   that is being measured so that we can be quite certain that the QTL is not
+   IN the gene itself. The most blatant type of trans-QTL would be a
+   polymorphism in a transcription factor. BUT in the majority of cases, the
+   trans QTLs can be far removed in a mechanistic sense from the actual events
+   modulating transcript abundance. That is why there are three overlappoing
+   arrows above.<span style="mso-spacerun: yes">&nbsp; </span>The way in which
+   an upstream polymorphism influences a downstream difference in mRNA
+   abundance can be very indirect. Effects can :</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3><span
+   style="mso-spacerun: yes">&nbsp;&nbsp; </span>a.<span style="mso-spacerun:
+   yes">&nbsp; </span>cross tissue types (a polymorphic liver enzyme may affect
+   CNS gene expression)</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3><span
+   style="mso-spacerun: yes">&nbsp;&nbsp; </span>b.<span style="mso-spacerun:
+   yes">&nbsp; </span>cross time (the modulator is only expressed for one day
+   during development but has permanent effects in adults),</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3><span
+   style="mso-spacerun: yes">&nbsp;&nbsp; </span>c.<span style="mso-spacerun:
+   yes">&nbsp; </span>may be contingent on environmental factors (heat shock
+   may trigger the expression of a polymorphic factor that affects mRNA
+   abundance).</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0050.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0050.htm
new file mode 100755
index 00000000..3c2f20c7
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0050.htm
@@ -0,0 +1,107 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content="Jun-19-03: WebQTL to exploring upstream control">
+<style media=print>
+<!--.sld
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+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0050.htm");
+}//-->
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+</head>
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+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:" 0 &#1;";mso-line-spacing:" 0 &#1;"'><span
+style='font-family:Verdana;font-size:73%'><i>WebQTL to exploring upstream
+control</i></span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.13 * g_height; myleft = 0.05 * g_width; myheight = 0.62 * g_height; mywidth = 0.89 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
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+document.write(
+'<img border=0 src="slide0018_image083.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.19 * g_height; myleft = 0.55 * g_width; myheight = 0.25 * g_height; mywidth = 0.19 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
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+yy = 0.19 * g_height;
+ht = 0.25 * g_height;
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+'<img border=0 src="slide0018_image084.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.16 * g_height; myleft = 0.74 * g_width; myheight = 0.05 * g_height; mywidth = 0.15 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><span style='font-family:"Gill Sans";font-size:217%;
+color:#FF0F0F'>Just click</span></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Back to the demo. Please
+   bring the Traiit Data and Editing window to the front and look for the
+   Interval Mapping button. Please confirm that you are back to the trait
+   amyloid beta precursor protein.<span style="mso-spacerun: yes">&nbsp;
+   </span>If so, then just click the button.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Notice that the default
+   for:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Select Chrs (chromosomes)
+   is ALL</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Select Probes is Probe
+   Set</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Options: Permuation test
+   YES<span style="mso-spacerun: yes">&nbsp; </span>(1000 is the default
+   number)</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Options: Bootstrap test
+   YES (1000 is the default number)</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0051.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0051.htm
new file mode 100755
index 00000000..39d20b2b
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0051.htm
@@ -0,0 +1,127 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Jun-19-03: WebQTL to exploring upstream control.">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
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+function restore() {
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+document.captureEvents(Event.KEYPRESS);
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+document.onmousedown = _KPH ;
+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0051.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
+bgcolor="#000000">
+<script>
+
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+g_origWidth = 755;
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+
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+
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+	
+g_top = (window.innerHeight - g_height) / 2;
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+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.gif" height=' + ht + ' width=' + wd + '>' );
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+</layer><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 1.05 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:" 0 &#1;";mso-margin-left-alt:233;
+mso-text-indent-alt:0;mso-line-spacing:" 0 &#1;";mso-margin-left-alt:233;
+mso-text-indent-alt:0'><span style='font-family:Verdana;font-size:73%'><i>WebQTL
+to exploring upstream control.</i></span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.27 * g_height; myleft = 0.01 * g_width; myheight = 0.51 * g_height; mywidth = 0.96 * g_width;
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+</script>
+<div><script language=JavaScript><!--
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+ht = 0.51 * g_height;
+wd = 0.96 * g_width;
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+'<img border=0 src="slide0019_image085.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.13 * g_height; myleft = 0.19 * g_width; myheight = 0.06 * g_height; mywidth = 0.6 * g_width;
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+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><span style='font-size:233%;color:#E9EB5D'><i>App maps on
+Chr 16 here</i></span></div>
+</layer><script>
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+//-->
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+</layer><script>
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+</script>
+<div><script language=JavaScript><!--
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+//-->
+</script></div>
+</layer><script>
+	mytop = 0.82 * g_height; myleft = 0.26 * g_width; myheight = 0.14 * g_height; mywidth = 0.9 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.75 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><span style='font-size:267%;color:#E9EB5D'><i>Is App modulated by Chr
+2?<br>
+</i></span></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.9 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><span style='font-size:267%;color:#E9EB5D'><i>Probably, but don�t bet the
+farm. </i></span></div>
+</layer></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>This is the main output
+   type: a so-called full genome interval map.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>The X-axis represents all
+   19 autosomes and the X chromosome as if they were laid end to end with short
+   gaps between the telomere of one chromosome and the centromere of the next
+   chromosome (mouse chromsomes only have a single long arm and the centromere represents
+   the origin of each chromosome for numerical purpose: 0 centimorgans and
+   almost 0 megabases). The blue labels along the bottom of the figure list a
+   subset of markers that were used in mapping. We used 753 markers to perform
+   the mapping but here we just list five markers per chromosome.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>The thick blue wavy line
+   running across chromsomes summarizes the strength of association between
+   variation in the phenotype (App expression differences) and the two
+   genotypes of 753 markers and the intervals between markers (hence, interval
+   mapping).<span style="mso-spacerun: yes">&nbsp; </span>The height of the
+   wave (blue Y-axis to the left) provides the likelihood ratio statistic
+   (LRS). Divide by 4.61 to convert these values to LOD scores.<span
+   style="mso-spacerun: yes">&nbsp; </span>Or you can read them as a
+   chi-square-like statistic.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>The red line and the red
+   axis to the far right provides an estimate of the effect<span
+   style="mso-spacerun: yes">&nbsp; </span>that a QTL has on expression of App
+   (this estimate of the addtive effect tends to be an overestimate). If the
+   red line is below the X-axis then this means that the allele inherited from
+   C57BL/6J (B6 or B) at a particular marker is associated with higher values.
+   If the red line is above the X-axis then the DBA/2J allele (D2 or D) is
+   associated with higher traits. Multiply the additive effect size by 2 to
+   estimate the difference between the set of strains that have the B/B
+   genotype and the D/D genotype at a specific marker. For example, on Chr 2
+   the red line<span style="mso-spacerun: yes">&nbsp; </span>peaks at a value<span
+   style="mso-spacerun: yes">&nbsp; </span>of about 0.25. That means that this
+   region of chromosome 2 is responsible for a 0.5 unit expression difference
+   between B/B strains and the D/D strains. Since the units are log base 2,
+   this is 2^0.5, or about a 41% difference in expression with the D/D group
+   being high.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>The yellow histogram
+   bars: These summarize the results of a whole-genome bootstrap of the trait
+   that is performed 1000 times. What is a bootstrap? A bootstrap provides you
+   a metho of evaluating whether results are robust. If we drop out one strain,
+   do we still get the same results? When mapping quantitative traits, each
+   strain normally gets one equally weighted vote. But inthe bootstrap
+   procedure, we give each strain a random weighting factor of between 0 and
+   1.<span style="mso-spacerun: yes">&nbsp; </span>We then remap the trait and
+   find THE SINGLE BEST LRS VALUE per bootstrap. We do this 1000 times. In this
+   example, most bootstrap results cluster on Chr 2 under the LRS peak. That is
+   somewhat reassuring. But notice that a substantial number of bootstrap
+   results prefer Chr 7 or Chr 18.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>The horizontal dashed
+   lines at 9.6 and 15.9. These lines are the LRS values associated with the
+   suggestive and significant false positive rates for genome-wide scans
+   established by permuations of phenotypes across genotypes. We shuffle
+   randomly 1000 times and obtain a distribution of peak LRS scores to generate
+   a null distribution. Five percent of the time, one of these permuted data
+   sets will have a peak LRS higher than 15.9. We call that level the 0.05
+   significance threshold for a whole genome scan. The p = 0.67 point is the
+   the suggestive level, and corresponds to the green dashed line.<span
+   style="mso-spacerun: yes">&nbsp; </span>These thresholds are conservative
+   for transcripts that have expression variation that is highly heritable. The
+   putative or suggestive QTL on Chr 2 is probably more than just suggestive.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>One other point: the
+   mapping procedure we use is computationally very fast, but it is relatively
+   simple. We are not looking for gene-gene interactions and we are not fitting
+   multiple QTLs in combinations.<span style="mso-spacerun: yes">&nbsp;
+   </span>Consider this QTL analysis a first pass that will highlight hot spots
+   and warm spots that are worth following up on using more sophisticated
+   models.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>CLICKABLE REGIONS:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>1. If you click on the
+   Chromosome number then you will generate a new map just for that chromosome.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>2. If you click on the
+   body of the map, say on the blue line, then you will generate a view<span
+   style="mso-spacerun: yes">&nbsp; </span>on a 10 Mb window of that part of
+   the genome from the UCSC Genome Browser web site.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>3. If you click on a
+   marker symbol, then you will generate a new Trait data and editing window
+   with the genotypes loaded into the window just like any other trait. More on
+   this later.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>NOTE: you can drag these
+   maps off of the browser window and onto your desktop. The will be saved as
+   PNG or PDF files. You can import them into Photoshop or other programs.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0052.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0052.htm
new file mode 100755
index 00000000..54843d1c
--- /dev/null
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@@ -0,0 +1,93 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
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+</script>
+<meta name=Description content="Jun-19-03: The whole neighborhood is modulated!">
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+'<img src="master03_background.gif" height=' + ht + ' width=' + wd + '>' );
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+</layer><script>
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+<div><script>
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+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:" 0 &#1;";mso-line-spacing:" 0 &#1;"'><span
+style='font-family:Verdana;font-size:73%'><i>The whole neighborhood is
+modulated!</i></span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.13 * g_height; myleft = 0.09 * g_width; myheight = 0.8 * g_height; mywidth = 0.8 * g_width;
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+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>App has a suggestive QTL
+   on Chr 2. What about the neighbors that we defined as having shared
+   expression patterns. This figure shows that members of the immediate App
+   neigborhood share a weak Chr 2 QTL.<span style="mso-spacerun: yes">&nbsp;
+   </span>That is what the blue oval in the background is meant to represent.
+   But some transcripts, such as Ndr4 and Psen2 do not share this Chr 2
+   interval.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>QUESTION: What kind of
+   headway can we make in detemining what polymorphism or polymorphisms on Chr
+   2 near 130 Mb might contribute to the variance in the expression of all of
+   these important transcripts?</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0053.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0053.htm
new file mode 100755
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+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content="Jun-19-03: Which gene is the QTL?">
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+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:" 0 &#1;";mso-line-spacing:" 0 &#1;"'><span
+style='font-family:Verdana;font-size:73%'><i>Which gene is the QTL?</i></span></div>
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+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center'><span style='font-size:267%;color:#E9EB5D'><i>Right
+<br>
+</i></span></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.21 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center'><span style='font-size:267%;color:#E9EB5D'><i>position<br>
+</i></span></div>
+</layer><script>
+	mytop = 0.14 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.17 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center'><span style='font-size:267%;color:#E9EB5D'><i>&amp;<br>
+</i></span></div>
+</layer><script>
+	mytop = 0.21 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.17 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center'><span style='font-size:267%;color:#E9EB5D'><i>high
+r</i></span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.5 * g_height; myleft = 0.72 * g_width; myheight = 0.14 * g_height; mywidth = 0.28 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0.02 * g_width; myheight = 0.07 * g_height; mywidth = 0.24 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center'><span style='font-size:267%;color:#E9EB5D'><i>good<br>
+</i></span></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.28 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center'><span style='font-size:267%;color:#E9EB5D'><i>candidates</i></span></div>
+</layer></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face="Times New Roman" size=4><b>Candidate
+   Genes: </b><span style="mso-spacerun: yes">&nbsp;</span>The best we can do
+   at this point is to make an educated guess about the candidacy status of all
+   genes in the QTL support interval. For sake of argument, lets say that we
+   are confident that the polymorphism is located between 130 and 150 Mb (20
+   Mb, equivalent to roughly 10 cM). There will typically be 12 to 15 genes per
+   Mb, so we now would like to evaluate 240 to 300 positional candidates. We
+   would like to highlight the biologically relevant subset of candidates. We
+   could look through gene ontologies and expression levels to help us winnow
+   the list. An alternate way avaiable using WebQTL is to generate a list of
+   those genes in this 20 Mb interval that have transcripts that co-vary in
+   expression with App expression.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face="Times New Roman" size=4>To do this, go
+   back to the Trait Data and Editing window. Sort the correlations by
+   position. Select Return = 500. Then scroll down the list to see positional
+   candidates that share expression with App.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face="Times New Roman" size=4>There are
+   several candidates that have high correlation with App even in this short 20
+   Mb interval. We can rank them by correlation, but they are all close.<span
+   style="mso-spacerun: yes">&nbsp; </span>There is one other imporant approach
+   to ranking these candidates. Are they likely to contain polymorphisms? We
+   can assess the likelihood that they contain polymorphisms by mapping each
+   transcript to see if any have strong cis QTLs. The logic of this search is
+   that a transcript that has a strong cis-QTL is likely to contain functional
+   polymorphisms that effect its own expression. This make is more like that
+   the transcript is a �causative� factor since it is likely to be polymorphic.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0054.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0054.htm
new file mode 100755
index 00000000..1e0d7468
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0054.htm
@@ -0,0 +1,125 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
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+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
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+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'><i>Only one
+of these candidates is a functional </i></span></span></layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.88 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'><i>polymorphism</i></span></span></layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.15 * g_height; myleft = 0.02 * g_width; myheight = 0.84 * g_height; mywidth = 0.41 * g_width;
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+</script>
+<div><script language=JavaScript><!--
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+//-->
+</script></div>
+</layer><script>
+	mytop = 0.31 * g_height; myleft = 0.26 * g_width; myheight = 0.05 * g_height; mywidth = 0.27 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
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+<div><script language=JavaScript><!--
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+'<img border=0 src="slide0022_image093.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.28 * g_height; myleft = 0.54 * g_width; myheight = 0.21 * g_height; mywidth = 0.5 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.5 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><span style='font-size:200%;color:#E9EB5D'><i>Hars2 = 0610006H08Rik<br>
+</i></span></div>
+</layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.47 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:200%;color:#E9EB5D'><i>is a
+cis-QTL with a very </i></span></span></layer><script>
+	mytop = 0.1 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.42 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:200%;color:#E9EB5D'><i>high
+likelihood ratio </i></span></span></layer><script>
+	mytop = 0.16 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.42 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:200%;color:#E9EB5D'><i>statistic
+(LRS) score</i></span><span style='font-size:267%;color:#E9EB5D;mso-special-format:
+lastCR;display:none'><i><br>
+</i></span></span></layer></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>When you do this you
+   will find that only the transcript 0610006H08Rik has a strong cis QTL. See
+   the slide above. The LRS peaks above 35<span style="mso-spacerun:
+   yes">&nbsp; </span>(LOD of greater than 7.5). It turns out that this
+   transcript is really Hars2, also known as histydl tRNA synthase 2.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0055.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0055.htm
new file mode 100755
index 00000000..36b2d736
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0055.htm
@@ -0,0 +1,168 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jun-19-03>
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
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+<script language=JavaScript>
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+</head>
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+wd =   g_width;
+document.write(
+'<img src="master03_background.gif" height=' + ht + ' width=' + wd + '>' );
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+</layer><script>
+	mytop = 0.01 * g_height; myleft = 0.03 * g_width; myheight = 0.08 * g_height; mywidth = 1.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.06 * g_height; mywidth = 1.02 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%;mso-line-spacing:" 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16;mso-line-spacing:" 0 0";mso-margin-left-alt:16;mso-text-indent-alt:16'><span
+style='font-size:233%;color:#E9EB5D'><i>Hars2 probe level analysis: 16 PMs
+mapped</i></span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.1 * g_height; myleft = 0.13 * g_width; myheight = 0.84 * g_height; mywidth = 0.72 * g_width;
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+<div><script language=JavaScript><!--
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+yy = 0.1 * g_height;
+ht = 0.84 * g_height;
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+//-->
+</script></div>
+</layer><script>
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+//-->
+</script></div>
+</layer><script>
+	mytop = 0.6 * g_height; myleft = 0.36 * g_width; myheight = 0.19 * g_height; mywidth = 0.26 * g_width;
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+</script>
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+//-->
+</script></div>
+</layer><script>
+	mytop = 0.28 * g_height; myleft = 0.3 * g_width; myheight = 0.03 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><span style='font-size:117%;color:#FF0F0F'><i>SNP</i></span></div>
+</layer><script>
+	mytop = 0.29 * g_height; myleft = 0.4 * g_width; myheight = 0.03 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%;mso-line-spacing:"100 50 0";mso-line-spacing:"100 50 0"'><span
+style='font-size:117%;color:#FF0F0F'>C in B6, T in D2 </span><span
+style='font-size:150%;color:black;mso-special-format:lastCR;display:none'><b><br>
+</b></span></div>
+</layer><script>
+	mytop = 0.36 * g_height; myleft = 0.5 * g_width; myheight = 0.03 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><span style='font-size:117%;color:#003399;mso-color-index:
+4'><i>no SNPs</i></span></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Let�s look at Hars2 in
+   more detail by mapping all of the perfect match probes (16 of them) that
+   target this transcript.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Go back to the Trait
+   Data and Editing window and select Chr 2 (rather than ALL as shown above)
+   and also select PM Probes. Then click on Interval Mapping button.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>You will get the
+   illustration above, but without the sequence data that we have added.<span
+   style="mso-spacerun: yes">&nbsp; </span>The 16 perfect match probes are
+   arranged in sequence (red is 5 prime, blue is the 3 prime end). For example,
+   the 5 prime-most primer 307387 has the sequence CACTG..... It also has a
+   polymorphism at the 17 nucleotide of this 25 nt probe sequence.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>How do we know that the
+   5 prime probe is polymorphic? By looking up the sequence in the Celera
+   Genomics databases which often contqains sequence data for C57BL/6J (B6
+   above) and for DBA/2J.<span style="mso-spacerun: yes">&nbsp; </span>But two
+   blue probes (14 and 15) do NOT contain SNPs but still have very large LRS
+   scores. The other probes do not perform so wel. Highly variable probe
+   performance is probably a result of the very different stacking energies of
+   DNA-RNA duplexes.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0056.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0056.htm
new file mode 100755
index 00000000..43ebf6d5
--- /dev/null
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@@ -0,0 +1,129 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Jun-19-03: Tissue differences in probe performance">
+<style media=print>
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+ LoadNavSld("slide0056.htm");
+}//-->
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+</head>
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+</layer><script>
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+mso-text-raise:0%'><span style='font-family:"Gill Sans";font-size:300%;
+color:#E9EB5D'><i>Forebrain</i></span></div>
+</layer><script>
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+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><span style='font-family:"Gill Sans";font-size:300%;
+color:#E9EB5D'><i>Stem cells</i></span></div>
+</layer><script>
+	mytop = 0.28 * g_height; myleft = 0.06 * g_width; myheight = 0.36 * g_height; mywidth = 0.62 * g_width;
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+</layer><script>
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+</script></div>
+</layer><script>
+	mytop = 0.51 * g_height; myleft = 0.73 * g_width; myheight = 0.07 * g_height; mywidth = 0.25 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><span style='font-family:"Gill Sans";font-size:300%;
+color:#E9EB5D'><i>Cerebellum</i></span></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>The vertical text says it
+   all: Even when using identical probes, mapping performance (and signal)
+   depends on tissue type and mRNA complexity. This is another gene in the
+   Hars2 interval. Forebrain and tem cell mRNAs were run on the same U74Av2
+   array, whereas the cerebellum mRNA was run on the 430A and 430B array set.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0057.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0057.htm
new file mode 100755
index 00000000..9a7adf61
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0057.htm
@@ -0,0 +1,122 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Jun-19-03: Is there known biology to link Hars2 with App? ">
+<style media=print>
+<!--.sld
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+<script language=JavaScript>
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+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0057.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
+bgcolor="#000000">
+<script>
+
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+wd =   g_width;
+document.write(
+'<img src="master03_background.gif" height=' + ht + ' width=' + wd + '>' );
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+</layer><script>
+	mytop = -0.03 * g_height; myleft = 0.02 * g_width; myheight = 0.18 * g_height; mywidth = 0.96 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.93 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:" 0 &#1;";mso-margin-left-alt:232;
+mso-text-indent-alt:0;mso-line-spacing:" 0 &#1;";mso-margin-left-alt:232;
+mso-text-indent-alt:0'><span style='font-size:68%'><i>Is there known biology to
+link Hars2 with App? </i></span></div>
+</layer></div>
+</layer><script>
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+<div></div>
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+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><span style='font-size:150%;color:#E9EB5D;mso-color-index:3'><b>69 SNPs, 1
+cSNP: <br>
+</b></span></div>
+</layer><script>
+	mytop = 0.04 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.28 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><span style='font-size:150%;color:#E9EB5D;mso-color-index:3'><b>6 exons in
+NCBI, <br>
+</b></span></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.29 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><span style='font-size:150%;color:#E9EB5D;mso-color-index:3'><b>2 exons in
+Celera</b></span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.09 * g_height; myleft = 0.03 * g_width; myheight = 0.42 * g_height; mywidth = 0.6 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.03 * g_width;
+yy = 0.09 * g_height;
+ht = 0.42 * g_height;
+wd = 0.6 * g_width;
+document.write(
+'<img border=0 src="slide0025_image105.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.28 * g_height; myleft = 0.4 * g_width; myheight = 0.69 * g_height; mywidth = 0.55 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.4 * g_width;
+yy = 0.28 * g_height;
+ht = 0.69 * g_height;
+wd = 0.55 * g_width;
+document.write(
+'<img border=0 src="slide0025_image106.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.14 * g_height; myleft = 0.69 * g_width; myheight = 0.06 * g_height; mywidth = 0.23 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><span style='font-family:"Gill Sans";font-size:250%;
+color:#E9EB5D'><i><span style="mso-spacerun: yes">&nbsp;</span>Not obvious</i></span></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Hars2 is not a well
+   characterized gene and their is no biology yet to support the hypothesis
+   that Hars2 modulates gene expression, let alone App expression in specific.
+   There are also serious database/assembly discrepancies between Celera and
+   MGSCv3 regarding the genomic organization of this gene. But there appear to
+   be approximately 69 SNPs in Hars2, one of which results in a substitution.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0058.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0058.htm
new file mode 100755
index 00000000..9feed242
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0058.htm
@@ -0,0 +1,135 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Jun-19-03: WebQTL     link to  www.webqtl.org/search.html">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
+		min = window.innerHeight/20;
+		
+	return min+"pt";
+}
+var SoundEnabled = navigator.plugins && navigator.plugins["LiveAudio"];
+function restore() {
+	self.location.reload();
+}
+function set_size() {
+	document.SlideLayer.width = window.innerWidth;
+	document.SlideLayer.height = window.innerHeight;
+}
+document.captureEvents(Event.MOUSEDOWN);
+document.captureEvents(Event.KEYPRESS);
+document.onkeypress = _KPH ;
+document.onmousedown = _KPH ;
+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0058.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
+bgcolor="#000000">
+<script>
+
+g_origHeight = 566;
+g_origWidth = 755;
+g_width = window.innerWidth - 10;
+g_height = window.innerHeight - 10;
+
+g_top = 0;
+g_left = 0;
+
+if ( g_width < ( g_origWidth * g_height /g_origHeight ) )
+	g_height = g_width * g_origHeight / g_origWidth;
+else
+	g_width = g_origWidth * g_height / g_origHeight;
+	
+g_top = (window.innerHeight - g_height) / 2;
+g_left = (window.innerWidth - g_width) / 2;
+
+document.write( '<layer id=SlideLayer BGCOLOR=#484848 background="" top=' + g_top + ' left=' + g_left + ' height=' + g_height + ' width=' + g_width + ' >' );
+document.SlideLayer.clip.top = 0;
+document.SlideLayer.clip.left = 0;
+document.SlideLayer.clip.height = g_height;
+document.SlideLayer.clip.width = g_width;
+function new_font_size() {
+	var size = 11 * g_width / g_origWidth;
+	if ( size < 1 ) size = 1;
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+<div id=SlideObj class=sld style='position:relative;font-size:&{new_font_size()};'><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.gif" height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.03 * g_height; myleft = 0.02 * g_width; myheight = 0.19 * g_height; mywidth = 0.96 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.19 * g_height; mywidth = 0.93 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:" 0 &#1;";mso-margin-left-alt:232;
+mso-text-indent-alt:0;mso-line-spacing:" 0 &#1;";mso-margin-left-alt:232;
+mso-text-indent-alt:0'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.93 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:68%'><i>WebQTL<span
+style="mso-spacerun: yes">&nbsp;&nbsp;&nbsp; </span><br>
+</i></span></span></layer><script>
+	mytop = 0.06 * g_height; myleft = 0.04 * g_width; myheight = 0.06 * g_height; mywidth = 0.89 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:68%'><i>link to <br>
+</i></span></span></layer><script>
+	mytop = 0.11 * g_height; myleft = 0.04 * g_width; myheight = 0.08 * g_height; mywidth = 0.89 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:86%'><i>www.webqtl.org/search.html</i></span><span
+style='font-size:68%;mso-special-format:lastCR;display:none'><i><br>
+</i></span></span></layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.36 * g_height; myleft = 0.02 * g_width; myheight = 0.45 * g_height; mywidth = 0.73 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.36 * g_height; mywidth = 0.71 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;font-size:213%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.11 * g_height; mywidth = 0.67 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 ";mso-margin-left-alt:348;mso-text-indent-alt:
+56'><script>
+	mytop = 0 * g_height; myleft = 0.05 * g_width; myheight = 0.06 * g_height; mywidth = 0.62 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:94%;color:#E9EB5D;mso-color-index:
+3'><span style='mso-special-format:numbullet;color:#FBFDB8;position:absolute;
+left:-8.06%;font-family:Times;font-size:99%'>1.</span></span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3'>Discovering shared
+expression </span></span></layer><script>
+	mytop = 0.05 * g_height; myleft = 0.05 * g_width; myheight = 0.06 * g_height; mywidth = 0.55 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:94%;color:#E9EB5D;mso-color-index:
+3'>patterns<br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.15 * g_height; myleft = 0 * g_width; myheight = 0.11 * g_height; mywidth = 0.6 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 ";mso-margin-left-alt:348;mso-text-indent-alt:
+56'><script>
+	mytop = 0 * g_height; myleft = 0.05 * g_width; myheight = 0.06 * g_height; mywidth = 0.55 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:94%;color:#E9EB5D;mso-color-index:
+3'><span style='mso-special-format:numbullet;color:#FBFDB8;position:absolute;
+left:-9.09%;font-family:Times;font-size:99%'>2.</span></span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3'>Discovering upstream </span></span></layer><script>
+	mytop = 0.05 * g_height; myleft = 0.05 * g_width; myheight = 0.06 * g_height; mywidth = 0.55 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:94%;color:#E9EB5D;mso-color-index:
+3'>modulators (QTLs)<br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.3 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.71 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:" 0 &#1;";mso-margin-left-alt:348;mso-text-indent-alt:
+56'><script>
+	mytop = 0 * g_height; myleft = 0.05 * g_width; myheight = 0.06 * g_height; mywidth = 0.66 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:94%;color:#E9EB5D;mso-color-index:
+3'><span style='mso-special-format:numbullet;color:#FBFDB8;position:absolute;
+left:-7.61%;font-family:Times;font-size:99%'>3.</span></span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3'>Discovering downstream
+targets</span></span></layer></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.82 * g_height; myleft = 0.04 * g_width; myheight = 0.18 * g_height; mywidth = 0.96 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div></div>
+</layer><script>
+	mytop = 0.65 * g_height; myleft = 0.65 * g_width; myheight = 0.1 * g_height; mywidth = 0.26 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.65 * g_width;
+yy = 0.65 * g_height;
+ht = 0.1 * g_height;
+wd = 0.26 * g_width;
+document.write(
+'<img border=0 src="slide0026_image107.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Part 3.<span
+   style="mso-spacerun: yes">&nbsp; </span>Many investigators would like to
+   discover the set of downstream targets of a gene of interest.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>In a genetic and
+   functional sense, that question can only be addressed effectively if there
+   is genetic variation in the particular gene.<span style="mso-spacerun:
+   yes">&nbsp; </span>We know that Fos is an important transcription factor,
+   but unless it is polymorphic between C57BL/6J and DBA/2J, then it cannot
+   generate a genetic variance signal with which we can work. We can still
+   study covariance of Fos and hundreds of other transcripts (an interesting
+   exercise), but there are no genetic causes-and-effects.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0059.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0059.htm
new file mode 100755
index 00000000..a479ea68
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0059.htm
@@ -0,0 +1,128 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Jun-19-03: Requirement: The gene must be polymorphic to be genetically �upstream�">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
+		min = window.innerHeight/20;
+		
+	return min+"pt";
+}
+var SoundEnabled = navigator.plugins && navigator.plugins["LiveAudio"];
+function restore() {
+	self.location.reload();
+}
+function set_size() {
+	document.SlideLayer.width = window.innerWidth;
+	document.SlideLayer.height = window.innerHeight;
+}
+document.captureEvents(Event.MOUSEDOWN);
+document.captureEvents(Event.KEYPRESS);
+document.onkeypress = _KPH ;
+document.onmousedown = _KPH ;
+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0059.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
+bgcolor="#000000">
+<script>
+
+g_origHeight = 566;
+g_origWidth = 755;
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+g_height = window.innerHeight - 10;
+
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+g_left = 0;
+
+if ( g_width < ( g_origWidth * g_height /g_origHeight ) )
+	g_height = g_width * g_origHeight / g_origWidth;
+else
+	g_width = g_origWidth * g_height / g_origHeight;
+	
+g_top = (window.innerHeight - g_height) / 2;
+g_left = (window.innerWidth - g_width) / 2;
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+document.write( '<layer id=SlideLayer BGCOLOR=#484848 background="" top=' + g_top + ' left=' + g_left + ' height=' + g_height + ' width=' + g_width + ' >' );
+document.SlideLayer.clip.top = 0;
+document.SlideLayer.clip.left = 0;
+document.SlideLayer.clip.height = g_height;
+document.SlideLayer.clip.width = g_width;
+function new_font_size() {
+	var size = 11 * g_width / g_origWidth;
+	if ( size < 1 ) size = 1;
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+}
+</script>
+<div id=SlideObj class=sld style='position:relative;font-size:&{new_font_size()};'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 1 * g_height; mywidth = 1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.gif" height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.02 * g_height; myleft = 0.02 * g_width; myheight = 0.18 * g_height; mywidth = 1.08 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0.01 * g_width; myheight = 0.16 * g_height; mywidth = 1.07 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:" 0 &#1;";mso-line-spacing:" 0 &#1;"'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 1.07 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:82%'><i>Requirement: The gene
+must be polymorphic to </i></span></span></layer><script>
+	mytop = 0.08 * g_height; myleft = 0.03 * g_width; myheight = 0.07 * g_height; mywidth = 0.85 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:82%'><i>be genetically
+�upstream�</i></span><span style='font-size:82%;mso-special-format:lastCR;
+display:none'><br>
+</span></span></layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.21 * g_height; myleft = 0.02 * g_width; myheight = 0.15 * g_height; mywidth = 0.84 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.04 * g_height; myleft = 0.01 * g_width; myheight = 0.06 * g_height; mywidth = 0.83 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:" 0 &#1;";mso-line-spacing:" 0 &#1;"'><span
+style='font-size:64%'><i>What are targets of the Hars2 polymorphisms?</i></span><span
+style='font-size:82%;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.33 * g_height; myleft = 0.01 * g_width; myheight = 0.32 * g_height; mywidth = 0.49 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.01 * g_width;
+yy = 0.33 * g_height;
+ht = 0.32 * g_height;
+wd = 0.49 * g_width;
+document.write(
+'<img border=0 src="slide0027_image108.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.33 * g_height; myleft = 0.53 * g_width; myheight = 0.58 * g_height; mywidth = 0.44 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.53 * g_width;
+yy = 0.33 * g_height;
+ht = 0.58 * g_height;
+wd = 0.44 * g_width;
+document.write(
+'<img border=0 src="slide0027_image109.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.69 * g_height; myleft = 0.07 * g_width; myheight = 0.21 * g_height; mywidth = 0.51 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.43 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><span style='font-family:"Gill Sans";font-size:267%;color:#E9EB5D'><i>App
+and many other<br>
+</i></span></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.51 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:267%;
+color:#E9EB5D'><i>correlated transcripts and </i></span></span></layer><script>
+	mytop = 0.14 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.43 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:267%;
+color:#E9EB5D'><i>other traits.</i></span></span></layer></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Genes must be polymorphic
+   to generate downstream genetic effects (as opposed to downstream molecular
+   effects). Hars2 meets this condition because we have already mapped a
+   functional polymorphism in the gene. We can therefore posit that Hars2 is a
+   QT gene. What transcripts are downstream? <i>App</i> is one obvious
+   candidate, but there are many more.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>The are several ways to
+   look for downstream targets. The best and most obvious is to look up all
+   transcripts that have high correlations with Hars2 itself. You should know
+   how to do this. An alternative method is shown here for teaching purpose and
+   to show you what to do if your gene of interest is not in our database. You
+   need to know:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Times size=3>1.</font><font
+   face=Verdana size=3> Where your gene is located. You need this information
+   to find a surrogate marker; a marker that is located very close to your gene
+   of interest.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>2. That your gene is
+   polymorphic between C57BL/6J and DBA/2J.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Let�s look at the
+   correlation of Hars2 with BXD genotypes as shown in the slide above to
+   illustrate how to use markers as surrogate traits.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Go to the Trait Date and
+   Editing window one more time. We want the data for Hars2 this time, not App.
+   You should be able to show that Hars2 has a high<span style="mso-spacerun:
+   yes">&nbsp; </span>correlation with D2Mit423 as shown in the slide above.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>By clicking on the symbol
+   D2Mit423 in the Correlation window, you will generate a new Trait Data
+   window shown on the next slide.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0060.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0060.htm
new file mode 100755
index 00000000..aa804b9a
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0060.htm
@@ -0,0 +1,134 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Jun-19-03: Direct correlations between genotypes and traits">
+<style media=print>
+<!--.sld
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+</script><script language=JavaScript><!--
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+ LoadNavSld("slide0060.htm");
+}//-->
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+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
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+<div id=SlideObj class=sld style='position:relative;font-size:&{new_font_size()};'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 1 * g_height; mywidth = 1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.gif" height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = -0.01 * g_height; myleft = 0.02 * g_width; myheight = 0.11 * g_height; mywidth = 1.1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 1.08 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:" 0 &#1;";mso-line-spacing:" 0 &#1;"'><span
+style='font-size:82%'><i>Direct correlations between genotypes and traits</i></span><span
+style='font-size:82%;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.22 * g_height; myleft = 0.03 * g_width; myheight = 0.42 * g_height; mywidth = 0.34 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.34 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><span style='font-family:"Gill Sans";font-size:267%;color:#E9EB5D'><i>App
+and<br>
+</i></span></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.34 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:267%;
+color:#E9EB5D'><i>correlated traits </i></span></span></layer><script>
+	mytop = 0.14 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.34 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:267%;
+color:#E9EB5D'><i>would be obvious </i></span></span></layer><script>
+	mytop = 0.21 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.34 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:267%;
+color:#E9EB5D'><i>candidates to </i></span></span></layer><script>
+	mytop = 0.28 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.34 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:267%;
+color:#E9EB5D'><i>correlate with </i></span></span></layer><script>
+	mytop = 0.35 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.34 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:267%;
+color:#E9EB5D'><i>D2Mit423</i></span></span></layer></div>
+</layer><script>
+	mytop = 0.1 * g_height; myleft = 0.33 * g_width; myheight = 0.87 * g_height; mywidth = 0.4 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.33 * g_width;
+yy = 0.1 * g_height;
+ht = 0.87 * g_height;
+wd = 0.4 * g_width;
+document.write(
+'<img border=0 src="slide0028_image110.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.82 * g_height; myleft = 0.65 * g_width; myheight = 0.07 * g_height; mywidth = 0.14 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.65 * g_width;
+yy = 0.82 * g_height;
+ht = 0.07 * g_height;
+wd = 0.14 * g_width;
+document.write(
+'<img border=0 src="slide0028_image111.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.79 * g_height; myleft = 0.82 * g_width; myheight = 0.13 * g_height; mywidth = 0.13 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.13 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><span style='font-family:"Gill Sans";font-size:267%;color:#E9EB5D'><i>B =
+-1<br>
+</i></span></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.12 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><span style='font-family:"Gill Sans";font-size:267%;color:#E9EB5D'><i>D =
+1</i></span></div>
+</layer></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>We can review the set of
+   correlations between the marker D2Mit423 and all transcripts in
+   forebrain.<span style="mso-spacerun: yes">&nbsp; </span>This is in essence a
+   backwards way of mapping QTLs. We are considering one marker and asking what
+   traits correlate to the marker and how well.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0061.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0061.htm
new file mode 100755
index 00000000..cce3b81c
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0061.htm
@@ -0,0 +1,124 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Jun-19-03: What�s downstream of Chr 2 near Hars2?">
+<style media=print>
+<!--.sld
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+<script language=JavaScript>
+function font_size() {
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+document.SlideLayer.clip.width = g_width;
+function new_font_size() {
+	var size = 11 * g_width / g_origWidth;
+	if ( size < 1 ) size = 1;
+	return size+"pt";
+}
+</script>
+<div id=SlideObj class=sld style='position:relative;font-size:&{new_font_size()};'><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.gif" height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0 * g_height; myleft = 0.02 * g_width; myheight = 0.11 * g_height; mywidth = 0.96 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.95 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:" 0 &#1;";mso-line-spacing:" 0 &#1;"'><span
+style='font-size:82%'><i>What�s downstream of Chr 2 near Hars2?</i></span><span
+style='font-size:82%;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.09 * g_height; myleft = 0.01 * g_width; myheight = 0.79 * g_height; mywidth = 0.83 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.01 * g_width;
+yy = 0.09 * g_height;
+ht = 0.79 * g_height;
+wd = 0.83 * g_width;
+document.write(
+'<img border=0 src="slide0029_image112.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.86 * g_height; myleft = 0.02 * g_width; myheight = 0.11 * g_height; mywidth = 1.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.03 * g_height; myleft = 0.01 * g_width; myheight = 0.06 * g_height; mywidth = 1.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:" 0 &#1;";mso-line-spacing:" 0 &#1;"'><span
+style='font-size:64%'><i>Notice many Chr 2 hits: Linkage disequilibrium limits
+specificity</i></span><span style='font-size:64%;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.27 * g_height; myleft = 0.07 * g_width; myheight = 0.17 * g_height; mywidth = 0.22 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.07 * g_width;
+yy = 0.27 * g_height;
+ht = 0.17 * g_height;
+wd = 0.22 * g_width;
+document.write(
+'<img border=0 src="slide0029_image113.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.24 * g_height; myleft = 0.27 * g_width; myheight = 0.04 * g_height; mywidth = 0.16 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><span style='font-size:150%;color:#FF0F0F'><b>Click here</b></span></div>
+</layer><script>
+	mytop = 0.39 * g_height; myleft = 0.48 * g_width; myheight = 0.05 * g_height; mywidth = 0.12 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.48 * g_width;
+yy = 0.39 * g_height;
+ht = 0.05 * g_height;
+wd = 0.12 * g_width;
+document.write(
+'<img border=0 src="slide0029_image114.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>The marker D2Mit423
+   correlates moderately well with a number of Chr 2 transcripts. This is due
+   to linkage disequilibrium. These correlations are not due to a molecular
+   interactions other than being close together on a chromosome.<span
+   style="mso-spacerun: yes">&nbsp; </span>But we have circled one transcript,
+   actinin alpha 2, that has a moderately good correlation (0.59) with
+   D2Mit423. If we map this gene we expect to find a suggestive QTL that peaks
+   near D2Mit423</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0062.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0062.htm
new file mode 100755
index 00000000..c8c24f70
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0062.htm
@@ -0,0 +1,96 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Jun-19-03: What�s downstream of Chr 2 near Hars2?">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
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+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
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+	self.location.reload();
+}
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+	document.SlideLayer.height = window.innerHeight;
+}
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+document.captureEvents(Event.KEYPRESS);
+document.onkeypress = _KPH ;
+document.onmousedown = _KPH ;
+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0062.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
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+<script>
+
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+
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+	
+g_top = (window.innerHeight - g_height) / 2;
+g_left = (window.innerWidth - g_width) / 2;
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+document.SlideLayer.clip.left = 0;
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+	if ( size < 1 ) size = 1;
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+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 1 * g_height; mywidth = 1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.gif" height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0 * g_height; myleft = 0.02 * g_width; myheight = 0.11 * g_height; mywidth = 0.96 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.95 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:" 0 &#1;";mso-line-spacing:" 0 &#1;"'><span
+style='font-size:82%'><i>What�s downstream of Chr 2 near Hars2?</i></span><span
+style='font-size:82%;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.12 * g_height; myleft = 0.07 * g_width; myheight = 0.75 * g_height; mywidth = 0.61 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.07 * g_width;
+yy = 0.12 * g_height;
+ht = 0.75 * g_height;
+wd = 0.61 * g_width;
+document.write(
+'<img border=0 src="slide0030_image115.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.9 * g_height; myleft = 0.05 * g_width; myheight = 0.06 * g_height; mywidth = 1.07 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><span style='font-family:"Gill Sans";font-size:233%;
+color:#E9EB5D'><i>modest support that Actn2 is modulated by the Hars2 region</i></span></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>There is some support for
+   the hypothesis that Actn2 is downstream of a polymorphism in the Hars2
+   region. But again, due to the 10 to 20 Mb precision of the mapping data,
+   this relation could be generated by a large number of other polymorphisms
+   close to Hars2. In the absence of a biological connection between Actn2 and
+   Hars2 we have a weak hypothesis. If there were a plausible functional
+   connection between the two genes, then this hypothesis could be quickly
+   upgraded.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0063.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0063.htm
new file mode 100755
index 00000000..53358da8
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0063.htm
@@ -0,0 +1,139 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Jun-19-03: Does Hars2 correlate with Actn2 strongly?">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
+		min = window.innerHeight/20;
+		
+	return min+"pt";
+}
+var SoundEnabled = navigator.plugins && navigator.plugins["LiveAudio"];
+function restore() {
+	self.location.reload();
+}
+function set_size() {
+	document.SlideLayer.width = window.innerWidth;
+	document.SlideLayer.height = window.innerHeight;
+}
+document.captureEvents(Event.MOUSEDOWN);
+document.captureEvents(Event.KEYPRESS);
+document.onkeypress = _KPH ;
+document.onmousedown = _KPH ;
+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0063.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
+bgcolor="#000000">
+<script>
+
+g_origHeight = 566;
+g_origWidth = 755;
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+g_height = window.innerHeight - 10;
+
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+g_left = 0;
+
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+	g_height = g_width * g_origHeight / g_origWidth;
+else
+	g_width = g_origWidth * g_height / g_origHeight;
+	
+g_top = (window.innerHeight - g_height) / 2;
+g_left = (window.innerWidth - g_width) / 2;
+
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+function new_font_size() {
+	var size = 11 * g_width / g_origWidth;
+	if ( size < 1 ) size = 1;
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+}
+</script>
+<div id=SlideObj class=sld style='position:relative;font-size:&{new_font_size()};'><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.gif" height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = -0.01 * g_height; myleft = 0.02 * g_width; myheight = 0.09 * g_height; mywidth = 0.95 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0.01 * g_width; myheight = 0.06 * g_height; mywidth = 0.92 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:" 0 &#1;";mso-line-spacing:" 0 &#1;"'><span
+style='font-size:73%'><i>Does Hars2 correlate with Actn2 strongly?</i></span><span
+style='font-size:82%;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0.02 * g_width; myheight = 0.28 * g_height; mywidth = 0.47 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.02 * g_width;
+yy = 0.07 * g_height;
+ht = 0.28 * g_height;
+wd = 0.47 * g_width;
+document.write(
+'<img border=0 src="slide0031_image116.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.33 * g_height; myleft = 0.3 * g_width; myheight = 0.66 * g_height; mywidth = 0.67 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.3 * g_width;
+yy = 0.33 * g_height;
+ht = 0.66 * g_height;
+wd = 0.67 * g_width;
+document.write(
+'<img border=0 src="slide0031_image117.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.17 * g_height; myleft = 0.33 * g_width; myheight = 0.15 * g_height; mywidth = 0.15 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.33 * g_width;
+yy = 0.17 * g_height;
+ht = 0.15 * g_height;
+wd = 0.15 * g_width;
+document.write(
+'<img border=0 src="slide0031_image118.gif" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.41 * g_height; myleft = 0.02 * g_width; myheight = 0.42 * g_height; mywidth = 0.28 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.26 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:267%;
+color:#E9EB5D'><i>Plenty of high </i></span></span></layer><script>
+	mytop = 0.07 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.25 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:267%;
+color:#E9EB5D'><i>correlations, </i></span></span></layer><script>
+	mytop = 0.14 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.25 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:267%;
+color:#E9EB5D'><i>including 2 </i></span></span></layer><script>
+	mytop = 0.21 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.28 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:267%;
+color:#E9EB5D'><i>actins, but not </i></span></span></layer><script>
+	mytop = 0.28 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.25 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:267%;
+color:#E9EB5D'><i>to Actn2 </i></span></span></layer><script>
+	mytop = 0.35 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.25 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:267%;
+color:#E9EB5D'><i>specifically.</i></span></span></layer></div>
+</layer><script>
+	mytop = 0.16 * g_height; myleft = 0.52 * g_width; myheight = 0.06 * g_height; mywidth = 0.25 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><span style='font-family:"Gill Sans";font-size:267%;
+color:#E9EB5D'><i>Sort by gene</i></span></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>We can test the Hars2 to
+   Actn2 connection directly. This process weakens the putative association. We
+   are ready to move on and examine other candidates in the Hars2 region near
+   D2Mit423.<span style="mso-spacerun: yes">&nbsp; </span>Or in your case,
+   please start from the beginning using other genes and transcripts and
+   tissues that interest you more than this App-Hsp84-Hars2 example.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>This concludes the first
+   demonstation of how to use some of the WebQTL features. Please explore.
+   Please also send feedback for improvements or additions to
+   rwilliam@nb.utmem.edu</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0064.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0064.htm
new file mode 100755
index 00000000..f75dd8f4
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0064.htm
@@ -0,0 +1,100 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Jun-19-03: Contact for comments and improvements:">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
+		min = window.innerHeight/20;
+		
+	return min+"pt";
+}
+var SoundEnabled = navigator.plugins && navigator.plugins["LiveAudio"];
+function restore() {
+	self.location.reload();
+}
+function set_size() {
+	document.SlideLayer.width = window.innerWidth;
+	document.SlideLayer.height = window.innerHeight;
+}
+document.captureEvents(Event.MOUSEDOWN);
+document.captureEvents(Event.KEYPRESS);
+document.onkeypress = _KPH ;
+document.onmousedown = _KPH ;
+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0064.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
+bgcolor="#000000">
+<script>
+
+g_origHeight = 566;
+g_origWidth = 755;
+g_width = window.innerWidth - 10;
+g_height = window.innerHeight - 10;
+
+g_top = 0;
+g_left = 0;
+
+if ( g_width < ( g_origWidth * g_height /g_origHeight ) )
+	g_height = g_width * g_origHeight / g_origWidth;
+else
+	g_width = g_origWidth * g_height / g_origHeight;
+	
+g_top = (window.innerHeight - g_height) / 2;
+g_left = (window.innerWidth - g_width) / 2;
+
+document.write( '<layer id=SlideLayer BGCOLOR=#484848 background="" top=' + g_top + ' left=' + g_left + ' height=' + g_height + ' width=' + g_width + ' >' );
+document.SlideLayer.clip.top = 0;
+document.SlideLayer.clip.left = 0;
+document.SlideLayer.clip.height = g_height;
+document.SlideLayer.clip.width = g_width;
+function new_font_size() {
+	var size = 11 * g_width / g_origWidth;
+	if ( size < 1 ) size = 1;
+	return size+"pt";
+}
+</script>
+<div id=SlideObj class=sld style='position:relative;font-size:&{new_font_size()};'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 1 * g_height; mywidth = 1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.gif" height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.02 * g_height; myleft = 0.02 * g_width; myheight = 0.1 * g_height; mywidth = 0.94 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0.01 * g_width; myheight = 0.06 * g_height; mywidth = 0.92 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:" 0 &#1;";mso-line-spacing:" 0 &#1;"'><span
+style='font-size:73%'><i>Contact for comments and improvements:</i></span><span
+style='font-size:82%;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.12 * g_height; myleft = 0.06 * g_width; myheight = 0.32 * g_height; mywidth = 0.9 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.32 * g_height; mywidth = 0.87 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:" 0 &#1;";mso-line-spacing:" 0 &#1;"'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.87 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:82%'>rwilliam@ nb.utmem.edu<br>
+</span></span></layer><script>
+	mytop = 0.08 * g_height; myleft = 0.04 * g_width; myheight = 0.07 * g_height; mywidth = 0.83 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:82%'>kenneth.manly@roswellpark.org<br>
+</span></span></layer><script>
+	mytop = 0.16 * g_height; myleft = 0.04 * g_width; myheight = 0.07 * g_height; mywidth = 0.83 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:82%'>lulu@ nb.utmem.edu<br>
+</span></span></layer><script>
+	mytop = 0.24 * g_height; myleft = 0.04 * g_width; myheight = 0.07 * g_height; mywidth = 0.83 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:82%'>echesler@ nb.utmem.edu</span></span></layer></div>
+</layer></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>END</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0065.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0065.htm
new file mode 100755
index 00000000..df6b13dd
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0065.htm
@@ -0,0 +1,34 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Jun-19-03: WebQTL Demonstration One please link to  www.webqtl.org/search.html">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:80% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript>
+	if ( parent.base.msie < 0 ) {
+	  	document.captureEvents(Event.MOUSEDOWN);
+  		document.captureEvents(Event.KEYPRESS);
+  		document.onkeypress = _KPH;
+  		document.onmousedown = _KPH;
+  	}
+  		
+function restore() {
+	if ( parent.base.msie < 0 ) 
+		self.location.reload();
+}
+</script>
+<script language=JavaScript>
+function flatLoad() {
+if ( !parent.IsFullScrMode() )
+	parent.base.highlite();
+DoOnLoad();
+  	
+      
+      if ( parent.IsFullScrMode() && parent.NavPopup && !parent.NavPopup.closed )
+      		parent.NavPopup.focus();
+      	else	
+  		self.focus();
+  	parent.base.SldUpdated( "slide0065.htm" );
+ } 	
+ </script><script language=JavaScript><!--
+function DoOnLoad() { 
+ }//-->
+</script>
+</head>
+<body bgcolor="#000000" onresize="restore()" onload="flatLoad()"
+onclick="DocumentOnClick(event)" onkeypress="_KPH(event)">
+<center><img src=Slide0001.gif border=0 usemap="#Slide0001.gif_map"></center>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0066.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0066.htm
new file mode 100755
index 00000000..d0a85cac
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0066.htm
@@ -0,0 +1,34 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jun-19-03>
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:80% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript>
+	if ( parent.base.msie < 0 ) {
+	  	document.captureEvents(Event.MOUSEDOWN);
+  		document.captureEvents(Event.KEYPRESS);
+  		document.onkeypress = _KPH;
+  		document.onmousedown = _KPH;
+  	}
+  		
+function restore() {
+	if ( parent.base.msie < 0 ) 
+		self.location.reload();
+}
+</script>
+<script language=JavaScript>
+function flatLoad() {
+if ( !parent.IsFullScrMode() )
+	parent.base.highlite();
+DoOnLoad();
+  	
+      
+      if ( parent.IsFullScrMode() && parent.NavPopup && !parent.NavPopup.closed )
+      		parent.NavPopup.focus();
+      	else	
+  		self.focus();
+  	parent.base.SldUpdated( "slide0066.htm" );
+ } 	
+ </script><script language=JavaScript><!--
+function DoOnLoad() { 
+ }//-->
+</script>
+</head>
+<body bgcolor="#000000" onresize="restore()" onload="flatLoad()"
+onclick="DocumentOnClick(event)" onkeypress="_KPH(event)">
+<center><img src=Slide0002.gif border=0 usemap="#Slide0002.gif_map"></center>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0067.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0067.htm
new file mode 100755
index 00000000..47285a63
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0067.htm
@@ -0,0 +1,34 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content="Jun-19-03: Search results">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:80% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript>
+	if ( parent.base.msie < 0 ) {
+	  	document.captureEvents(Event.MOUSEDOWN);
+  		document.captureEvents(Event.KEYPRESS);
+  		document.onkeypress = _KPH;
+  		document.onmousedown = _KPH;
+  	}
+  		
+function restore() {
+	if ( parent.base.msie < 0 ) 
+		self.location.reload();
+}
+</script>
+<script language=JavaScript>
+function flatLoad() {
+if ( !parent.IsFullScrMode() )
+	parent.base.highlite();
+DoOnLoad();
+  	
+      
+      if ( parent.IsFullScrMode() && parent.NavPopup && !parent.NavPopup.closed )
+      		parent.NavPopup.focus();
+      	else	
+  		self.focus();
+  	parent.base.SldUpdated( "slide0067.htm" );
+ } 	
+ </script><script language=JavaScript><!--
+function DoOnLoad() { 
+ }//-->
+</script>
+</head>
+<body bgcolor="#000000" onresize="restore()" onload="flatLoad()"
+onclick="DocumentOnClick(event)" onkeypress="_KPH(event)">
+<center><img src=Slide0003.gif border=0 usemap="#Slide0003.gif_map"></center>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0068.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0068.htm
new file mode 100755
index 00000000..325af969
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0068.htm
@@ -0,0 +1,34 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jun-19-03>
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:80% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript>
+	if ( parent.base.msie < 0 ) {
+	  	document.captureEvents(Event.MOUSEDOWN);
+  		document.captureEvents(Event.KEYPRESS);
+  		document.onkeypress = _KPH;
+  		document.onmousedown = _KPH;
+  	}
+  		
+function restore() {
+	if ( parent.base.msie < 0 ) 
+		self.location.reload();
+}
+</script>
+<script language=JavaScript>
+function flatLoad() {
+if ( !parent.IsFullScrMode() )
+	parent.base.highlite();
+DoOnLoad();
+  	
+      
+      if ( parent.IsFullScrMode() && parent.NavPopup && !parent.NavPopup.closed )
+      		parent.NavPopup.focus();
+      	else	
+  		self.focus();
+  	parent.base.SldUpdated( "slide0068.htm" );
+ } 	
+ </script><script language=JavaScript><!--
+function DoOnLoad() { 
+ }//-->
+</script>
+</head>
+<body bgcolor="#000000" onresize="restore()" onload="flatLoad()"
+onclick="DocumentOnClick(event)" onkeypress="_KPH(event)">
+<center><img src=Slide0004.gif border=0 usemap="#Slide0004.gif_map"></center>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0069.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0069.htm
new file mode 100755
index 00000000..4b91f9fb
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0069.htm
@@ -0,0 +1,34 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href=WebQTLDemo.ppt>
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jun-19-03>
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:80% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript>
+	if ( parent.base.msie < 0 ) {
+	  	document.captureEvents(Event.MOUSEDOWN);
+  		document.captureEvents(Event.KEYPRESS);
+  		document.onkeypress = _KPH;
+  		document.onmousedown = _KPH;
+  	}
+  		
+function restore() {
+	if ( parent.base.msie < 0 ) 
+		self.location.reload();
+}
+</script>
+<script language=JavaScript>
+function flatLoad() {
+if ( !parent.IsFullScrMode() )
+	parent.base.highlite();
+DoOnLoad();
+  	
+      
+      if ( parent.IsFullScrMode() && parent.NavPopup && !parent.NavPopup.closed )
+      		parent.NavPopup.focus();
+      	else	
+  		self.focus();
+  	parent.base.SldUpdated( "slide0069.htm" );
+ } 	
+ </script><script language=JavaScript><!--
+function DoOnLoad() { 
+ }//-->
+</script>
+</head>
+<body bgcolor="#000000" onresize="restore()" onload="flatLoad()"
+onclick="DocumentOnClick(event)" onkeypress="_KPH(event)">
+<center><img src=Slide0005.gif border=0 usemap="#Slide0005.gif_map"></center>
+</body>
+</html>
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+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
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new file mode 100755
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+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
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+<script>
+if ( ! top.PPTPRESENTATION ) {
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+}
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+  	parent.base.SldUpdated( "slide0074.htm" );
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+function DoOnLoad() { 
+ }//-->
+</script>
+</head>
+<body bgcolor="#000000" onresize="restore()" onload="flatLoad()"
+onclick="DocumentOnClick(event)" onkeypress="_KPH(event)">
+<center><img src=Slide0010.gif border=0 usemap="#Slide0010.gif_map"></center>
+</body>
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diff --git a/web/tutorial/ppt/WebQTLDemo_files/slide0075.htm b/web/tutorial/ppt/WebQTLDemo_files/slide0075.htm
new file mode 100755
index 00000000..cdfe20c4
--- /dev/null
+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0075.htm
@@ -0,0 +1,34 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
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+<link title="Presentation File" type="application/powerpoint" rel=alternate
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+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
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+<script language=JavaScript src=script.js></script><script language=JavaScript>
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+  		document.captureEvents(Event.KEYPRESS);
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+  		document.onmousedown = _KPH;
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+function restore() {
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+		self.location.reload();
+}
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+<script language=JavaScript>
+function flatLoad() {
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+	parent.base.highlite();
+DoOnLoad();
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+      
+      if ( parent.IsFullScrMode() && parent.NavPopup && !parent.NavPopup.closed )
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+  		self.focus();
+  	parent.base.SldUpdated( "slide0075.htm" );
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+</head>
+<body bgcolor="#000000" onresize="restore()" onload="flatLoad()"
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+<link title="Presentation File" type="application/powerpoint" rel=alternate
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new file mode 100755
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+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
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+<link title="Presentation File" type="application/powerpoint" rel=alternate
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new file mode 100755
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+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
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new file mode 100755
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+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0084.htm
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+}
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new file mode 100755
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+<link title="Presentation File" type="application/powerpoint" rel=alternate
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+<script>
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new file mode 100755
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+++ b/web/tutorial/ppt/WebQTLDemo_files/slide0088.htm
@@ -0,0 +1,34 @@
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+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 10">
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+<link title="Presentation File" type="application/powerpoint" rel=alternate
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+<script>
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+DoOnLoad();
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+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0016.gif
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new file mode 100755
index 00000000..a05bcf40
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+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0017.gif
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0018.gif b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0018.gif
new file mode 100755
index 00000000..b95f327d
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0018.gif
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new file mode 100755
index 00000000..49c8027e
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0019.gif
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0020.gif b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0020.gif
new file mode 100755
index 00000000..29d1f3ac
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0020.gif
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0021.gif b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0021.gif
new file mode 100755
index 00000000..f2fa78e6
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new file mode 100755
index 00000000..4772ff83
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0022.gif
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0023.gif b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0023.gif
new file mode 100755
index 00000000..d39b99b1
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+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0023.gif
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0024.gif b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0024.gif
new file mode 100755
index 00000000..c1ea23b7
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+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0024.gif
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0025.gif b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0025.gif
new file mode 100755
index 00000000..b061328a
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+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0025.gif
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0026.gif b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0026.gif
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index 00000000..f3f81956
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diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0027.gif b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0027.gif
new file mode 100755
index 00000000..bc50be39
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diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0029.gif b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0029.gif
new file mode 100755
index 00000000..42d09c86
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0029.gif
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0030.gif b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0030.gif
new file mode 100755
index 00000000..8e5775c1
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0030.gif
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0031.gif b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0031.gif
new file mode 100755
index 00000000..782076fa
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/Slide0031.gif
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/blank_notes.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/blank_notes.htm
new file mode 100755
index 00000000..4be5a447
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/blank_notes.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black topmargin=0 leftmargin=0>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/endshow.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/endshow.htm
new file mode 100755
index 00000000..1ada008c
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/endshow.htm
@@ -0,0 +1 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+</head>
+<body bgcolor=black>
+<center>
+<p><font face=Arial color=white size=2><br>
+<b>Open the default .htm file to view this Web presentation.</b></font></p>
+</center>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/error.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/error.htm
new file mode 100755
index 00000000..7444866d
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/error.htm
@@ -0,0 +1 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+</head>
+<body bgcolor=black>
+<center>
+<p><font face=Arial color=white size=2><br>
+<b>This presentation contains content that your browser is unable to display. This presentation was optimized for the recent version of Microsoft Internet Explorer and Netscape Navigator 4.</b></font></p>
+</center>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/filelist.xml b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/filelist.xml
new file mode 100755
index 00000000..403bf8d7
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/filelist.xml
@@ -0,0 +1 @@
+<xml xmlns:o="urn:schemas-microsoft-com:office:office">
+ <o:File HRef="master03.htm"/>
+ <o:File HRef="master05.htm"/>
+ <o:File HRef="master02.htm"/>
+ <o:File HRef="slide0001.htm"/>
+ <o:File HRef="master03_background.png"/>
+ <o:File HRef="slide0001_image001.png"/>
+ <o:File HRef="slide0001_image002.png"/>
+ <o:File HRef="slide0002.htm"/>
+ <o:File HRef="master05_background.png"/>
+ <o:File HRef="slide0002_image003.png"/>
+ <o:File HRef="slide0002_image004.png"/>
+ <o:File HRef="slide0002_image005.png"/>
+ <o:File HRef="slide0002_image006.png"/>
+ <o:File HRef="slide0002_image007.png"/>
+ <o:File HRef="slide0002_image008.png"/>
+ <o:File HRef="slide0002_image009.png"/>
+ <o:File HRef="slide0002_image010.png"/>
+ <o:File HRef="slide0002_image011.png"/>
+ <o:File HRef="slide0002_image012.png"/>
+ <o:File HRef="slide0002_image013.png"/>
+ <o:File HRef="slide0002_image014.png"/>
+ <o:File HRef="slide0002_image015.png"/>
+ <o:File HRef="slide0002_image016.png"/>
+ <o:File HRef="slide0002_image017.png"/>
+ <o:File HRef="slide0002_image018.png"/>
+ <o:File HRef="slide0002_image019.png"/>
+ <o:File HRef="slide0002_image020.png"/>
+ <o:File HRef="slide0002_image021.png"/>
+ <o:File HRef="slide0002_image022.png"/>
+ <o:File HRef="slide0002_image023.png"/>
+ <o:File HRef="slide0002_image024.png"/>
+ <o:File HRef="slide0002_image025.png"/>
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+ <o:File HRef="slide0002_image027.png"/>
+ <o:File HRef="slide0002_image028.png"/>
+ <o:File HRef="slide0002_image029.png"/>
+ <o:File HRef="slide0002_image030.png"/>
+ <o:File HRef="slide0002_image031.png"/>
+ <o:File HRef="slide0002_image032.png"/>
+ <o:File HRef="slide0002_image033.png"/>
+ <o:File HRef="slide0002_image034.png"/>
+ <o:File HRef="slide0002_image035.png"/>
+ <o:File HRef="slide0002_image036.png"/>
+ <o:File HRef="slide0002_image037.png"/>
+ <o:File HRef="slide0002_image038.png"/>
+ <o:File HRef="slide0002_image039.png"/>
+ <o:File HRef="slide0002_image040.png"/>
+ <o:File HRef="slide0002_image041.png"/>
+ <o:File HRef="slide0002_image042.png"/>
+ <o:File HRef="slide0002_image043.png"/>
+ <o:File HRef="slide0002_image044.png"/>
+ <o:File HRef="slide0002_image045.png"/>
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+ <o:File HRef="slide0002_image048.png"/>
+ <o:File HRef="slide0002_image049.png"/>
+ <o:File HRef="slide0002_image050.png"/>
+ <o:File HRef="slide0002_image051.png"/>
+ <o:File HRef="slide0002_image052.png"/>
+ <o:File HRef="slide0002_image053.png"/>
+ <o:File HRef="slide0003.htm"/>
+ <o:File HRef="slide0003_image054.png"/>
+ <o:File HRef="slide0003_image055.png"/>
+ <o:File HRef="slide0003_image056.png"/>
+ <o:File HRef="slide0003_image057.png"/>
+ <o:File HRef="slide0003_image058.png"/>
+ <o:File HRef="slide0003_image059.png"/>
+ <o:File HRef="slide0003_image060.png"/>
+ <o:File HRef="slide0003_image061.png"/>
+ <o:File HRef="slide0003_image062.png"/>
+ <o:File HRef="slide0004.htm"/>
+ <o:File HRef="slide0004_image063.png"/>
+ <o:File HRef="slide0004_image064.png"/>
+ <o:File HRef="slide0004_image065.png"/>
+ <o:File HRef="slide0005.htm"/>
+ <o:File HRef="slide0005_image066.png"/>
+ <o:File HRef="slide0005_image067.png"/>
+ <o:File HRef="slide0005_image068.png"/>
+ <o:File HRef="slide0005_image069.png"/>
+ <o:File HRef="slide0005_image070.png"/>
+ <o:File HRef="slide0006.htm"/>
+ <o:File HRef="slide0006_image071.png"/>
+ <o:File HRef="slide0006_image072.png"/>
+ <o:File HRef="slide0007.htm"/>
+ <o:File HRef="slide0007_image073.png"/>
+ <o:File HRef="slide0007_image075.png"/>
+ <o:File HRef="slide0008.htm"/>
+ <o:File HRef="slide0008_image076.png"/>
+ <o:File HRef="slide0008_image077.png"/>
+ <o:File HRef="slide0009.htm"/>
+ <o:File HRef="slide0009_image078.png"/>
+ <o:File HRef="slide0009_image079.png"/>
+ <o:File HRef="slide0009_image080.png"/>
+ <o:File HRef="slide0010.htm"/>
+ <o:File HRef="slide0010_image082.png"/>
+ <o:File HRef="slide0010_image083.png"/>
+ <o:File HRef="slide0010_image084.png"/>
+ <o:File HRef="slide0010_image085.png"/>
+ <o:File HRef="slide0010_image086.png"/>
+ <o:File HRef="slide0011.htm"/>
+ <o:File HRef="slide0011_image087.png"/>
+ <o:File HRef="slide0011_image088.png"/>
+ <o:File HRef="slide0012.htm"/>
+ <o:File HRef="slide0013.htm"/>
+ <o:File HRef="slide0014.htm"/>
+ <o:File HRef="master03_stylesheet.css"/>
+ <o:File HRef="master05_stylesheet.css"/>
+ <o:File HRef="slide0015.htm"/>
+ <o:File HRef="slide0016.htm"/>
+ <o:File HRef="slide0017.htm"/>
+ <o:File HRef="slide0018.htm"/>
+ <o:File HRef="slide0019.htm"/>
+ <o:File HRef="slide0020.htm"/>
+ <o:File HRef="slide0021.htm"/>
+ <o:File HRef="slide0022.htm"/>
+ <o:File HRef="slide0023.htm"/>
+ <o:File HRef="slide0024.htm"/>
+ <o:File HRef="slide0025.htm"/>
+ <o:File HRef="slide0026.htm"/>
+ <o:File HRef="slide0027.htm"/>
+ <o:File HRef="slide0028.htm"/>
+ <o:MainFile HRef="::webqtl_demo2.ppt.htm"/>
+ <o:File HRef="error.htm"/>
+ <o:File HRef="frame.htm"/>
+ <o:File HRef="next_active.gif"/>
+ <o:File HRef="next_disabled.gif"/>
+ <o:File HRef="prev_active.gif"/>
+ <o:File HRef="prev_disabled.gif"/>
+ <o:File HRef="outline_collapse.gif"/>
+ <o:File HRef="outline_expand.gif"/>
+ <o:File HRef="notes_flag.gif"/>
+ <o:File HRef="fullscr.gif"/>
+ <o:File HRef="fullscrClose.gif"/>
+ <o:File HRef="narration.gif"/>
+ <o:File HRef="navbg.gif"/>
+ <o:File HRef="outline.gif"/>
+ <o:File HRef="space.gif"/>
+ <o:File HRef="blank_notes.htm"/>
+ <o:File HRef="endshow.htm"/>
+ <o:File HRef="navigation_bar.htm"/>
+ <o:File HRef="fullscreen.htm"/>
+ <o:File HRef="fs_navigation_bar.htm"/>
+ <o:File HRef="outline_navigation_bar.htm"/>
+ <o:File HRef="outline_collapsed.htm"/>
+ <o:File HRef="outline_expanded.htm"/>
+ <o:File HRef="slide0001_notes_pane.htm"/>
+ <o:File HRef="slide0002_notes_pane.htm"/>
+ <o:File HRef="slide0003_notes_pane.htm"/>
+ <o:File HRef="slide0004_notes_pane.htm"/>
+ <o:File HRef="slide0005_notes_pane.htm"/>
+ <o:File HRef="slide0006_notes_pane.htm"/>
+ <o:File HRef="slide0007_notes_pane.htm"/>
+ <o:File HRef="slide0008_notes_pane.htm"/>
+ <o:File HRef="slide0009_notes_pane.htm"/>
+ <o:File HRef="slide0010_notes_pane.htm"/>
+ <o:File HRef="slide0011_notes_pane.htm"/>
+ <o:File HRef="slide0014_notes_pane.htm"/>
+ <o:File HRef="slide0029.htm"/>
+ <o:File HRef="slide0030.htm"/>
+ <o:File HRef="slide0031.htm"/>
+ <o:File HRef="slide0032.htm"/>
+ <o:File HRef="slide0033.htm"/>
+ <o:File HRef="slide0034.htm"/>
+ <o:File HRef="slide0035.htm"/>
+ <o:File HRef="slide0036.htm"/>
+ <o:File HRef="slide0037.htm"/>
+ <o:File HRef="slide0038.htm"/>
+ <o:File HRef="slide0039.htm"/>
+ <o:File HRef="slide0040.htm"/>
+ <o:File HRef="slide0041.htm"/>
+ <o:File HRef="slide0042.htm"/>
+ <o:File HRef="script.js"/>
+ <o:File HRef="filelist.xml"/>
+</xml>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/frame.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/frame.htm
new file mode 100755
index 00000000..5aa0f55d
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/frame.htm
@@ -0,0 +1,43 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script><script language=JavaScript><!--
+base = parent;//-->
+</script><script language=JavaScript src=script.js></script>
+</head>
+<script> <!--
+function getSlideName() {
+	return parent.GetHrefObj( parent.g_currentSlide ).m_slideHref;
+}
+
+function getNotesName() {
+	return parent.GetHrefObj( parent.g_currentSlide ).m_notesHref;
+}
+
+function restore() {
+	self.location.reload();
+}
+
+function WriteMe() {
+	if ( true )
+ 	  document.write( '<frameset cols=\"20%,*\" id=PPTHorizAdjust >' +
+	  '<frame src=\"outline_collapsed.htm\" name=PPTOtl>' );
+	  var distribution;
+	if ( parent.includeNotes ) 
+		distribution = "*,20%";
+	else 
+		distribution = "*,0";		
+	document.write('<frameset rows=\"' + distribution + '\" id=PPTVertAdjust >' +
+	'<frame src=' + getSlideName() + ' name=PPTSld>' +
+	'<frame src=' + getNotesName() + ' name=PPTNts>' );
+	document.write('</frameset>');
+	if ( true )
+	  document.write(' </frameset>' );
+}
+
+if ( parent.msie < 0 ) {
+	self.onresize = restore;
+}
+
+WriteMe();
+//-->
+</script>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/fs_navigation_bar.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/fs_navigation_bar.htm
new file mode 100755
index 00000000..8f728017
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/fs_navigation_bar.htm
@@ -0,0 +1,84 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<title>Navigation Bar</title>
+<script>
+<!--
+function restore() {
+if( navigator.platform != "MacPPC" )
+	self.location.reload();
+}
+	mainWin = parent.base;
+	dad = parent;
+function WriteBody()
+{
+   if( window.name != "PPTNav" ) return;
+	
+  document.writeln( '<table border=0 valign=top cellpadding=0 cellspacing=0 height=100% width=100%> <tr>  <td align=center valign=top> <table border=0 valign=top cellpadding=0 cellspacing=0 height=100%><tr><td align=right valign=top>' );
+ if ( dad.g_hideNav != 1 ) {
+  innerText = "";
+  if ( mainWin.GetHrefObj( mainWin.g_currentSlide ).m_origVisibility == 1 && !mainWin.g_allHidden)
+    innerText = "Slide " + mainWin.GetCurrentSlideNum() + " of " + mainWin.GetNumSlides();
+  else
+    innerText = "Hidden Slide";
+  if( dad.gIsEndShow )
+  	innerText = "End of Slide Show";
+  	  
+fEnable = dad.M_HasPrevSld();
+  if( false || fEnable )
+  {
+    prevBtn = "prev_active.gif";
+    document.write( '<a onclick="if(event) event.cancelBubble=true"  href="javascript:dad.M_GoPrevSld()" >' );
+  }
+  else
+    prevBtn = "prev_disabled.gif";
+  
+  document.write( '<img src="' + prevBtn + '" border=0 alt="Previous Slide" title="Previous Slide">' );
+
+var textAlign;
+ if ( false )
+ 	textAlign = 'top';
+ else
+ 	textAlign = 'center';
+ 		
+  if( false || fEnable )
+    document.write( '</a>' );
+
+  document.write( '</td><td align=center valign=' + textAlign + '> &nbsp &nbsp <font face=\"Arial\" color=#000000 size=2>' + innerText + '</font>  &nbsp &nbsp </td><td align=left valign=top>' );
+
+
+fEnable = (!dad.gIsEndShow && mainWin.EndSlideShow) || (!mainWin.EndSlideShow &&( mainWin.GetCurrentSlideNum() != mainWin.GetNumSlides() ) );
+  if(  false || fEnable )
+  {
+    nextBtn = "next_active.gif";
+    document.write( '<a onclick="if(event) event.cancelBubble=true"  href="javascript:dad.M_GoNextSld()" >' );
+  }
+  else
+    nextBtn = "next_disabled.gif";
+  document.write( '<img src="' + nextBtn + '" border=0 alt="Next Slide" title="Next Slide">' );
+
+  if( false ||  fEnable )
+    document.write( '</a>' );
+  document.write( '</td> </tr></table> </td>  <td align=right valign=top>' );
+  document.write( '<a onclick="if(event) event.cancelBubble=true"  href="javascript:mainWin.CloseFullScreen()" > ' );
+   document.write( '<img src="fullscrClose.gif"border=0 alt="Close" title="Close">');
+   document.write( ' </a>' );
+  }
+  document.write( '</td> </tr></table>' );
+}
+if ( mainWin.msie < 0 ) {
+	document.captureEvents(Event.MOUSEDOWN);
+	document.onmousedown = handleClick;
+}
+
+function handleClick(event) {
+	if ( event.which == 3 )
+		return false;
+	return true;
+}
+//-->
+</script>
+
+</head>
+<body background=navbg.gif topmargin=2 onresize="restore()" scroll="no" 
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+	window.location.replace( "endshow.htm" );
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+  <td width=100%  id="p1" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('1')" id=AREF>The GeneNetwork and WebQTL :
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+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID2 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
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+  href="javascript:parent.base.Slide('2')" id=AREF>Slide 2</a></b></font></td>
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+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID3 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
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+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID5 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p5" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('5')" id=AREF>WebQTL searches for upstream
+  controllers</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID6 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p6" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('6')" id=AREF>Genetic versus Physical maps
+  for App expression</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID7 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p7" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('7')" id=AREF>Physical map for distal
+  chromosome 7</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID8 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p8" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('8')" id=AREF>Evaluating candidate genes</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID9 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p9" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('9')" id=AREF>Physical maps are zoomable</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID10 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p10" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('10')" id=AREF>Evaluating Ctbp2 as a
+  candidate QTL for App</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID11 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p11" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('11')" id=AREF>Evaluating Ctbp2 using
+  other resources</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID12 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p12" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('12')" id=AREF>&quot;Summary of Part 2&quot;</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID13 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p13" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('13')" id=AREF>Test Questions</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID14 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p14" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('14')" id=AREF>Contact for comments and
+  improvements:</a></b></font></td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/outline_expand.gif b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/outline_expand.gif
new file mode 100755
index 00000000..c8c72b13
--- /dev/null
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diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/outline_expanded.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/outline_expanded.htm
new file mode 100755
index 00000000..c33cf334
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/outline_expanded.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Robots content=NoIndex>
+<style>
+<!--a {text-decoration: none;}-->
+</style>
+</head>
+<body bgcolor=black text=white link=white vlink=white alink=white
+onload=" parent.base.highlite();" onresize="self.location.reload();">
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID1 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p1" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('1')" id=AREF>The GeneNetwork and WebQTL :
+  PART 2<span style="mso-spacerun: yes">&nbsp;&nbsp; </span><br>
+  link to www.genenetwork.org</a></b></font></td>
+ </tr>
+</table>
+<table>
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>Part 1. How to study expression
+  variation and genetic correlation (slides 2&#8211;17)</font></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>Part 2. Discovering upstream modulators
+  (slides 18&#8211;29)</font></td>
+ </tr>
+</table>
+<br>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID2 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p2" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('2')" id=AREF>Slide 2</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID3 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p3" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('3')" id=AREF>Slide 3</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID4 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p4" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('4')" id=AREF><font face=Verdana>Discovering
+  upstream modulatory loci</font></a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID5 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p5" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('5')" id=AREF>WebQTL searches for upstream
+  controllers</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID6 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p6" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('6')" id=AREF>Genetic versus Physical maps
+  for App expression</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID7 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p7" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('7')" id=AREF>Physical map for distal
+  chromosome 7</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID8 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p8" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('8')" id=AREF>Evaluating candidate genes</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID9 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p9" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('9')" id=AREF>Physical maps are zoomable</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID10 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p10" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('10')" id=AREF>Evaluating Ctbp2 as a
+  candidate QTL for App</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID11 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p11" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('11')" id=AREF>Evaluating Ctbp2 using
+  other resources</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID12 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p12" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('12')" id=AREF>&quot;Summary of Part 2&quot;</a></b></font></td>
+ </tr>
+</table>
+<table>
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>Summary of Part 2</font></td>
+ </tr>
+</table>
+<br>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID13 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p13" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('13')" id=AREF>Test Questions</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID14 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p14" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('14')" id=AREF>Contact for comments and
+  improvements:</a></b></font></td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/outline_navigation_bar.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/outline_navigation_bar.htm
new file mode 100755
index 00000000..85b11c52
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/outline_navigation_bar.htm
@@ -0,0 +1,37 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script><script language=JavaScript><!--
+
+function restore() {
+if( navigator.platform != "MacPPC" )
+	self.location.reload();
+}
+
+function writebody() {
+
+	if ( parent.g_showoutline ) {
+			document.write('<table border=0 valign=top cellspacing=0 width=\"100%\">' + 
+			'<tr valign=top><td align=left valign=top>' );
+			  document.write( '<a href=\"javascript:parent.ToggleOutline()\" ><img src=\"outline.gif\" title=\"Show/Hide Outline\" alt=\"Show/Hide Outline\" border=0></a>' );
+			  document.write( '</td>' );
+		if( parent.g_outline_href == parent.OUTLINE_EXPAND_HREF ) {
+			document.write( '<td align=right valign=top><a href=\"javascript:parent.CollapseOutline()\">' +
+			'<img src="outline_collapse.gif" title="Collapse Outline" alt="Collapse Outline" border=0>' +  
+			'</a></td>');
+		} else {
+			document.write('<td align=right valign=top><a href=\"javascript:parent.ExpandOutline()\">' +
+			'<img src="outline_expand.gif" title="Expand Outline" alt="Expand Outline" border=0>' + 
+			 '</a></td>');
+		}
+		document.write("</tr></table>");
+	}
+	else {
+			document.write( '<table border=0 valign=top cellspacing=0 width=\"100%\"><td align=\"left\"><a href=\"javascript:parent.ToggleOutline()\" ><img border=0 src=\"outline.gif\" title=\"Show/Hide Outline\" alt=\"Show/Hide Outline\"></a></td></table>' );
+	}
+}//-->
+</script>
+</head>
+<body background=navbg.gif topmargin=1 onresize="restore()" scroll="no" >
+<script language=JavaScript><!--
+writebody();
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/prev_active.gif b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/prev_active.gif
new file mode 100755
index 00000000..004a872f
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/prev_active.gif
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/prev_disabled.gif b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/prev_disabled.gif
new file mode 100755
index 00000000..8a467185
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diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/script.js b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/script.js
new file mode 100755
index 00000000..8110ab9a
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/script.js
@@ -0,0 +1,1343 @@
+var CtxAlwaysOn = false;
+function LoadSld( slideId )
+{
+	if( !g_supportsPPTHTML ) return
+	if( slideId )
+		parent.base.SldUpdated(slideId)
+	g_origSz=parseInt(SlideObj.style.fontSize)
+	g_origH=SlideObj.style.posHeight
+	g_origW=SlideObj.style.posWidth
+	g_scaleHyperlinks=(document.all.tags("AREA").length>0)
+	if ( IsWin("PPTSld") && !parent.IsFullScrMode() )
+		parent.base.highlite();	
+	if( g_scaleHyperlinks )
+		InitHLinkArray()
+	if( g_scaleInFrame||(IsWin("PPTSld") && parent.IsFullScrMode() ) )
+		document.body.scroll="no"
+	_RSW()
+	if( IsWin("PPTSld") && (parent.IsFullScrMode() || CtxAlwaysOn ) )	{
+		document.oncontextmenu=parent._CM;
+	self.focus(); 
+
+	}
+}
+function MakeSldVis( fTrans ) 
+{
+	fTrans=fTrans && g_showAnimation
+	if( fTrans )
+	{
+		if( g_bgSound ) {
+			idx=g_bgSound.indexOf(",");
+			pptSound.src=g_bgSound.substr( 0, idx );
+			pptSound.loop= -(parseInt(g_bgSound.substr(idx+1)));
+		}
+		SlideObj.filters.revealtrans.Apply()
+	}
+	SlideObj.style.visibility="visible"
+	if( fTrans )
+		SlideObj.filters.revealtrans.Play()
+}
+function MakeNotesVis() 
+{
+	if( !IsNts() ) return false 
+	SlideObj.style.display="none"
+	nObj = document.all.item("NotesObj")
+	parent.SetHasNts(0)
+	if( nObj ) { 
+		nObj.style.display=""
+		parent.SetHasNts(1)
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+	return 1
+}
+function Redirect( frmId,sId )
+{
+	var str=document.location.hash,idx=str.indexOf('#')
+	if(idx>=0) str=str.substr(1);
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+		obj = document.all.item("Main-File")
+		window.location.href=obj.href+"#"+sId
+		return 1
+	}
+	return 0
+}
+function HideMenu() { if( frames["PPTSld"] && PPTSld.document.all.item("ctxtmenu") && PPTSld.ctxtmenu.style.display!="none" ) { PPTSld.ctxtmenu.style.display='none'; return true } return false }
+function IsWin( name ) { return window.name == name }
+function IsNts() { return IsWin("PPTNts") }
+function IsSldOrNts() { return( IsWin("PPTSld")||IsWin("PPTNts") ) }
+function SupportsPPTAnimation() { return( navigator.platform == "Win32" && navigator.appVersion.indexOf("Windows")>0 ) }
+function SupportsPPTHTML()
+{
+	var appVer=navigator.appVersion, msie=appVer.indexOf( "MSIE " ), inex = appVer.indexOf( "Internet Explorer " ), ver=0
+	if( msie >= 0 )
+		ver=parseFloat( appVer.substring( msie+5, appVer.indexOf(";",msie) ) )
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+		ver=parseFloat( appVer.substring( inex+18, appVer.indexOf(";",inex) ) )
+	else
+		ver=parseInt(appVer)
+
+	return( ver >= 4  )
+}
+var MHTMLPrefix = CalculateMHTMLPrefix(); 
+function CalculateMHTMLPrefix()
+{
+	if ( document.location.protocol == 'mhtml:') { 
+		href=new String(document.location.href) 
+		Start=href.indexOf('!')+1 
+		End=href.lastIndexOf('/')+1 
+		if (End < Start) 
+			return href.substring(0, Start) 
+		else 
+		return href.substring(0, End) 
+	}
+	return '';
+}
+
+function LoadNavSld(slideId) {
+playList();
+parent.createCM();
+	if( !g_supportsPPTHTML ) return
+	if( IsWin("PPTSld") && slideId )
+		parent.base.SldUpdated(slideId)
+	self.focus(); 
+
+}
+var hasNarration = false;
+function _RSW()
+{
+	if( !g_supportsPPTHTML || IsNts() ||
+	  ( !g_scaleInFrame && (( window.name != "PPTSld" ) ) ) )
+		return
+
+	cltWidth=document.body.clientWidth
+	cltHeight=document.body.clientHeight
+	factor=(1.0*cltWidth)/g_origW
+	if( cltHeight < g_origH*factor )
+		factor=(1.0*cltHeight)/g_origH
+
+	newSize = g_origSz * factor
+	if( newSize < 1 ) newSize=1
+
+	s=SlideObj.style
+	s.fontSize=newSize+"px"
+	s.posWidth=g_origW*factor
+	s.posHeight=g_origH*factor
+	s.posLeft=(cltWidth-s.posWidth)/2
+	s.posTop=(cltHeight-s.posHeight)/2
+
+	if ( hasNarration ) {
+		obj = document.all.NSPlay.style;
+		mySld = document.all.SlideObj.style;
+		obj.position = 'absolute';
+		obj.posTop = mySld.posTop + mySld.posHeight - 20;
+		obj.posLeft = mySld.posLeft + mySld.posWidth - 20;
+	}
+	if( g_scaleHyperlinks )
+		ScaleHyperlinks( factor );	
+}
+function IsMac() {
+	return (window.navigator.platform.indexOf("Mac") >= 0 );
+}
+
+function HitOK( evt ) {
+	//Nav Only function
+	return (evt.which == 1 || (IsMac() && evt.which == 3) );
+}
+function _KPH(event)
+{ 
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+  if ( parent.base.msie < 0 )  {
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+		return parent.KPH(event);
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+	      parent.PPTSld.DocumentOnClick();
+	    else
+	      parent.M_GoNextSld();
+      }	
+      else if ( parent.IsFullScrMode() && ((event.which == 78)  || (event.which == 110) || (event.which == 29) || (event.which == 31) || (event.which == 12)) )
+  		parent.M_GoNextSld();
+      else if ( parent.IsFullScrMode() && ( (event.which == 80)  || (event.which == 112) || (event.which == 30) || (event.which == 28) || (event.which == 11) || (event.which == 8)) )
+  		parent.M_GoPrevSld();
+
+      return;
+   }
+  	
+  if( IsNts() ) return;
+
+  if(parent.IsFullScrMode()  && event.keyCode == 27 && !parent.HideMenu() )
+    parent.base.CloseFullScreen();
+  else if( (event.keyCode == 32) || (event.keyCode == 13) )
+  {
+    if( window.name == "PPTSld" )
+      parent.PPTSld.DocumentOnClick();
+   else
+      parent.M_GoNextSld();
+  }
+  else if ( parent.IsFullScrMode() && ((event.keyCode == 78)  || (event.keyCode == 110)) )
+  	parent.M_GoNextSld();
+  else if ( parent.IsFullScrMode() && ((event.keyCode == 80)  || (event.keyCode == 112)) )
+  	parent.M_GoPrevSld();
+}
+
+function DocumentOnClick(event)
+{
+		if ( g_doAdvOnClick && !parent.IsFullScrMode() ) {
+			parent.base.TP_GoToNextSld();	
+			return;
+		}
+		
+	if ( parent.base.msie < 0 ) 
+	{
+		if( ( g_allowAdvOnClick  && parent.IsFullScrMode() ) || g_doAdvOnClick ||
+		    (event && ( (event.which == 32) || (event.which == 13) ) ) )
+			parent.M_GoNextSld();
+			return;
+	}		
+	if( IsNts() || (parent.IsFullScrMode() && parent.HideMenu() ) ) return;
+	if( ( g_allowAdvOnClick && parent.IsFullScrMode() ) || g_doAdvOnClick ||
+	    (event && ( (event.keyCode==32) || (event.keyCode == 13) ) ) )
+		parent.M_GoNextSld();
+}
+
+
+var g_supportsPPTHTML = SupportsPPTHTML(), g_scaleInFrame = true, gId="", g_bgSound="",
+    g_scaleHyperlinks = false, g_allowAdvOnClick = true, g_showInBrowser = false, g_doAdvOnClick = false;
+
+ var g_showAnimation = 0;
+var g_hasTrans = false, g_autoTrans = false, g_transSecs = 0;
+var g_animManager = null;
+
+var ENDSHOW_MESG="End of slide show, click to exit.", SCREEN_MODE="Frames", gIsEndShow=0, NUM_VIS_SLDS=14, SCRIPT_HREF="script.js", FULLSCR_HREF="fullscreen.htm";
+var gCurSld = gPrevSld = 1, g_offset = 0, gNtsOpen = gHasNts = gOtlTxtExp = gNarrationPaused = false, gOtlOpen = true
+window.gPPTHTML=SupportsPPTHTML()
+var g_hideNav = 0;
+function UpdNtsPane(){ PPTNts.location.replace( MHTMLPrefix+GetHrefObj( gCurSld ).mNtsHref ) }
+function UpdNavPane( sldIndex ){ if(gNavLoaded) PPTNav.UpdNav() }
+function UpdOtNavPane(){ if(gOtlNavLoaded) PPTOtlNav.UpdOtlNav() }
+function UpdOtlPane(){ if(gOtlLoaded) PPTOtl.UpdOtl() }
+function SetHasNts( fVal )
+{
+	if( gHasNts != fVal ) {
+		gHasNts=fVal
+		UpdNavPane()
+	}
+}
+
+function ToggleVNarration()
+{
+	if ( base.msie < 0 ) {
+		PPTSld.ToggleSound( false, PPTSld.document.NSPlay );
+		return;
+	}
+	
+	rObj=PPTSld.document.all("NSPlay")
+	if( rObj ) {
+		if( gNarrationPaused )
+			rObj.Play()
+		else
+			rObj.Pause()
+
+		gNarrationPaused=!gNarrationPaused
+	}
+}
+
+function PrevSldViewed(){ GoToSld( GetHrefObj(gPrevSld).mSldHref ) }
+function HasPrevSld() { return ( gIsEndShow || ( g_currentSlide != 1 && GetHrefObj( g_currentSlide-1 ).mVis == 1 )||( GetCurrentSlideNum() > 1 ) ) }
+function HasNextSld() { return (GetCurrentSlideNum() != GetNumSlides()) }
+function StartEndShow()
+{
+//	g_hideNav = 1;
+//	PPTNav.location.reload();
+	if( PPTSld.event ) PPTSld.event.cancelBubble=true
+
+	doc=PPTSld.document
+	doc.open()
+	doc.writeln('<html><head><script > /*defer>*/ g_ctxmenu = 0; ' +
+	'if( parent.base.msie < 0 )  { document.captureEvents(Event.KEYPRESS); document.captureEvents(Event.MOUSEDOWN); document.onkeypress = _KPH; document.onmousedown = _KPH; } ' +
+	'function DocumentOnClick(event) { return _KPH(event); }  function IsContextMenu() { return (g_ctxmenu ==1); } ' +
+	'function _KPH(event)' +
+	'{  ' +
+	'if ( parent.base.msie < 0  && (parent.IsFullScrMode() ) && event ) { if ( (!parent.IsMac() && event.which == 3) || ( parent.IsMac() && (event.modifiers & Event.CONTROL_MASK) && event.which == 1 ) )  { return parent.KPH(event); } ' + 
+	' else if (event.which == 27 || event.which == 32 || event.which == 13 || parent.HitOK( event ) || (event.which == 78)  || (event.which == 110) || (event.which == 29) || (event.which == 31) || (event.which == 12) ) { if ( IsContextMenu() ) { return parent.KPH(event); }  parent.base.CloseFullScreen(); return; } ' +
+	' else if ( (event.which == 80)  || (event.which == 112) || (event.which == 30) || (event.which == 28) || (event.which == 11) || (event.which == 8) ) { parent.M_GoPrevSld(); } } ' +
+	'if( parent.HideMenu() ) return; if( (parent.IsFullScrMode() ) && event) { if ( (event.keyCode==27 || event.keyCode == 13 || event.keyCode==32 || event.type=="click" ) || (event.keyCode == 78)  || (event.keyCode == 110) ) { parent.base.CloseFullScreen(); }' +
+	' else if ( (event.keyCode == 80)  || (event.keyCode == 112) ) { parent.M_GoPrevSld(); } } } function Unload() { parent.gIsEndShow=0; } function SetupEndShow() {    if ( !parent.IsFullScrMode() ) { return; } else { parent.PPTNav.location.reload(); }  parent.gIsEndShow=1; if ( parent.g_docTable[0].type != "jpeg" ) { if ( parent.base.msie < 0 ) {parent.createCM(); } document.oncontextmenu=parent._CM; } }</script></head><body scroll=\"no\" onclick=\"DocumentOnClick(event)\" onkeypress=\"_KPH(event)\" bgcolor=\"black\" onload=\"SetupEndShow()\" onunload=\"Unload()\"><center><p><font face=Tahoma color=white size=2><br><b>' + ENDSHOW_MESG + '</b></font></p></center></body></html>')
+	doc.close()
+}
+function SetSldVisited(){ gDocTable[gCurSld-1].mVisited=true }
+function IsSldVisited(){ return gDocTable[gCurSld-1].mVisited }
+function hrefList( sldHref, visible, sldIdx )
+{
+	this.mSldHref= this.mNtsHref = sldHref
+	this.mSldIdx = sldIdx
+	this.mOrigVis= this.mVis = visible
+	this.mVisited= false
+}
+var gDocTable = new Array(
+   new hrefList("slide0001.htm", 1, 1),
+   new hrefList("slide0002.htm", 1, 2),
+   new hrefList("slide0003.htm", 1, 3),
+   new hrefList("slide0004.htm", 1, 4),
+   new hrefList("slide0005.htm", 1, 5),
+   new hrefList("slide0006.htm", 1, 6),
+   new hrefList("slide0007.htm", 1, 7),
+   new hrefList("slide0008.htm", 1, 8),
+   new hrefList("slide0009.htm", 1, 9),
+   new hrefList("slide0010.htm", 1, 10),
+   new hrefList("slide0011.htm", 1, 11),
+   new hrefList("slide0012.htm", 1, 12),
+   new hrefList("slide0013.htm", 1, 13),
+   new hrefList("slide0014.htm", 1, 14)
+);
+
+function ImgBtn( oId,bId,w,action )
+{
+	var t=this
+	t.Perform    = _IBP
+	t.SetActive  = _IBSetA
+ t.SetInactive= _IBSetI
+	t.SetPressed = _IBSetP
+	t.SetDisabled= _IBSetD
+	t.Enabled    = _IBSetE
+	t.ChangeIcon = null
+	t.UserAction = action
+	t.ChgState   = _IBUI
+	t.mObjId   = oId
+	t.mBorderId= bId
+	t.mWidth   = w
+	t.mIsOn    = t.mCurState = 0
+}
+function _IBSetA()
+{
+	if( this.mIsOn ) {
+		obj=this.ChgState( gHiliteClr,gShadowClr,2 )
+		obj.style.posTop=0
+	}
+}
+function _IBSetI()
+{
+	if( this.mIsOn ) {
+		obj=this.ChgState( gFaceClr,gFaceClr,1 )
+		obj.style.posTop=0 
+	}
+}
+function _IBSetP()
+{
+	if( this.mIsOn ) {
+		obj=this.ChgState( gShadowClr,gHiliteClr,2 )
+		obj.style.posLeft+=1; obj.style.posTop+=1
+	}
+}
+function _IBSetD()
+{  
+	obj=this.ChgState( gFaceClr,gFaceClr,0 )
+	obj.style.posTop=0 
+}
+function _IBSetE( state )
+{
+	var t=this
+	GetObj( t.mBorderId ).style.visibility="visible"
+	if( state != t.mIsOn ) {
+		t.mIsOn=state
+		if( state )
+			t.SetInactive()
+		else
+			t.SetDisabled()
+	}
+}
+function _IBP()
+{
+	var t=this
+	if( t.mIsOn ) {
+		if( t.UserAction != null )
+			t.UserAction()
+		if( t.ChangeIcon ) {
+			obj=GetObj(t.mObjId)
+			if( t.ChangeIcon() )
+				obj.style.posLeft=obj.style.posLeft+(t.mCurState-4)*t.mWidth
+			else
+				obj.style.posLeft=obj.style.posLeft+(t.mCurState-0)*t.mWidth
+		}
+		t.SetActive()
+	}  
+}
+function _IBUI( clr1,clr2,nextState )
+{
+	var t=this
+	SetBorder( GetObj( t.mBorderId ),clr1,clr2 )
+	obj=GetObj( t.mObjId )
+	obj.style.posLeft=obj.style.posLeft+(t.mCurState-nextState)*t.mWidth-obj.style.posTop
+	t.mCurState=nextState
+	return obj
+}
+function TxtBtn( oId,oeId,action,chkState )
+{
+	var t=this
+	t.Perform    = _TBP
+	t.SetActive  = _TBSetA
+	t.SetInactive= _TBSetI
+	t.SetPressed = _TBSetP
+	t.SetDisabled= _TBSetD
+	t.SetEnabled = _TBSetE
+	t.GetState   = chkState
+	t.UserAction = action
+	t.ChgState   = _TBUI
+	t.mObjId      = oId
+	t.m_elementsId= oeId
+	t.mIsOn       = 1
+}
+function _TBSetA()
+{
+	var t=this
+	if( t.mIsOn && !t.GetState() )
+		t.ChgState( gHiliteClr,gShadowClr,0,0 )
+}
+function _TBSetI()
+{
+	var t=this
+	if( t.mIsOn && !t.GetState() )
+		t.ChgState( gFaceClr,gFaceClr,0,0 )
+}
+function _TBSetP()
+{
+	if( this.mIsOn )
+		this.ChgState( gShadowClr,gHiliteClr,1,1 )
+}
+function _TBSetD()
+{   
+	this.ChgState( gFaceClr,gFaceClr,0,0 )
+	this.mIsOn = 0
+}
+function _TBSetE()
+{
+	var t=this
+	if( !t.GetState() )
+		t.ChgState( gFaceClr,gFaceClr,0,0 )
+	else
+		t.ChgState( gShadowClr,gHiliteClr,1,1 )
+	t.mIsOn = 1
+}
+function _TBP()
+{
+	var t=this
+	if( t.mIsOn ) { 
+		if( t.UserAction != null )
+			t.UserAction()
+		if( t.GetState() )
+			t.SetPressed()
+		else
+			t.SetActive()
+	}  
+}
+function _TBUI( clr1,clr2,lOffset,tOffset )
+{
+	SetBorder( GetObj( this.mObjId ),clr1,clr2 )
+	Offset( GetObj( this.m_elementsId ),lOffset,tOffset )
+}
+function GetObj( objId ){ return document.all.item( objId ) }
+function Offset( obj, top, left ){ obj.style.top=top; obj.style.left=left }
+function SetBorder( obj, upperLeft, lowerRight )
+{
+	s=obj.style;
+	s.borderStyle      = "solid"
+	s.borderWidth      = 1 
+	s.borderLeftColor  = s.borderTopColor = upperLeft
+	s.borderBottomColor= s.borderRightColor = lowerRight
+}
+function GetBtnObj(){ return gBtnArr[window.event.srcElement.id] }
+function BtnOnOver(){ b=GetBtnObj(); if( b != null ) b.SetActive() }
+function BtnOnDown(){ b=GetBtnObj(); if( b != null ) b.SetPressed() }
+function BtnOnOut(){ b=GetBtnObj(); if( b != null ) b.SetInactive() }
+function BtnOnUp()
+{
+	b=GetBtnObj()
+	if( b != null )
+		b.Perform()
+	else
+		Upd()
+}
+function GetNtsState(){ return parent.gNtsOpen }
+function GetOtlState(){ return parent.gOtlOpen }
+function GetOtlTxtState(){ return parent.gOtlTxtExp }
+function NtsBtnSetFlag( fVal )
+{
+	s=document.all.item( this.m_flagId ).style
+	s.display="none"
+	if( fVal )
+		s.display=""
+	else
+		s.display="none"
+}
+
+var gHiliteClr="THREEDHIGHLIGHT",gShadowClr="THREEDSHADOW",gFaceClr="THREEDFACE"
+var gBtnArr = new Array()
+gBtnArr["nb_otl"] = new TxtBtn( "nb_otl","nb_otlElem",parent.ToggleOtlPane,GetOtlState )
+gBtnArr["nb_nts"] = new TxtBtn( "nb_nts","nb_ntsElem",parent.ToggleNtsPane,GetNtsState )
+gBtnArr["nb_prev"]= new ImgBtn( "nb_prev","nb_prevBorder",30,parent.GoToPrevSld )
+gBtnArr["nb_next"]= new ImgBtn( "nb_next","nb_nextBorder",30,parent.GoToNextSld )
+gBtnArr["nb_sldshw"]= new ImgBtn( "nb_sldshw","nb_sldshwBorder",18,parent.FullScreen )
+gBtnArr["nb_voice"]  = new ImgBtn( "nb_voice","nb_voiceBorder",18,parent.ToggleVNarration )
+gBtnArr["nb_otlTxt"]= new ImgBtn( "nb_otlTxt","nb_otlTxtBorder",23,parent.ToggleOtlText )
+gBtnArr["nb_nts"].m_flagId= "notes_flag"
+gBtnArr["nb_nts"].SetFlag = NtsBtnSetFlag
+gBtnArr["nb_otlTxt"].ChangeIcon= GetOtlTxtState
+var sNext="Next",sPrev="Previous",sEnd="End Show",sFont="Arial", alwaysOn = false
+function ShowMenu()
+{
+	BuildMenu();
+	var doc=PPTSld.document.body,x=PPTSld.event.clientX+doc.scrollLeft,y=PPTSld.event.clientY+doc.scrollTop
+
+	m = PPTSld.document.all.item("ctxtmenu")
+	m.style.pixelLeft=x
+	if( (x+m.scrollWidth > doc.clientWidth)&&(x-m.scrollWidth > 0) )
+		m.style.pixelLeft=x-m.scrollWidth
+
+	m.style.pixelTop=y
+	if( (y+m.scrollHeight > doc.clientHeight)&&(y-m.scrollHeight > 0) )
+		m.style.pixelTop=y-m.scrollHeight
+
+	m.style.display=""
+}
+function _CM()
+{
+	if( !parent.IsFullScrMode() && !alwaysOn) return;
+	
+	if(!PPTSld.event.ctrlKey) {
+		ShowMenu()
+		return false
+	} else
+		HideMenu()
+}
+
+function processNavKPH(event) {
+   if ( PPTSld &&  (event.keyCode != 13 || !event.srcElement.href || event.srcElement.href == "" ) )
+	return PPTSld._KPH(event);
+}
+function processNavClick() {
+	HideMenu();
+	return true;
+}
+function BuildMenu()
+{
+	if( PPTSld.document.all.item("ctxtmenu") ) return
+
+	var mObj=CreateItem( PPTSld.document.body )
+mObj.id="ctxtmenu"
+	var s=mObj.style
+	s.position="absolute"
+ s.cursor="default"
+	s.width="100px"
+	SetCMBorder(mObj,"menu","black")
+
+	var iObj=CreateItem( mObj )
+	SetCMBorder( iObj, "threedhighlight","threedshadow" )
+	iObj.style.padding=2
+	if ( self.IsFullScrMode() ) {
+		CreateMenuItem( iObj,sNext,M_GoNextSld,M_True )
+		CreateMenuItem( iObj,sPrev,M_GoPrevSld,M_HasPrevSld )
+	}
+	else {
+		CreateMenuItem( iObj,sNext, base.TP_GoToNextSld, base.HasNextSld )
+		CreateMenuItem( iObj,sPrev,base.GoToPrevSld, base.HasPrevSld )
+	}
+	var sObj=CreateItem( iObj )
+	SetCMBorder(sObj,"menu","menu")
+	var s=sObj.style
+	s.borderTopColor="threedshadow"
+	s.borderBottomColor="threedhighlight"
+	s.height=1
+	s.fontSize="0px"
+	if ( self.IsFullScrMode() ) 
+		CreateMenuItem( iObj,sEnd,M_End,M_True )
+	else
+		CreateMenuItem( iObj,sEnd,M_End,M_False )
+}
+function Highlight() { ChangeClr("activecaption","threedhighlight") }
+function Deselect() { ChangeClr("threedface","menutext") }
+function Perform()
+{
+	e=PPTSld.event.srcElement
+	if( e.type=="menuitem" && e.IsActive() )
+		e.Action()
+	else
+		PPTSld.event.cancelBubble=true
+}
+function ChangeClr( bg,clr )
+{
+	e=PPTSld.event.srcElement
+	if( e.type=="menuitem" && e.IsActive() ) {
+		e.style.backgroundColor=bg
+		e.style.color=clr
+	}
+}
+
+function M_HasPrevSld() { return( base.HasPrevSld() ) }
+function M_GoNextSld() { 
+	base.SetFSMode(1);
+	if( gIsEndShow )
+		 M_End();
+	else {
+		if ( base.HasNextSld() )
+		 base.GoToNextSld();
+		else if (  base.EndSlideShow ) {
+		 StartEndShow();
+		 gIsEndShow = 1;
+		 
+		 PPTNav.location.reload();
+		}
+		else
+			base.CloseFullScreen();
+	}
+}
+function M_GoPrevSld() {
+	base.SetFSMode(1);
+	g_hideNav = 0;
+	if( gIsEndShow ) { 
+		gIsEndShow = 0;
+		if ( base.msie > 0 && IsMac() ) 
+			ChangeFrame( SLIDE_FRAME, GetHrefObj( g_currentSlide ).m_slideHref );
+		else	
+		PPTSld.history.back();
+		
+		 PPTNav.location.reload();
+		if( PPTSld.event )
+			 PPTSld.event.cancelBubble=true;
+	}
+	else
+	 	base.GoToPrevSld();
+}
+function M_True() { return true }
+function M_False() { return false }
+
+function M_End() {
+	base.CloseFullScreen();
+	/*PPTSld.event.cancelBubble=true;
+	window.close( self )*/
+}
+
+function CreateMenuItem( node,text,action,eval )
+{
+	var e=CreateItem( node )
+	e.type="menuitem"
+	e.Action=action
+	e.IsActive=eval
+	e.innerHTML=text
+
+	if( !e.IsActive() )
+		e.style.color="threedshadow"
+	e.onclick=Perform
+	e.onmouseover=Highlight
+	e.onmouseout=Deselect
+	s=e.style;
+	s.fontFamily=sFont
+	s.fontSize="8pt"
+	s.paddingLeft=2
+}
+function CreateItem( node )
+{
+	var elem=PPTSld.document.createElement("DIV")
+	node.insertBefore( elem )
+	return elem
+}
+function SetCMBorder( o,ltClr,rbClr )
+{
+	var s=o.style
+	s.backgroundColor="menu"
+	s.borderStyle="solid"
+	s.borderWidth=1
+	s.borderColor=ltClr+" "+rbClr+" "+rbClr+" "+ltClr
+}
+
+/* netscape context menu */
+g_ctxmenu = 0;
+function setRect( obj, X, Y, W, H ) {
+	obj.top = Y;
+	obj.left = X;
+	obj.clip.top = 0;
+	obj.clip.left = 0;
+	obj.clip.bottom = H;
+	obj.clip.right = W;
+}	
+
+function KPH(event) {
+	if ( ! base.IsFullScrMode() && !alwaysOn )
+		return true;
+		
+	if ( (!IsMac() &&event.which == 3) || ( IsMac() && (event.modifiers & Event.CONTROL_MASK) && event.which == 1 )   ) {
+		PPTSld.g_ctxmenu = 1;
+		PPTSld.stripUobj.visibility = "show";
+		PPTSld.stripDobj.visibility = "show";
+		PPTSld.shadeUobj.visibility = "show";
+		PPTSld.shadeDobj.visibility = "show";
+		PPTSld.panelobj.visibility = "show";
+		PPTSld.Fobj.visibility = "show";
+		PPTSld.Bobj.visibility = "show";
+		PPTSld.Eobj.visibility = "show";
+
+		setRect(PPTSld.shadeUobj, event.pageX-2, event.pageY-2, 82, 67 );		
+		setRect(PPTSld.shadeDobj, event.pageX, event.pageY, 82, 67 );		
+		setRect(PPTSld.panelobj, event.pageX, event.pageY, 80, 65 );		
+		setRect(PPTSld.Fobj, event.pageX, event.pageY, 80, 20 );
+		setRect(PPTSld.Bobj, event.pageX, event.pageY+20, 80, 20 );
+		setRect(PPTSld.stripUobj, event.pageX, event.pageY+41, 80, 1 );		
+		setRect(PPTSld.stripDobj, event.pageX, event.pageY+43, 80, 1 );		
+		setRect(PPTSld.Eobj, event.pageX, event.pageY+45, 80, 20 );
+		return false;
+	}
+	if ( HitOK( event ) ) {
+	PPTSld.g_ctxmenu = 0;
+		PPTSld.stripUobj.visibility = "hide";
+		PPTSld.stripDobj.visibility = "hide";
+		PPTSld.shadeUobj.visibility = "hide";
+		PPTSld.shadeDobj.visibility = "hide";
+		PPTSld.panelobj.visibility = "hide";
+		PPTSld.Fobj.visibility = "hide";
+		PPTSld.Bobj.visibility = "hide";
+		PPTSld.Eobj.visibility = "hide";
+	}
+	return true;
+}
+
+function overMe() {
+	this.bgColor = "blue";
+}
+
+function outMe() {
+	this.bgColor = "#AAAAAA"; 
+}
+
+function makeElement( whichEl, whichContainer ) {
+	if ( arguments.length == 1 ) {
+		whichContainer = PPTSld;
+	}
+	tmp = new Layer(100,whichContainer);
+	eval( whichEl + " = tmp" );
+	return eval(whichEl);
+}
+
+function initMe( obj, clr, text ) {
+	obj.bgColor = clr;
+//	obj.document.write("<a href='javascript:return false'>" + text + "</a>");
+	obj.document.write( "<font size=2 face=Arial " );
+	if ( !M_HasPrevSld() && (obj == PPTSld.Bobj )  ) {
+		obj.document.write( " color='#808080' " );
+	}
+	else {
+		obj.onmouseover = overMe;
+		obj.onmouseout = outMe;
+	}	
+	obj.document.write( " > &nbsp " + text +"</font> <layer top=0 left=0 width=100 height=40 ></layer>");
+	obj.document.close();
+	obj.captureEvents(Event.CLICK);
+	obj.color = "black";		
+}
+
+function createCM() {
+  if ( base.IsFullScrMode() ) {
+  	var clr = "#AAAAAA";
+	PPTSld.shadeUobj = makeElement("SHADEU");
+	PPTSld.shadeDobj = makeElement("SHADED");
+	PPTSld.panelobj = makeElement("PANEL");
+	PPTSld.stripUobj = makeElement("STRIPU");
+	PPTSld.stripDobj = makeElement("STRIPD");
+	PPTSld.shadeUobj.bgColor = "#BBBBBB";
+	PPTSld.shadeDobj.bgColor = "#888888";
+	PPTSld.stripUobj.bgColor = "#777777";
+	PPTSld.stripDobj.bgColor = "#CCCCCC";
+	PPTSld.panelobj.bgColor = clr;
+	PPTSld.Fobj = makeElement("Next");
+	PPTSld.Bobj = makeElement("Previous");
+	PPTSld.Eobj = makeElement("EndShow");
+	initMe( PPTSld.Fobj, clr, "Next" );
+	PPTSld.Fobj.onclick = M_GoNextSld;
+
+	initMe( PPTSld.Bobj, clr, "Previous" );
+	PPTSld.Bobj.onclick = M_GoPrevSld;
+
+	initMe( PPTSld.Eobj, clr, "End Show");
+	PPTSld.Eobj.onclick = base.CloseFullScreen;
+  }
+}
+
+function IsContextMenu() {
+	return (g_ctxmenu == 1)
+}
+var g_notesTable = new Array()
+var g_hiddenSlide = new Array()
+makeSlide( 0,1,1);
+makeSlide( 1,1,1);
+makeSlide( 2,1,1);
+makeSlide( 3,1,1);
+makeSlide( 4,1,1);
+makeSlide( 5,1,1);
+makeSlide( 6,1,1);
+makeSlide( 7,1,1);
+makeSlide( 8,1,1);
+makeSlide( 9,1,1);
+makeSlide( 10,1,1);
+makeSlide( 11,0,1);
+makeSlide( 12,0,1);
+makeSlide( 13,1,1);
+
+var END_SHOW_HREF         = "endshow.htm",
+    OUTLINE_EXPAND_HREF   = "outline_expanded.htm",
+    OUTLINE_COLLAPSE_HREF = "outline_collapsed.htm",
+    OUTLINE_NAVBAR_HREF  = "outline_navigation_bar.htm",
+    NAVBAR_HREF           = "navigation_bar.htm",
+    BLANK_NOTES_HREF	  = "blank_notes.htm",
+    NUM_VISIBLE_SLIDES    = 14,
+    SIMPLE_FRAMESET       = 0,
+    SLIDE_FRAME	        = "PPTSld",
+    NOTES_FRAME           = "PPTNts",
+    OUTLINE_FRAME         = "PPTOtl",
+    OUTLINE_NAVBAR_FRAME  = "PPTOtlNav",
+    NAVBAR_FRAME          = "PPTNav",
+	MAIN_FRAME			  = "MainFrame",
+	FS_NAVBAR_HREF		  = "fs_navigation_bar.htm",
+	isIEFiles 			= 2,
+	isNAVFiles 			= 8,
+	isFLATFiles 			= 16,
+	includeNotes			= 1,
+	PPTPRESENTATION     = 1;
+var  INITSLIDENUM   = 1;
+
+var EndSlideShow = 0;
+var g_outline_href = OUTLINE_COLLAPSE_HREF;	
+var g_fullscrMode = 0;	
+var FSWin = null;
+var gtmpstr = document.location.href;
+var g_baseURL = gtmpstr.substr(0, gtmpstr.lastIndexOf("/") ) + "/" + "webqtl_demo2.ppt_files";
+var g_showoutline = 1;
+var g_shownotes = includeNotes;
+var g_currentSlide = INITSLIDENUM, g_prevSlide = INITSLIDENUM;
+var saveFSSlideNum = saveTPSlideNum = g_currentSlide;
+var saveFSprevSlide = saveTPprevSlide = g_prevSlide;
+var g_slideType="ie";
+var appVer = navigator.appVersion;
+var msie = appVer.indexOf( "MSIE " ) + appVer.indexOf( "Internet Explorer " );
+var isnav = ( navigator.appName.indexOf( "Netscape" ) >= 0 );
+var msieWin31 = (appVer.indexOf( "Windows 3.1" ) > 0);
+var ver = 0;
+var g_done = 0;
+var g_prevotlobjidx = 0;
+var g_ShowFSDefault = 0;
+var g_lastVisibleSld = 1;
+var g_allHidden = false;
+function IsIE() {
+	return (msie >= 0 );
+}
+
+function IsNav() {
+	return (isnav);
+}
+var msiePos = appVer.indexOf( "MSIE " );
+var inexPos = appVer.indexOf( "Internet Explorer " );
+if ( msiePos >= 0 )
+  ver = parseFloat( appVer.substring( msiePos+5, appVer.indexOf ( ";", msiePos ) ) );
+else if( inexPos >= 0 )
+  ver=parseFloat( appVer.substring( inexPos+18, appVer.indexOf(";",inexPos) ) )
+else
+  ver = parseInt( appVer );
+
+//var g_supportsPPTHTML = 0; //!msieWin31 && ( ( msie >= 0 && ver >= 3.02 ) || ( msie < 0 && ver >= 3 ) );
+
+function GetCurrentSlideNum()
+{   
+  obj = GetHrefObj( g_currentSlide );
+  if ( GetHrefObj( g_currentSlide ).m_origVisibility == 1 )
+    return obj.m_slideIdx;
+  else   
+    return g_currentSlide;
+}
+
+function GetNumSlides()
+{
+  if ( GetHrefObj( g_currentSlide ).m_origVisibility == 1 )
+    return NUM_VISIBLE_SLIDES;
+  else
+    return g_docTable.length;
+}
+
+function GetHrefObj( slideIdx )
+{ return g_docTable[slideIdx - 1];
+}
+
+function GetSlideNum( slideHref )
+{
+  for (ii=0; ii<g_docTable.length; ii++) {
+    if ( g_docTable[ii].m_slideHref == slideHref )
+      return ii+1;
+  }
+  return 1;
+}
+
+function GoToNextSld()
+{   
+  targetIdx = g_currentSlide + 1;
+  if ( GetHrefObj( targetIdx-1 ).m_origVisibility == 0 ) {
+    if ( targetIdx<=g_docTable.length ) {
+      obj = GetHrefObj( targetIdx );
+      obj.m_visibility = 1;
+      GoToSld( obj.m_slideHref );
+    }
+  }
+  else {
+    obj = GetHrefObj( targetIdx );
+    while ( obj && ( obj.m_origVisibility == 0 ) && ( targetIdx<=g_docTable.length ) )
+      obj = GetHrefObj( targetIdx++ );
+    if( obj && obj.m_origVisibility )
+      GoToSld( obj.m_slideHref );
+  }
+}
+
+function GoToPrevSld()
+{
+  targetIdx = g_currentSlide - 1;
+  if ( targetIdx > 0 ) {
+    obj = GetHrefObj( targetIdx );
+    while ( ( obj.m_visibility == 0 ) && ( targetIdx>0 ) )
+      obj = GetHrefObj( targetIdx-- );
+    GoToSld( obj.m_slideHref );
+  }
+}
+
+function GoToLast()
+{
+  targetIdx = g_docTable.length;
+  if ( targetIdx != g_currentSlide )
+    GoToSld( GetHrefObj( targetIdx ).m_slideHref );
+}
+
+function GoToFirst()
+{ GoToSld( GetHrefObj(1).m_slideHref );
+}
+
+function highlite() {
+	if ( IsFullScrMode() )
+		return;
+	index = GetCurrentSlideNum();
+	if ( !frames[MAIN_FRAME].frames[OUTLINE_FRAME] )
+		return;
+	if ( msie < 0 ) {
+		if ( g_prevotlobjidx != 0 ) {
+			eval( "otlobj = frames[MAIN_FRAME].frames[OUTLINE_FRAME].document.LAYERID" + g_prevotlobjidx );
+			otlobj.hidden = true;
+		}
+		else
+			index = GetCurrentSlideNum();
+		eval( "otlobj = frames[MAIN_FRAME].frames[OUTLINE_FRAME].document.LAYERID" + index );
+		otlobj.hidden = false;
+	
+		g_prevotlobjidx = index;
+		
+		return;
+	}
+	if ( !g_showoutline )
+		return;
+		
+		backclr = frames[MAIN_FRAME].frames[OUTLINE_FRAME].document.body.bgColor;
+		textclr = frames[MAIN_FRAME].frames[OUTLINE_FRAME].document.body.text;
+	if ( g_prevotlobjidx != 0 ) {
+		eval( "otlobj = frames[MAIN_FRAME].frames[OUTLINE_FRAME].document.all.p" + g_prevotlobjidx );
+		otlobj.style.backgroundColor = backclr;
+		otlobj.style.color = textclr;
+		otlobj.all.AREF.style.color = textclr;
+	}
+	else
+		index = GetCurrentSlideNum();
+	eval( "otlobj = frames[MAIN_FRAME].frames[OUTLINE_FRAME].document.all.p" + index );
+	otlobj.style.backgroundColor = textclr;
+	otlobj.style.color = backclr;
+	otlobj.all.AREF.style.color = backclr;
+	g_prevotlobjidx = index;
+}
+
+function ChangeFrame( frame, href )
+{
+if ( IsFramesMode() ) {
+  if ( NAVBAR_FRAME == frame || OUTLINE_NAVBAR_FRAME ==  frame ) {
+	    frames[frame].location.replace(href);
+  }
+  else if( ! ( ( OUTLINE_FRAME == frame && !g_showoutline)  || (NOTES_FRAME == frame && !g_shownotes ) ) ){
+	    frames[MAIN_FRAME].frames[frame].location.href = href;
+  }
+ }
+ else {
+ 	if ( frame == NAVBAR_FRAME || frame == SLIDE_FRAME ) {
+ 	  if( frame == NAVBAR_FRAME ) {
+ 	  	 href = FS_NAVBAR_HREF;
+ 	  	
+ 	  }	    
+ 	  if( frame == NAVBAR_FRAME ) 
+	      window.frames[frame].location.replace(href);
+	 else
+	      window.frames[frame].location.href = href;
+ 	}
+ }
+  
+}
+
+function shutEventPropagation() {
+	if ( IsNav() )
+		return;
+		
+	var slideFrame;
+	if ( IsFramesMode() )
+		slideFrame = frames[MAIN_FRAME].frames[SLIDE_FRAME];
+	else
+		slideFrame = window.frames[SLIDE_FRAME];
+	if ( slideFrame.event ) 
+		slideFrame.event.cancelBubble=true;
+}
+				
+function GoToSld( slideHref )
+{
+  shutEventPropagation();
+  if ( slideHref != GetHrefObj( g_currentSlide ).m_slideHref || g_slideType != GetHrefObj( g_currentSlide ).type) {
+    g_prevSlide = g_currentSlide;
+    g_currentSlide = GetSlideNum( slideHref );
+	g_slideType = GetHrefObj( g_currentSlide ).type;
+    obj = GetHrefObj( g_currentSlide );
+    obj.m_visibility = 1;
+    ChangeFrame( SLIDE_FRAME, slideHref );
+    if( !SIMPLE_FRAMESET )
+      ChangeFrame( NOTES_FRAME, obj.m_notesHref );
+    ChangeFrame( NAVBAR_FRAME, NAVBAR_HREF );
+	    
+  }
+}
+
+function PrevSldViewed()
+{ GoToSld( GetHrefObj( g_prevSlide ).m_slideHref );
+}
+
+function NoHref() {}
+
+function ExpandOutline( )
+{ 
+ g_outline_href = OUTLINE_EXPAND_HREF;
+ ChangeFrame( OUTLINE_FRAME, OUTLINE_EXPAND_HREF );
+ frames[OUTLINE_NAVBAR_FRAME].location.replace( OUTLINE_NAVBAR_HREF);
+}
+
+function CollapseOutline()
+{ 
+ g_outline_href = OUTLINE_COLLAPSE_HREF;
+ ChangeFrame( OUTLINE_FRAME, OUTLINE_COLLAPSE_HREF );
+ frames[OUTLINE_NAVBAR_FRAME].location.replace( OUTLINE_NAVBAR_HREF);
+ }
+
+function SlideUpdated( id )
+{
+  if ( id != GetHrefObj( g_currentSlide ).m_slideHref )  {
+    g_prevSlide = g_currentSlide;
+    g_currentSlide = GetSlideNum( id );
+    obj = GetHrefObj( g_currentSlide );
+    if( !SIMPLE_FRAMESET )
+      ChangeFrame( NOTES_FRAME, obj.m_notesHref );
+    ChangeFrame( NAVBAR_FRAME, NAVBAR_HREF );
+  }
+}
+
+function hrefList( slideHref, notesHref, visible, slideIdx, type )
+{
+  this.m_slideHref  = slideHref;
+  this.m_notesHref  = notesHref;
+  this.m_navbarHref = NAVBAR_HREF;
+  this.m_origVisibility = visible;
+  this.m_visibility = visible;
+  this.m_slideIdx = slideIdx;
+  this.type = type;
+}
+
+function IsFullScrMode() {
+	return g_fullscrMode;
+}
+
+
+function IsFramesMode() {
+	return (1 - g_fullscrMode);
+}
+
+function SldUpdated( id )
+{
+  if ( ( id != GetHrefObj( g_currentSlide ).m_slideHref )  || ( g_currentSlide == g_lastVisibleSld ) ){
+    g_prevSlide = g_currentSlide;
+    g_currentSlide = GetSlideNum( id );
+    obj = GetHrefObj( g_currentSlide );
+    if( !SIMPLE_FRAMESET )
+      ChangeFrame( NOTES_FRAME, obj.m_notesHref );
+    ChangeFrame( NAVBAR_FRAME, NAVBAR_HREF );
+  }
+}
+
+function ToggleOutline() {
+	g_showoutline = 1 - g_showoutline;
+	writeMyFrame();
+}
+
+function ShowHideNotes() {
+	g_shownotes = 1 - g_shownotes;
+	writeMyFrame();
+}
+
+function writeMyFrame() {
+		SetFSMode(0);
+		obj = frames[MAIN_FRAME];
+		
+		var curslide = g_baseURL + "/" +  GetHrefObj( g_currentSlide ).m_slideHref;
+		var curnotes = g_baseURL + "/" +  GetHrefObj( g_currentSlide ).m_notesHref;
+		var otlhref = g_baseURL + "/" +  g_outline_href;
+		if ( msie < 0 ) {			
+		if ( ! g_showoutline && g_shownotes ) {
+			obj.document.write( '<HTML><HEAD><SCRIPT language=JavaScript src=' + g_baseURL + '/script.js></SCRIPT><SCRIPT> base = parent; <\/SCRIPT><\/HEAD> \
+				<frameset rows=\"*,20%\" id=\"frameset2\" > \
+				<frame src=\"' + curslide + '\" name=PPTSld marginheight=0 marginwidth=0> \
+				<frame src=\"' + curnotes + '\" name=PPTNts marginheight=0 marginwidth=0> \
+				</frameset> </html>' );
+		}
+		else if( g_showoutline && g_shownotes  ){
+			obj.document.write( '<HTML><HEAD><SCRIPT language=JavaScript src=' + g_baseURL + '/script.js></SCRIPT><SCRIPT> base = parent; <\/SCRIPT><\/HEAD> \
+				<frameset cols=\"20%,*\" id=\"frameset1\"> \
+				<frame src=\"' + otlhref + '\" name=PPTOtl> \
+				<frameset rows=\"*,20%\" id=\"frameset2\" > \
+				<frame src=\"' + curslide + '\" name=PPTSld marginheight=0 marginwidth=0> \
+				<frame src=\"' + curnotes + '\" name=PPTNts marginheight=0 marginwidth=0> \
+				</frameset> </frameset></html>' );
+		}		
+		else if ( !g_shownotes && !g_showoutline ) {
+			obj.document.write( '<HTML><HEAD><SCRIPT language=JavaScript src=' + g_baseURL + '/script.js></SCRIPT><SCRIPT> base = parent; <\/SCRIPT><\/HEAD> \
+				<frameset rows="*,0" frameborder=0 > \
+				<frame src=\"' + curslide + '\" name=PPTSld marginheight=0 marginwidth=0> \
+				</frameset> </html>' );
+		}
+		else if( !g_shownotes  && g_showoutline ) {
+			obj.document.write( '<HTML><HEAD><SCRIPT language=JavaScript src=' + g_baseURL + '/script.js></SCRIPT><SCRIPT> base = parent; <\/SCRIPT><\/HEAD> \
+				<frameset cols=\"20%,*\" id=\"frameset1\"> \
+				<frame src=\"' + otlhref + '\" name=PPTOtl> \
+				<frame src=\"' + curslide + '\" name=PPTSld marginheight=0 marginwidth=0> \
+				</frameset></html>' );
+		}
+		obj.document.close();
+		}
+		else {
+			if ( g_showoutline ) {
+				obj.PPTHorizAdjust.cols = "20%,*";
+				obj.PPTOtl.location.reload();
+			}
+			else {
+				obj.PPTHorizAdjust.cols = "0,*";
+			}
+			if ( g_shownotes ) {
+				obj.PPTVertAdjust.rows = "*,20%";
+				obj.PPTNts.location.href = curnotes;
+			}
+			else {
+				obj.PPTVertAdjust.rows = "*,0";
+			}
+		}
+		ChangeFrame( OUTLINE_NAVBAR_FRAME, OUTLINE_NAVBAR_HREF );
+}
+
+function FullScreen() {
+	g_done = 0;
+
+	
+	SetFSMode(1);
+	if ( msie >= 0 )
+		FSWin = window.open( g_baseURL + "/" + "fullscreen.htm", null, "fullscreen=yes");
+	else {
+		var height = screen.availHeight;
+		if ( window.navigator.platform.indexOf( "Mac" ) >= 0 ) {
+			height -= 30;
+		}
+		FSWin = window.open( g_baseURL + "/" + "fullscreen.htm", "null", "height="+ height + ",width=" + screen.availWidth + ",screenX=0,screenY=0");
+	}
+}
+
+function SetFSMode( i ) {
+
+}
+
+function Slide( i ) {
+	SetFSMode(0);
+	GoToSld(GetHrefObj(i).m_slideHref);
+}
+
+function TP_GoToNextSld() {
+	SetFSMode(0);
+	GoToNextSld();
+}
+
+function TP_GoToPrevSld() {
+	SetFSMode(0);
+	GoToPrevSld();
+}
+
+function CloseFullScreen() {
+	g_done = 0;	
+	
+	if ( IsNav() ){
+		if ( self.opener )
+			opener.FSWin = null;
+	}
+	window.close();
+}
+
+function slidenum(i) {
+	var slidename = "slide";
+	if ( i < 10 )
+		return ( slidename + "000" + i);
+	else if ( i < 100 )
+		return ( slidename + "00" + i );
+	else if ( i < 1000 ) 
+		return (slidename + "0" + i );
+	else
+		return (slidename + i );
+}
+function UpdateLastVisibleSlide( index ) {
+	if ( g_lastVisibleSld < index ) 
+		g_lastVisibleSld = index;
+}
+
+function jpegArray( numSlides ) {
+count_hidden = 0;
+	g_docTable = new Array();
+  for( i=0; i<numSlides; i++ ) {
+    j = 2 * numSlides + i + 1;
+    var str = slidenum( j ) +".htm";
+	if( g_notesTable[i] == 1 )
+		g_docTable[i] = new hrefList( str, slidenum(i+1 ) + "_notes_pane.htm", g_hiddenSlide[i], i+1-count_hidden, "jpeg" );
+	else
+		g_docTable[i] = new hrefList( str, BLANK_NOTES_HREF, g_hiddenSlide[i], i+1-count_hidden, "jpeg" );
+    if ( !g_hiddenSlide[i] ) count_hidden++;
+    else UpdateLastVisibleSlide( i+1 );
+  }
+}
+
+function ieArray( numSlides ) {
+count_hidden = 0;
+	g_docTable = new Array();
+  for( i=0; i<numSlides; i++ ) {
+    var str = slidenum(i+1) +".htm";
+	if( g_notesTable[i] == 1 )
+		g_docTable[i] = new hrefList( str, slidenum( i+1 ) + "_notes_pane.htm", g_hiddenSlide[i], i+1-count_hidden, "ie" );
+	else
+		g_docTable[i] = new hrefList( str, BLANK_NOTES_HREF, g_hiddenSlide[i], i+1-count_hidden, "ie" );
+    if ( !g_hiddenSlide[i] ) count_hidden++;
+    else UpdateLastVisibleSlide( i+1 );
+  }
+}
+
+function navArray( numSlides ) {
+count_hidden = 0;
+	g_docTable = new Array();
+  for( i=0; i<numSlides; i++ ) {
+    j = numSlides + i + 1;
+    var str = slidenum( j ) +".htm";
+	if( g_notesTable[i] == 1 )
+		g_docTable[i] = new hrefList( str, slidenum(i+1 ) + "_notes_pane.htm", g_hiddenSlide[i], i+1-count_hidden, "nav" );
+	else
+		g_docTable[i] = new hrefList( str, BLANK_NOTES_HREF, g_hiddenSlide[i], i+1-count_hidden, "nav" );
+    if ( !g_hiddenSlide[i] ) count_hidden++;
+    else UpdateLastVisibleSlide( i+1 );
+  }
+}
+
+function LoadHTMLVersion() {
+  var os = window.navigator.platform.indexOf("Mac");
+  if ( (msie || isnav ) && ( (os < 0 && ver >= 4 ) || ( os >= 0 && ver >= 5 ) || (os >=0 && msie < 0 && ver >= 4 ) )  ){
+	if ( msie >= 0 )  {
+		if ( isIEFiles > 0 )
+			ieArray( 14 );
+		else if ( isFLATFiles > 0 ){
+			/*if ( IsFramesMode() )
+				StatusPlay("This presentation is optimized for use with older versions of your browser. Since you are using a more recent version of Microsoft Internet Explorer or Netscape Navigator, consider optimizing this presentation to take advantage of your current version's advanced capabilities."); */
+			jpegArray( 14 );
+		}
+		else
+			window.location.replace(  "webqtl_demo2.ppt_files/error.htm" );
+	}
+	else {
+		if ( isNAVFiles > 0 && ver < 5) 
+			navArray( 14 );
+		else if ( isFLATFiles > 0 ) {
+			/* if ( IsFramesMode() )
+				StatusPlay("This presentation is optimized for use with older versions of your browser. Since you are using a more recent version of Microsoft Internet Explorer or Netscape Navigator, consider optimizing this presentation to take advantage of your current version's advanced capabilities."); */
+			jpegArray( 14 );
+		}
+		else
+			window.location.replace(  "webqtl_demo2.ppt_files/error.htm" );
+	}
+}
+else {
+	/*
+	if ( IsFramesMode() && !isWebTV() )
+		StatusPlay("This presentation contains content that your browser may not be able to show properly. This presentation was optimized for more recent versions of Microsoft Internet Explorer or Netscape Navigator.");
+	*/
+	if ( isFLATFiles <= 0 ) {
+	/*	if ( IsFramesMode() )
+			window.alert("This presentation contains content that your browser may not be able to display properly. This presentation is optimized for more recent versions of Microsoft Internet Explorer or Netscape Navigator." );
+	*/
+		window.location.replace(  "webqtl_demo2.ppt_files/error.htm" );
+	}		
+	/*
+	else if ( IsFramesMode()  && !isWebTV() )
+		StatusPlay( "This presentation contains content that your browser may not be able to show properly. This presentation was optimized for more recent versions of Microsoft Internet Explorer or Netscape Navigator." ); 
+	*/	
+	jpegArray ( 14 );
+  }
+  
+}
+
+function isWebTV() {
+	if ( window.navigator.appName.indexOf( 'WebTV' ) >= 0 )
+		return true;
+	return false;
+}
+		
+var count;
+var statusText;
+var statusfirst = 0;
+ function display50( text ) 
+{
+	len = text.length;
+	if ( len < 50 && count < 2) {
+		window.status = text;
+		window.setTimeout( "repeat()", 300 );
+	}	
+	else {
+		var period = 200;
+		window.status = text;
+		newtext = text.substring( 1, len );
+		if ( statusfirst ) {
+			statusfirst = 0;
+			period = 2000;
+		}	
+		window.setTimeout( "display50( newtext )", period );
+	}
+}
+function repeat(  ) {
+	count++;		
+	statusfirst = 1;
+	display50( statusText );
+}
+
+function StatusPlay( text ) {
+	count = 0;
+	statusText = text;
+	repeat( );		
+ }
+function makeSlide( i, notes, visible ) {
+	g_notesTable[i] = notes;
+	g_hiddenSlide[i] = visible;
+}	
+
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0001.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0001.htm
new file mode 100755
index 00000000..11938baa
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0001.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Aug-15-05: The GeneNetwork and WebQTL : PART 2    link to www.genenetwork.org">
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
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+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0001.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
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+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.png" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:3.53%;left:2.11%;width:96.15%;height:18.19%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='mso-line-spacing:"-277 0 -1";mso-margin-left-alt:232;
+mso-text-indent-alt:0;position:absolute;top:11.65%;left:.96%;width:98.2%;
+height:73.78%'><span style='position:absolute;top:0%;left:0%;width:100.0%'><span
+style='font-size:73%'>The GeneNetwork and WebQTL : PART 2<span
+style="mso-spacerun: yes">&nbsp;&nbsp; </span><br>
+</span></span><span
+style='position:absolute;top:48.68%;left:4.34%;width:95.23%'><span
+style='font-size:73%'>link to www.genenetwork.org</span><span style='font-size:
+73%;mso-special-format:lastCR;display:none'><i><br>
+</i></span></span></div>
+</div>
+<div style='position:absolute;top:24.02%;left:5.82%;width:54.03%;height:68.55%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=B style='position:absolute;top:0%;left:3.67%;width:96.32%;
+height:61.34%'>
+<div style='mso-line-spacing:"-220 0 -216";mso-margin-left-alt:348;mso-text-indent-alt:
+56;position:absolute;top:0%;left:0%;width:100.0%;height:51.68%'><span
+style='position:absolute;top:0%;left:0%;width:89.05%'><span style='mso-special-format:
+nobullet;display:none;color:#FBFDB8;font-family:"Monotype Sorts";font-size:
+99%'>l</span><span style='font-size:94%;color:#E9EB5D;mso-color-index:3'>Part
+1. How to study </span></span><span style='position:absolute;top:23.57%;
+left:9.66%;width:79.13%'><span style='font-size:94%;color:#E9EB5D;mso-color-index:
+3'>expression variation </span></span><span style='position:absolute;
+top:47.15%;left:9.66%;width:90.33%'><span style='font-size:94%;color:#E9EB5D;
+mso-color-index:3'>and genetic correlation </span></span><span
+style='position:absolute;top:70.73%;left:9.66%;width:79.13%'><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3'>(slides 2&#8211;17)<br>
+</span></span></div>
+<div style='mso-line-spacing:"-220 0 -216";mso-margin-left-alt:348;mso-text-indent-alt:
+56;position:absolute;top:60.5%;left:0%;width:93.63%;height:39.91%'><span
+style='position:absolute;top:0%;left:0%;width:95.1%'><span style='mso-special-format:
+nobullet;display:none;color:#FBFDB8;font-family:"Monotype Sorts";font-size:
+99%'>l</span><span style='font-size:94%;color:#E9EB5D;mso-color-index:3'>Part
+2. Discovering </span></span><span style='position:absolute;top:30.52%;
+left:10.32%;width:89.67%'><span style='font-size:94%;color:#E9EB5D;mso-color-index:
+3'>upstream modulators </span></span><span style='position:absolute;top:61.05%;
+left:10.32%;width:84.51%'><span style='font-size:94%;color:#E9EB5D;mso-color-index:
+3'>(slides 18&#8211;29)</span></span></div>
+</div>
+</div>
+<img border=0 src="slide0001_image001.png" style='position:absolute;top:17.84%;
+left:74.17%;width:23.57%;height:64.31%'>
+<div class=O style='position:absolute;top:75.44%;left:74.56%;width:10.46%;
+height:14.48%'>
+<div style='mso-line-spacing:"-346 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:42.68%'><span
+style='font-family:"Arial Rounded MT Bold";font-size:233%;color:#6E6E6E'>RNA</span><span
+style='font-family:"Arial Rounded MT Bold";font-size:300%;color:#6E6E6E;
+display:none'><br>
+</span></div>
+<div style='mso-line-spacing:"-346 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:45.12%;left:0%;width:82.27%;height:54.87%'><span
+style='font-family:"Arial Rounded MT Bold";font-size:300%;color:#6E6E6E;
+mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+<div style='position:absolute;top:82.15%;left:4.1%;width:96.15%;height:18.19%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'></div>
+<img border=0 src="slide0001_image002.png" style='position:absolute;top:50.53%;
+left:48.74%;width:25.56%;height:13.07%'></div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Part 2: Discovering
+  upstream modulators and quantitative trait loci (QTLs). A quantitative trait
+  locus is a chromosomal region that harbors one or a few polymorphic gene loci
+  that influence a trait. We are going to be looking for QTLs that modulate the
+  steady state expression level of App in the adult mouse forebrain.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0001_image001.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0001_image001.png
new file mode 100755
index 00000000..a1cb20e4
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diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0001_image002.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0001_image002.png
new file mode 100755
index 00000000..e06bd0db
--- /dev/null
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diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0001_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0001_notes_pane.htm
new file mode 100755
index 00000000..9e0445f3
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0001_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Part 2: Discovering
+  upstream modulators and quantitative trait loci (QTLs). A quantitative trait
+  locus is a chromosomal region that harbors one or a few polymorphic gene loci
+  that influence a trait. We are going to be looking for QTLs that modulate the
+  steady state expression level of App in the adult mouse forebrain.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0002.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0002.htm
new file mode 100755
index 00000000..b40dd6e1
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0002.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<link rel=Stylesheet href="master05_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0002.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master05_background.png" v:shapes="_x0000_s3075"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div class=O style='position:absolute;top:92.93%;left:8.74%;width:18.67%;
+height:5.83%'>
+<div style='mso-line-spacing:"-134 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:48.48%'><span
+style='font-family:Times;font-size:117%;color:white;display:none'><br>
+</span></div>
+<div style='mso-line-spacing:"-134 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:51.51%;left:0%;width:100.0%;height:48.48%'><span
+style='font-family:Times;font-size:117%;color:white;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</div>
+<div class=O style='position:absolute;top:92.93%;left:35.49%;width:29.4%;
+height:5.83%'>
+<div style='text-align:center;mso-line-spacing:"-134 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:0%;left:0%;width:100.0%;
+height:48.48%'><span style='font-family:Times;font-size:117%;color:white;
+display:none'><br>
+</span></div>
+<div style='text-align:center;mso-line-spacing:"-134 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:51.51%;left:0%;width:100.0%;
+height:48.48%'><span style='font-family:Times;font-size:117%;color:white;
+mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+<div style='position:absolute;top:2.12%;left:-5.43%;width:105.96%;height:11.13%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:0%;left:0%;width:100.0%;height:92.06%'>
+<div style='text-align:center;mso-line-spacing:"-240 0 0";mso-margin-left-alt:
+16;mso-text-indent-alt:16;position:absolute;top:0%;left:0%;width:100.0%;
+height:65.51%'><span style='font-family:Arial;font-size:267%;color:#E9EB5D'>How
+to make recombinant inbred strains (RI)</span><span style='font-family:Arial;
+font-size:150%;color:aqua;display:none'><br>
+</span></div>
+<div style='text-align:center;mso-line-spacing:"-160 0 0";mso-margin-left-alt:
+16;mso-text-indent-alt:16;position:absolute;top:62.06%;left:6.37%;width:87.37%;
+height:37.93%'><span style='font-family:Arial;font-size:150%;color:aqua;
+mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<img border=0 src="slide0002_image003.png" style='position:absolute;top:28.79%;
+left:45.43%;width:18.14%;height:1.06%'><img border=0
+src="slide0002_image004.png" style='position:absolute;top:20.31%;left:28.21%;
+width:1.98%;height:11.83%'>
+<div style='position:absolute;top:15.01%;left:25.03%;width:19.47%;height:9.71%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:9.09%;left:6.8%;width:93.19%;
+height:81.81%'>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:48.88%'><span
+style='font-family:Arial;font-size:150%;color:#FFFF99'>C57BL/6J (B)<br>
+</span></div>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:51.11%;left:0%;width:83.21%;height:48.88%'><span
+style='font-family:Arial;font-size:150%;color:#FFFF99;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</div>
+</div>
+<img border=0 src="slide0002_image005.png" style='position:absolute;top:20.31%;
+left:30.46%;width:1.98%;height:11.83%'>
+<div style='position:absolute;top:15.01%;left:62.25%;width:16.55%;height:9.71%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:9.09%;left:8.0%;width:92.8%;
+height:81.81%'>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:48.88%'><span
+style='font-family:Arial;font-size:150%;color:#FFFF99'>DBA/2J (D)<br>
+</span></div>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:51.11%;left:0%;width:82.75%;height:48.88%'><span
+style='font-family:Arial;font-size:150%;color:#FFFF99;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</div>
+</div>
+<img border=0 src="slide0002_image006.png" style='position:absolute;top:20.31%;
+left:66.62%;width:4.23%;height:11.83%'><img border=0
+src="slide0002_image007.png" style='position:absolute;top:35.51%;left:23.97%;
+width:50.86%;height:1.23%'><img border=0 src="slide0002_image008.png"
+style='position:absolute;top:35.68%;left:24.1%;width:.66%;height:4.06%'><img
+border=0 src="slide0002_image009.png" style='position:absolute;top:35.68%;
+left:40.92%;width:.52%;height:4.06%'><img border=0 src="slide0002_image010.png"
+style='position:absolute;top:35.68%;left:57.61%;width:.52%;height:4.06%'><img
+border=0 src="slide0002_image011.png" style='position:absolute;top:35.68%;
+left:74.3%;width:.52%;height:3.88%'>
+<div style='position:absolute;top:42.75%;left:5.69%;width:6.49%;height:12.36%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:8.57%;left:20.4%;width:73.46%;
+height:84.28%'>
+<div style='mso-line-spacing:"-230 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:49.15%'><span
+style='font-family:Arial;font-size:200%;color:#FFFF99'><b>F1<br>
+</b></span></div>
+<div style='mso-line-spacing:"-230 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:50.84%;left:0%;width:83.33%;height:49.15%'><span
+style='font-family:Arial;font-size:200%;color:#FFFF99;mso-special-format:lastCR;
+display:none'><b><br>
+</b></span></div>
+</div>
+</div>
+<img border=0 src="slide0002_image012.png" style='position:absolute;top:39.92%;
+left:22.25%;width:4.23%;height:11.83%'><img border=0
+src="slide0002_image013.png" style='position:absolute;top:39.92%;left:38.94%;
+width:4.23%;height:11.83%'><img border=0 src="slide0002_image014.png"
+style='position:absolute;top:39.92%;left:55.62%;width:4.23%;height:11.83%'><img
+border=0 src="slide0002_image015.png" style='position:absolute;top:39.39%;
+left:72.84%;width:4.23%;height:11.83%'><img border=0
+src="slide0002_image016.png" style='position:absolute;top:43.46%;left:43.97%;
+width:11.12%;height:3.53%'><img border=0 src="slide0002_image017.png"
+style='position:absolute;top:60.95%;left:20.66%;width:9.8%;height:3.53%'>
+<div style='position:absolute;top:71.73%;left:58.41%;width:20.26%;height:26.67%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:12.58%;left:6.53%;width:88.23%;
+height:83.44%'>
+<div style='text-align:center;mso-line-spacing:"-269 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:0%;left:0%;width:100.0%;
+height:69.84%'><span style='position:absolute;top:0%;left:0%;width:99.25%'><span
+style='font-family:Arial;font-size:117%;color:#FFFF99'><b>20 generations </b></span></span><span
+style='position:absolute;top:39.77%;left:0%;width:100.0%'><span
+style='font-family:Arial;font-size:117%;color:#FFFF99'><b>brother-sister </b></span></span><span
+style='position:absolute;top:80.68%;left:0%;width:99.25%'><span
+style='font-family:Arial;font-size:117%;color:#FFFF99'><b>matings</b></span><span
+style='font-family:Arial;font-size:233%;color:#FFFF99;display:none'><b><br>
+</b></span></span></div>
+<div style='text-align:center;mso-line-spacing:"-269 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:73.8%;left:0%;width:99.25%;
+height:26.98%'><span style='font-family:Arial;font-size:233%;color:#FFFF99;
+mso-special-format:lastCR;display:none'><b><br>
+</b></span></div>
+</div>
+</div>
+<img border=0 src="slide0002_image018.png" style='position:absolute;top:60.95%;
+left:50.72%;width:9.93%;height:3.53%'><img border=0 src="slide0002_image019.png"
+style='position:absolute;top:62.72%;left:54.03%;width:4.37%;height:28.97%'><img
+border=0 src="slide0002_image020.png" style='position:absolute;top:61.13%;
+left:79.86%;width:10.86%;height:3.53%'><img border=0
+src="slide0002_image021.png" style='position:absolute;top:62.36%;left:83.97%;
+width:4.1%;height:28.79%'>
+<div style='position:absolute;top:92.93%;left:21.72%;width:9.27%;height:9.71%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:9.09%;left:12.85%;width:85.71%;
+height:81.81%'>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:48.88%'><span
+style='font-family:Arial;font-size:150%;color:#FFFF99'>BXD1</span><span
+style='font-family:Arial;font-size:150%;color:#484848;display:none'><br>
+</span></div>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:51.11%;left:0%;width:83.33%;height:48.88%'><span
+style='font-family:Arial;font-size:150%;color:#484848;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</div>
+</div>
+<div style='position:absolute;top:92.75%;left:51.78%;width:9.27%;height:9.71%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:9.09%;left:12.85%;width:85.71%;
+height:81.81%'>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:48.88%'><span
+style='font-family:Arial;font-size:150%;color:#FFFF99'>BXD2<br>
+</span></div>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:51.11%;left:0%;width:83.33%;height:48.88%'><span
+style='font-family:Arial;font-size:150%;color:#FFFF99;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</div>
+</div>
+<div style='position:absolute;top:92.93%;left:80.79%;width:10.99%;height:5.65%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17;position:absolute;top:15.62%;left:12.04%;width:87.95%;
+height:68.75%'><span style='font-family:Arial;font-size:150%;color:#FFFF99'>BXD80</span></div>
+</div>
+<div style='position:absolute;top:90.45%;left:64.1%;width:17.74%;height:17.49%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:6.06%;left:7.46%;width:92.53%;
+height:88.88%'>
+<div style='mso-line-spacing:"-341 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:48.86%'><span
+style='font-family:Arial;font-size:300%;color:#FFFF99'>+ � +<br>
+</span></div>
+<div style='mso-line-spacing:"-341 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:50.0%;left:0%;width:83.87%;height:48.86%'><span
+style='font-family:Arial;font-size:300%;color:#FFFF99;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</div>
+</div>
+<div style='position:absolute;top:62.89%;left:4.9%;width:6.49%;height:12.36%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:7.14%;left:20.4%;width:73.46%;
+height:84.28%'>
+<div style='mso-line-spacing:"-230 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:49.15%'><span
+style='font-family:Arial;font-size:200%;color:#FFFF99'><b>F2<br>
+</b></span></div>
+<div style='mso-line-spacing:"-230 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:50.84%;left:0%;width:83.33%;height:49.15%'><span
+style='font-family:Arial;font-size:200%;color:#FFFF99;mso-special-format:lastCR;
+display:none'><b><br>
+</b></span></div>
+</div>
+</div>
+<img border=0 src="slide0002_image022.png" style='position:absolute;top:54.24%;
+left:18.01%;width:75.62%;height:1.06%'><img border=0
+src="slide0002_image023.png" style='position:absolute;top:54.06%;left:17.88%;
+width:.66%;height:3.88%'><img border=0 src="slide0002_image024.png"
+style='position:absolute;top:54.24%;left:32.45%;width:.52%;height:3.88%'><img
+border=0 src="slide0002_image025.png" style='position:absolute;top:54.24%;
+left:48.07%;width:.52%;height:4.06%'><img border=0 src="slide0002_image026.png"
+style='position:absolute;top:54.24%;left:62.78%;width:.52%;height:4.06%'><img
+border=0 src="slide0002_image027.png" style='position:absolute;top:54.24%;
+left:77.74%;width:.52%;height:4.06%'><img border=0 src="slide0002_image028.png"
+style='position:absolute;top:54.59%;left:92.71%;width:.52%;height:3.71%'><img
+border=0 src="slide0002_image029.png" style='position:absolute;top:44.87%;
+left:49.13%;width:.79%;height:10.07%'><img border=0 src="slide0002_image030.png"
+style='position:absolute;top:57.59%;left:15.89%;width:4.23%;height:11.83%'><img
+border=0 src="slide0002_image031.png" style='position:absolute;top:57.59%;
+left:30.86%;width:4.37%;height:11.83%'><img border=0
+src="slide0002_image032.png" style='position:absolute;top:57.59%;left:46.35%;
+width:4.23%;height:11.83%'><img border=0 src="slide0002_image033.png"
+style='position:absolute;top:57.59%;left:60.92%;width:4.23%;height:11.83%'><img
+border=0 src="slide0002_image034.png" style='position:absolute;top:57.59%;
+left:75.62%;width:4.23%;height:11.83%'><img border=0
+src="slide0002_image035.png" style='position:absolute;top:57.59%;left:90.86%;
+width:4.23%;height:11.83%'><img border=0 src="slide0002_image036.png"
+style='position:absolute;top:84.09%;left:56.42%;width:1.98%;height:1.41%'><img
+border=0 src="slide0002_image037.png" style='position:absolute;top:80.21%;
+left:25.96%;width:1.98%;height:11.83%'><img border=0
+src="slide0002_image038.png" style='position:absolute;top:84.98%;left:86.09%;
+width:1.85%;height:2.12%'>
+<div style='position:absolute;top:75.61%;left:1.58%;width:13.9%;height:13.78%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:7.69%;left:.95%;width:99.04%;
+height:85.89%'>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:0%;left:7.69%;width:83.65%;
+height:32.83%'><span style='font-family:Arial;font-size:150%;color:#FFFF99'><b>BXD
+RI<br>
+</b></span></div>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:32.83%;left:0%;width:100.0%;
+height:32.83%'><span style='font-family:Arial;font-size:150%;color:#FFFF99'><b>Strain
+set<br>
+</b></span></div>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:67.16%;left:7.69%;width:83.65%;
+height:32.83%'><span style='font-family:Arial;font-size:150%;color:#FFFF99;
+mso-special-format:lastCR;display:none'><b><br>
+</b></span></div>
+</div>
+</div>
+<img border=0 src="slide0002_image039.png" style='position:absolute;top:12.36%;
+left:14.17%;width:10.59%;height:6.36%'><img border=0
+src="slide0002_image040.png" style='position:absolute;top:10.6%;left:76.42%;
+width:14.3%;height:8.3%'>
+<div style='position:absolute;top:20.84%;left:17.48%;width:9.53%;height:13.78%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:7.69%;left:6.94%;width:88.88%;
+height:85.89%'>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:0%;left:7.81%;width:82.81%;
+height:32.83%'><span style='font-family:Arial;font-size:150%;color:#FFFF99'>fully<br>
+</span></div>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:32.83%;left:0%;width:100.0%;
+height:32.83%'><span style='font-family:Arial;font-size:150%;color:#FFFF99'>inbred<br>
+</span></div>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:67.16%;left:7.81%;width:82.81%;
+height:32.83%'><span style='font-family:Arial;font-size:150%;color:#FFFF99;
+mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<div style='position:absolute;top:38.16%;left:2.91%;width:11.78%;height:9.71%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:9.09%;left:3.37%;width:94.38%;
+height:81.81%'>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:0%;left:0%;width:100.0%;
+height:48.88%'><span style='font-family:Arial;font-size:150%;color:#FFFF99'>isogenic<br>
+</span></div>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:51.11%;left:8.33%;width:83.33%;
+height:48.88%'><span style='font-family:Arial;font-size:150%;color:#FFFF99;
+mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<div style='position:absolute;top:54.41%;left:1.85%;width:12.18%;height:13.78%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:7.69%;left:2.17%;width:95.65%;
+height:85.89%'>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:0%;left:7.95%;width:84.09%;
+height:32.83%'><span style='font-family:Arial;font-size:150%;color:#FFFF99'>hetero-<br>
+</span></div>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:32.83%;left:0%;width:100.0%;
+height:32.83%'><span style='font-family:Arial;font-size:150%;color:#FFFF99'>geneous<br>
+</span></div>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:67.16%;left:7.95%;width:84.09%;
+height:32.83%'><span style='font-family:Arial;font-size:150%;color:#FFFF99;
+mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<div style='position:absolute;top:74.91%;left:29.0%;width:21.98%;height:21.73%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:4.06%;left:5.42%;width:89.15%;
+height:91.86%'>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:0%;left:0%;width:100.0%;
+height:79.64%'><span style='position:absolute;top:0%;left:.67%;width:99.32%'><span
+style='font-family:Arial;font-size:150%;color:#FFFF99'>Recombined </span></span><span
+style='position:absolute;top:25.55%;left:.67%;width:99.32%'><span
+style='font-family:Arial;font-size:150%;color:#FFFF99'>chromosomes </span></span><span
+style='position:absolute;top:51.11%;left:0%;width:100.0%'><span
+style='font-family:Arial;font-size:150%;color:#FFFF99'>are needed for </span></span><span
+style='position:absolute;top:75.55%;left:.67%;width:99.32%'><span
+style='font-family:Arial;font-size:150%;color:#FFFF99'>mapping<br>
+</span></span></div>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:80.53%;left:.67%;width:99.32%;
+height:19.46%'><span style='font-family:Arial;font-size:150%;color:#FFFF99;
+mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<div style='position:absolute;top:10.24%;left:25.56%;width:10.46%;height:9.71%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:9.09%;left:12.65%;width:87.34%;
+height:81.81%'>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:48.88%'><span
+style='font-family:Arial;font-size:150%;color:#FFFF99'>female<br>
+</span></div>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:51.11%;left:0%;width:84.05%;height:48.88%'><span
+style='font-family:Arial;font-size:150%;color:#FFFF99;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</div>
+</div>
+<div style='position:absolute;top:10.24%;left:64.5%;width:7.94%;height:9.71%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:9.09%;left:15.0%;width:83.33%;
+height:81.81%'>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:48.88%'><span
+style='font-family:Arial;font-size:150%;color:#FFFF99'>male<br>
+</span></div>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:51.11%;left:0%;width:84.0%;height:48.88%'><span
+style='font-family:Arial;font-size:150%;color:#FFFF99;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</div>
+</div>
+<div style='position:absolute;top:30.56%;left:78.01%;width:19.47%;height:9.71%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:16.36%;left:6.12%;width:93.19%;
+height:74.54%'>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:41.46%'><span
+style='font-family:Arial;font-size:117%;color:#FFFF99'>chromosome pair</span><span
+style='font-family:Arial;font-size:150%;color:#FFFF99;display:none'><br>
+</span></div>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:46.34%;left:0%;width:83.21%;height:53.65%'><span
+style='font-family:Arial;font-size:150%;color:#FFFF99;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</div>
+</div>
+<img border=0 src="slide0002_image041.png" style='position:absolute;top:31.09%;
+left:65.82%;width:12.84%;height:2.82%'>
+<div style='position:absolute;top:86.21%;left:3.97%;width:9.8%;height:14.13%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:5.0%;left:5.4%;width:90.54%;
+height:87.5%'>
+<div style='text-align:center;mso-line-spacing:"-134 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:0%;left:8.95%;width:82.08%;
+height:24.28%'><span style='font-family:Arial;font-size:117%;color:#E9EB5D'>Inbred<br>
+</span></div>
+<div style='text-align:center;mso-line-spacing:"-134 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:25.71%;left:0%;width:100.0%;
+height:24.28%'><span style='font-family:Arial;font-size:117%;color:#E9EB5D'>Isogenic<br>
+</span></div>
+<div style='text-align:center;mso-line-spacing:"-134 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:50.0%;left:4.47%;width:89.55%;
+height:24.28%'><span style='font-family:Arial;font-size:117%;color:#E9EB5D'>siblings</span><span
+style='font-family:Arial;font-size:117%;color:aqua;display:none'><br>
+</span></div>
+<div style='text-align:center;mso-line-spacing:"-134 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:75.71%;left:8.95%;width:82.08%;
+height:24.28%'><span style='font-family:Arial;font-size:117%;color:aqua;
+mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<img border=0 src="slide0002_image042.png" style='position:absolute;top:79.32%;
+left:83.84%;width:1.98%;height:11.83%'><img border=0
+src="slide0002_image043.png" style='position:absolute;top:84.8%;left:83.7%;
+width:1.85%;height:2.12%'><img border=0 src="slide0002_image044.png"
+style='position:absolute;top:79.85%;left:53.5%;width:1.98%;height:11.83%'><img
+border=0 src="slide0002_image045.png" style='position:absolute;top:83.92%;
+left:53.5%;width:1.98%;height:1.41%'><img border=0 src="slide0002_image046.png"
+style='position:absolute;top:80.21%;left:23.44%;width:1.98%;height:11.83%'>
+<div style='position:absolute;top:18.72%;left:43.04%;width:13.77%;height:9.54%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='mso-line-spacing:"-341 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17;position:absolute;top:11.11%;left:9.61%;width:90.38%;
+height:79.62%'><span style='font-family:Arial;font-size:300%;color:aqua'>B</span><span
+style='font-family:Arial;font-size:300%;color:#FFFF99'>X</span><span
+style='font-family:Arial;font-size:300%;color:#FF1911'>D</span></div>
+</div>
+<img border=0 src="slide0002_image047.png" style='position:absolute;top:27.2%;
+left:32.98%;width:31.39%;height:4.06%'><img border=0
+src="slide0002_image048.png" style='position:absolute;top:66.25%;left:60.92%;
+width:1.98%;height:3.18%'><img border=0 src="slide0002_image049.png"
+style='position:absolute;top:64.31%;left:15.89%;width:1.98%;height:5.3%'><img
+border=0 src="slide0002_image050.png" style='position:absolute;top:57.59%;
+left:75.62%;width:1.98%;height:5.65%'><img border=0 src="slide0002_image051.png"
+style='position:absolute;top:28.44%;left:48.87%;width:.92%;height:8.12%'><img
+border=0 src="slide0002_image052.png" style='position:absolute;top:62.19%;
+left:23.84%;width:3.57%;height:16.96%'><img border=0
+src="slide0002_image053.png" style='position:absolute;top:61.48%;left:63.17%;
+width:1.98%;height:8.12%'></div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>The next few slides
+  provide a short introduction to mapping the loci that are responsible for
+  variation in a trait such as App expression level. These modulatory regions
+  of the genome are sometimes called quantitative trait loci or QTLs. You may
+  want to do some independent reading on this topic if this is your first
+  exposure to QTL analysis.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>The genetic reference
+  population (GRP) of BXD recombinant inbred strains were originally generated
+  about 25 years ago by Benjamin Taylor at The Jackson Laboratory. He crossed
+  female C57BL/6J mice with male DBA/2J mice to generate the F1 and F2 progeny.
+  At the bottom of this slide we have schematized one chromosome pair from
+  three of the BXD RI strains.<span style="mso-spacerun: yes">&nbsp; </span>The
+  dashed vertical lines that lead to the final BXD RI lines involve 21 full sib
+  matings (about 7 years of breeding). Some lines die out during inbreeding.
+  For example, there is no longer any BXD3 strain.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>1. Over the last decade,
+  our group (Lu Lu and Rob Williams) and Jeremy Peirce and Lee Silver at
+  Princeton have enlarged Ben Taylor�s set. There are now just over 80 BXD
+  strains. They have all been genotyped using about 13,700 markers (SNPs and
+  microsatellites). These markers are used to define the �blue� and �red�
+  regions of the chromosomes as shown in the figure above.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>2. Chromosomes of RI GRPs
+  usually have about 4 times as many recombinations as those of F2 animals.
+  However, unlike an F2, both chromosomes of an RI are identical. Therefore, 50
+  RI strains contain as many recombinations as 100 F2 animals.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>3. BXD43 through BXD100
+  were generated using a special method that resulted in a further doubling of
+  the average recombination density per chromosome. The entire set of 80 BXDs
+  therefore contains as many recombinations as about 260 F2 animals.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0002_image002.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0002_image002.png
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diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0002_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0002_notes_pane.htm
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@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>The next few slides
+  provide a short introduction to mapping the loci that are responsible for
+  variation in a trait such as App expression level. These modulatory regions
+  of the genome are sometimes called quantitative trait loci or QTLs. You may
+  want to do some independent reading on this topic if this is your first
+  exposure to QTL analysis.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>The genetic reference
+  population (GRP) of BXD recombinant inbred strains were originally generated
+  about 25 years ago by Benjamin Taylor at The Jackson Laboratory. He crossed
+  female C57BL/6J mice with male DBA/2J mice to generate the F1 and F2 progeny.
+  At the bottom of this slide we have schematized one chromosome pair from
+  three of the BXD RI strains.<span style="mso-spacerun: yes">&nbsp; </span>The
+  dashed vertical lines that lead to the final BXD RI lines involve 21 full sib
+  matings (about 7 years of breeding). Some lines die out during inbreeding.
+  For example, there is no longer any BXD3 strain.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>1. Over the last decade,
+  our group (Lu Lu and Rob Williams) and Jeremy Peirce and Lee Silver at
+  Princeton have enlarged Ben Taylor�s set. There are now just over 80 BXD
+  strains. They have all been genotyped using about 13,700 markers (SNPs and
+  microsatellites). These markers are used to define the �blue� and �red�
+  regions of the chromosomes as shown in the figure above.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>2. Chromosomes of RI GRPs
+  usually have about 4 times as many recombinations as those of F2 animals.
+  However, unlike an F2, both chromosomes of an RI are identical. Therefore, 50
+  RI strains contain as many recombinations as 100 F2 animals.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>3. BXD43 through BXD100
+  were generated using a special method that resulted in a further doubling of
+  the average recombination density per chromosome. The entire set of 80 BXDs
+  therefore contains as many recombinations as about 260 F2 animals.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0003.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0003.htm
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index 00000000..2c4a0620
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0003.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
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+	height:4.5in !important;
+	font-size:76% !important;}
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+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0003.htm"
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+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
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+//-->
+</script><script for=window event=onload language=JavaScript><!--
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+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.png" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'><img
+border=0 src="slide0003_image054.png" style='position:absolute;top:40.45%;
+left:73.24%;width:14.56%;height:5.3%'>
+<div class=O style='position:absolute;top:40.81%;left:74.56%;width:11.92%;
+height:7.24%'>
+<div style='mso-line-spacing:"-126 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:60.97%'><span
+style='font-family:Gadget;font-size:150%;color:white'>aa<br>
+</span></div>
+<div style='mso-line-spacing:"-126 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:41.46%;left:0%;width:100.0%;height:60.97%'><span
+style='font-family:Gadget;font-size:150%;color:white;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</div>
+<img border=0 src="slide0003_image055.png" style='position:absolute;top:16.6%;
+left:73.24%;width:14.56%;height:5.3%'>
+<div class=O style='position:absolute;top:16.96%;left:74.56%;width:11.92%;
+height:7.24%'>
+<div style='mso-line-spacing:"-126 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:60.97%'><span
+style='font-family:Gadget;font-size:150%;color:white'>aaaa<br>
+</span></div>
+<div style='mso-line-spacing:"-126 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:41.46%;left:0%;width:100.0%;height:60.97%'><span
+style='font-family:Gadget;font-size:150%;color:white;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</div>
+<div style='position:absolute;top:20.31%;left:71.65%;width:25.96%;height:19.43%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:10.0%;left:5.1%;width:95.4%;
+height:84.54%'>
+<div style='mso-line-spacing:"-384 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16;position:absolute;top:0%;left:0%;width:100.0%;height:45.16%'><span
+style='font-size:267%;color:#E2EBF0'>D2 strain</span><span style='font-family:
+Palatino;font-size:333%;color:#FBFDB8;display:none'><br>
+</span></div>
+<div style='mso-line-spacing:"-384 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16;position:absolute;top:49.46%;left:0%;width:88.77%;height:50.53%'><span
+style='font-family:Palatino;font-size:333%;color:#FBFDB8;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<div style='position:absolute;top:43.81%;left:71.65%;width:25.56%;height:19.43%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:10.9%;left:5.18%;width:94.81%;
+height:84.54%'>
+<div style='mso-line-spacing:"-384 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16;position:absolute;top:0%;left:0%;width:100.0%;height:45.16%'><span
+style='font-size:267%;color:#F6BF69'>B6 strain</span><span style='font-family:
+Palatino;font-size:333%;color:#F6BF69;display:none'><br>
+</span></div>
+<div style='mso-line-spacing:"-384 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16;position:absolute;top:48.38%;left:0%;width:87.43%;height:50.53%'><span
+style='font-family:Palatino;font-size:333%;color:#F6BF69;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<img border=0 src="slide0003_image056.png" style='position:absolute;top:17.31%;
+left:31.25%;width:1.32%;height:42.22%'><img border=0
+src="slide0003_image057.png" style='position:absolute;top:40.63%;left:31.39%;
+width:39.86%;height:3.53%'>
+<div style='position:absolute;top:20.67%;left:38.27%;width:30.19%;height:26.32%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:6.04%;left:4.38%;width:92.1%;
+height:89.93%'>
+<div style='mso-line-spacing:"-320 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16;position:absolute;top:0%;left:0%;width:100.0%;height:58.2%'><span
+style='position:absolute;top:0%;left:0%;width:100.0%'><span style='font-size:
+233%;color:#E9EB5D'><i>amount of </i></span></span><span style='position:absolute;
+top:53.84%;left:0%;width:100.0%'><span style='font-size:233%;color:#E9EB5D'><i>transcript</i></span><span
+style='font-family:Palatino;font-size:367%;color:#E9EB5D;display:none'><br>
+</span></span></div>
+<div style='mso-line-spacing:"-422 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16;position:absolute;top:61.19%;left:0%;width:100.0%;height:38.8%'><span
+style='font-family:Palatino;font-size:367%;color:#E9EB5D;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<div style='position:absolute;top:6.0%;left:72.45%;width:21.05%;height:19.43%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:10.0%;left:6.28%;width:88.67%;
+height:84.54%'>
+<div style='mso-line-spacing:"-384 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16;position:absolute;top:0%;left:0%;width:100.0%;height:45.16%'><span
+style='font-size:267%;color:white'>4 </span><span style='font-size:233%;
+color:white'>units</span><span style='font-family:Palatino;font-size:333%;
+color:#E9EB5D;display:none'><br>
+</span></div>
+<div style='mso-line-spacing:"-384 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16;position:absolute;top:49.46%;left:0%;width:100.0%;height:50.53%'><span
+style='font-family:Palatino;font-size:333%;color:#E9EB5D;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<div style='position:absolute;top:29.5%;left:72.45%;width:21.05%;height:19.43%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:10.9%;left:6.28%;width:88.67%;
+height:84.54%'>
+<div style='mso-line-spacing:"-384 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16;position:absolute;top:0%;left:0%;width:100.0%;height:45.16%'><span
+style='font-size:267%;color:white'>2</span><span style='font-size:233%;
+color:white'> units</span><span style='font-family:Palatino;font-size:333%;
+color:#E9EB5D;display:none'><br>
+</span></div>
+<div style='mso-line-spacing:"-384 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16;position:absolute;top:48.38%;left:0%;width:100.0%;height:50.53%'><span
+style='font-family:Palatino;font-size:333%;color:#E9EB5D;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<img border=0 src="slide0003_image058.png" style='position:absolute;top:15.72%;
+left:31.25%;width:40.26%;height:5.47%'>
+<div class=O style='position:absolute;top:17.84%;left:9.93%;width:4.76%;
+height:16.43%'>
+<div style='mso-line-spacing:"-350 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:50.53%'><span
+style='font-size:300%;color:#E2EBF0'>D<br>
+</span></div>
+<div style='mso-line-spacing:"-350 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:49.46%;left:0%;width:83.33%;height:50.53%'><span
+style='font-size:300%;color:#E2EBF0;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+<div class=O style='position:absolute;top:17.84%;left:17.88%;width:4.23%;
+height:16.43%'>
+<div style='mso-line-spacing:"-350 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:50.53%'><span
+style='font-size:300%;color:#F6BF69'>B<br>
+</span></div>
+<div style='mso-line-spacing:"-350 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:49.46%;left:0%;width:84.37%;height:50.53%'><span
+style='font-size:300%;color:#F6BF69;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+<div style='position:absolute;top:79.5%;left:5.43%;width:104.1%;height:13.6%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=O style='mso-line-spacing:"-256 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17;position:absolute;top:3.89%;left:1.27%;width:98.72%;
+height:93.5%'><span style='position:absolute;top:0%;left:0%;width:100.0%'><span
+style='font-size:233%;color:#E2EBF0'>D</span><span style='font-size:233%;
+color:#E9EB5D'> </span><span style='font-size:200%;color:#E9EB5D'>and </span><span
+style='font-size:233%;color:#F6BF69'>B</span><span style='font-size:233%;
+color:#E9EB5D'> </span><span style='font-size:200%;color:#E9EB5D'>may be
+SNP-like variants in the promoter </span></span><span style='position:absolute;
+top:34.72%;left:0%;width:99.74%'><span style='font-size:200%;color:#E9EB5D'>itself
+(cis QTL) or in </span><span style='font-size:200%;color:#EAEC5E'>upstream
+genes (trans QTLs)</span><span style='font-size:300%;color:#E9EB5D'>.</span></span></div>
+</div>
+<div class=O style='position:absolute;top:7.59%;left:4.23%;width:22.78%;
+height:16.25%'>
+<div style='text-align:center;mso-line-spacing:"-233 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:0%;left:1.74%;width:97.09%;
+height:33.69%'><span style='font-size:200%;color:#E9EB5D'>UPSTREAM<br>
+</span></div>
+<div style='text-align:center;mso-line-spacing:"-233 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:32.6%;left:0%;width:100.0%;
+height:33.69%'><span style='font-size:200%;color:#E9EB5D'>modulators<br>
+</span></div>
+<div style='text-align:center;mso-line-spacing:"-233 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:66.3%;left:4.65%;width:90.69%;
+height:33.69%'><span style='font-size:200%;color:#E9EB5D;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</div>
+<div style='position:absolute;top:7.59%;left:44.5%;width:16.95%;height:17.84%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:3.96%;left:7.03%;width:85.15%;
+height:92.07%'>
+<div style='mso-line-spacing:"-350 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16;position:absolute;top:0%;left:0%;width:100.0%;height:50.53%'><span
+style='font-size:300%;color:#E2EBF0'>High<br>
+</span></div>
+<div style='mso-line-spacing:"-350 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16;position:absolute;top:49.46%;left:0%;width:100.0%;height:50.53%'><span
+style='font-size:300%;color:#E2EBF0;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<div style='position:absolute;top:63.78%;left:8.74%;width:6.35%;height:17.84%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=O style='position:absolute;top:3.96%;left:20.83%;width:75.0%;
+height:92.07%'>
+<div style='mso-line-spacing:"-350 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:50.53%'><span
+style='font-size:300%;color:#E2EBF0'>D<br>
+</span></div>
+<div style='mso-line-spacing:"-350 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:49.46%;left:0%;width:83.33%;height:50.53%'><span
+style='font-size:300%;color:#E2EBF0;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<div style='position:absolute;top:63.78%;left:15.09%;width:5.96%;height:17.84%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=O style='position:absolute;top:3.96%;left:20.0%;width:71.11%;
+height:92.07%'>
+<div style='mso-line-spacing:"-350 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:50.53%'><span
+style='font-size:300%;color:#F6BF69'>B<br>
+</span></div>
+<div style='mso-line-spacing:"-350 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:49.46%;left:0%;width:84.37%;height:50.53%'><span
+style='font-size:300%;color:#F6BF69;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<div style='position:absolute;top:71.02%;left:7.54%;width:16.02%;height:12.54%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=O style='position:absolute;top:5.63%;left:7.43%;width:91.73%;
+height:87.32%'>
+<div style='mso-line-spacing:"-233 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:50.0%'><span
+style='font-size:200%;color:#E9EB5D'><i>cis QTL</i></span><span
+style='font-size:200%;color:#E9EB5D;display:none'><br>
+</span></div>
+<div style='mso-line-spacing:"-233 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:48.38%;left:0%;width:82.88%;height:50.0%'><span
+style='font-size:200%;color:#E9EB5D;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<img border=0 src="slide0003_image059.png" style='position:absolute;top:57.24%;
+left:-1.05%;width:101.98%;height:7.59%'>
+<div class=O style='position:absolute;top:44.16%;left:47.15%;width:9.4%;
+height:12.72%'>
+<div style='mso-line-spacing:"-272 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:51.38%'><span
+style='font-size:233%;color:#F6BF69'>Low<br>
+</span></div>
+<div style='mso-line-spacing:"-272 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:50.0%;left:0%;width:83.09%;height:51.38%'><span
+style='font-size:233%;color:#F6BF69;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+<div style='position:absolute;top:58.12%;left:.79%;width:113.37%;height:6.36%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=O style='mso-line-spacing:"-200 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17;position:absolute;top:11.11%;left:1.16%;width:98.83%;
+height:75.0%'><span style='font-family:Gadget;font-size:167%;color:white'>&gt;&gt;&gt;&gt;PROMOTER--ATG-Exon1-Intron1-Exon2-Intron2
+- etc-3'UTR &gt;&gt;&gt;&gt;&gt;</span></div>
+</div>
+<img border=0 src="slide0003_image060.png" style='position:absolute;top:37.98%;
+left:8.6%;width:13.77%;height:20.67%'>
+<div class=O style='position:absolute;top:40.28%;left:10.99%;width:1.72%;
+height:11.48%'>
+<div style='text-align:center;mso-line-spacing:"-269 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:0%;left:0%;width:100.0%;
+height:46.15%'><span style='font-family:"\30D2\30E9\30AE\30CE\89D2\30B4 Pro W3";
+font-size:233%;color:white'><b>&#4;</b></span><span style='font-family:Palatino;
+font-size:233%;color:white;display:none'><b><br>
+</b></span></div>
+<div style='text-align:center;mso-line-spacing:"-269 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:50.76%;left:7.69%;width:84.61%;
+height:50.76%'><span style='font-family:Palatino;font-size:233%;color:white;
+mso-special-format:lastCR;display:none'><b><br>
+</b></span></div>
+</div>
+<div class=O style='position:absolute;top:40.63%;left:18.41%;width:1.72%;
+height:11.48%'>
+<div style='text-align:center;mso-line-spacing:"-269 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:0%;left:0%;width:100.0%;
+height:46.15%'><span style='font-family:"\30D2\30E9\30AE\30CE\89D2\30B4 Pro W3";
+font-size:233%;color:white'><b>&#4;</b></span><span style='font-family:Palatino;
+font-size:233%;color:white;display:none'><b><br>
+</b></span></div>
+<div style='text-align:center;mso-line-spacing:"-269 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:49.23%;left:7.69%;width:84.61%;
+height:50.76%'><span style='font-family:Palatino;font-size:233%;color:white;
+mso-special-format:lastCR;display:none'><b><br>
+</b></span></div>
+</div>
+<img border=0 src="slide0003_image061.png" style='position:absolute;top:33.74%;
+left:8.6%;width:13.77%;height:20.67%'>
+<div class=O style='position:absolute;top:36.39%;left:18.41%;width:1.72%;
+height:11.48%'>
+<div style='text-align:center;mso-line-spacing:"-269 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:0%;left:0%;width:100.0%;
+height:46.15%'><span style='font-family:"\30D2\30E9\30AE\30CE\89D2\30B4 Pro W3";
+font-size:233%;color:white'><b>&#4;</b></span><span style='font-family:Palatino;
+font-size:233%;color:white;display:none'><b><br>
+</b></span></div>
+<div style='text-align:center;mso-line-spacing:"-269 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:49.23%;left:7.69%;width:84.61%;
+height:50.76%'><span style='font-family:Palatino;font-size:233%;color:white;
+mso-special-format:lastCR;display:none'><b><br>
+</b></span></div>
+</div>
+<div class=O style='position:absolute;top:36.04%;left:10.99%;width:1.72%;
+height:11.48%'>
+<div style='text-align:center;mso-line-spacing:"-269 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:0%;left:0%;width:100.0%;
+height:46.15%'><span style='font-family:"\30D2\30E9\30AE\30CE\89D2\30B4 Pro W3";
+font-size:233%;color:white'><b>&#4;</b></span><span style='font-family:Palatino;
+font-size:233%;color:white;display:none'><b><br>
+</b></span></div>
+<div style='text-align:center;mso-line-spacing:"-269 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:49.23%;left:7.69%;width:84.61%;
+height:50.76%'><span style='font-family:Palatino;font-size:233%;color:white;
+mso-special-format:lastCR;display:none'><b><br>
+</b></span></div>
+</div>
+<div class=O style='position:absolute;top:37.8%;left:20.66%;width:.13%;
+height:12.01%'>
+<div style='text-align:center;mso-line-spacing:"-269 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:0%;left:0%;width:100.0%;
+height:48.52%'><span style='font-family:Palatino;font-size:233%;color:white;
+display:none'><b><br>
+</b></span></div>
+<div style='text-align:center;mso-line-spacing:"-269 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17;position:absolute;top:51.47%;left:0%;width:100.0%;
+height:48.52%'><span style='font-family:Palatino;font-size:233%;color:white;
+mso-special-format:lastCR;display:none'><b><br>
+</b></span></div>
+</div>
+<img border=0 src="slide0003_image062.png" style='position:absolute;top:27.38%;
+left:4.9%;width:21.45%;height:21.37%'>
+<div style='position:absolute;top:27.38%;left:5.03%;width:20.92%;height:12.54%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=O style='position:absolute;top:5.63%;left:6.32%;width:94.3%;
+height:87.32%'>
+<div style='mso-line-spacing:"-233 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:50.0%'><span
+style='font-size:200%;color:#E9EB5D'><i>trans QTL</i></span><span
+style='font-size:200%;color:#E9EB5D;display:none'><br>
+</span></div>
+<div style='mso-line-spacing:"-233 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:48.38%;left:0%;width:83.22%;height:50.0%'><span
+style='font-size:200%;color:#E9EB5D;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+</div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>This slide is
+  illustrates two major types of QTLs that modulate variability in
+  transcript-relative steady state abundance.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>1. cis QTLs are defined
+  as QTLs that are closely linked to the gene whose transcript is the measured
+  trait. For example, a polymorphism in the promoter that affects binding of a
+  transcription factor. However, cis QTLs can be far upstream or downstream polymorphisms
+  in enhancers or may be in 3� UTR binding sites that affect message stability.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>2. trans QTLs map far
+  enough away from the location of the gene that gives rise to the transcript
+  that is being measured so that we can be fairly certain that the QTL is not
+  in the gene itself. The most blatant type of trans QTL would be a
+  polymorphism in a transcription factor. But in the majority of cases, the
+  trans QTLs can be far removed in a mechanistic sense from the actual events
+  modulating transcript abundance. That is why there are three overlapping
+  arrows in the figure.<span style="mso-spacerun: yes">&nbsp; </span>The way in
+  which an upstream polymorphism influences a downstream difference in mRNA
+  abundance can be indirect. Effects can:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3><span
+  style="mso-spacerun: yes">&nbsp;&nbsp; </span>a.<span style="mso-spacerun:
+  yes">&nbsp; </span>cross tissue types (a polymorphic liver enzyme may affect
+  CNS gene expression)</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3><span
+  style="mso-spacerun: yes">&nbsp;&nbsp; </span>b.<span style="mso-spacerun:
+  yes">&nbsp; </span>cross time (the modulator is only expressed for one day
+  during development but has permanent effects in adults)</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3><span
+  style="mso-spacerun: yes">&nbsp;&nbsp; </span>c.<span style="mso-spacerun:
+  yes">&nbsp; </span>may be contingent on environmental factors (heat shock may
+  trigger the expression of a polymorphic factor that affects mRNA abundance).</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0003_image005.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0003_image005.png
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new file mode 100755
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new file mode 100755
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new file mode 100755
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new file mode 100755
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new file mode 100755
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diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0003_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0003_notes_pane.htm
new file mode 100755
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--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0003_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>This slide is
+  illustrates two major types of QTLs that modulate variability in
+  transcript-relative steady state abundance.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>1. cis QTLs are defined
+  as QTLs that are closely linked to the gene whose transcript is the measured
+  trait. For example, a polymorphism in the promoter that affects binding of a
+  transcription factor. However, cis QTLs can be far upstream or downstream polymorphisms
+  in enhancers or may be in 3� UTR binding sites that affect message stability.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>2. trans QTLs map far
+  enough away from the location of the gene that gives rise to the transcript
+  that is being measured so that we can be fairly certain that the QTL is not
+  in the gene itself. The most blatant type of trans QTL would be a
+  polymorphism in a transcription factor. But in the majority of cases, the
+  trans QTLs can be far removed in a mechanistic sense from the actual events
+  modulating transcript abundance. That is why there are three overlapping
+  arrows in the figure.<span style="mso-spacerun: yes">&nbsp; </span>The way in
+  which an upstream polymorphism influences a downstream difference in mRNA
+  abundance can be indirect. Effects can:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2><span
+  style="mso-spacerun: yes">&nbsp;&nbsp; </span>a.<span style="mso-spacerun:
+  yes">&nbsp; </span>cross tissue types (a polymorphic liver enzyme may affect
+  CNS gene expression)</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2><span
+  style="mso-spacerun: yes">&nbsp;&nbsp; </span>b.<span style="mso-spacerun:
+  yes">&nbsp; </span>cross time (the modulator is only expressed for one day
+  during development but has permanent effects in adults)</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2><span
+  style="mso-spacerun: yes">&nbsp;&nbsp; </span>c.<span style="mso-spacerun:
+  yes">&nbsp; </span>may be contingent on environmental factors (heat shock may
+  trigger the expression of a polymorphic factor that affects mRNA abundance).</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0004.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0004.htm
new file mode 100755
index 00000000..8f72f910
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0004.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content="Aug-15-05: Discovering upstream modulatory loci">
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0004.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.png" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'><img
+border=0 src="slide0004_image063.png" style='position:absolute;top:38.86%;
+left:5.03%;width:84.9%;height:45.75%'>
+<div style='position:absolute;top:5.47%;left:2.51%;width:93.64%;height:8.65%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='mso-line-spacing:"-358 0 -1";position:absolute;top:20.4%;
+left:1.41%;width:97.31%;height:75.51%'><span style='font-family:Verdana;
+font-size:64%'>Discovering upstream modulatory loci</span><span
+style='font-family:Verdana;font-size:73%;mso-special-format:lastCR;display:
+none'><i><br>
+</i></span></div>
+</div>
+<img border=0 src="slide0004_image064.png" style='position:absolute;top:20.31%;
+left:18.01%;width:19.2%;height:25.97%'><img border=0
+src="slide0004_image065.png" style='position:absolute;top:32.5%;left:78.01%;
+width:19.2%;height:25.97%'></div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>Please bring the Trait
+  Data and Analysis window to the front and look for the Interval Mapping
+  button. Confirm that you are back to the trait amyloid beta precursor
+  protein.<span style="mso-spacerun: yes">&nbsp; </span>If so, then just click
+  the button.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>Notice that the default
+  for:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>Select Chrs (chromosomes)
+  is ALL</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>Select Mapping Scale is
+  set to GENETIC</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>Options: Permutation test
+  YES<span style="mso-spacerun: yes">&nbsp; </span>(2000 is the default number)</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>Options: Bootstrap test
+  YES (2000 is the default number)</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0004_image010.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0004_image010.png
new file mode 100755
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new file mode 100755
index 00000000..b8e67f4d
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+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0004_image012.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0004_image063.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0004_image063.png
new file mode 100755
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+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0004_image063.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0004_image064.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0004_image064.png
new file mode 100755
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--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0004_image064.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0004_image065.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0004_image065.png
new file mode 100755
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diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0004_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0004_notes_pane.htm
new file mode 100755
index 00000000..b1988954
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0004_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Please bring the Trait
+  Data and Analysis window to the front and look for the Interval Mapping
+  button. Confirm that you are back to the trait amyloid beta precursor
+  protein.<span style="mso-spacerun: yes">&nbsp; </span>If so, then just click
+  the button.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Notice that the default
+  for:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Select Chrs (chromosomes)
+  is ALL</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Select Mapping Scale is
+  set to GENETIC</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Options: Permutation test
+  YES<span style="mso-spacerun: yes">&nbsp; </span>(2000 is the default number)</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Options: Bootstrap test
+  YES (2000 is the default number)</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0005.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0005.htm
new file mode 100755
index 00000000..b2dc8582
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0005.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Aug-15-05: WebQTL searches for upstream controllers">
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0005.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.png" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:-.53%;left:1.72%;width:101.19%;height:8.65%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='mso-line-spacing:"-358 0 -1";mso-margin-left-alt:233;
+mso-text-indent-alt:0;position:absolute;top:18.36%;left:.91%;width:98.95%;
+height:75.51%'><span style='font-family:Verdana;font-size:64%'><i>WebQTL
+searches for upstream controllers</i></span><span style='font-family:Verdana;
+font-size:73%;mso-special-format:lastCR;display:none'><i><br>
+</i></span></div>
+</div>
+<div style='position:absolute;top:71.02%;left:34.96%;width:45.96%;height:19.78%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:3.57%;left:2.3%;width:97.69%;
+height:91.96%'><span style='position:absolute;top:0%;left:0%;width:98.82%'><span
+style='font-size:167%;color:#E9EB5D'><i>App maps on Chr 16 (blue </i></span></span><span
+style='position:absolute;top:25.24%;left:0%;width:100.0%'><span
+style='font-size:167%;color:#E9EB5D'><i>arrow points to the orange </i></span></span><span
+style='position:absolute;top:49.51%;left:0%;width:86.72%'><span
+style='font-size:167%;color:#E9EB5D'><i>triangle) but the best </i></span></span><span
+style='position:absolute;top:74.75%;left:0%;width:86.72%'><span
+style='font-size:167%;color:#E9EB5D'><i>locus is on Chr 7.</i></span><span
+style='font-size:233%;color:#E9EB5D;mso-special-format:lastCR;display:none'><i><br>
+</i></span></span></div>
+</div>
+<img border=0 src="slide0005_image066.png" style='position:absolute;top:8.83%;
+left:1.19%;width:98.27%;height:53.88%'><img border=0
+src="slide0005_image067.png" style='position:absolute;top:46.64%;left:15.76%;
+width:15.89%;height:53.35%'><img border=0 src="slide0005_image068.png"
+style='position:absolute;top:46.64%;left:80.0%;width:10.99%;height:53.35%'><img
+border=0 src="slide0005_image069.png" style='position:absolute;top:41.34%;
+left:76.02%;width:11.65%;height:22.79%'><img border=0
+src="slide0005_image070.png" style='position:absolute;top:41.51%;left:29.13%;
+width:12.71%;height:24.38%'></div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>This is a major output
+  type: a so-called full-genome interval map.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>The X-axis represents all
+  19 autosomes and the X chromosome as if they were laid end to end with short
+  gaps between the telomere of one chromosome and the centromere of the next
+  chromosome (mouse chromosomes only have a single long arm and the centromere
+  represents the origin of each chromosome for numerical purpose: 0
+  centimorgans at almost 0 megabases). The blue labels along the bottom of the
+  figure list a subset of the 3795 markers that were used in mapping.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>The thick blue wavy line
+  running across chromosomes summarizes the strength of association between
+  variation in the phenotype (App expression differences) and the two genotypes
+  of all markers and the intervals between markers (hence, interval mapping).<span
+  style="mso-spacerun: yes">&nbsp; </span>The height of the wave (blue Y-axis
+  to the left) provides the likelihood ratio statistic (LRS). Divide by 4.61 to
+  convert these values to LOD scores.<span style="mso-spacerun: yes">&nbsp;
+  </span>Or you can read them as a chi-square-like statistic.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>The red line and the red
+  axis to the far right provide an estimate of the effect that a QTL has on
+  expression of App (this estimate of the so-called additive effect tends to be
+  too high). If the red line is below the X-axis then this means that the allele
+  inherited from C57BL/6J (B6 or B) at a particular marker is associated with
+  higher values. If the red line is above the X-axis then the DBA/2J allele (D2
+  or D) is associated with higher trait values. Multiply the additive effect
+  size by 2 to estimate the difference between the set of strains that have the
+  B/B genotype and those that have the D/D genotype at a specific marker. For
+  example, on distal Chr 7 the red line peaks at a value of about 0.2. That
+  means that this region of chromosome 2 is responsible for a 0.4 unit
+  expression difference between B/B strains and the D/D strains.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>The yellow histogram bars:
+  These summarize the results of a whole-genome bootstrap of the trait that is
+  performed 1000 times. What is a bootstrap? A bootstrap provides a method to
+  evaluate whether results are robust. If we drop out one strain, do we still
+  get the same results? When mapping quantitative traits, each strain normally
+  gets one equally weighted vote. But using the bootstrap procedure, we give
+  each strain a random weighting factor of between 0 and 1.<span
+  style="mso-spacerun: yes">&nbsp; </span>We then remap the trait and find THE
+  SINGLE BEST LRS VALUE per bootstrap. We do this 1000 times. In this example,
+  most bootstrap results cluster on Chr 3 and Chr 7 under the LRS peaks. That
+  is somewhat reassuring. But notice that a substantial number of bootstrap are
+  scattered around on other chromosomes. About 30% of the bootstrap resamples
+  have a peak on Chr 7. That is pretty good, but does makes us realize that the
+  sample we are working with is still quite small and fragile.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>The horizontal dashed
+  lines at 10.5 and 17.3 are the likelihood ratio statistic (LRS) values
+  associated with the suggestive and significant genome-wide probabilities that
+  were established by permutations of phenotypes across genotypes. We shuffle
+  randomly 2000 times and obtain a distribution of peak LRS scores to generate
+  a null distribution. Five percent of the time, one of these permuted data
+  sets will have a peak LRS higher than 17.3. We call that level the 0.05
+  significance threshold for a whole genome scan. The p = 0.67 point is the
+  suggestive level, and corresponds to the green dashed line.<span
+  style="mso-spacerun: yes">&nbsp; </span>These thresholds are conservative for
+  transcripts that have expression variation that is highly heritable. The putative
+  or suggestive QTL on Chr 3 is probably more than just suggestive.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>One other point: the
+  mapping procedure we use is computationally very fast, but it is relatively
+  simple. We are not looking for gene-gene interactions and we are not fitting
+  multiple QTLs in combinations. Consider this QTL analysis a first pass that
+  will highlight hot spots and warm spots that are worth following up on using
+  more sophisticated models.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>CLICKABLE REGIONS:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>1. If you click on the
+  Chromosome number then you will generate a new map just for that chromosome.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>2. If you click on the
+  body of the map, say on the blue line, then you will generate a view on a 10
+  Mb window of that part of the genome from the UCSC Genome Browser web site.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>3. If you click on a
+  marker symbol, then you will generate a new Trait data and Analysis window
+  with the genotypes loaded into the window just like any other trait. More on
+  this in Section 3.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>4. You can drag these maps
+  off of the browser window and onto your desktop. They will be saved as PNG or
+  PDF files. You can import them into Photoshop or other programs.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>5. There is also an option
+  at the bottom of the page to download a 2X higher resolution image of this
+  plot for papers and presentations.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>6. You can also download
+  the results of the analysis in a text format</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0005_image013.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0005_image013.png
new file mode 100755
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--- /dev/null
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diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0005_image014.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0005_image014.png
new file mode 100755
index 00000000..e49ba16e
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0005_image014.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0005_image066.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0005_image066.png
new file mode 100755
index 00000000..5ab7794c
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0005_image066.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0005_image067.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0005_image067.png
new file mode 100755
index 00000000..c26d4792
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0005_image067.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0005_image068.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0005_image068.png
new file mode 100755
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--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0005_image068.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0005_image069.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0005_image069.png
new file mode 100755
index 00000000..6ec88720
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0005_image069.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0005_image070.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0005_image070.png
new file mode 100755
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--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0005_image070.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0005_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0005_notes_pane.htm
new file mode 100755
index 00000000..279e38cf
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0005_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>This is a major output
+  type: a so-called full-genome interval map.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>The X-axis represents all
+  19 autosomes and the X chromosome as if they were laid end to end with short
+  gaps between the telomere of one chromosome and the centromere of the next
+  chromosome (mouse chromosomes only have a single long arm and the centromere
+  represents the origin of each chromosome for numerical purpose: 0
+  centimorgans at almost 0 megabases). The blue labels along the bottom of the
+  figure list a subset of the 3795 markers that were used in mapping.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>The thick blue wavy line
+  running across chromosomes summarizes the strength of association between
+  variation in the phenotype (App expression differences) and the two genotypes
+  of all markers and the intervals between markers (hence, interval mapping).<span
+  style="mso-spacerun: yes">&nbsp; </span>The height of the wave (blue Y-axis
+  to the left) provides the likelihood ratio statistic (LRS). Divide by 4.61 to
+  convert these values to LOD scores.<span style="mso-spacerun: yes">&nbsp;
+  </span>Or you can read them as a chi-square-like statistic.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>The red line and the red
+  axis to the far right provide an estimate of the effect that a QTL has on
+  expression of App (this estimate of the so-called additive effect tends to be
+  too high). If the red line is below the X-axis then this means that the allele
+  inherited from C57BL/6J (B6 or B) at a particular marker is associated with
+  higher values. If the red line is above the X-axis then the DBA/2J allele (D2
+  or D) is associated with higher trait values. Multiply the additive effect
+  size by 2 to estimate the difference between the set of strains that have the
+  B/B genotype and those that have the D/D genotype at a specific marker. For
+  example, on distal Chr 7 the red line peaks at a value of about 0.2. That
+  means that this region of chromosome 2 is responsible for a 0.4 unit
+  expression difference between B/B strains and the D/D strains.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>The yellow histogram bars:
+  These summarize the results of a whole-genome bootstrap of the trait that is
+  performed 1000 times. What is a bootstrap? A bootstrap provides a method to
+  evaluate whether results are robust. If we drop out one strain, do we still
+  get the same results? When mapping quantitative traits, each strain normally
+  gets one equally weighted vote. But using the bootstrap procedure, we give
+  each strain a random weighting factor of between 0 and 1.<span
+  style="mso-spacerun: yes">&nbsp; </span>We then remap the trait and find THE
+  SINGLE BEST LRS VALUE per bootstrap. We do this 1000 times. In this example,
+  most bootstrap results cluster on Chr 3 and Chr 7 under the LRS peaks. That
+  is somewhat reassuring. But notice that a substantial number of bootstrap are
+  scattered around on other chromosomes. About 30% of the bootstrap resamples
+  have a peak on Chr 7. That is pretty good, but does makes us realize that the
+  sample we are working with is still quite small and fragile.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>The horizontal dashed
+  lines at 10.5 and 17.3 are the likelihood ratio statistic (LRS) values
+  associated with the suggestive and significant genome-wide probabilities that
+  were established by permutations of phenotypes across genotypes. We shuffle
+  randomly 2000 times and obtain a distribution of peak LRS scores to generate
+  a null distribution. Five percent of the time, one of these permuted data
+  sets will have a peak LRS higher than 17.3. We call that level the 0.05
+  significance threshold for a whole genome scan. The p = 0.67 point is the
+  suggestive level, and corresponds to the green dashed line.<span
+  style="mso-spacerun: yes">&nbsp; </span>These thresholds are conservative for
+  transcripts that have expression variation that is highly heritable. The putative
+  or suggestive QTL on Chr 3 is probably more than just suggestive.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>One other point: the
+  mapping procedure we use is computationally very fast, but it is relatively
+  simple. We are not looking for gene-gene interactions and we are not fitting
+  multiple QTLs in combinations. Consider this QTL analysis a first pass that
+  will highlight hot spots and warm spots that are worth following up on using
+  more sophisticated models.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>CLICKABLE REGIONS:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>1. If you click on the
+  Chromosome number then you will generate a new map just for that chromosome.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>2. If you click on the
+  body of the map, say on the blue line, then you will generate a view on a 10
+  Mb window of that part of the genome from the UCSC Genome Browser web site.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>3. If you click on a
+  marker symbol, then you will generate a new Trait data and Analysis window
+  with the genotypes loaded into the window just like any other trait. More on
+  this in Section 3.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>4. You can drag these maps
+  off of the browser window and onto your desktop. They will be saved as PNG or
+  PDF files. You can import them into Photoshop or other programs.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>5. There is also an option
+  at the bottom of the page to download a 2X higher resolution image of this
+  plot for papers and presentations.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>6. You can also download
+  the results of the analysis in a text format</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0006.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0006.htm
new file mode 100755
index 00000000..f647c55a
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0006.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Aug-15-05: Genetic versus Physical maps for App expression">
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0006.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.png" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:-.53%;left:1.72%;width:116.02%;height:8.65%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='mso-line-spacing:"-358 0 -1";mso-margin-left-alt:233;
+mso-text-indent-alt:0;position:absolute;top:18.36%;left:.79%;width:99.2%;
+height:75.51%'><span style='font-family:Verdana;font-size:64%'><i>Genetic
+versus Physical maps for App expression</i></span><span style='font-family:
+Verdana;font-size:73%;mso-special-format:lastCR;display:none'><i><br>
+</i></span></div>
+</div>
+<img border=0 src="slide0006_image071.png" style='position:absolute;top:8.83%;
+left:1.72%;width:98.27%;height:39.92%'><img border=0
+src="slide0006_image072.png" style='position:absolute;top:35.51%;left:1.85%;
+width:98.27%;height:54.06%'>
+<div class=O style='position:absolute;top:91.69%;left:5.96%;width:95.23%;
+height:7.42%'><span style='position:absolute;top:0%;left:0%;width:100.0%'><span
+style='font-size:117%;color:#E9EB5D'><i>The difference between genetic and
+physical scale is analogous to measuring the </i></span></span><span
+style='position:absolute;top:42.85%;left:0%;width:96.66%'><span
+style='font-size:117%;color:#E9EB5D'><i>separation between New York and Boston
+in either travel hours or kilometers</i></span><span style='font-size:150%;
+color:#E9EB5D'><i>.</i></span><span style='font-size:167%;color:#E9EB5D;
+mso-special-format:lastCR;display:none'><i><br>
+</i></span></span></div>
+</div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>The map on the top has an
+  X-axis scale based on frequency of recombinations events between markers (B
+  to D transitions, see slide 19 for a color-coded example). These so-called
+  genetic maps are scaled in centimorgan (recombinations per 100 gametes). In contrast,
+  the physical map shown below the genetic map has an X-axis scale based on DNA
+  length measured in nucleotides or base-pairs. Notice the large difference
+  between the two maps in the size of Chr 19 (large on the genetic scale but
+  small on the physical scale).</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>Also notice the large
+  difference in the width of the chromosome 7 QTL peak. In mice, recombinations
+  occur with higher frequency toward the telomeric side (right side) of each
+  chromosome. As a result, genetic maps are stretched out more toward the
+  telomere relative to a physical map. The QTL on distal Chr 7 is therefore
+  actually more precisely mapped than might appear looking at the genetic map.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>The physical scale is
+  becoming more useful than the genetic scale primarily because many other data
+  types can be easily superimposed on a physical map. You will see more
+  examples in the next several slides.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0006_image015.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0006_image015.png
new file mode 100755
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diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0006_image071.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0006_image071.png
new file mode 100755
index 00000000..0e63f836
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+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0006_image071.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0006_image072.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0006_image072.png
new file mode 100755
index 00000000..3c44c2ab
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diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0006_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0006_notes_pane.htm
new file mode 100755
index 00000000..c1f7d244
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0006_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>The map on the top has an
+  X-axis scale based on frequency of recombinations events between markers (B
+  to D transitions, see slide 19 for a color-coded example). These so-called
+  genetic maps are scaled in centimorgan (recombinations per 100 gametes). In contrast,
+  the physical map shown below the genetic map has an X-axis scale based on DNA
+  length measured in nucleotides or base-pairs. Notice the large difference
+  between the two maps in the size of Chr 19 (large on the genetic scale but
+  small on the physical scale).</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Also notice the large
+  difference in the width of the chromosome 7 QTL peak. In mice, recombinations
+  occur with higher frequency toward the telomeric side (right side) of each
+  chromosome. As a result, genetic maps are stretched out more toward the
+  telomere relative to a physical map. The QTL on distal Chr 7 is therefore
+  actually more precisely mapped than might appear looking at the genetic map.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>The physical scale is
+  becoming more useful than the genetic scale primarily because many other data
+  types can be easily superimposed on a physical map. You will see more
+  examples in the next several slides.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0007.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0007.htm
new file mode 100755
index 00000000..01fb76a9
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0007.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content="Aug-15-05: Physical map for distal chromosome 7">
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0007.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.png" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:-.53%;left:1.72%;width:101.05%;height:8.65%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='mso-line-spacing:"-358 0 -1";mso-margin-left-alt:233;
+mso-text-indent-alt:0;position:absolute;top:18.36%;left:.91%;width:97.9%;
+height:75.51%'><span style='font-family:Verdana;font-size:64%'>Physical map for
+distal chromosome 7</span><span style='font-family:Verdana;font-size:73%;
+mso-special-format:lastCR;display:none'><i><br>
+</i></span></div>
+</div>
+<div style='position:absolute;top:7.77%;left:5.82%;width:94.03%;height:6.18%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:11.42%;left:1.12%;width:98.87%;
+height:74.28%'><span style='font-size:167%;color:#E9EB5D'>Distal Chr 7 from
+~120 and 132 Mb may modulate</span><span style='font-size:167%;color:#E9EB5D'><i>
+App</i></span><span style='font-size:200%;color:#E9EB5D;mso-special-format:
+lastCR;display:none'><i><br>
+</i></span></div>
+</div>
+<img border=0 src="slide0007_image073.png" style='position:absolute;top:93.28%;
+left:6.62%;width:75.23%;height:3.71%'><img border=0 src="slide0007_image075.png"
+style='position:absolute;top:15.54%;left:6.62%;width:68.34%;height:75.61%'></div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>Physical map of variation
+  in App expression in brain on distal Chr 7 (a blow up of the whole-genome map
+  on the previous slide).</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Arial size=3>1.</font><font face=Verdana
+  size=3> You can now see that the X-axis is on a physical scale of megabases
+  (Mb). The QTL peak is roughly between 120 and 132 Mb.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>2. The small irregular
+  colored blocks and marks toward the top of the map mark the locations of
+  genes superimposed on the physical map. Neighboring genes are offset slightly
+  in the vertical axis for display purpose. Note one region of very high gene
+  density from about 120 to 123 Mb.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>3. The orange hash marks
+  along the X-axis represent the number of single nucleotide polymorphisms that
+  distinguish the two parental strains (C57BL/6J and DBA/2J) from each other.
+  We call this the SNP seismograph track (see Glossary for more details). Regions
+  with low numbers of SNPs have closely matched sequences and are less likely
+  to contain QTLs.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>4. As before, the thin red
+  line shows the additive effect size. By convention the positive values
+  signify the D alleles are associated with higher expression of App in this
+  region of Chr 7 than the B alleles. The maximum effect size is about +0.20
+  log2 expression units per D allele. The differences been the BB and DD
+  genotypes (BB and DD because each strain has two alleles; one per chromosome)
+  is therefore about 2^0.4 = 1.32 or a 32% increment in DD relative to BB at
+  this locus.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>5. If you scroll just
+  under the Physical Map you will see text that reads �DISPLAY from XXX Mb TO
+  YYY Mb�..�<span style="mso-spacerun: yes">&nbsp; </span>These physical maps
+  are zoomable, a feature we will exploit to evaluate candidate genes in this
+  QTL interval.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0007_image016.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0007_image016.png
new file mode 100755
index 00000000..53a17c76
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+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0007_image016.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0007_image017.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0007_image017.png
new file mode 100755
index 00000000..308c4df0
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+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0007_image017.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0007_image073.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0007_image073.png
new file mode 100755
index 00000000..c0174c3f
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0007_image073.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0007_image075.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0007_image075.png
new file mode 100755
index 00000000..9a3e3264
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+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0007_image075.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0007_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0007_notes_pane.htm
new file mode 100755
index 00000000..24c42724
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0007_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Physical map of variation
+  in App expression in brain on distal Chr 7 (a blow up of the whole-genome map
+  on the previous slide).</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Arial size=2>1.</font><font face=Verdana
+  size=2> You can now see that the X-axis is on a physical scale of megabases
+  (Mb). The QTL peak is roughly between 120 and 132 Mb.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>2. The small irregular
+  colored blocks and marks toward the top of the map mark the locations of
+  genes superimposed on the physical map. Neighboring genes are offset slightly
+  in the vertical axis for display purpose. Note one region of very high gene
+  density from about 120 to 123 Mb.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>3. The orange hash marks
+  along the X-axis represent the number of single nucleotide polymorphisms that
+  distinguish the two parental strains (C57BL/6J and DBA/2J) from each other.
+  We call this the SNP seismograph track (see Glossary for more details). Regions
+  with low numbers of SNPs have closely matched sequences and are less likely
+  to contain QTLs.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>4. As before, the thin red
+  line shows the additive effect size. By convention the positive values
+  signify the D alleles are associated with higher expression of App in this
+  region of Chr 7 than the B alleles. The maximum effect size is about +0.20
+  log2 expression units per D allele. The differences been the BB and DD
+  genotypes (BB and DD because each strain has two alleles; one per chromosome)
+  is therefore about 2^0.4 = 1.32 or a 32% increment in DD relative to BB at
+  this locus.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>5. If you scroll just
+  under the Physical Map you will see text that reads �DISPLAY from XXX Mb TO
+  YYY Mb�..�<span style="mso-spacerun: yes">&nbsp; </span>These physical maps
+  are zoomable, a feature we will exploit to evaluate candidate genes in this
+  QTL interval.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0008.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0008.htm
new file mode 100755
index 00000000..8a9290b6
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0008.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
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+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.png" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'><img
+border=0 src="slide0008_image076.png" style='position:absolute;top:34.09%;
+left:1.72%;width:97.48%;height:61.48%'>
+<div style='position:absolute;top:-1.06%;left:.79%;width:93.64%;height:8.65%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='mso-line-spacing:"-358 0 -1";position:absolute;top:18.36%;
+left:1.41%;width:97.31%;height:75.51%'><span style='font-family:Verdana;
+font-size:64%'>Evaluating candidate genes</span><span style='font-family:Verdana;
+font-size:73%;mso-special-format:lastCR;display:none'><i><br>
+</i></span></div>
+</div>
+<img border=0 src="slide0008_image077.png" style='position:absolute;top:8.83%;
+left:1.72%;width:34.83%;height:22.61%'>
+<div style='position:absolute;top:3.35%;left:69.53%;width:33.9%;height:17.84%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:3.96%;left:2.73%;width:93.75%;
+height:91.08%'>
+<div style='text-align:center;position:absolute;top:0%;left:0%;width:100.0%;
+height:33.69%'><span style='font-size:200%;color:#E9EB5D'><i>Right
+position<br>
+</i></span></div>
+<div style='text-align:center;position:absolute;top:32.6%;left:0%;width:100.0%;
+height:67.39%'><span style='position:absolute;top:0%;left:.41%;width:100.0%'><span
+style='font-size:200%;color:#E9EB5D'><i>and high </i></span></span><span
+style='position:absolute;top:50.0%;left:0%;width:100.0%'><span
+style='font-size:200%;color:#E9EB5D'><i>correlation</i></span></span></div>
+</div>
+</div>
+<div style='position:absolute;top:17.84%;left:75.89%;width:21.72%;height:14.31%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:3.7%;left:0%;width:100.0%;height:
+88.88%'>
+<div style='text-align:center;position:absolute;top:0%;left:6.7%;width:86.58%;
+height:58.33%'><span style='font-size:267%;color:#E9EB5D'><i><span
+style="mso-spacerun: yes">&nbsp;</span></i></span><span style='font-size:200%;
+color:#E9EB5D'><i>= better<br>
+</i></span></div>
+<div style='text-align:center;position:absolute;top:56.94%;left:0%;width:100.0%;
+height:43.05%'><span style='font-size:200%;color:#E9EB5D'><i>candidates</i></span></div>
+</div>
+</div>
+</div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face="Times New Roman" size=4><b>Evaluating
+  candidate genes (CHECKED BOXES) responsible for variability in APP
+  expression:</b></font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face="Times New Roman" size=4>A large number
+  of genes are usually in the QTL interval and are therefore POSITIONAL
+  CANDIDATES, but they will differ greatly in their biological and
+  bioinformatic plausibility. Assume that the QTL has been located between 119
+  and 131 Mb (12 Mb). There will typically be 12 to 15 genes per Mb, so we
+  might need to evaluate several hundred positional candidates. In this
+  particular case there are about 100 known genes in this interval. Eight of
+  these are highlighted in the table above with check marks in the boxes to the
+  left.<span style="mso-spacerun: yes">&nbsp; </span>We need to highlight and
+  objectively score the biologically relevant subset of all 100 positional
+  candidate genes. We could look through gene ontologies and expression levels
+  to help us shorten the list. An alternate way available using WebQTL is to
+  generate a list of those genes in this interval that have transcripts that
+  co-vary in expression with App expression. That is what the table shows.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face="Times New Roman" size=4>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face="Times New Roman" size=4>1. To replicate
+  this table go back to the Trait Data and Analysis Form. Choose to sort
+  correlations by POSITION and select RETURN = 500. Then scroll down the list
+  to Chr 7 and review the subset of positional candidates that share expression
+  with App. You should see a list similar to that shown above. Gtf3c1 is a good
+  biological candidate and has a high covariation in expression with App.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face="Times New Roman" size=4>2. Caveat:<span
+  style="mso-spacerun: yes">&nbsp;&nbsp; </span>Of course, the gene or genes
+  that control App expression may not be in this list. A protein coding
+  difference might be the ultimate cause of variation in App transcript level
+  and the expression covariation might be close to zero. Our list may also
+  simply be missing the right transcript since the microarray is not truly
+  comprehensive. Furthermore, even if the list contains the QTL gene, an
+  expression difference may only have been expressed early in development or
+  even in another tissue such as liver. While it is important to recognize
+  these caveats, it is equally important to devise a rational way to rank
+  candidates given existing data. Coexpression is one of several criteria used
+  to evaluate positional candidates. We will see others in the next slide.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face="Times New Roman" size=4>3. We can also
+  assess the likelihood that candidates contain functional polymorphism in
+  promoters and enhancers that affect their expression simply by mapping the
+  transcripts of all candidate genes to see if they �map back� to the location
+  of gene itself. A transcript that maps to its own location is referred to as
+  a cis QTL. We essentially ask: Which of the transcripts listed in the
+  Correlation Table above (from Gtf3c1 to Zranb1) has variation in expression
+  that maps to Chr 7 at about 120 Mb?<span style="mso-spacerun: yes">&nbsp;
+  </span>The logic of this search is that if a gene controls the level of its
+  own expression it is also much more likely to generate other downstream
+  effects. The Gtf3c1 transcript is a weak cis QTL with a local LRS maximum of
+  about 7.0 (D alleles are high). That is just about sufficient to declare it
+  to be a cis QTL. [No whole genome correction is required and a point-wise
+  p-value of 0.05 is the appropriate test. A p-value of 0.05 is roughly
+  equivalent to an LRS of 6.0 (LOD = 1.3).]</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0008_image018.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0008_image018.png
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new file mode 100755
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new file mode 100755
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diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0008_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0008_notes_pane.htm
new file mode 100755
index 00000000..9f5e373a
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0008_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face="Times New Roman" size=4><b>Evaluating
+  candidate genes (CHECKED BOXES) responsible for variability in APP
+  expression:</b></font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face="Times New Roman" size=4>A large number
+  of genes are usually in the QTL interval and are therefore POSITIONAL
+  CANDIDATES, but they will differ greatly in their biological and
+  bioinformatic plausibility. Assume that the QTL has been located between 119
+  and 131 Mb (12 Mb). There will typically be 12 to 15 genes per Mb, so we
+  might need to evaluate several hundred positional candidates. In this
+  particular case there are about 100 known genes in this interval. Eight of
+  these are highlighted in the table above with check marks in the boxes to the
+  left.<span style="mso-spacerun: yes">&nbsp; </span>We need to highlight and
+  objectively score the biologically relevant subset of all 100 positional
+  candidate genes. We could look through gene ontologies and expression levels
+  to help us shorten the list. An alternate way available using WebQTL is to
+  generate a list of those genes in this interval that have transcripts that
+  co-vary in expression with App expression. That is what the table shows.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face="Times New Roman" size=4>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face="Times New Roman" size=4>1. To replicate
+  this table go back to the Trait Data and Analysis Form. Choose to sort
+  correlations by POSITION and select RETURN = 500. Then scroll down the list
+  to Chr 7 and review the subset of positional candidates that share expression
+  with App. You should see a list similar to that shown above. Gtf3c1 is a good
+  biological candidate and has a high covariation in expression with App.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face="Times New Roman" size=4>2. Caveat:<span
+  style="mso-spacerun: yes">&nbsp;&nbsp; </span>Of course, the gene or genes
+  that control App expression may not be in this list. A protein coding
+  difference might be the ultimate cause of variation in App transcript level
+  and the expression covariation might be close to zero. Our list may also
+  simply be missing the right transcript since the microarray is not truly
+  comprehensive. Furthermore, even if the list contains the QTL gene, an
+  expression difference may only have been expressed early in development or
+  even in another tissue such as liver. While it is important to recognize
+  these caveats, it is equally important to devise a rational way to rank
+  candidates given existing data. Coexpression is one of several criteria used
+  to evaluate positional candidates. We will see others in the next slide.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face="Times New Roman" size=4>3. We can also
+  assess the likelihood that candidates contain functional polymorphism in
+  promoters and enhancers that affect their expression simply by mapping the
+  transcripts of all candidate genes to see if they �map back� to the location
+  of gene itself. A transcript that maps to its own location is referred to as
+  a cis QTL. We essentially ask: Which of the transcripts listed in the
+  Correlation Table above (from Gtf3c1 to Zranb1) has variation in expression
+  that maps to Chr 7 at about 120 Mb?<span style="mso-spacerun: yes">&nbsp;
+  </span>The logic of this search is that if a gene controls the level of its
+  own expression it is also much more likely to generate other downstream
+  effects. The Gtf3c1 transcript is a weak cis QTL with a local LRS maximum of
+  about 7.0 (D alleles are high). That is just about sufficient to declare it
+  to be a cis QTL. [No whole genome correction is required and a point-wise
+  p-value of 0.05 is the appropriate test. A p-value of 0.05 is roughly
+  equivalent to an LRS of 6.0 (LOD = 1.3).]</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0009.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0009.htm
new file mode 100755
index 00000000..16351b5b
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0009.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content="Aug-15-05: Physical maps are zoomable">
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0009.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.png" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:-.53%;left:1.72%;width:101.05%;height:8.65%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='mso-line-spacing:"-358 0 -1";mso-margin-left-alt:233;
+mso-text-indent-alt:0;position:absolute;top:18.36%;left:.91%;width:97.9%;
+height:75.51%'><span style='font-family:Verdana;font-size:64%'>Physical maps
+are zoomable</span><span style='font-family:Verdana;font-size:73%;mso-special-format:
+lastCR;display:none'><i><br>
+</i></span></div>
+</div>
+<img border=0 src="slide0009_image078.png" style='position:absolute;top:8.83%;
+left:3.31%;width:89.93%;height:41.69%'><img border=0
+src="slide0009_image079.png" style='position:absolute;top:44.52%;left:7.54%;
+width:42.91%;height:48.76%'><img border=0 src="slide0009_image080.png"
+style='position:absolute;top:94.52%;left:0%;width:97.08%;height:3.71%'></div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>An even higher blow-up of
+  part of the Chr 7 physical map of variation in App expression in brain.<span
+  style="mso-spacerun: yes">&nbsp; </span>The QTL region actually extends from
+  about 119 to 129.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face="Times New Roman" size=4>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face="Times New Roman" size=4>1. As mentioned
+  in the previous slide another important approach to ranking candidates is
+  based on the number of sequence variants that distinguish the parental
+  strains. If we were sure that the sequences of the gene, its promoter, and
+  its enhancers were identical between the strains then we could discount--but
+  not eliminate--that gene as a candidate. The Gtf3c1 candidate almost falls
+  into this category: of 663 known SNPs in and around this gene, only four
+  differ between C57BL/6J and DBA/2J. Gtf3c1 is essentially
+  identical-by-descent in these strains and is a less likely candidate. In
+  contrast, if the two alleles of the gene have dozens of functional variants
+  in exons, promoters, enhancers, and splice sites, then it becomes a higher
+  priority candidate.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face="Times New Roman" size=4>Of course it
+  only takes a single critical sequence variant to generate downstream effects.
+  The argument above is really about the prior probabilities. Where would you
+  place your bets given the information at hand?</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>2.<span
+  style="mso-spacerun: yes">&nbsp; </span>If you scroll down the INTERVAL
+  ANALYST you will find that Ctbp2 is a particularly interesting candidate that
+  contains lots of SNPs (n = 75 and a SNP density of 0.55 SNP/Kb). Ctbp2 is
+  also closer to our QTL peak than was Gtf3c1. Not only does Ctbp2 contain lots
+  of SNPs but it is also is associated with a powerful cis QTL with an LRS of
+  24.2 (divide by 4.61 to get the equivalent LOD score of 5.25).</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>3.<span
+  style="mso-spacerun: yes">&nbsp; </span>At this high magnification,
+  individual genes are distinct. They are color coded by their density of SNPs.
+  Bright orange represents those genes that have a high SNP density (C57BL/6J
+  versus DBA/2J), black represents genes with low SNP density. Roll the cursor
+  over a gene block and its name will pop up, along with information on exon
+  number.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>4.<span
+  style="mso-spacerun: yes">&nbsp; </span>Beneath the physical map you will
+  find an INTERVAL ANALYST table that lists information on known genes in the
+  region on which you have zoomed the Physical Map.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>5.<span
+  style="mso-spacerun: yes">&nbsp; </span>As always: error-checking is
+  important. Some genes may be missing from the Interval Analyst (recent
+  additions or errors of omission). In this case the Zranb1 gene that is
+  located just proximal to Ctbp2 is not listed in the INTERVAL ANALYST.
+  Double-check the interval using the Genome Browser links (blue and beige
+  horizontal bars) at the top of the PHYSICAL MAP.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0009_image022.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0009_image022.png
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diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0009_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0009_notes_pane.htm
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--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0009_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>An even higher blow-up of
+  part of the Chr 7 physical map of variation in App expression in brain.<span
+  style="mso-spacerun: yes">&nbsp; </span>The QTL region actually extends from
+  about 119 to 129.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face="Times New Roman" size=4>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face="Times New Roman" size=4>1. As mentioned
+  in the previous slide another important approach to ranking candidates is
+  based on the number of sequence variants that distinguish the parental
+  strains. If we were sure that the sequences of the gene, its promoter, and
+  its enhancers were identical between the strains then we could discount--but
+  not eliminate--that gene as a candidate. The Gtf3c1 candidate almost falls
+  into this category: of 663 known SNPs in and around this gene, only four
+  differ between C57BL/6J and DBA/2J. Gtf3c1 is essentially
+  identical-by-descent in these strains and is a less likely candidate. In
+  contrast, if the two alleles of the gene have dozens of functional variants
+  in exons, promoters, enhancers, and splice sites, then it becomes a higher
+  priority candidate.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face="Times New Roman" size=4>Of course it
+  only takes a single critical sequence variant to generate downstream effects.
+  The argument above is really about the prior probabilities. Where would you
+  place your bets given the information at hand?</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>2.<span
+  style="mso-spacerun: yes">&nbsp; </span>If you scroll down the INTERVAL
+  ANALYST you will find that Ctbp2 is a particularly interesting candidate that
+  contains lots of SNPs (n = 75 and a SNP density of 0.55 SNP/Kb). Ctbp2 is
+  also closer to our QTL peak than was Gtf3c1. Not only does Ctbp2 contain lots
+  of SNPs but it is also is associated with a powerful cis QTL with an LRS of
+  24.2 (divide by 4.61 to get the equivalent LOD score of 5.25).</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>3.<span
+  style="mso-spacerun: yes">&nbsp; </span>At this high magnification,
+  individual genes are distinct. They are color coded by their density of SNPs.
+  Bright orange represents those genes that have a high SNP density (C57BL/6J
+  versus DBA/2J), black represents genes with low SNP density. Roll the cursor
+  over a gene block and its name will pop up, along with information on exon
+  number.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>4.<span
+  style="mso-spacerun: yes">&nbsp; </span>Beneath the physical map you will
+  find an INTERVAL ANALYST table that lists information on known genes in the
+  region on which you have zoomed the Physical Map.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>5.<span
+  style="mso-spacerun: yes">&nbsp; </span>As always: error-checking is
+  important. Some genes may be missing from the Interval Analyst (recent
+  additions or errors of omission). In this case the Zranb1 gene that is
+  located just proximal to Ctbp2 is not listed in the INTERVAL ANALYST.
+  Double-check the interval using the Genome Browser links (blue and beige
+  horizontal bars) at the top of the PHYSICAL MAP.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0010.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0010.htm
new file mode 100755
index 00000000..91cf9f00
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0010.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Aug-15-05: Evaluating Ctbp2 as a candidate QTL for App">
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0010.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.png" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:0%;left:1.72%;width:106.35%;height:7.24%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='mso-line-spacing:"-358 0 -1";mso-margin-left-alt:233;
+mso-text-indent-alt:0;position:absolute;top:12.19%;left:.87%;width:99.12%;
+height:90.24%'><span style='font-family:Verdana;font-size:64%'>Evaluating </span><span
+style='font-family:Verdana;font-size:64%'><i>Ctbp2</i></span><span
+style='font-family:Verdana;font-size:64%'> as a candidate QTL for </span><span
+style='font-family:Verdana;font-size:64%'><i>App</i></span><span
+style='font-family:Verdana;font-size:73%;mso-special-format:lastCR;display:
+none'><i><br>
+</i></span></div>
+</div>
+<img border=0 src="slide0010_image082.png" style='position:absolute;top:94.52%;
+left:3.31%;width:96.68%;height:4.24%'><img border=0 src="slide0010_image083.png"
+style='position:absolute;top:7.77%;left:3.31%;width:48.34%;height:40.28%'>
+<div class=O style='position:absolute;top:52.82%;left:55.23%;width:35.76%;
+height:37.98%'><span style='position:absolute;top:0%;left:0%;width:94.81%'><span
+style='font-size:233%;color:#E9EB5D'>This is</span><span style='font-size:233%;
+color:#E9EB5D'><i> the </i></span></span><span style='position:absolute;
+top:16.74%;left:0%;width:95.92%'><span style='font-size:233%;color:#E9EB5D'><i>Ctbp2
+</i></span><span style='font-size:233%;color:#E9EB5D'>cis QTL, </span></span><span
+style='position:absolute;top:33.48%;left:0%;width:98.14%'><span
+style='font-size:233%;color:#E9EB5D'>but is detected </span></span><span
+style='position:absolute;top:49.76%;left:0%;width:94.81%'><span
+style='font-size:233%;color:#E9EB5D'>only in the </span></span><span
+style='position:absolute;top:66.51%;left:0%;width:100.0%'><span
+style='font-size:233%;color:#E9EB5D'>Rosen striatum </span></span><span
+style='position:absolute;top:83.25%;left:0%;width:94.81%'><span
+style='font-size:233%;color:#E9EB5D'>data set.</span><span style='font-size:
+233%;color:#E9EB5D;mso-special-format:lastCR;display:none'><i><br>
+</i></span></span></div>
+<div class=O style='position:absolute;top:16.25%;left:56.02%;width:48.21%;
+height:12.72%'><span style='position:absolute;top:0%;left:0%;width:94.78%'><span
+style='font-size:233%;color:#E9EB5D'>This is</span><span style='font-size:233%;
+color:#E9EB5D'><i> the App QTL </i></span></span><span style='position:absolute;
+top:48.61%;left:0%;width:100.0%'><span style='font-size:233%;color:#E9EB5D'>in
+the INIA data set. </span><span style='font-size:233%;color:#E9EB5D;mso-special-format:
+lastCR;display:none'><i><br>
+</i></span></span></div>
+<img border=0 src="slide0010_image084.png" style='position:absolute;top:39.39%;
+left:3.31%;width:48.47%;height:53.35%'><img border=0
+src="slide0010_image085.png" style='position:absolute;top:10.95%;left:35.36%;
+width:.39%;height:72.79%'><img border=0 src="slide0010_image086.png"
+style='position:absolute;top:10.95%;left:31.52%;width:.39%;height:72.79%'></div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>This slide illustrates one
+  reason why Ctbp2 should be considered a high priority positional candidate
+  gene that may modulate the expression level of App.<span style="mso-spacerun:
+  yes">&nbsp; </span>Ctbp2 is a strong cis QTL in some brain regions (here the
+  data are taken from the striatum).<span style="mso-spacerun: yes">&nbsp;
+  </span>If Ctbp2 contains variants that modulate its own expression then these
+  expression differences may produce many downstream effects. Of course, we now
+  want to know much more about the known biology of Ctbp2. What kind of gene is
+  it? To begin to answer that question we can use a number of resources listed
+  in the LINKS page.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Arial size=3>1.</font><font face=Verdana
+  size=3> The App QTL is bimodal. Perhaps there are actually two causal factors
+  in this region--one close to 123 Mb and the other close to 127 Mb.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>2. The precision of QTL
+  mapping depends on several factors, including the effect size and
+  interactions among QTLs modulating a trait, the number of genetic individuals
+  that are studied, and the distribution of recombinations in the study
+  population.<span style="mso-spacerun: yes">&nbsp; </span>In the case above,
+  the QTL(s) are likely to be confined to the interval from 120 to 132 Mb. The
+  bootstrap test (yellow bars shown in some of the previous slides) can be
+  usual for estimating the consistency of QTL peaks.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0010_image023.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0010_image023.png
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diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0010_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0010_notes_pane.htm
new file mode 100755
index 00000000..bdb257fb
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0010_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>This slide illustrates one
+  reason why Ctbp2 should be considered a high priority positional candidate
+  gene that may modulate the expression level of App.<span style="mso-spacerun:
+  yes">&nbsp; </span>Ctbp2 is a strong cis QTL in some brain regions (here the
+  data are taken from the striatum).<span style="mso-spacerun: yes">&nbsp;
+  </span>If Ctbp2 contains variants that modulate its own expression then these
+  expression differences may produce many downstream effects. Of course, we now
+  want to know much more about the known biology of Ctbp2. What kind of gene is
+  it? To begin to answer that question we can use a number of resources listed
+  in the LINKS page.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Arial size=2>1.</font><font face=Verdana
+  size=2> The App QTL is bimodal. Perhaps there are actually two causal factors
+  in this region--one close to 123 Mb and the other close to 127 Mb.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>2. The precision of QTL
+  mapping depends on several factors, including the effect size and
+  interactions among QTLs modulating a trait, the number of genetic individuals
+  that are studied, and the distribution of recombinations in the study
+  population.<span style="mso-spacerun: yes">&nbsp; </span>In the case above,
+  the QTL(s) are likely to be confined to the interval from 120 to 132 Mb. The
+  bootstrap test (yellow bars shown in some of the previous slides) can be
+  usual for estimating the consistency of QTL peaks.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0011.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0011.htm
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+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Aug-15-05: Evaluating Ctbp2 using other resources">
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
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+	width:6.0in !important;
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+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
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+LoadSld( gId );
+playList();MakeSldVis(1);
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+visibility:hidden'><img src="master03_background.png" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:0%;left:1.72%;width:101.05%;height:8.65%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='mso-line-spacing:"-358 0 -1";mso-margin-left-alt:233;
+mso-text-indent-alt:0;position:absolute;top:18.36%;left:.91%;width:97.9%;
+height:75.51%'><span style='font-family:Verdana;font-size:64%'>Evaluating </span><span
+style='font-family:Verdana;font-size:64%'><i>Ctbp2</i></span><span
+style='font-family:Verdana;font-size:64%'> using other resources</span><span
+style='font-family:Verdana;font-size:73%;mso-special-format:lastCR;display:
+none'><i><br>
+</i></span></div>
+</div>
+<img border=0 src="slide0011_image087.png" style='position:absolute;top:10.07%;
+left:1.72%;width:48.21%;height:53.35%'><img border=0
+src="slide0011_image088.png" style='position:absolute;top:40.81%;left:19.2%;
+width:78.54%;height:54.77%'></div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>Ctbp2 should also be
+  considered a high priority biological candidate gene responsible for
+  modulating App expression levels. The C-terminal binding protein 2 is a
+  transcriptional co-repressor also known as Ribeye.</font><font
+  face=Times-Roman size=3> The gene produces two transcripts encoding distinct
+  proteins. The short form is a transcriptional repressor that binds a
+  Pro-X-Asp-Leu-Ser peptide motif and interacts with several transcription
+  factors including EVI1, ZFPM1, and ZFHX1A (aka TCF8, deltaEF1). The longer
+  isoform is a major component of specialized synapses in photoreceptors. Both
+  proteins contain a NAD+ binding domain similar to NAD+-dependent
+  2-hydroxyacid dehydrogenases.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>1. To find out more about
+  CTBP2 protein and the Ctbp2 gene, link to iHOP at
+  http://www.pdg.cnb.uam.es/UniPub/iHOP/ and type in CTBP2</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>Try Arrowsmith at
+  http://arrowsmith.psych.uic.edu/cgi-test/arrowsmith_uic/pubsmith.cgi</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>2. Both APP and CTBP2 are
+  involved in oxidoreducatase activity or Notch signaling. To establish this
+  common gene ontology visit NCBI<span style="mso-spacerun: yes">&nbsp;
+  </span>http://www.ncbi.nih.gov/entrez/query.fcgi?db=gene and enter each gene
+  symbol.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>3. You can get interesting
+  hints regarding Ctbp2 expression partners by examining the genetic
+  correlations between Ctbp2 probe set 1422887_a_at and all other transcripts
+  on the M430 Affymetrix array. Use the Striatum data set because we already
+  know from previous work (the previous slide) that this gene is a cis
+  QTL.<span style="mso-spacerun: yes">&nbsp; </span>You should be able to show
+  that Ctbp2 and Notch3 have antagonistic expression patterns in striatum. The
+  negative genetic correlation with E2f4 is even stronger. The transcript also
+  has a high positive genetic correlation with Rdh14. Of particular interest
+  with respect to APP protein processing, Ctbp2 covaries positively with Bace2
+  (the transcript of the beta site APP-cleaving enzyme 2).</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0011_image025.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0011_image025.png
new file mode 100755
index 00000000..d29a333f
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0011_image025.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0011_image087.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0011_image087.png
new file mode 100755
index 00000000..a6ca39ae
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0011_image087.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0011_image088.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0011_image088.png
new file mode 100755
index 00000000..c17a41bc
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0011_image088.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0011_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0011_notes_pane.htm
new file mode 100755
index 00000000..c287e06e
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0011_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Ctbp2 should also be
+  considered a high priority biological candidate gene responsible for
+  modulating App expression levels. The C-terminal binding protein 2 is a
+  transcriptional co-repressor also known as Ribeye.</font><font
+  face=Times-Roman size=2> The gene produces two transcripts encoding distinct
+  proteins. The short form is a transcriptional repressor that binds a
+  Pro-X-Asp-Leu-Ser peptide motif and interacts with several transcription
+  factors including EVI1, ZFPM1, and ZFHX1A (aka TCF8, deltaEF1). The longer
+  isoform is a major component of specialized synapses in photoreceptors. Both
+  proteins contain a NAD+ binding domain similar to NAD+-dependent
+  2-hydroxyacid dehydrogenases.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>1. To find out more about
+  CTBP2 protein and the Ctbp2 gene, link to iHOP at
+  http://www.pdg.cnb.uam.es/UniPub/iHOP/ and type in CTBP2</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Try Arrowsmith at
+  http://arrowsmith.psych.uic.edu/cgi-test/arrowsmith_uic/pubsmith.cgi</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>2. Both APP and CTBP2 are
+  involved in oxidoreducatase activity or Notch signaling. To establish this
+  common gene ontology visit NCBI<span style="mso-spacerun: yes">&nbsp;
+  </span>http://www.ncbi.nih.gov/entrez/query.fcgi?db=gene and enter each gene
+  symbol.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>3. You can get interesting
+  hints regarding Ctbp2 expression partners by examining the genetic
+  correlations between Ctbp2 probe set 1422887_a_at and all other transcripts
+  on the M430 Affymetrix array. Use the Striatum data set because we already
+  know from previous work (the previous slide) that this gene is a cis
+  QTL.<span style="mso-spacerun: yes">&nbsp; </span>You should be able to show
+  that Ctbp2 and Notch3 have antagonistic expression patterns in striatum. The
+  negative genetic correlation with E2f4 is even stronger. The transcript also
+  has a high positive genetic correlation with Rdh14. Of particular interest
+  with respect to APP protein processing, Ctbp2 covaries positively with Bace2
+  (the transcript of the beta site APP-cleaving enzyme 2).</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0012.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0012.htm
new file mode 100755
index 00000000..852e722e
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0012.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0012.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.png" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:-.35%;left:3.31%;width:93.64%;height:14.48%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=B style='mso-line-spacing:"-220 0 -216";mso-margin-left-alt:292;
+mso-text-indent-alt:0;position:absolute;top:0%;left:1.13%;width:97.59%;
+height:51.21%'><span style='mso-special-format:nobullet;display:none;
+color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>Summary of Part 2</span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</div>
+<div style='position:absolute;top:15.01%;left:5.96%;width:101.19%;height:31.09%'>
+<div class=O1 style='mso-margin-left-alt:432'></div>
+<div class=O2 style='mso-margin-left-alt:720'></div>
+<div class=O3 style='mso-margin-left-alt:1008'></div>
+<div class=O4 style='mso-margin-left-alt:1296'></div>
+<div class=O style='mso-margin-left-alt:144;position:absolute;top:0%;
+left:0%;width:86.25%;height:14.2%'><span style='position:absolute;top:0%;
+left:2.88%;width:97.11%'><span style='font-family:"Gill Sans";font-size:167%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:"numbullet3\,1";
+position:absolute;left:-2.96%;font-family:Arial'>1.</span></span><span
+style='font-family:"Gill Sans";font-size:167%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>Covered the basics of QTL
+analysis and mapping.<br>
+</span></span></div>
+<div class=O style='mso-margin-left-alt:144;position:absolute;top:14.2%;
+left:0%;width:86.25%;height:14.2%'><span style='position:absolute;top:0%;
+left:2.88%;width:97.11%'><span style='font-family:"Gill Sans";font-size:167%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:"numbullet3\,1";
+position:absolute;left:-2.96%;font-family:Arial'>2.</span></span><span
+style='font-family:"Gill Sans";font-size:167%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>Reviewed difference between
+genetic and physical maps.<br>
+</span></span></div>
+<div class=O style='mso-margin-left-alt:144;position:absolute;top:28.4%;
+left:0%;width:100.0%;height:42.61%'><span style='position:absolute;top:0%;
+left:2.48%;width:97.51%'><span style='font-family:"Gill Sans";font-size:167%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:"numbullet3\,1";
+position:absolute;left:-2.55%;font-family:Arial'>3.</span></span><span
+style='font-family:"Gill Sans";font-size:167%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>Discussed interpreting features
+of QTL maps including the LRS function, </span></span><span style='position:
+absolute;top:33.33%;left:2.48%;width:91.23%'><span style='font-family:"Gill Sans";
+font-size:167%;color:#E9EB5D;mso-color-index:3'>the additive effect function,
+the bootstrap bars, and the permutation </span></span><span style='position:
+absolute;top:68.0%;left:2.48%;width:83.76%'><span style='font-family:"Gill Sans";
+font-size:167%;color:#E9EB5D;mso-color-index:3'>thresholds.<br>
+</span></span></div>
+<div class=O style='mso-margin-left-alt:144;position:absolute;top:71.59%;
+left:0%;width:88.35%;height:14.2%'><span style='position:absolute;top:0%;
+left:2.81%;width:97.18%'><span style='font-family:"Gill Sans";font-size:167%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:"numbullet3\,1";
+position:absolute;left:-2.89%;font-family:Arial'>4.</span></span><span
+style='font-family:"Gill Sans";font-size:167%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>Illustrated techniques to
+generate a list of positional candidates.<br>
+</span></span></div>
+<div class=O style='mso-margin-left-alt:144;position:absolute;top:85.79%;
+left:0%;width:86.25%;height:14.2%'><span style='position:absolute;top:0%;
+left:2.88%;width:97.11%'><span style='font-family:"Gill Sans";font-size:167%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:"numbullet3\,1";
+position:absolute;left:-2.96%;font-family:Arial'>5.</span></span><span
+style='font-family:"Gill Sans";font-size:167%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>Discussed some factors used to
+evaluate candidate genes.</span></span></div>
+</div>
+<div class=O style='position:absolute;top:58.65%;left:5.96%;width:106.22%;
+height:22.26%'><span style='position:absolute;top:0%;left:0%;width:84.53%'><span
+style='font-family:"Gill Sans";font-size:167%;color:#E9EB5D;mso-color-index:
+3'>What does a QTL signify? A good QTL is a claim that a particular </span></span><span
+style='position:absolute;top:19.84%;left:0%;width:96.38%'><span
+style='font-family:"Gill Sans";font-size:167%;color:#E9EB5D;mso-color-index:
+3'>chromosomal region contains a causal source of variation in the phenotype. </span></span><span
+style='position:absolute;top:39.68%;left:0%;width:100.0%'><span
+style='font-family:"Gill Sans";font-size:167%;color:#E9EB5D;mso-color-index:
+3'>The importance of this hypothesis depends on the quality and relevance of
+the </span></span><span style='position:absolute;top:59.52%;left:0%;width:90.89%'><span
+style='font-family:"Gill Sans";font-size:167%;color:#E9EB5D;mso-color-index:
+3'>phenotype and the statistical strength of the QTL. As usual, test and be </span></span><span
+style='position:absolute;top:79.36%;left:0%;width:84.53%'><span
+style='font-family:"Gill Sans";font-size:167%;color:#E9EB5D;mso-color-index:
+3'>skeptical.</span></span></div>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0012_image026.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0012_image026.png
new file mode 100755
index 00000000..a0675ffc
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0012_image026.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0012_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0012_notes_pane.htm
new file mode 100755
index 00000000..895ab29b
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0012_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>By clicking on the
+  CORRELATION of the Atcay transcript to the App transcript, you can generate a
+  Correlation plot between these two transcripts. In this App and Atcay
+  scatterplot, each point is a strain mean value. For example, BXD33 and BXD8
+  have low App and Atcay expressions. The two parental strains and the F1 are
+  also included in this plot.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0013.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0013.htm
new file mode 100755
index 00000000..f8993810
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0013.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content="Aug-15-05: Test Questions">
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0013.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.png" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:0%;left:1.72%;width:101.05%;height:8.65%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='mso-line-spacing:"-358 0 -1";mso-margin-left-alt:233;
+mso-text-indent-alt:0;position:absolute;top:18.36%;left:.91%;width:97.9%;
+height:75.51%'><span style='font-family:Verdana;font-size:64%'>Test Questions</span><span
+style='font-family:Verdana;font-size:73%;mso-special-format:lastCR;display:
+none'><i><br>
+</i></span></div>
+</div>
+<div class=O style='position:absolute;top:11.83%;left:4.37%;width:108.34%;
+height:6.53%'><span style='font-size:233%;color:#E9EB5D'>1. Evaluate candidates
+for the Chr 3 </span><span style='font-size:233%;color:#E9EB5D'><i>App</i></span><span
+style='font-size:233%;color:#E9EB5D'> QTL.</span><span style='font-size:233%;
+color:#E9EB5D;mso-special-format:lastCR;display:none'><i><br>
+</i></span></div>
+<div class=O style='position:absolute;top:24.02%;left:4.9%;width:100.92%;
+height:12.72%'><span style='position:absolute;top:0%;left:0%;width:100.0%'><span
+style='font-size:233%;color:#E9EB5D'>2. Do </span><span style='font-size:233%;
+color:#E9EB5D'><i>App</i></span><span style='font-size:233%;color:#E9EB5D'> and
+</span><span style='font-size:233%;color:#E9EB5D'><i>Ctbp2</i></span><span
+style='font-size:233%;color:#E9EB5D'> expression share any </span></span><span
+style='position:absolute;top:50.0%;left:0%;width:93.43%'><span
+style='font-size:233%;color:#E9EB5D'>other QTLs beside that on Chr 7?</span><span
+style='font-size:233%;color:#E9EB5D;mso-special-format:lastCR;display:none'><i><br>
+</i></span></span></div>
+<div class=O style='position:absolute;top:43.99%;left:4.9%;width:102.91%;
+height:19.08%'><span style='position:absolute;top:0%;left:0%;width:100.0%'><span
+style='font-size:233%;color:#E9EB5D'>3. Can you exploit literature mining tools
+to </span></span><span style='position:absolute;top:33.33%;left:0%;width:98.45%'><span
+style='font-size:233%;color:#E9EB5D'>find a strong relationship between </span><span
+style='font-size:233%;color:#E9EB5D'><i>App</i></span><span style='font-size:
+233%;color:#E9EB5D'> and </span></span><span style='position:absolute;
+top:65.74%;left:0%;width:91.63%'><span style='font-size:233%;color:#E9EB5D'><i>Ctbp2</i></span><span
+style='font-size:233%;color:#E9EB5D'>? </span><span style='font-size:233%;
+color:#E9EB5D;mso-special-format:lastCR;display:none'><i><br>
+</i></span></span></div>
+<div class=O style='position:absolute;top:69.08%;left:4.9%;width:110.19%;
+height:12.72%'><span style='position:absolute;top:0%;left:0%;width:100.0%'><span
+style='font-size:233%;color:#E9EB5D'>4. Why might the cis QTL for </span><span
+style='font-size:233%;color:#E9EB5D'><i>Ctbp2</i></span><span style='font-size:
+233%;color:#E9EB5D'> expression </span></span><span style='position:absolute;
+top:50.0%;left:0%;width:89.66%'><span style='font-size:233%;color:#E9EB5D'>only
+be detected in the striatum data set?</span><span style='font-size:233%;
+color:#E9EB5D;mso-special-format:lastCR;display:none'><i><br>
+</i></span></span></div>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0013_image027.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0013_image027.png
new file mode 100755
index 00000000..ba473846
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0013_image027.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0013_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0013_notes_pane.htm
new file mode 100755
index 00000000..190b8653
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0013_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>A group of traits from
+  many different databases can be selected and brought together for joint
+  analysis. In this case all of the content of the BXD SELECTIONS is from a
+  single BRAIN database, the top 20 neighbors of the App transcript from the
+  Correlation Results table. Eight of these neighbors plus App is shown in the
+  slide.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Arial size=2>1.</font><font
+  face=Helvetica size=2>All of items in the BXD SELECTIONS were selected using
+  the SELECT ALL button</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>2. The buttons at the
+  top (and bottom) of this page can do some cool stuff. We will work with
+  NETWORK GRAPH first.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>3. Think of the
+  SELECTIONS as your shopping cart. You go to different aisles in the
+  supermarket to acquire different types of items of interest. These could
+  include transcripts, classical phenotypes (longevity, brain weight, prepulse
+  inhibition, iron levels in midbrain). �Checking out� in this case involves
+  doing some analysis with the items in the cart.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>4. Different tools
+  handle different numbers of items. Most will handle up to 100 traits.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0014.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0014.htm
new file mode 100755
index 00000000..e5de4030
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0014.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Aug-15-05: Contact for comments and improvements:">
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0014.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.png" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:2.29%;left:2.51%;width:94.43%;height:9.89%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='mso-line-spacing:"-358 0 -1";position:absolute;top:19.64%;
+left:1.4%;width:97.47%;height:69.64%'><span style='font-size:73%'><i>Contact
+for comments and improvements:</i></span><span style='font-size:82%;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</div>
+<div style='position:absolute;top:16.6%;left:6.62%;width:90.19%;height:24.38%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='mso-line-spacing:"-358 0 -1";position:absolute;top:0%;
+left:1.46%;width:97.35%;height:100.0%'><span style='position:absolute;
+top:0%;left:0%;width:100.0%'><span style='font-size:82%'>rwilliam@nb.utmem.edu<br>
+</span></span><span
+style='position:absolute;top:34.05%;left:4.67%;width:95.47%'><span
+style='font-size:82%'><br>
+</span></span><span style='position:absolute;
+top:68.11%;left:4.67%;width:95.47%'><span style='font-size:82%;mso-special-format:
+lastCR;display:none'><br>
+</span></span></div>
+</div>
+<div class=O style='position:absolute;top:27.56%;left:9.4%;width:50.59%;
+height:7.77%'><span style='font-family:"Gill Sans";font-size:300%;color:#E9EB5D'>kmanly@utmem.edu</span></div>
+<div class=O style='position:absolute;top:83.56%;left:4.37%;width:108.34%;
+height:15.9%'><span style='position:absolute;top:0%;left:0%;width:90.83%'><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D'>The </span><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D'><i>App</i></span><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D'> findings reviewed
+in this presentation are part of an </span></span><span style='position:absolute;
+top:33.33%;left:0%;width:100.0%'><span style='font-family:"Gill Sans";
+font-size:200%;color:#E9EB5D'>ongoing study by R. Williams. R. Homayouni, and
+R. Clark (July 15, </span></span><span style='position:absolute;top:66.66%;
+left:0%;width:84.35%'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D'>2005)</span><span style='font-family:"Gill Sans";font-size:300%;
+color:#E9EB5D;mso-special-format:lastCR;display:none'><br>
+</span></span></div>
+</div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>END</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0014_image029.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0014_image029.png
new file mode 100755
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new file mode 100755
index 00000000..8d72b4c1
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new file mode 100755
index 00000000..c1cd1c01
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0014_image033.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0014_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0014_notes_pane.htm
new file mode 100755
index 00000000..4a9d3b57
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0014_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>END</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0015.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0015.htm
new file mode 100755
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--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0015.htm
@@ -0,0 +1,155 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Aug-15-05: The GeneNetwork and WebQTL : PART 2    link to www.genenetwork.org">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
+		min = window.innerHeight/20;
+		
+	return min+"pt";
+}
+var SoundEnabled = navigator.plugins && navigator.plugins["LiveAudio"];
+function restore() {
+	self.location.reload();
+}
+function set_size() {
+	document.SlideLayer.width = window.innerWidth;
+	document.SlideLayer.height = window.innerHeight;
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+document.captureEvents(Event.MOUSEDOWN);
+document.captureEvents(Event.KEYPRESS);
+document.onkeypress = _KPH ;
+document.onmousedown = _KPH ;
+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0015.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
+bgcolor="#000000">
+<script>
+
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+
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+g_left = (window.innerWidth - g_width) / 2;
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+document.write( '<layer id=SlideLayer BGCOLOR=#484848 background="" top=' + g_top + ' left=' + g_left + ' height=' + g_height + ' width=' + g_width + ' >' );
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+document.SlideLayer.clip.left = 0;
+document.SlideLayer.clip.height = g_height;
+document.SlideLayer.clip.width = g_width;
+function new_font_size() {
+	var size = 11 * g_width / g_origWidth;
+	if ( size < 1 ) size = 1;
+	return size+"pt";
+}
+</script>
+<div id=SlideObj class=sld style='position:relative;font-size:&{new_font_size()};'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 1 * g_height; mywidth = 1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.png" height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.03 * g_height; myleft = 0.02 * g_width; myheight = 0.18 * g_height; mywidth = 0.96 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.02 * g_height; myleft = 0 * g_width; myheight = 0.13 * g_height; mywidth = 0.94 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:"-277 0 -1";mso-margin-left-alt:232;
+mso-text-indent-alt:0;mso-line-spacing:"-277 0 -1";mso-margin-left-alt:232;
+mso-text-indent-alt:0'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.94 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:73%'>The GeneNetwork and WebQTL
+: PART 2<span style="mso-spacerun: yes">&nbsp;&nbsp; </span><br>
+</span></span></layer><script>
+	mytop = 0.06 * g_height; myleft = 0.04 * g_width; myheight = 0.06 * g_height; mywidth = 0.89 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:73%'>link to www.genenetwork.org</span><span
+style='font-size:73%;mso-special-format:lastCR;display:none'><i><br>
+</i></span></span></layer></div>
+</layer></div>
+</layer><script>
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+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.42 * g_height; mywidth = 0.52 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;font-size:213%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.21 * g_height; mywidth = 0.52 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-220 0 -216";mso-margin-left-alt:348;mso-text-indent-alt:
+56'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.46 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='mso-special-format:nobullet;display:none;
+color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3'>Part 1. How to study </span></span></layer><script>
+	mytop = 0.05 * g_height; myleft = 0.05 * g_width; myheight = 0.06 * g_height; mywidth = 0.41 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:94%;color:#E9EB5D;mso-color-index:
+3'>expression variation </span></span></layer><script>
+	mytop = 0.1 * g_height; myleft = 0.05 * g_width; myheight = 0.06 * g_height; mywidth = 0.47 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:94%;color:#E9EB5D;mso-color-index:
+3'>and genetic correlation </span></span></layer><script>
+	mytop = 0.15 * g_height; myleft = 0.05 * g_width; myheight = 0.06 * g_height; mywidth = 0.41 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:94%;color:#E9EB5D;mso-color-index:
+3'>(slides 2&#8211;17)<br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.25 * g_height; myleft = 0 * g_width; myheight = 0.16 * g_height; mywidth = 0.48 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-220 0 -216";mso-margin-left-alt:348;mso-text-indent-alt:
+56'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.46 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='mso-special-format:nobullet;display:none;
+color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3'>Part 2. Discovering </span></span></layer><script>
+	mytop = 0.05 * g_height; myleft = 0.05 * g_width; myheight = 0.06 * g_height; mywidth = 0.43 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:94%;color:#E9EB5D;mso-color-index:
+3'>upstream modulators </span></span></layer><script>
+	mytop = 0.1 * g_height; myleft = 0.05 * g_width; myheight = 0.06 * g_height; mywidth = 0.41 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:94%;color:#E9EB5D;mso-color-index:
+3'>(slides 18&#8211;29)</span></span></layer></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.17 * g_height; myleft = 0.74 * g_width; myheight = 0.64 * g_height; mywidth = 0.23 * g_width;
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+</script>
+<div><script language=JavaScript><!--
+xx = 0.74 * g_width;
+yy = 0.17 * g_height;
+ht = 0.64 * g_height;
+wd = 0.23 * g_width;
+document.write(
+'<img border=0 src="slide0001_image001.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.75 * g_height; myleft = 0.74 * g_width; myheight = 0.14 * g_height; mywidth = 0.1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-346 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:"Arial Rounded MT Bold";font-size:233%;color:#6E6E6E'>RNA</span><span
+style='font-family:"Arial Rounded MT Bold";font-size:300%;color:#6E6E6E;
+display:none'><br>
+</span></div>
+</layer><script>
+	mytop = 0.06 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.08 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-346 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:"Arial Rounded MT Bold";font-size:300%;color:#6E6E6E;
+mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.82 * g_height; myleft = 0.04 * g_width; myheight = 0.18 * g_height; mywidth = 0.96 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div></div>
+</layer><script>
+	mytop = 0.5 * g_height; myleft = 0.48 * g_width; myheight = 0.13 * g_height; mywidth = 0.25 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.48 * g_width;
+yy = 0.5 * g_height;
+ht = 0.13 * g_height;
+wd = 0.25 * g_width;
+document.write(
+'<img border=0 src="slide0001_image002.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Part 2: Discovering
+   upstream modulators and quantitative trait loci (QTLs). A quantitative trait
+   locus is a chromosomal region that harbors one or a few polymorphic gene
+   loci that influence a trait. We are going to be looking for QTLs that
+   modulate the steady state expression level of App in the adult mouse
+   forebrain.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0015_image034.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0015_image034.png
new file mode 100755
index 00000000..dafa2898
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0015_image034.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0015_image035.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0015_image035.png
new file mode 100755
index 00000000..35566d47
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0015_image035.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0015_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0015_notes_pane.htm
new file mode 100755
index 00000000..c4c4ec6d
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0015_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Going back to the Trait
+  Data and Analysis Form window, we have computed the correlations between
+  strain variation in App expression level and other classical phenotypes that
+  have already been measured in many of the same BXD strains.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Arial size=2>1.</font><font
+  face=Helvetica size=2>The number of common strains varies widely--in this
+  case from 14 to 23 strains.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>2. We can add these
+  traits (four are selected) to our BXD SELECTIONS window.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0016.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0016.htm
new file mode 100755
index 00000000..ea69ff33
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0016.htm
@@ -0,0 +1,919 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<style media=print>
+<!--.sld
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+<script language=JavaScript>
+function font_size() {
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+}
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+}
+document.captureEvents(Event.MOUSEDOWN);
+document.captureEvents(Event.KEYPRESS);
+document.onkeypress = _KPH ;
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+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0016.htm");
+}//-->
+</script>
+</head>
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+<div><script language=JavaScript><!--
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+document.write(
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+</layer><script>
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+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
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+</script>
+<div style='mso-line-spacing:"-134 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Times;font-size:117%;color:white;display:none'><br>
+</span></div>
+</layer><script>
+	mytop = 0.03 * g_height; myleft = 0 * g_width; myheight = 0.02 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-134 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
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+</span></div>
+</layer></div>
+</layer><script>
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+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
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+<div style='text-align:center;mso-line-spacing:"-134 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Times;font-size:117%;
+color:white;display:none'><br>
+</span></div>
+</layer><script>
+	mytop = 0.03 * g_height; myleft = 0 * g_width; myheight = 0.02 * g_height; mywidth = 0.29 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-134 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Times;font-size:117%;
+color:white;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.02 * g_height; myleft = -0.05 * g_width; myheight = 0.11 * g_height; mywidth = 1.05 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.1 * g_height; mywidth = 1.05 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 1.05 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-240 0 0";mso-margin-left-alt:
+16;mso-text-indent-alt:16'><span style='font-family:Arial;font-size:267%;
+color:#E9EB5D'>How to make recombinant inbred strains (RI)</span><span
+style='font-family:Arial;font-size:150%;color:aqua;display:none'><br>
+</span></div>
+</layer><script>
+	mytop = 0.06 * g_height; myleft = 0.06 * g_width; myheight = 0.03 * g_height; mywidth = 0.92 * g_width;
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+</script>
+<div style='text-align:center;mso-line-spacing:"-160 0 0";mso-margin-left-alt:
+16;mso-text-indent-alt:16'><span style='font-family:Arial;font-size:150%;
+color:aqua;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.28 * g_height; myleft = 0.45 * g_width; myheight = 0.01 * g_height; mywidth = 0.18 * g_width;
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+</script>
+<div><script language=JavaScript><!--
+xx = 0.45 * g_width;
+yy = 0.28 * g_height;
+ht = 0.01 * g_height;
+wd = 0.18 * g_width;
+document.write(
+'<img border=0 src="slide0002_image003.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.2 * g_height; myleft = 0.28 * g_width; myheight = 0.11 * g_height; mywidth = 0.01 * g_width;
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+</script>
+<div><script language=JavaScript><!--
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+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:150%;color:#FFFF99'>C57BL/6J
+(B)<br>
+</span></div>
+</layer><script>
+	mytop = 0.04 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.15 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:150%;color:#FFFF99;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.2 * g_height; myleft = 0.3 * g_width; myheight = 0.11 * g_height; mywidth = 0.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.3 * g_width;
+yy = 0.2 * g_height;
+ht = 0.11 * g_height;
+wd = 0.01 * g_width;
+document.write(
+'<img border=0 src="slide0002_image005.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.15 * g_height; myleft = 0.62 * g_width; myheight = 0.09 * g_height; mywidth = 0.16 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.15 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.15 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:150%;color:#FFFF99'>DBA/2J
+(D)<br>
+</span></div>
+</layer><script>
+	mytop = 0.04 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.12 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:150%;color:#FFFF99;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.2 * g_height; myleft = 0.66 * g_width; myheight = 0.11 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.66 * g_width;
+yy = 0.2 * g_height;
+ht = 0.11 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0002_image006.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.35 * g_height; myleft = 0.23 * g_width; myheight = 0.01 * g_height; mywidth = 0.5 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.23 * g_width;
+yy = 0.35 * g_height;
+ht = 0.01 * g_height;
+wd = 0.5 * g_width;
+document.write(
+'<img border=0 src="slide0002_image007.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.35 * g_height; myleft = 0.24 * g_width; myheight = 0.04 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.24 * g_width;
+yy = 0.35 * g_height;
+ht = 0.04 * g_height;
+wd = 0 * g_width;
+document.write(
+'<img border=0 src="slide0002_image008.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.35 * g_height; myleft = 0.4 * g_width; myheight = 0.04 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.4 * g_width;
+yy = 0.35 * g_height;
+ht = 0.04 * g_height;
+wd = 0 * g_width;
+document.write(
+'<img border=0 src="slide0002_image009.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.35 * g_height; myleft = 0.57 * g_width; myheight = 0.04 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.57 * g_width;
+yy = 0.35 * g_height;
+ht = 0.04 * g_height;
+wd = 0 * g_width;
+document.write(
+'<img border=0 src="slide0002_image010.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.35 * g_height; myleft = 0.74 * g_width; myheight = 0.03 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.74 * g_width;
+yy = 0.35 * g_height;
+ht = 0.03 * g_height;
+wd = 0 * g_width;
+document.write(
+'<img border=0 src="slide0002_image011.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.42 * g_height; myleft = 0.05 * g_width; myheight = 0.12 * g_height; mywidth = 0.06 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0.01 * g_width; myheight = 0.1 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-230 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:200%;color:#FFFF99'><b>F1<br>
+</b></span></div>
+</layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-230 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:200%;color:#FFFF99;mso-special-format:
+lastCR;display:none'><b><br>
+</b></span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.39 * g_height; myleft = 0.22 * g_width; myheight = 0.11 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.22 * g_width;
+yy = 0.39 * g_height;
+ht = 0.11 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0002_image012.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.39 * g_height; myleft = 0.38 * g_width; myheight = 0.11 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.38 * g_width;
+yy = 0.39 * g_height;
+ht = 0.11 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0002_image013.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.39 * g_height; myleft = 0.55 * g_width; myheight = 0.11 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.55 * g_width;
+yy = 0.39 * g_height;
+ht = 0.11 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0002_image014.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.39 * g_height; myleft = 0.72 * g_width; myheight = 0.11 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.72 * g_width;
+yy = 0.39 * g_height;
+ht = 0.11 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0002_image015.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.43 * g_height; myleft = 0.43 * g_width; myheight = 0.03 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.43 * g_width;
+yy = 0.43 * g_height;
+ht = 0.03 * g_height;
+wd = 0.11 * g_width;
+document.write(
+'<img border=0 src="slide0002_image016.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.6 * g_height; myleft = 0.2 * g_width; myheight = 0.03 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.2 * g_width;
+yy = 0.6 * g_height;
+ht = 0.03 * g_height;
+wd = 0.09 * g_width;
+document.write(
+'<img border=0 src="slide0002_image017.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.71 * g_height; myleft = 0.58 * g_width; myheight = 0.26 * g_height; mywidth = 0.2 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.03 * g_height; myleft = 0.01 * g_width; myheight = 0.22 * g_height; mywidth = 0.17 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.15 * g_height; mywidth = 0.17 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-269 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.17 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:center'><span style='font-family:Arial;font-size:117%;
+color:#FFFF99'><b>20 generations </b></span></span></layer><script>
+	mytop = 0.06 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.17 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:center'><span style='font-family:Arial;font-size:117%;
+color:#FFFF99'><b>brother-sister </b></span></span></layer><script>
+	mytop = 0.12 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.17 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:center'><span style='font-family:Arial;font-size:117%;
+color:#FFFF99'><b>matings</b></span><span style='font-family:Arial;font-size:
+233%;color:#FFFF99;display:none'><b><br>
+</b></span></span></layer></div>
+</layer><script>
+	mytop = 0.16 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.17 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-269 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:233%;
+color:#FFFF99;mso-special-format:lastCR;display:none'><b><br>
+</b></span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.6 * g_height; myleft = 0.5 * g_width; myheight = 0.03 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.5 * g_width;
+yy = 0.6 * g_height;
+ht = 0.03 * g_height;
+wd = 0.09 * g_width;
+document.write(
+'<img border=0 src="slide0002_image018.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.62 * g_height; myleft = 0.54 * g_width; myheight = 0.28 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.54 * g_width;
+yy = 0.62 * g_height;
+ht = 0.28 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0002_image019.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.61 * g_height; myleft = 0.79 * g_width; myheight = 0.03 * g_height; mywidth = 0.1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.79 * g_width;
+yy = 0.61 * g_height;
+ht = 0.03 * g_height;
+wd = 0.1 * g_width;
+document.write(
+'<img border=0 src="slide0002_image020.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.62 * g_height; myleft = 0.83 * g_width; myheight = 0.28 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.83 * g_width;
+yy = 0.62 * g_height;
+ht = 0.28 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0002_image021.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.92 * g_height; myleft = 0.21 * g_width; myheight = 0.09 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.07 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.07 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:150%;color:#FFFF99'>BXD1</span><span
+style='font-family:Arial;font-size:150%;color:#484848;display:none'><br>
+</span></div>
+</layer><script>
+	mytop = 0.04 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.06 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:150%;color:#484848;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.92 * g_height; myleft = 0.51 * g_width; myheight = 0.09 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.07 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.07 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:150%;color:#FFFF99'>BXD2<br>
+</span></div>
+</layer><script>
+	mytop = 0.04 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.06 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:150%;color:#FFFF99;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.92 * g_height; myleft = 0.8 * g_width; myheight = 0.05 * g_height; mywidth = 0.1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.03 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%;mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17;mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'>BXD80</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.9 * g_height; myleft = 0.64 * g_width; myheight = 0.17 * g_height; mywidth = 0.17 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0.01 * g_width; myheight = 0.15 * g_height; mywidth = 0.16 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.16 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-341 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:300%;color:#FFFF99'>+ � +<br>
+</span></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.13 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-341 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:300%;color:#FFFF99;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.62 * g_height; myleft = 0.04 * g_width; myheight = 0.12 * g_height; mywidth = 0.06 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.1 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-230 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:200%;color:#FFFF99'><b>F2<br>
+</b></span></div>
+</layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-230 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:200%;color:#FFFF99;mso-special-format:
+lastCR;display:none'><b><br>
+</b></span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.54 * g_height; myleft = 0.18 * g_width; myheight = 0.01 * g_height; mywidth = 0.75 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.18 * g_width;
+yy = 0.54 * g_height;
+ht = 0.01 * g_height;
+wd = 0.75 * g_width;
+document.write(
+'<img border=0 src="slide0002_image022.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.54 * g_height; myleft = 0.17 * g_width; myheight = 0.03 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.17 * g_width;
+yy = 0.54 * g_height;
+ht = 0.03 * g_height;
+wd = 0 * g_width;
+document.write(
+'<img border=0 src="slide0002_image023.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.54 * g_height; myleft = 0.32 * g_width; myheight = 0.03 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.32 * g_width;
+yy = 0.54 * g_height;
+ht = 0.03 * g_height;
+wd = 0 * g_width;
+document.write(
+'<img border=0 src="slide0002_image024.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.54 * g_height; myleft = 0.48 * g_width; myheight = 0.04 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.48 * g_width;
+yy = 0.54 * g_height;
+ht = 0.04 * g_height;
+wd = 0 * g_width;
+document.write(
+'<img border=0 src="slide0002_image025.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.54 * g_height; myleft = 0.62 * g_width; myheight = 0.04 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.62 * g_width;
+yy = 0.54 * g_height;
+ht = 0.04 * g_height;
+wd = 0 * g_width;
+document.write(
+'<img border=0 src="slide0002_image026.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.54 * g_height; myleft = 0.77 * g_width; myheight = 0.04 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.77 * g_width;
+yy = 0.54 * g_height;
+ht = 0.04 * g_height;
+wd = 0 * g_width;
+document.write(
+'<img border=0 src="slide0002_image027.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.54 * g_height; myleft = 0.92 * g_width; myheight = 0.03 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.92 * g_width;
+yy = 0.54 * g_height;
+ht = 0.03 * g_height;
+wd = 0 * g_width;
+document.write(
+'<img border=0 src="slide0002_image028.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.44 * g_height; myleft = 0.49 * g_width; myheight = 0.1 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.49 * g_width;
+yy = 0.44 * g_height;
+ht = 0.1 * g_height;
+wd = 0 * g_width;
+document.write(
+'<img border=0 src="slide0002_image029.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.57 * g_height; myleft = 0.15 * g_width; myheight = 0.11 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.15 * g_width;
+yy = 0.57 * g_height;
+ht = 0.11 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0002_image030.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.57 * g_height; myleft = 0.3 * g_width; myheight = 0.11 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.3 * g_width;
+yy = 0.57 * g_height;
+ht = 0.11 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0002_image031.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.57 * g_height; myleft = 0.46 * g_width; myheight = 0.11 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.46 * g_width;
+yy = 0.57 * g_height;
+ht = 0.11 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0002_image032.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.57 * g_height; myleft = 0.6 * g_width; myheight = 0.11 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.6 * g_width;
+yy = 0.57 * g_height;
+ht = 0.11 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0002_image033.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.57 * g_height; myleft = 0.75 * g_width; myheight = 0.11 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.75 * g_width;
+yy = 0.57 * g_height;
+ht = 0.11 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0002_image034.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.57 * g_height; myleft = 0.9 * g_width; myheight = 0.11 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.9 * g_width;
+yy = 0.57 * g_height;
+ht = 0.11 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0002_image035.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.84 * g_height; myleft = 0.56 * g_width; myheight = 0.01 * g_height; mywidth = 0.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.56 * g_width;
+yy = 0.84 * g_height;
+ht = 0.01 * g_height;
+wd = 0.01 * g_width;
+document.write(
+'<img border=0 src="slide0002_image036.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.8 * g_height; myleft = 0.25 * g_width; myheight = 0.11 * g_height; mywidth = 0.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.25 * g_width;
+yy = 0.8 * g_height;
+ht = 0.11 * g_height;
+wd = 0.01 * g_width;
+document.write(
+'<img border=0 src="slide0002_image037.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.84 * g_height; myleft = 0.86 * g_width; myheight = 0.02 * g_height; mywidth = 0.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.86 * g_width;
+yy = 0.84 * g_height;
+ht = 0.02 * g_height;
+wd = 0.01 * g_width;
+document.write(
+'<img border=0 src="slide0002_image038.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.75 * g_height; myleft = 0.01 * g_width; myheight = 0.13 * g_height; mywidth = 0.13 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0 * g_width; myheight = 0.11 * g_height; mywidth = 0.13 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.03 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'><b>BXD RI<br>
+</b></span></div>
+</layer><script>
+	mytop = 0.03 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.13 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'><b>Strain set<br>
+</b></span></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0.01 * g_width; myheight = 0.03 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99;mso-special-format:lastCR;display:none'><b><br>
+</b></span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.12 * g_height; myleft = 0.14 * g_width; myheight = 0.06 * g_height; mywidth = 0.1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.14 * g_width;
+yy = 0.12 * g_height;
+ht = 0.06 * g_height;
+wd = 0.1 * g_width;
+document.write(
+'<img border=0 src="slide0002_image039.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.1 * g_height; myleft = 0.76 * g_width; myheight = 0.08 * g_height; mywidth = 0.14 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.76 * g_width;
+yy = 0.1 * g_height;
+ht = 0.08 * g_height;
+wd = 0.14 * g_width;
+document.write(
+'<img border=0 src="slide0002_image040.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.2 * g_height; myleft = 0.17 * g_width; myheight = 0.13 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0 * g_width; myheight = 0.11 * g_height; mywidth = 0.08 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.07 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'>fully<br>
+</span></div>
+</layer><script>
+	mytop = 0.03 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.08 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'>inbred<br>
+</span></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.07 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.38 * g_height; myleft = 0.02 * g_width; myheight = 0.09 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'>isogenic<br>
+</span></div>
+</layer><script>
+	mytop = 0.04 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.54 * g_height; myleft = 0.01 * g_width; myheight = 0.13 * g_height; mywidth = 0.12 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0 * g_width; myheight = 0.11 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'>hetero-<br>
+</span></div>
+</layer><script>
+	mytop = 0.03 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'>geneous<br>
+</span></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.74 * g_height; myleft = 0.29 * g_width; myheight = 0.21 * g_height; mywidth = 0.21 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.19 * g_height; mywidth = 0.19 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.15 * g_height; mywidth = 0.19 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.19 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:center'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'>Recombined </span></span></layer><script>
+	mytop = 0.04 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.19 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:center'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'>chromosomes </span></span></layer><script>
+	mytop = 0.08 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.19 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:center'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'>are needed for </span></span></layer><script>
+	mytop = 0.12 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.19 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:center'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'>mapping<br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.16 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.19 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.1 * g_height; myleft = 0.25 * g_width; myheight = 0.09 * g_height; mywidth = 0.1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:150%;color:#FFFF99'>female<br>
+</span></div>
+</layer><script>
+	mytop = 0.04 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.07 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:150%;color:#FFFF99;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.1 * g_height; myleft = 0.64 * g_width; myheight = 0.09 * g_height; mywidth = 0.07 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.06 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.06 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:150%;color:#FFFF99'>male<br>
+</span></div>
+</layer><script>
+	mytop = 0.04 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.05 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:150%;color:#FFFF99;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.3 * g_height; myleft = 0.78 * g_width; myheight = 0.09 * g_height; mywidth = 0.19 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:117%;color:#FFFF99'>chromosome
+pair</span><span style='font-family:Arial;font-size:150%;color:#FFFF99;
+display:none'><br>
+</span></div>
+</layer><script>
+	mytop = 0.03 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.15 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:150%;color:#FFFF99;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.31 * g_height; myleft = 0.65 * g_width; myheight = 0.02 * g_height; mywidth = 0.12 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.65 * g_width;
+yy = 0.31 * g_height;
+ht = 0.02 * g_height;
+wd = 0.12 * g_width;
+document.write(
+'<img border=0 src="slide0002_image041.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.86 * g_height; myleft = 0.03 * g_width; myheight = 0.14 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.12 * g_height; mywidth = 0.08 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.07 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-134 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:117%;
+color:#E9EB5D'>Inbred<br>
+</span></div>
+</layer><script>
+	mytop = 0.03 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.08 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-134 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:117%;
+color:#E9EB5D'>Isogenic<br>
+</span></div>
+</layer><script>
+	mytop = 0.06 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.07 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-134 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:117%;
+color:#E9EB5D'>siblings</span><span style='font-family:Arial;font-size:117%;
+color:aqua;display:none'><br>
+</span></div>
+</layer><script>
+	mytop = 0.09 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.07 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-134 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:117%;
+color:aqua;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.79 * g_height; myleft = 0.83 * g_width; myheight = 0.11 * g_height; mywidth = 0.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.83 * g_width;
+yy = 0.79 * g_height;
+ht = 0.11 * g_height;
+wd = 0.01 * g_width;
+document.write(
+'<img border=0 src="slide0002_image042.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.84 * g_height; myleft = 0.83 * g_width; myheight = 0.02 * g_height; mywidth = 0.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.83 * g_width;
+yy = 0.84 * g_height;
+ht = 0.02 * g_height;
+wd = 0.01 * g_width;
+document.write(
+'<img border=0 src="slide0002_image043.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.79 * g_height; myleft = 0.53 * g_width; myheight = 0.11 * g_height; mywidth = 0.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.53 * g_width;
+yy = 0.79 * g_height;
+ht = 0.11 * g_height;
+wd = 0.01 * g_width;
+document.write(
+'<img border=0 src="slide0002_image044.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.83 * g_height; myleft = 0.53 * g_width; myheight = 0.01 * g_height; mywidth = 0.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.53 * g_width;
+yy = 0.83 * g_height;
+ht = 0.01 * g_height;
+wd = 0.01 * g_width;
+document.write(
+'<img border=0 src="slide0002_image045.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.8 * g_height; myleft = 0.23 * g_width; myheight = 0.11 * g_height; mywidth = 0.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.23 * g_width;
+yy = 0.8 * g_height;
+ht = 0.11 * g_height;
+wd = 0.01 * g_width;
+document.write(
+'<img border=0 src="slide0002_image046.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.18 * g_height; myleft = 0.43 * g_width; myheight = 0.09 * g_height; mywidth = 0.13 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.12 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%;mso-line-spacing:"-341 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17;mso-line-spacing:"-341 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17'><span style='font-family:Arial;font-size:300%;
+color:aqua'>B</span><span style='font-family:Arial;font-size:300%;color:#FFFF99'>X</span><span
+style='font-family:Arial;font-size:300%;color:#FF1911'>D</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.27 * g_height; myleft = 0.32 * g_width; myheight = 0.04 * g_height; mywidth = 0.31 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.32 * g_width;
+yy = 0.27 * g_height;
+ht = 0.04 * g_height;
+wd = 0.31 * g_width;
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+//-->
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+</layer><script>
+	mytop = 0.57 * g_height; myleft = 0.75 * g_width; myheight = 0.05 * g_height; mywidth = 0.01 * g_width;
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+</script>
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+</script></div>
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+//-->
+</script></div>
+</layer><script>
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+</script>
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+</layer><script>
+	mytop = 0.61 * g_height; myleft = 0.63 * g_width; myheight = 0.08 * g_height; mywidth = 0.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
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+//-->
+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>The next few slides
+   provide a short introduction to mapping the loci that are responsible for
+   variation in a trait such as App expression level. These modulatory regions
+   of the genome are sometimes called quantitative trait loci or QTLs. You may
+   want to do some independent reading on this topic if this is your first
+   exposure to QTL analysis.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>The genetic reference
+   population (GRP) of BXD recombinant inbred strains were originally generated
+   about 25 years ago by Benjamin Taylor at The Jackson Laboratory. He crossed
+   female C57BL/6J mice with male DBA/2J mice to generate the F1 and F2
+   progeny. At the bottom of this slide we have schematized one chromosome pair
+   from three of the BXD RI strains.<span style="mso-spacerun: yes">&nbsp;
+   </span>The dashed vertical lines that lead to the final BXD RI lines involve
+   21 full sib matings (about 7 years of breeding). Some lines die out during
+   inbreeding. For example, there is no longer any BXD3 strain.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Notes:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>1. Over the last decade,
+   our group (Lu Lu and Rob Williams) and Jeremy Peirce and Lee Silver at
+   Princeton have enlarged Ben Taylor�s set. There are now just over 80 BXD
+   strains. They have all been genotyped using about 13,700 markers (SNPs and
+   microsatellites). These markers are used to define the �blue� and �red�
+   regions of the chromosomes as shown in the figure above.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>2. Chromosomes of RI GRPs
+   usually have about 4 times as many recombinations as those of F2 animals.
+   However, unlike an F2, both chromosomes of an RI are identical. Therefore,
+   50 RI strains contain as many recombinations as 100 F2 animals.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>3. BXD43 through BXD100
+   were generated using a special method that resulted in a further doubling of
+   the average recombination density per chromosome. The entire set of 80 BXDs
+   therefore contains as many recombinations as about 260 F2 animals.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0016_image036.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0016_image036.png
new file mode 100755
index 00000000..baa1d807
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0016_image036.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0016_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0016_notes_pane.htm
new file mode 100755
index 00000000..f5776dad
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0016_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>We have computed the
+  Network Graph, now using other types of traits.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Saline Hot Plate Latency
+  is the green node labeled 10020.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Freezing (fear) is the
+  green node labeled 10447.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Notes:</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0017.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0017.htm
new file mode 100755
index 00000000..cc8ff93a
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0017.htm
@@ -0,0 +1,421 @@
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+<head>
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+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
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+href="webqtl_demo2.ppt.ppt">
+<script>
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+ht = 0.05 * g_height;
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+</layer><script>
+	mytop = 0.4 * g_height; myleft = 0.74 * g_width; myheight = 0.07 * g_height; mywidth = 0.11 * g_width;
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+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
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+</script>
+<div style='mso-line-spacing:"-126 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Gadget;font-size:150%;color:white'>aa<br>
+</span></div>
+</layer><script>
+	mytop = 0.03 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.11 * g_width;
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+</script>
+<div style='mso-line-spacing:"-126 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Gadget;font-size:150%;color:white;mso-special-format:
+lastCR;display:none'><br>
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+</layer></div>
+</layer><script>
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+ht = 0.05 * g_height;
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+'<img border=0 src="slide0003_image055.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
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+</script></div>
+</layer><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-126 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Gadget;font-size:150%;color:white'>aaaa<br>
+</span></div>
+</layer><script>
+	mytop = 0.03 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-126 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Gadget;font-size:150%;color:white;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.2 * g_height; myleft = 0.71 * g_width; myheight = 0.19 * g_height; mywidth = 0.25 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0.01 * g_width; myheight = 0.16 * g_height; mywidth = 0.24 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
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+</script>
+<div style='mso-line-spacing:"-384 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><span style='font-size:267%;color:#E2EBF0'>D2 strain</span><span
+style='font-family:Palatino;font-size:333%;color:#FBFDB8;display:none'><br>
+</span></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.21 * g_width;
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+</script>
+<div style='mso-line-spacing:"-384 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><span style='font-family:Palatino;font-size:333%;color:#FBFDB8;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.43 * g_height; myleft = 0.71 * g_width; myheight = 0.19 * g_height; mywidth = 0.25 * g_width;
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+</script>
+<div><script>
+	mytop = 0.02 * g_height; myleft = 0.01 * g_width; myheight = 0.16 * g_height; mywidth = 0.24 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.24 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-384 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><span style='font-size:267%;color:#F6BF69'>B6 strain</span><span
+style='font-family:Palatino;font-size:333%;color:#F6BF69;display:none'><br>
+</span></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.21 * g_width;
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+</script>
+<div style='mso-line-spacing:"-384 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><span style='font-family:Palatino;font-size:333%;color:#F6BF69;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.17 * g_height; myleft = 0.31 * g_width; myheight = 0.42 * g_height; mywidth = 0.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.31 * g_width;
+yy = 0.17 * g_height;
+ht = 0.42 * g_height;
+wd = 0.01 * g_width;
+document.write(
+'<img border=0 src="slide0003_image056.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.4 * g_height; myleft = 0.31 * g_width; myheight = 0.03 * g_height; mywidth = 0.39 * g_width;
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+</script>
+<div><script language=JavaScript><!--
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+yy = 0.4 * g_height;
+ht = 0.03 * g_height;
+wd = 0.39 * g_width;
+document.write(
+'<img border=0 src="slide0003_image057.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.2 * g_height; myleft = 0.38 * g_width; myheight = 0.26 * g_height; mywidth = 0.3 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0.01 * g_width; myheight = 0.23 * g_height; mywidth = 0.27 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.13 * g_height; mywidth = 0.27 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-320 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.27 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'><i>amount of
+</i></span></span></layer><script>
+	mytop = 0.07 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.27 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'><i>transcript</i></span><span
+style='font-family:Palatino;font-size:367%;color:#E9EB5D;display:none'><br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.14 * g_height; myleft = 0 * g_width; myheight = 0.09 * g_height; mywidth = 0.27 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-422 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><span style='font-family:Palatino;font-size:367%;color:#E9EB5D;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.06 * g_height; myleft = 0.72 * g_width; myheight = 0.19 * g_height; mywidth = 0.21 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0.01 * g_width; myheight = 0.16 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-384 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><span style='font-size:267%;color:white'>4 </span><span style='font-size:
+233%;color:white'>units</span><span style='font-family:Palatino;font-size:333%;
+color:#E9EB5D;display:none'><br>
+</span></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-384 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><span style='font-family:Palatino;font-size:333%;color:#E9EB5D;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.29 * g_height; myleft = 0.72 * g_width; myheight = 0.19 * g_height; mywidth = 0.21 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.02 * g_height; myleft = 0.01 * g_width; myheight = 0.16 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-384 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><span style='font-size:267%;color:white'>2</span><span style='font-size:
+233%;color:white'> units</span><span style='font-family:Palatino;font-size:
+333%;color:#E9EB5D;display:none'><br>
+</span></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-384 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><span style='font-family:Palatino;font-size:333%;color:#E9EB5D;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.15 * g_height; myleft = 0.31 * g_width; myheight = 0.05 * g_height; mywidth = 0.4 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.31 * g_width;
+yy = 0.15 * g_height;
+ht = 0.05 * g_height;
+wd = 0.4 * g_width;
+document.write(
+'<img border=0 src="slide0003_image058.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.17 * g_height; myleft = 0.09 * g_width; myheight = 0.16 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-350 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:300%;color:#E2EBF0'>D<br>
+</span></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-350 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:300%;color:#E2EBF0;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.17 * g_height; myleft = 0.17 * g_width; myheight = 0.16 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-350 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:300%;color:#F6BF69'>B<br>
+</span></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-350 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:300%;color:#F6BF69;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.79 * g_height; myleft = 0.05 * g_width; myheight = 0.13 * g_height; mywidth = 1.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.12 * g_height; mywidth = 1.02 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%;mso-line-spacing:"-256 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17;mso-line-spacing:"-256 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 1.02 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E2EBF0'>D</span><span
+style='font-size:233%;color:#E9EB5D'> </span><span style='font-size:200%;
+color:#E9EB5D'>and </span><span style='font-size:233%;color:#F6BF69'>B</span><span
+style='font-size:233%;color:#E9EB5D'> </span><span style='font-size:200%;
+color:#E9EB5D'>may be SNP-like variants in the promoter </span></span></layer><script>
+	mytop = 0.04 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 1.02 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:200%;color:#E9EB5D'>itself (cis
+QTL) or in </span><span style='font-size:200%;color:#EAEC5E'>upstream genes
+(trans QTLs)</span><span style='font-size:300%;color:#E9EB5D'>.</span></span></layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0.04 * g_width; myheight = 0.16 * g_height; mywidth = 0.22 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.22 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-233 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-size:200%;color:#E9EB5D'>UPSTREAM<br>
+</span></div>
+</layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.22 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-233 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-size:200%;color:#E9EB5D'>modulators<br>
+</span></div>
+</layer><script>
+	mytop = 0.1 * g_height; myleft = 0.01 * g_width; myheight = 0.05 * g_height; mywidth = 0.2 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-233 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-size:200%;color:#E9EB5D;
+mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0.44 * g_width; myheight = 0.17 * g_height; mywidth = 0.16 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.16 * g_height; mywidth = 0.14 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.14 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-350 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><span style='font-size:300%;color:#E2EBF0'>High<br>
+</span></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.14 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-350 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><span style='font-size:300%;color:#E2EBF0;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.63 * g_height; myleft = 0.08 * g_width; myheight = 0.17 * g_height; mywidth = 0.06 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.16 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-350 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:300%;color:#E2EBF0'>D<br>
+</span></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-350 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:300%;color:#E2EBF0;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.63 * g_height; myleft = 0.15 * g_width; myheight = 0.17 * g_height; mywidth = 0.05 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.16 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-350 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:300%;color:#F6BF69'>B<br>
+</span></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-350 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:300%;color:#F6BF69;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.71 * g_height; myleft = 0.07 * g_width; myheight = 0.12 * g_height; mywidth = 0.16 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.1 * g_height; mywidth = 0.14 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.14 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-233 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:200%;color:#E9EB5D'><i>cis QTL</i></span><span
+style='font-size:200%;color:#E9EB5D;display:none'><br>
+</span></div>
+</layer><script>
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+<div style='mso-line-spacing:"-233 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:200%;color:#E9EB5D'><i>trans QTL</i></span><span
+style='font-size:200%;color:#E9EB5D;display:none'><br>
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+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>This slide is
+   illustrates two major types of QTLs that modulate variability in
+   transcript-relative steady state abundance.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>1. cis QTLs are defined
+   as QTLs that are closely linked to the gene whose transcript is the measured
+   trait. For example, a polymorphism in the promoter that affects binding of a
+   transcription factor. However, cis QTLs can be far upstream or downstream polymorphisms
+   in enhancers or may be in 3� UTR binding sites that affect message
+   stability.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>2. trans QTLs map far
+   enough away from the location of the gene that gives rise to the transcript
+   that is being measured so that we can be fairly certain that the QTL is not
+   in the gene itself. The most blatant type of trans QTL would be a
+   polymorphism in a transcription factor. But in the majority of cases, the
+   trans QTLs can be far removed in a mechanistic sense from the actual events
+   modulating transcript abundance. That is why there are three overlapping
+   arrows in the figure.<span style="mso-spacerun: yes">&nbsp; </span>The way
+   in which an upstream polymorphism influences a downstream difference in mRNA
+   abundance can be indirect. Effects can:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3><span
+   style="mso-spacerun: yes">&nbsp;&nbsp; </span>a.<span style="mso-spacerun:
+   yes">&nbsp; </span>cross tissue types (a polymorphic liver enzyme may affect
+   CNS gene expression)</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3><span
+   style="mso-spacerun: yes">&nbsp;&nbsp; </span>b.<span style="mso-spacerun:
+   yes">&nbsp; </span>cross time (the modulator is only expressed for one day
+   during development but has permanent effects in adults)</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3><span
+   style="mso-spacerun: yes">&nbsp;&nbsp; </span>c.<span style="mso-spacerun:
+   yes">&nbsp; </span>may be contingent on environmental factors (heat shock
+   may trigger the expression of a polymorphic factor that affects mRNA
+   abundance).</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
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+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
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+	g_height = g_width * g_origHeight / g_origWidth;
+else
+	g_width = g_origWidth * g_height / g_origHeight;
+	
+g_top = (window.innerHeight - g_height) / 2;
+g_left = (window.innerWidth - g_width) / 2;
+
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+document.SlideLayer.clip.left = 0;
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+document.SlideLayer.clip.width = g_width;
+function new_font_size() {
+	var size = 11 * g_width / g_origWidth;
+	if ( size < 1 ) size = 1;
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+</script>
+<div id=SlideObj class=sld style='position:relative;font-size:&{new_font_size()};'><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.png" height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.38 * g_height; myleft = 0.05 * g_width; myheight = 0.45 * g_height; mywidth = 0.84 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.05 * g_width;
+yy = 0.38 * g_height;
+ht = 0.45 * g_height;
+wd = 0.84 * g_width;
+document.write(
+'<img border=0 src="slide0004_image063.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.05 * g_height; myleft = 0.02 * g_width; myheight = 0.08 * g_height; mywidth = 0.93 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0.01 * g_width; myheight = 0.06 * g_height; mywidth = 0.91 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:"-358 0 -1";mso-line-spacing:"-358 0 -1"'><span
+style='font-family:Verdana;font-size:64%'>Discovering upstream modulatory loci</span><span
+style='font-family:Verdana;font-size:73%;mso-special-format:lastCR;display:
+none'><i><br>
+</i></span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.2 * g_height; myleft = 0.18 * g_width; myheight = 0.25 * g_height; mywidth = 0.19 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.18 * g_width;
+yy = 0.2 * g_height;
+ht = 0.25 * g_height;
+wd = 0.19 * g_width;
+document.write(
+'<img border=0 src="slide0004_image064.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.32 * g_height; myleft = 0.78 * g_width; myheight = 0.25 * g_height; mywidth = 0.19 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.78 * g_width;
+yy = 0.32 * g_height;
+ht = 0.25 * g_height;
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+'<img border=0 src="slide0004_image065.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Please bring the Trait
+   Data and Analysis window to the front and look for the Interval Mapping
+   button. Confirm that you are back to the trait amyloid beta precursor
+   protein.<span style="mso-spacerun: yes">&nbsp; </span>If so, then just click
+   the button.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Notice that the default
+   for:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Select Chrs (chromosomes)
+   is ALL</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Select Mapping Scale is
+   set to GENETIC</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Options: Permutation test
+   YES<span style="mso-spacerun: yes">&nbsp; </span>(2000 is the default
+   number)</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Options: Bootstrap test
+   YES (2000 is the default number)</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0018_image037.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0018_image037.png
new file mode 100755
index 00000000..a1cb20e4
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0018_image037.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0018_image038.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0018_image038.png
new file mode 100755
index 00000000..e06bd0db
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0018_image038.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0018_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0018_notes_pane.htm
new file mode 100755
index 00000000..9e0445f3
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0018_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Part 2: Discovering
+  upstream modulators and quantitative trait loci (QTLs). A quantitative trait
+  locus is a chromosomal region that harbors one or a few polymorphic gene loci
+  that influence a trait. We are going to be looking for QTLs that modulate the
+  steady state expression level of App in the adult mouse forebrain.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0019.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0019.htm
new file mode 100755
index 00000000..43fc12fd
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0019.htm
@@ -0,0 +1,155 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Aug-15-05: WebQTL searches for upstream controllers">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
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+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
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+		min = window.innerHeight/20;
+		
+	return min+"pt";
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+	self.location.reload();
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+	document.SlideLayer.height = window.innerHeight;
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+document.captureEvents(Event.MOUSEDOWN);
+document.captureEvents(Event.KEYPRESS);
+document.onkeypress = _KPH ;
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+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0019.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
+bgcolor="#000000">
+<script>
+
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.png" height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.08 * g_height; mywidth = 1.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:"-358 0 -1";mso-margin-left-alt:233;
+mso-text-indent-alt:0;mso-line-spacing:"-358 0 -1";mso-margin-left-alt:233;
+mso-text-indent-alt:0'><span style='font-family:Verdana;font-size:64%'><i>WebQTL
+searches for upstream controllers</i></span><span style='font-family:Verdana;
+font-size:73%;mso-special-format:lastCR;display:none'><i><br>
+</i></span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.71 * g_height; myleft = 0.34 * g_width; myheight = 0.19 * g_height; mywidth = 0.45 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.18 * g_height; mywidth = 0.44 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.44 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:167%;color:#E9EB5D'><i>App maps
+on Chr 16 (blue </i></span></span></layer><script>
+	mytop = 0.04 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.44 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:167%;color:#E9EB5D'><i>arrow
+points to the orange </i></span></span></layer><script>
+	mytop = 0.09 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.38 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:167%;color:#E9EB5D'><i>triangle)
+but the best </i></span></span></layer><script>
+	mytop = 0.13 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.38 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:167%;color:#E9EB5D'><i>locus is
+on Chr 7.</i></span><span style='font-size:233%;color:#E9EB5D;mso-special-format:
+lastCR;display:none'><i><br>
+</i></span></span></layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0.01 * g_width; myheight = 0.53 * g_height; mywidth = 0.98 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.01 * g_width;
+yy = 0.08 * g_height;
+ht = 0.53 * g_height;
+wd = 0.98 * g_width;
+document.write(
+'<img border=0 src="slide0005_image066.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.46 * g_height; myleft = 0.15 * g_width; myheight = 0.53 * g_height; mywidth = 0.15 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.15 * g_width;
+yy = 0.46 * g_height;
+ht = 0.53 * g_height;
+wd = 0.15 * g_width;
+document.write(
+'<img border=0 src="slide0005_image067.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.46 * g_height; myleft = 0.8 * g_width; myheight = 0.53 * g_height; mywidth = 0.1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.8 * g_width;
+yy = 0.46 * g_height;
+ht = 0.53 * g_height;
+wd = 0.1 * g_width;
+document.write(
+'<img border=0 src="slide0005_image068.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.41 * g_height; myleft = 0.76 * g_width; myheight = 0.22 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.76 * g_width;
+yy = 0.41 * g_height;
+ht = 0.22 * g_height;
+wd = 0.11 * g_width;
+document.write(
+'<img border=0 src="slide0005_image069.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.41 * g_height; myleft = 0.29 * g_width; myheight = 0.24 * g_height; mywidth = 0.12 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.29 * g_width;
+yy = 0.41 * g_height;
+ht = 0.24 * g_height;
+wd = 0.12 * g_width;
+document.write(
+'<img border=0 src="slide0005_image070.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>This is a major output
+   type: a so-called full-genome interval map.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>The X-axis represents all
+   19 autosomes and the X chromosome as if they were laid end to end with short
+   gaps between the telomere of one chromosome and the centromere of the next
+   chromosome (mouse chromosomes only have a single long arm and the centromere
+   represents the origin of each chromosome for numerical purpose: 0
+   centimorgans at almost 0 megabases). The blue labels along the bottom of the
+   figure list a subset of the 3795 markers that were used in mapping.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>The thick blue wavy line
+   running across chromosomes summarizes the strength of association between
+   variation in the phenotype (App expression differences) and the two
+   genotypes of all markers and the intervals between markers (hence, interval
+   mapping).<span style="mso-spacerun: yes">&nbsp; </span>The height of the
+   wave (blue Y-axis to the left) provides the likelihood ratio statistic
+   (LRS). Divide by 4.61 to convert these values to LOD scores.<span
+   style="mso-spacerun: yes">&nbsp; </span>Or you can read them as a
+   chi-square-like statistic.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>The red line and the red
+   axis to the far right provide an estimate of the effect that a QTL has on
+   expression of App (this estimate of the so-called additive effect tends to
+   be too high). If the red line is below the X-axis then this means that the
+   allele inherited from C57BL/6J (B6 or B) at a particular marker is
+   associated with higher values. If the red line is above the X-axis then the
+   DBA/2J allele (D2 or D) is associated with higher trait values. Multiply the
+   additive effect size by 2 to estimate the difference between the set of
+   strains that have the B/B genotype and those that have the D/D genotype at a
+   specific marker. For example, on distal Chr 7 the red line peaks at a value
+   of about 0.2. That means that this region of chromosome 2 is responsible for
+   a 0.4 unit expression difference between B/B strains and the D/D strains.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>The yellow histogram
+   bars: These summarize the results of a whole-genome bootstrap of the trait
+   that is performed 1000 times. What is a bootstrap? A bootstrap provides a
+   method to evaluate whether results are robust. If we drop out one strain, do
+   we still get the same results? When mapping quantitative traits, each strain
+   normally gets one equally weighted vote. But using the bootstrap procedure,
+   we give each strain a random weighting factor of between 0 and 1.<span
+   style="mso-spacerun: yes">&nbsp; </span>We then remap the trait and find THE
+   SINGLE BEST LRS VALUE per bootstrap. We do this 1000 times. In this example,
+   most bootstrap results cluster on Chr 3 and Chr 7 under the LRS peaks. That
+   is somewhat reassuring. But notice that a substantial number of bootstrap
+   are scattered around on other chromosomes. About 30% of the bootstrap
+   resamples have a peak on Chr 7. That is pretty good, but does makes us
+   realize that the sample we are working with is still quite small and
+   fragile.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>The horizontal dashed
+   lines at 10.5 and 17.3 are the likelihood ratio statistic (LRS) values
+   associated with the suggestive and significant genome-wide probabilities
+   that were established by permutations of phenotypes across genotypes. We
+   shuffle randomly 2000 times and obtain a distribution of peak LRS scores to
+   generate a null distribution. Five percent of the time, one of these
+   permuted data sets will have a peak LRS higher than 17.3. We call that level
+   the 0.05 significance threshold for a whole genome scan. The p = 0.67 point
+   is the suggestive level, and corresponds to the green dashed line.<span
+   style="mso-spacerun: yes">&nbsp; </span>These thresholds are conservative
+   for transcripts that have expression variation that is highly heritable. The
+   putative or suggestive QTL on Chr 3 is probably more than just suggestive.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>One other point: the
+   mapping procedure we use is computationally very fast, but it is relatively
+   simple. We are not looking for gene-gene interactions and we are not fitting
+   multiple QTLs in combinations. Consider this QTL analysis a first pass that
+   will highlight hot spots and warm spots that are worth following up on using
+   more sophisticated models.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>CLICKABLE REGIONS:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>1. If you click on the
+   Chromosome number then you will generate a new map just for that chromosome.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>2. If you click on the
+   body of the map, say on the blue line, then you will generate a view on a 10
+   Mb window of that part of the genome from the UCSC Genome Browser web site.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>3. If you click on a
+   marker symbol, then you will generate a new Trait data and Analysis window
+   with the genotypes loaded into the window just like any other trait. More on
+   this in Section 3.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>4. You can drag these
+   maps off of the browser window and onto your desktop. They will be saved as
+   PNG or PDF files. You can import them into Photoshop or other programs.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>5. There is also an
+   option at the bottom of the page to download a 2X higher resolution image of
+   this plot for papers and presentations.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>6. You can also download
+   the results of the analysis in a text format</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
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+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>The next few slides
+  provide a short introduction to mapping the loci that are responsible for
+  variation in a trait such as App expression level. These modulatory regions
+  of the genome are sometimes called quantitative trait loci or QTLs. You may
+  want to do some independent reading on this topic if this is your first
+  exposure to QTL analysis.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>The genetic reference
+  population (GRP) of BXD recombinant inbred strains were originally generated
+  about 25 years ago by Benjamin Taylor at The Jackson Laboratory. He crossed
+  female C57BL/6J mice with male DBA/2J mice to generate the F1 and F2 progeny.
+  At the bottom of this slide we have schematized one chromosome pair from
+  three of the BXD RI strains.<span style="mso-spacerun: yes">&nbsp; </span>The
+  dashed vertical lines that lead to the final BXD RI lines involve 21 full sib
+  matings (about 7 years of breeding). Some lines die out during inbreeding.
+  For example, there is no longer any BXD3 strain.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>1. Over the last decade,
+  our group (Lu Lu and Rob Williams) and Jeremy Peirce and Lee Silver at
+  Princeton have enlarged Ben Taylor�s set. There are now just over 80 BXD
+  strains. They have all been genotyped using about 13,700 markers (SNPs and
+  microsatellites). These markers are used to define the �blue� and �red�
+  regions of the chromosomes as shown in the figure above.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>2. Chromosomes of RI GRPs
+  usually have about 4 times as many recombinations as those of F2 animals.
+  However, unlike an F2, both chromosomes of an RI are identical. Therefore, 50
+  RI strains contain as many recombinations as 100 F2 animals.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>3. BXD43 through BXD100
+  were generated using a special method that resulted in a further doubling of
+  the average recombination density per chromosome. The entire set of 80 BXDs
+  therefore contains as many recombinations as about 260 F2 animals.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
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+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
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+<meta name=Description
+content="Aug-15-05: Genetic versus Physical maps for App expression">
+<style media=print>
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+<div><script>
+	mytop = 0.01 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 1.15 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:"-358 0 -1";mso-margin-left-alt:233;
+mso-text-indent-alt:0;mso-line-spacing:"-358 0 -1";mso-margin-left-alt:233;
+mso-text-indent-alt:0'><span style='font-family:Verdana;font-size:64%'><i>Genetic
+versus Physical maps for App expression</i></span><span style='font-family:
+Verdana;font-size:73%;mso-special-format:lastCR;display:none'><i><br>
+</i></span></div>
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+//-->
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+</layer><script>
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+</script>
+<div><script language=JavaScript><!--
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+</script></div>
+</layer><script>
+	mytop = 0.91 * g_height; myleft = 0.05 * g_width; myheight = 0.07 * g_height; mywidth = 0.95 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:117%;color:#E9EB5D'><i>The
+difference between genetic and physical scale is analogous to measuring the </i></span></span></layer><script>
+	mytop = 0.03 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.92 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:117%;color:#E9EB5D'><i>separation
+between New York and Boston in either travel hours or kilometers</i></span><span
+style='font-size:150%;color:#E9EB5D'><i>.</i></span><span style='font-size:
+167%;color:#E9EB5D;mso-special-format:lastCR;display:none'><i><br>
+</i></span></span></layer></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>The map on the top has an
+   X-axis scale based on frequency of recombinations events between markers (B
+   to D transitions, see slide 19 for a color-coded example). These so-called
+   genetic maps are scaled in centimorgan (recombinations per 100 gametes). In
+   contrast, the physical map shown below the genetic map has an X-axis scale
+   based on DNA length measured in nucleotides or base-pairs. Notice the large
+   difference between the two maps in the size of Chr 19 (large on the genetic
+   scale but small on the physical scale).</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Also notice the large
+   difference in the width of the chromosome 7 QTL peak. In mice,
+   recombinations occur with higher frequency toward the telomeric side (right
+   side) of each chromosome. As a result, genetic maps are stretched out more
+   toward the telomere relative to a physical map. The QTL on distal Chr 7 is
+   therefore actually more precisely mapped than might appear looking at the
+   genetic map.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>The physical scale is
+   becoming more useful than the genetic scale primarily because many other
+   data types can be easily superimposed on a physical map. You will see more
+   examples in the next several slides.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
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+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
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+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>This slide is
+  illustrates two major types of QTLs that modulate variability in
+  transcript-relative steady state abundance.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>1. cis QTLs are defined
+  as QTLs that are closely linked to the gene whose transcript is the measured
+  trait. For example, a polymorphism in the promoter that affects binding of a
+  transcription factor. However, cis QTLs can be far upstream or downstream polymorphisms
+  in enhancers or may be in 3� UTR binding sites that affect message stability.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>2. trans QTLs map far
+  enough away from the location of the gene that gives rise to the transcript
+  that is being measured so that we can be fairly certain that the QTL is not
+  in the gene itself. The most blatant type of trans QTL would be a
+  polymorphism in a transcription factor. But in the majority of cases, the
+  trans QTLs can be far removed in a mechanistic sense from the actual events
+  modulating transcript abundance. That is why there are three overlapping
+  arrows in the figure.<span style="mso-spacerun: yes">&nbsp; </span>The way in
+  which an upstream polymorphism influences a downstream difference in mRNA
+  abundance can be indirect. Effects can:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2><span
+  style="mso-spacerun: yes">&nbsp;&nbsp; </span>a.<span style="mso-spacerun:
+  yes">&nbsp; </span>cross tissue types (a polymorphic liver enzyme may affect
+  CNS gene expression)</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2><span
+  style="mso-spacerun: yes">&nbsp;&nbsp; </span>b.<span style="mso-spacerun:
+  yes">&nbsp; </span>cross time (the modulator is only expressed for one day
+  during development but has permanent effects in adults)</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2><span
+  style="mso-spacerun: yes">&nbsp;&nbsp; </span>c.<span style="mso-spacerun:
+  yes">&nbsp; </span>may be contingent on environmental factors (heat shock may
+  trigger the expression of a polymorphic factor that affects mRNA abundance).</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
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+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
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+}
+</script>
+<div id=SlideObj class=sld style='position:relative;font-size:&{new_font_size()};'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 1 * g_height; mywidth = 1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.png" height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.08 * g_height; mywidth = 1.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.98 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:"-358 0 -1";mso-margin-left-alt:233;
+mso-text-indent-alt:0;mso-line-spacing:"-358 0 -1";mso-margin-left-alt:233;
+mso-text-indent-alt:0'><span style='font-family:Verdana;font-size:64%'>Physical
+map for distal chromosome 7</span><span style='font-family:Verdana;font-size:
+73%;mso-special-format:lastCR;display:none'><i><br>
+</i></span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0.05 * g_width; myheight = 0.06 * g_height; mywidth = 0.94 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.04 * g_height; mywidth = 0.92 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><span style='font-size:167%;color:#E9EB5D'>Distal Chr 7 from
+~120 and 132 Mb may modulate</span><span style='font-size:167%;color:#E9EB5D'><i>
+App</i></span><span style='font-size:200%;color:#E9EB5D;mso-special-format:
+lastCR;display:none'><i><br>
+</i></span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.93 * g_height; myleft = 0.06 * g_width; myheight = 0.03 * g_height; mywidth = 0.75 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.06 * g_width;
+yy = 0.93 * g_height;
+ht = 0.03 * g_height;
+wd = 0.75 * g_width;
+document.write(
+'<img border=0 src="slide0007_image073.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.15 * g_height; myleft = 0.06 * g_width; myheight = 0.75 * g_height; mywidth = 0.68 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.06 * g_width;
+yy = 0.15 * g_height;
+ht = 0.75 * g_height;
+wd = 0.68 * g_width;
+document.write(
+'<img border=0 src="slide0007_image075.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Physical map of variation
+   in App expression in brain on distal Chr 7 (a blow up of the whole-genome
+   map on the previous slide).</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Notes:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Arial size=3>1.</font><font
+   face=Verdana size=3> You can now see that the X-axis is on a physical scale
+   of megabases (Mb). The QTL peak is roughly between 120 and 132 Mb.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>2. The small irregular
+   colored blocks and marks toward the top of the map mark the locations of
+   genes superimposed on the physical map. Neighboring genes are offset
+   slightly in the vertical axis for display purpose. Note one region of very
+   high gene density from about 120 to 123 Mb.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>3. The orange hash marks
+   along the X-axis represent the number of single nucleotide polymorphisms
+   that distinguish the two parental strains (C57BL/6J and DBA/2J) from each
+   other. We call this the SNP seismograph track (see Glossary for more
+   details). Regions with low numbers of SNPs have closely matched sequences
+   and are less likely to contain QTLs.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>4. As before, the thin
+   red line shows the additive effect size. By convention the positive values
+   signify the D alleles are associated with higher expression of App in this
+   region of Chr 7 than the B alleles. The maximum effect size is about +0.20
+   log2 expression units per D allele. The differences been the BB and DD
+   genotypes (BB and DD because each strain has two alleles; one per
+   chromosome) is therefore about 2^0.4 = 1.32 or a 32% increment in DD
+   relative to BB at this locus.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>5. If you scroll just
+   under the Physical Map you will see text that reads �DISPLAY from XXX Mb TO
+   YYY Mb�..�<span style="mso-spacerun: yes">&nbsp; </span>These physical maps
+   are zoomable, a feature we will exploit to evaluate candidate genes in this
+   QTL interval.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0021_image099.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0021_image099.png
new file mode 100755
index 00000000..891bc06c
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0021_image099.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0021_image100.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0021_image100.png
new file mode 100755
index 00000000..8905caa6
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0021_image100.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0021_image101.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0021_image101.png
new file mode 100755
index 00000000..7f5a5295
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0021_image101.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0021_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0021_notes_pane.htm
new file mode 100755
index 00000000..b1988954
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0021_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Please bring the Trait
+  Data and Analysis window to the front and look for the Interval Mapping
+  button. Confirm that you are back to the trait amyloid beta precursor
+  protein.<span style="mso-spacerun: yes">&nbsp; </span>If so, then just click
+  the button.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Notice that the default
+  for:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Select Chrs (chromosomes)
+  is ALL</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Select Mapping Scale is
+  set to GENETIC</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Options: Permutation test
+  YES<span style="mso-spacerun: yes">&nbsp; </span>(2000 is the default number)</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Options: Bootstrap test
+  YES (2000 is the default number)</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0022.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0022.htm
new file mode 100755
index 00000000..25d9a02e
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0022.htm
@@ -0,0 +1,134 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content="Aug-15-05: Evaluating candidate genes">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
+		min = window.innerHeight/20;
+		
+	return min+"pt";
+}
+var SoundEnabled = navigator.plugins && navigator.plugins["LiveAudio"];
+function restore() {
+	self.location.reload();
+}
+function set_size() {
+	document.SlideLayer.width = window.innerWidth;
+	document.SlideLayer.height = window.innerHeight;
+}
+document.captureEvents(Event.MOUSEDOWN);
+document.captureEvents(Event.KEYPRESS);
+document.onkeypress = _KPH ;
+document.onmousedown = _KPH ;
+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0022.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
+bgcolor="#000000">
+<script>
+
+g_origHeight = 566;
+g_origWidth = 755;
+g_width = window.innerWidth - 10;
+g_height = window.innerHeight - 10;
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+g_left = 0;
+
+if ( g_width < ( g_origWidth * g_height /g_origHeight ) )
+	g_height = g_width * g_origHeight / g_origWidth;
+else
+	g_width = g_origWidth * g_height / g_origHeight;
+	
+g_top = (window.innerHeight - g_height) / 2;
+g_left = (window.innerWidth - g_width) / 2;
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+function new_font_size() {
+	var size = 11 * g_width / g_origWidth;
+	if ( size < 1 ) size = 1;
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+</script>
+<div id=SlideObj class=sld style='position:relative;font-size:&{new_font_size()};'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 1 * g_height; mywidth = 1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.png" height=' + ht + ' width=' + wd + '>' );
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+</layer><script>
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+</script>
+<div><script language=JavaScript><!--
+xx = 0.01 * g_width;
+yy = 0.34 * g_height;
+ht = 0.61 * g_height;
+wd = 0.97 * g_width;
+document.write(
+'<img border=0 src="slide0008_image076.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = -0.01 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.93 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0.01 * g_width; myheight = 0.06 * g_height; mywidth = 0.91 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:"-358 0 -1";mso-line-spacing:"-358 0 -1"'><span
+style='font-family:Verdana;font-size:64%'>Evaluating candidate genes</span><span
+style='font-family:Verdana;font-size:73%;mso-special-format:lastCR;display:
+none'><i><br>
+</i></span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0.01 * g_width; myheight = 0.22 * g_height; mywidth = 0.34 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.01 * g_width;
+yy = 0.08 * g_height;
+ht = 0.22 * g_height;
+wd = 0.34 * g_width;
+document.write(
+'<img border=0 src="slide0008_image077.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.03 * g_height; myleft = 0.69 * g_width; myheight = 0.17 * g_height; mywidth = 0.33 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.16 * g_height; mywidth = 0.31 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.31 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center'><span style='font-size:200%;color:#E9EB5D'><i>Right
+position<br>
+</i></span></div>
+</layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.1 * g_height; mywidth = 0.31 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.31 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:center'><span style='font-size:200%;color:#E9EB5D'><i>and
+high </i></span></span></layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.31 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:center'><span style='font-size:200%;color:#E9EB5D'><i>correlation</i></span></span></layer></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.17 * g_height; myleft = 0.75 * g_width; myheight = 0.14 * g_height; mywidth = 0.21 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.12 * g_height; mywidth = 0.21 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center'><span style='font-size:267%;color:#E9EB5D'><i><span
+style="mso-spacerun: yes">&nbsp;</span></i></span><span style='font-size:200%;
+color:#E9EB5D'><i>= better<br>
+</i></span></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.21 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center'><span style='font-size:200%;color:#E9EB5D'><i>candidates</i></span></div>
+</layer></div>
+</layer></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face="Times New Roman" size=4><b>Evaluating
+   candidate genes (CHECKED BOXES) responsible for variability in APP
+   expression:</b></font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face="Times New Roman" size=4>A large number
+   of genes are usually in the QTL interval and are therefore POSITIONAL
+   CANDIDATES, but they will differ greatly in their biological and
+   bioinformatic plausibility. Assume that the QTL has been located between 119
+   and 131 Mb (12 Mb). There will typically be 12 to 15 genes per Mb, so we
+   might need to evaluate several hundred positional candidates. In this
+   particular case there are about 100 known genes in this interval. Eight of
+   these are highlighted in the table above with check marks in the boxes to
+   the left.<span style="mso-spacerun: yes">&nbsp; </span>We need to highlight
+   and objectively score the biologically relevant subset of all 100 positional
+   candidate genes. We could look through gene ontologies and expression levels
+   to help us shorten the list. An alternate way available using WebQTL is to
+   generate a list of those genes in this interval that have transcripts that
+   co-vary in expression with App expression. That is what the table shows.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face="Times New Roman" size=4>Notes:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face="Times New Roman" size=4>1. To replicate
+   this table go back to the Trait Data and Analysis Form. Choose to sort
+   correlations by POSITION and select RETURN = 500. Then scroll down the list
+   to Chr 7 and review the subset of positional candidates that share
+   expression with App. You should see a list similar to that shown above.
+   Gtf3c1 is a good biological candidate and has a high covariation in
+   expression with App.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face="Times New Roman" size=4>2. Caveat:<span
+   style="mso-spacerun: yes">&nbsp;&nbsp; </span>Of course, the gene or genes
+   that control App expression may not be in this list. A protein coding
+   difference might be the ultimate cause of variation in App transcript level
+   and the expression covariation might be close to zero. Our list may also
+   simply be missing the right transcript since the microarray is not truly
+   comprehensive. Furthermore, even if the list contains the QTL gene, an
+   expression difference may only have been expressed early in development or
+   even in another tissue such as liver. While it is important to recognize
+   these caveats, it is equally important to devise a rational way to rank
+   candidates given existing data. Coexpression is one of several criteria used
+   to evaluate positional candidates. We will see others in the next slide.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face="Times New Roman" size=4>3. We can also
+   assess the likelihood that candidates contain functional polymorphism in
+   promoters and enhancers that affect their expression simply by mapping the
+   transcripts of all candidate genes to see if they �map back� to the location
+   of gene itself. A transcript that maps to its own location is referred to as
+   a cis QTL. We essentially ask: Which of the transcripts listed in the
+   Correlation Table above (from Gtf3c1 to Zranb1) has variation in expression
+   that maps to Chr 7 at about 120 Mb?<span style="mso-spacerun: yes">&nbsp;
+   </span>The logic of this search is that if a gene controls the level of its
+   own expression it is also much more likely to generate other downstream
+   effects. The Gtf3c1 transcript is a weak cis QTL with a local LRS maximum of
+   about 7.0 (D alleles are high). That is just about sufficient to declare it
+   to be a cis QTL. [No whole genome correction is required and a point-wise
+   p-value of 0.05 is the appropriate test. A p-value of 0.05 is roughly
+   equivalent to an LRS of 6.0 (LOD = 1.3).]</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
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diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0022_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0022_notes_pane.htm
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@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>This is a major output
+  type: a so-called full-genome interval map.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>The X-axis represents all
+  19 autosomes and the X chromosome as if they were laid end to end with short
+  gaps between the telomere of one chromosome and the centromere of the next
+  chromosome (mouse chromosomes only have a single long arm and the centromere
+  represents the origin of each chromosome for numerical purpose: 0
+  centimorgans at almost 0 megabases). The blue labels along the bottom of the
+  figure list a subset of the 3795 markers that were used in mapping.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>The thick blue wavy line
+  running across chromosomes summarizes the strength of association between
+  variation in the phenotype (App expression differences) and the two genotypes
+  of all markers and the intervals between markers (hence, interval mapping).<span
+  style="mso-spacerun: yes">&nbsp; </span>The height of the wave (blue Y-axis
+  to the left) provides the likelihood ratio statistic (LRS). Divide by 4.61 to
+  convert these values to LOD scores.<span style="mso-spacerun: yes">&nbsp;
+  </span>Or you can read them as a chi-square-like statistic.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>The red line and the red
+  axis to the far right provides an estimate of the effect that a QTL has on
+  expression of App (this estimate of the so-called additive effect tends to be
+  too high). If the red line is below the X-axis then this means that the allele
+  inherited from C57BL/6J (B6 or B) at a particular marker is associated with
+  higher values. If the red line is above the X-axis then the DBA/2J allele (D2
+  or D) is associated with higher trait values. Multiply the additive effect
+  size by 2 to estimate the difference between the set of strains that have the
+  B/B genotype and those that have the D/D genotype at a specific marker. For
+  example, on distal Chr 7 the red line peaks at a value of about 0.2. That
+  means that this region of chromosome 2 is responsible for a 0.4 unit
+  expression difference between B/B strains and the D/D strains.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>The yellow histogram bars:
+  These summarize the results of a whole-genome bootstrap of the trait that is
+  performed 1000 times. What is a bootstrap? A bootstrap provides a method to
+  evaluate whether results are robust. If we drop out one strain, do we still
+  get the same results? When mapping quantitative traits, each strain normally
+  gets one equally weighted vote. But using the bootstrap procedure, we give
+  each strain a random weighting factor of between 0 and 1.<span
+  style="mso-spacerun: yes">&nbsp; </span>We then remap the trait and find THE
+  SINGLE BEST LRS VALUE per bootstrap. We do this 1000 times. In this example,
+  most bootstrap results cluster on Chr 3 and Chr 7 under the LRS peaks. That
+  is somewhat reassuring. But notice that a substantial number of bootstrap are
+  scattered around on other chromosomes. About 30% of the bootstrap resamples
+  have a peak on Chr 7. That is pretty good, but does makes us realize that the
+  sample we are working with is still quite small and fragile.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>The horizontal dashed
+  lines at 10.5 and 17.3 are the likelihood ratio statistic (LRS) values
+  associated with the suggestive and significant genome-wide probabilities that
+  were established by permutations of phenotypes across genotypes. We shuffle
+  randomly 2000 times and obtain a distribution of peak LRS scores to generate
+  a null distribution. Five percent of the time, one of these permuted data
+  sets will have a peak LRS higher than 17.3. We call that level the 0.05
+  significance threshold for a whole genome scan. The p = 0.67 point is the the
+  suggestive level, and corresponds to the green dashed line.<span
+  style="mso-spacerun: yes">&nbsp; </span>These thresholds are conservative for
+  transcripts that have expression variation that is highly heritable. The
+  putative or suggestive QTL on Chr 3 is probably more than just suggestive.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>One other point: the
+  mapping procedure we use is computationally very fast, but it is relatively
+  simple. We are not looking for gene-gene interactions and we are not fitting
+  multiple QTLs in combinations. Consider this QTL analysis a first pass that
+  will highlight hot spots and warm spots that are worth following up on using
+  more sophisticated models.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>CLICKABLE REGIONS:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>1. If you click on the
+  Chromosome number then you will generate a new map just for that chromosome.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>2. If you click on the
+  body of the map, say on the blue line, then you will generate a view on a 10
+  Mb window of that part of the genome from the UCSC Genome Browser web site.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>3. If you click on a
+  marker symbol, then you will generate a new Trait data and Analysis window
+  with the genotypes loaded into the window just like any other trait. More on
+  this in Section 3.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>4. You can drag these maps
+  off of the browser window and onto your desktop. They will be saved as PNG or
+  PDF files. You can import them into Photoshop or other programs.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>5. There is also an option
+  at the bottom of the page to download a 2X higher resolution image of this
+  plot for papers and presentations.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>6. You can also download
+  the results of the analysis in a text format</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0023.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0023.htm
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+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
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+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
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+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>An even higher blow-up of
+   part of the Chr 7 physical map of variation in App expression in brain.<span
+   style="mso-spacerun: yes">&nbsp; </span>The QTL region actually extends from
+   about 119 to 129.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face="Times New Roman" size=4>Notes:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face="Times New Roman" size=4>1. As mentioned
+   in the previous slide another important approach to ranking candidates is
+   based on the number of sequence variants that distinguish the parental
+   strains. If we were sure that the sequences of the gene, its promoter, and
+   its enhancers were identical between the strains then we could discount--but
+   not eliminate--that gene as a candidate. The Gtf3c1 candidate almost falls
+   into this category: of 663 known SNPs in and around this gene, only four
+   differ between C57BL/6J and DBA/2J. Gtf3c1 is essentially
+   identical-by-descent in these strains and is a less likely candidate. In
+   contrast, if the two alleles of the gene have dozens of functional variants
+   in exons, promoters, enhancers, and splice sites, then it becomes a higher
+   priority candidate.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face="Times New Roman" size=4>Of course it
+   only takes a single critical sequence variant to generate downstream
+   effects. The argument above is really about the prior probabilities. Where
+   would you place your bets given the information at hand?</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>2.<span
+   style="mso-spacerun: yes">&nbsp; </span>If you scroll down the INTERVAL
+   ANALYST you will find that Ctbp2 is a particularly interesting candidate
+   that contains lots of SNPs (n = 75 and a SNP density of 0.55 SNP/Kb). Ctbp2
+   is also closer to our QTL peak than was Gtf3c1. Not only does Ctbp2 contain
+   lots of SNPs but it is also is associated with a powerful cis QTL with an
+   LRS of 24.2 (divide by 4.61 to get the equivalent LOD score of 5.25).</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>3.<span
+   style="mso-spacerun: yes">&nbsp; </span>At this high magnification,
+   individual genes are distinct. They are color coded by their density of
+   SNPs. Bright orange represents those genes that have a high SNP density
+   (C57BL/6J versus DBA/2J), black represents genes with low SNP density. Roll
+   the cursor over a gene block and its name will pop up, along with
+   information on exon number.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>4.<span
+   style="mso-spacerun: yes">&nbsp; </span>Beneath the physical map you will
+   find an INTERVAL ANALYST table that lists information on known genes in the
+   region on which you have zoomed the Physical Map.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>5.<span
+   style="mso-spacerun: yes">&nbsp; </span>As always: error-checking is
+   important. Some genes may be missing from the Interval Analyst (recent
+   additions or errors of omission). In this case the Zranb1 gene that is
+   located just proximal to Ctbp2 is not listed in the INTERVAL ANALYST.
+   Double-check the interval using the Genome Browser links (blue and beige
+   horizontal bars) at the top of the PHYSICAL MAP.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0023_image107.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0023_image107.png
new file mode 100755
index 00000000..0e63f836
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0023_image107.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0023_image108.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0023_image108.png
new file mode 100755
index 00000000..3c44c2ab
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0023_image108.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0023_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0023_notes_pane.htm
new file mode 100755
index 00000000..010f3332
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0023_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>The map on the top has an
+  X-axis scale based on frequency of recombinations events between markers (B
+  to D transitions, see slide 19 for a color-coded example). These so-called
+  genetic maps are scaled in centimorgan (recombinations per 100 gametes). In contrast,
+  the physical map shown below the genetic map has an X-axis scale based on DNA
+  length measured in nucleotides or base-pairs. Notice the large difference
+  between the two maps in the size of Chr 19 (large on the genetic scale but
+  small on the physical scale).</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Also notice the large
+  difference in the width of the chromosome 7 QTL peak. In mice, recombinations
+  occur with higher frequency toward the telomeric side (righ sidet) of each
+  chromosome. As a result, genetic maps are stretched out more toward the
+  telomere relative to a physical map. The QTL on distal Chr 7 is therefore
+  actually more precisely mapped than might appear looking at the genetic map.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>The physical scale is
+  becoming more useful than the genetic scale primarily because many other data
+  types can be easily superimposed on a physical map. You will see more
+  examples in the next several slides.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0024.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0024.htm
new file mode 100755
index 00000000..bf2b9b3c
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0024.htm
@@ -0,0 +1,167 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Aug-15-05: Evaluating Ctbp2 as a candidate QTL for App">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
+		min = window.innerHeight/20;
+		
+	return min+"pt";
+}
+var SoundEnabled = navigator.plugins && navigator.plugins["LiveAudio"];
+function restore() {
+	self.location.reload();
+}
+function set_size() {
+	document.SlideLayer.width = window.innerWidth;
+	document.SlideLayer.height = window.innerHeight;
+}
+document.captureEvents(Event.MOUSEDOWN);
+document.captureEvents(Event.KEYPRESS);
+document.onkeypress = _KPH ;
+document.onmousedown = _KPH ;
+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0024.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
+bgcolor="#000000">
+<script>
+
+g_origHeight = 566;
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+
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+	g_height = g_width * g_origHeight / g_origWidth;
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+	g_width = g_origWidth * g_height / g_origHeight;
+	
+g_top = (window.innerHeight - g_height) / 2;
+g_left = (window.innerWidth - g_width) / 2;
+
+document.write( '<layer id=SlideLayer BGCOLOR=#484848 background="" top=' + g_top + ' left=' + g_left + ' height=' + g_height + ' width=' + g_width + ' >' );
+document.SlideLayer.clip.top = 0;
+document.SlideLayer.clip.left = 0;
+document.SlideLayer.clip.height = g_height;
+document.SlideLayer.clip.width = g_width;
+function new_font_size() {
+	var size = 11 * g_width / g_origWidth;
+	if ( size < 1 ) size = 1;
+	return size+"pt";
+}
+</script>
+<div id=SlideObj class=sld style='position:relative;font-size:&{new_font_size()};'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 1 * g_height; mywidth = 1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.png" height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 1.06 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 1.05 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:"-358 0 -1";mso-margin-left-alt:233;
+mso-text-indent-alt:0;mso-line-spacing:"-358 0 -1";mso-margin-left-alt:233;
+mso-text-indent-alt:0'><span style='font-family:Verdana;font-size:64%'>Evaluating
+</span><span style='font-family:Verdana;font-size:64%'><i>Ctbp2</i></span><span
+style='font-family:Verdana;font-size:64%'> as a candidate QTL for </span><span
+style='font-family:Verdana;font-size:64%'><i>App</i></span><span
+style='font-family:Verdana;font-size:73%;mso-special-format:lastCR;display:
+none'><i><br>
+</i></span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.94 * g_height; myleft = 0.03 * g_width; myheight = 0.04 * g_height; mywidth = 0.96 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.03 * g_width;
+yy = 0.94 * g_height;
+ht = 0.04 * g_height;
+wd = 0.96 * g_width;
+document.write(
+'<img border=0 src="slide0010_image082.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0.03 * g_width; myheight = 0.4 * g_height; mywidth = 0.48 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.03 * g_width;
+yy = 0.07 * g_height;
+ht = 0.4 * g_height;
+wd = 0.48 * g_width;
+document.write(
+'<img border=0 src="slide0010_image083.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.52 * g_height; myleft = 0.55 * g_width; myheight = 0.37 * g_height; mywidth = 0.35 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.33 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'>This is</span><span
+style='font-size:233%;color:#E9EB5D'><i> the </i></span></span></layer><script>
+	mytop = 0.06 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.34 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'><i>Ctbp2 </i></span><span
+style='font-size:233%;color:#E9EB5D'>cis QTL, </span></span></layer><script>
+	mytop = 0.12 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.35 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'>but is
+detected </span></span></layer><script>
+	mytop = 0.18 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.33 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'>only in the </span></span></layer><script>
+	mytop = 0.25 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.35 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'>Rosen
+striatum </span></span></layer><script>
+	mytop = 0.31 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.33 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'>data set.</span><span
+style='font-size:233%;color:#E9EB5D;mso-special-format:lastCR;display:none'><i><br>
+</i></span></span></layer></div>
+</layer><script>
+	mytop = 0.16 * g_height; myleft = 0.56 * g_width; myheight = 0.12 * g_height; mywidth = 0.48 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.45 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'>This is</span><span
+style='font-size:233%;color:#E9EB5D'><i> the App QTL </i></span></span></layer><script>
+	mytop = 0.06 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.48 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'>in the INIA
+data set. </span><span style='font-size:233%;color:#E9EB5D;mso-special-format:
+lastCR;display:none'><i><br>
+</i></span></span></layer></div>
+</layer><script>
+	mytop = 0.39 * g_height; myleft = 0.03 * g_width; myheight = 0.53 * g_height; mywidth = 0.48 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.03 * g_width;
+yy = 0.39 * g_height;
+ht = 0.53 * g_height;
+wd = 0.48 * g_width;
+document.write(
+'<img border=0 src="slide0010_image084.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.1 * g_height; myleft = 0.35 * g_width; myheight = 0.72 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.35 * g_width;
+yy = 0.1 * g_height;
+ht = 0.72 * g_height;
+wd = 0 * g_width;
+document.write(
+'<img border=0 src="slide0010_image085.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.1 * g_height; myleft = 0.31 * g_width; myheight = 0.72 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.31 * g_width;
+yy = 0.1 * g_height;
+ht = 0.72 * g_height;
+wd = 0 * g_width;
+document.write(
+'<img border=0 src="slide0010_image086.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>This slide illustrates
+   one reason why Ctbp2 should be considered a high priority positional
+   candidate gene that may modulate the expression level of App.<span
+   style="mso-spacerun: yes">&nbsp; </span>Ctbp2 is a strong cis QTL in some
+   brain regions (here the data are taken from the striatum).<span
+   style="mso-spacerun: yes">&nbsp; </span>If Ctbp2 contains variants that
+   modulate its own expression then these expression differences may produce
+   many downstream effects. Of course, we now want to know much more about the
+   known biology of Ctbp2. What kind of gene is it? To begin to answer that
+   question we can use a number of resources listed in the LINKS page.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Notes:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Arial size=3>1.</font><font
+   face=Verdana size=3> The App QTL is bimodal. Perhaps there are actually two
+   causal factors in this region--one close to 123 Mb and the other close to
+   127 Mb.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>2. The precision of QTL
+   mapping depends on several factors, including the effect size and
+   interactions among QTLs modulating a trait, the number of genetic
+   individuals that are studied, and the distribution of recombinations in the
+   study population.<span style="mso-spacerun: yes">&nbsp; </span>In the case
+   above, the QTL(s) are likely to be confined to the interval from 120 to 132
+   Mb. The bootstrap test (yellow bars shown in some of the previous slides)
+   can be usual for estimating the consistency of QTL peaks.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0024_image109.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0024_image109.png
new file mode 100755
index 00000000..c0174c3f
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0024_image109.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0024_image111.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0024_image111.png
new file mode 100755
index 00000000..9a3e3264
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0024_image111.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0024_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0024_notes_pane.htm
new file mode 100755
index 00000000..e6f07dec
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0024_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Physical map of variation
+  in App expression in brain on distal Chr 7 (a blow up of the whole-genome map
+  on the previous slide).</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Arial size=2>1.</font><font face=Verdana
+  size=2> You can now see that the X-axis is on a physical scale of megabases
+  (Mb). The QTL peak is roughly between 120 and 132 Mb.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>2. The small irregular
+  colored blocks and marks toward the top of the map mark the locations of
+  genes superimposed on the physical map. Neighboring genes are offset slightly
+  in the vertical axis for display purpose. Note one region of very high gene
+  density from about 120 to 123 Mb.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>3. The orange hash marks
+  along the X-axis represent the number of single nucleotide polymorphisms that
+  distinguish the two parental strains (C57BL/6J and DBA/2J) from each other.
+  We call this the SNP seismograph track (see Glossary for more details). Regions
+  with low numbers of SNP have closely matched sequences and are less likely to
+  contain QTLs.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>4. As before, the thin red
+  line shows the additive effect size. By convention the positive values
+  signify the D alleles are associated with higher expression of App in this
+  region of Chr 7 than the B alleles. The maximum effect size is about +0.20
+  log2 expression units per D allele. The differences been the BB and DD
+  genotypes (BB and DD because each strain has two alleles; one per chromosome)
+  is therefore about 2^0.4 = 1.32; or a 32% increment in DD relative to BB at
+  this locus.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>5. If you scroll just
+  under the Physical Map you will see text that reads �DISPLAY from XXX Mb TO
+  YYY Mb�..�<span style="mso-spacerun: yes">&nbsp; </span>These physical maps
+  are zoomable, a feature we will exploit to evaluate candidate genes in this
+  QTL interval.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0025.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0025.htm
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+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
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+</script>
+<meta name=Description
+content="Aug-15-05: Evaluating Ctbp2 using other resources">
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+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.png" height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.08 * g_height; mywidth = 1.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.98 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:"-358 0 -1";mso-margin-left-alt:233;
+mso-text-indent-alt:0;mso-line-spacing:"-358 0 -1";mso-margin-left-alt:233;
+mso-text-indent-alt:0'><span style='font-family:Verdana;font-size:64%'>Evaluating
+</span><span style='font-family:Verdana;font-size:64%'><i>Ctbp2</i></span><span
+style='font-family:Verdana;font-size:64%'> using other resources</span><span
+style='font-family:Verdana;font-size:73%;mso-special-format:lastCR;display:
+none'><i><br>
+</i></span></div>
+</layer></div>
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+//-->
+</script></div>
+</layer><script>
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+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Ctbp2 should also be
+   considered a high priority biological candidate gene responsible for
+   modulating App expression levels. The C-terminal binding protein 2 is a
+   transcriptional co-repressor also known as Ribeye.</font><font
+   face=Times-Roman size=3> The gene produces two transcripts encoding distinct
+   proteins. The short form is a transcriptional repressor that binds a
+   Pro-X-Asp-Leu-Ser peptide motif and interacts with several transcription
+   factors including EVI1, ZFPM1, and ZFHX1A (aka TCF8, deltaEF1). The longer
+   isoform is a major component of specialized synapses in photoreceptors. Both
+   proteins contain a NAD+ binding domain similar to NAD+-dependent
+   2-hydroxyacid dehydrogenases.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Notes:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>1. To find out more about
+   CTBP2 protein and the Ctbp2 gene, link to iHOP at
+   http://www.pdg.cnb.uam.es/UniPub/iHOP/ and type in CTBP2</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Try Arrowsmith at
+   http://arrowsmith.psych.uic.edu/cgi-test/arrowsmith_uic/pubsmith.cgi</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>2. Both APP and CTBP2 are
+   involved in oxidoreducatase activity or Notch signaling. To establish this
+   common gene ontology visit NCBI<span style="mso-spacerun: yes">&nbsp;
+   </span>http://www.ncbi.nih.gov/entrez/query.fcgi?db=gene and enter each gene
+   symbol.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>3. You can get
+   interesting hints regarding Ctbp2 expression partners by examining the
+   genetic correlations between Ctbp2 probe set 1422887_a_at and all other
+   transcripts on the M430 Affymetrix array. Use the Striatum data set because
+   we already know from previous work (the previous slide) that this gene is a
+   cis QTL.<span style="mso-spacerun: yes">&nbsp; </span>You should be able to
+   show that Ctbp2 and Notch3 have antagonistic expression patterns in
+   striatum. The negative genetic correlation with E2f4 is even stronger. The
+   transcript also has a high positive genetic correlation with Rdh14. Of
+   particular interest with respect to APP protein processing, Ctbp2 covaries
+   positively with Bace2 (the transcript of the beta site APP-cleaving enzyme
+   2).</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0025_image112.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0025_image112.png
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diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0025_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0025_notes_pane.htm
new file mode 100755
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+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0025_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face="Times New Roman" size=4><b>Evaluating
+  candidate genes (CHECKED BOXES) responsible for variability in APP
+  expression:</b></font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face="Times New Roman" size=4>A large number
+  of genes are usually in the QTL interval and are therefore POSITIONAL
+  CANDIDATES, but they will differ greatly in their biological and
+  bioinformatic plausibility. Assume that the QTL has been located between 119
+  and 131 Mb (12 Mb). There will typically be 12 to 15 genes per Mb, so we
+  might need to evaluate several hundred positional candidates. In this
+  particular case there are about 100 known genes in this interval. Eight of
+  these are highlighted in the table above with check marks in the boxes to the
+  left.<span style="mso-spacerun: yes">&nbsp; </span>We need to highlight and
+  objectively score the biologically relevant subset of all 100 positional
+  candidate genes. We could look through gene ontologies and expression levels
+  to help us shorten the list. An alternate way available using WebQTL is to
+  generate a list of those genes in this interval that have transcripts that
+  co-vary in expression with App expression. That is what the table shows.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face="Times New Roman" size=4>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face="Times New Roman" size=4>1. To replicate
+  this table go back to the Trait Data and Analysis Form. Choose to sort
+  correlations by POSITION and select RETURN = 500. Then scroll down the list
+  to Chr 7 and review the subset of positional candidates that share expression
+  with App. You should see a list similar to that shown above. Gtf3c1 is a good
+  biological candidate and has a high covariation in expression with App.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face="Times New Roman" size=4>2. Caveat:<span
+  style="mso-spacerun: yes">&nbsp;&nbsp; </span>Of course, the gene or genes
+  that control App expression may not be in this list. A protein coding
+  difference might be the ultimate cause of variation in App transcript level
+  and the expression covariation might be close to zero. Our list may also
+  simply be missing the right transcript since the microarray is not truly
+  comprehensive. Furthermore, even if the list contains the QT gene, an
+  expression difference may only have been expressed early in development or
+  even in another tissue such as liver. While it is important to recognize
+  these caveats, it is equally important to devise a rational way to rank
+  candidates given existing data. Coexpression is one of several criteria used
+  to evaluate positional candidates. We will see others in the next slide.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face="Times New Roman" size=4>3. We can also
+  assess the likelihood that candidates contain functional polymorphism in
+  promoters and enhancers that affect their expression simply by mapping the
+  transcripts of all candidate genes to see if they �map back� to the location
+  of gene itself. A transcript that maps to its own location is referred to as
+  a cis QTL. We essentially ask: Which of the the transcripts listed in the
+  Correlation Table above (from Gtf3c1 to Zranb1) has variation in expression
+  that maps to Chr 7 at about 120 Mb?<span style="mso-spacerun: yes">&nbsp;
+  </span>The logic of this search is that if a gene controls the level of its
+  own expression it is also much more likely to generate other downstream
+  effects. The Gtf3c1 transcript is a weak cis QTL with a local LRS maximum of
+  about 7.0 (D alleles are high). That is just about sufficient to declare it
+  to be a cis QTL. [No whole genome correction is required and a point-wise
+  p-value of 0.05 is the appropriate test. A p-value of 0.05 is roughly
+  equivalent to an LRS of 6.0 (LOD = 1.3).]</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0026.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0026.htm
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+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
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+<div style='mso-special-format:nobullet;text-align:left;font-family:"Gill Sans";
+font-weight:normal;font-style:normal;text-decoration:none;text-shadow:none;
+text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;
+font-size:213%;mso-text-raise:0%;mso-line-spacing:"-220 0 -216";mso-margin-left-alt:
+292;mso-text-indent-alt:0;mso-line-spacing:"-220 0 -216";mso-margin-left-alt:
+292;mso-text-indent-alt:0'><span style='mso-special-format:nobullet;display:
+none;color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>Summary of Part 2</span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.15 * g_height; myleft = 0.05 * g_width; myheight = 0.31 * g_height; mywidth = 1.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div>
+<layer>
+ <div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+ normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+ no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+ mso-text-raise:0%'></div>
+</layer>
+<layer>
+ <div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+ normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+ no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+ mso-text-raise:0%'></div>
+</layer>
+<layer>
+ <div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+ normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+ no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+ mso-text-raise:0%'></div>
+</layer>
+<layer>
+ <div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+ normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+ no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+ mso-text-raise:0%'></div>
+</layer>
+<script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.87 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:numbullet;font-family:Arial;text-align:left;
+font-family:Verdana;font-weight:normal;font-style:normal;text-decoration:none;
+text-shadow:none;text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;
+color:black;mso-color-index:1;font-size:80%;mso-text-raise:0%;mso-margin-left-alt:
+144;mso-margin-left-alt:144'><script>
+	mytop = 0 * g_height; myleft = 0.02 * g_width; myheight = 0.04 * g_height; mywidth = 0.84 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:167%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:numbullet;
+position:absolute;left:-2.96%;font-family:Arial'>1.</span></span><span
+style='font-family:"Gill Sans";font-size:167%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>Covered the basics of QTL
+analysis and mapping.<br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.04 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.87 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:numbullet;font-family:Arial;text-align:left;
+font-family:Verdana;font-weight:normal;font-style:normal;text-decoration:none;
+text-shadow:none;text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;
+color:black;mso-color-index:1;font-size:80%;mso-text-raise:0%;mso-margin-left-alt:
+144;mso-margin-left-alt:144'><script>
+	mytop = 0 * g_height; myleft = 0.02 * g_width; myheight = 0.04 * g_height; mywidth = 0.84 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:167%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:numbullet;
+position:absolute;left:-2.96%;font-family:Arial'>2.</span></span><span
+style='font-family:"Gill Sans";font-size:167%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>Reviewed difference between
+genetic and physical maps.<br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0 * g_width; myheight = 0.13 * g_height; mywidth = 1.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:numbullet;font-family:Arial;text-align:left;
+font-family:Verdana;font-weight:normal;font-style:normal;text-decoration:none;
+text-shadow:none;text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;
+color:black;mso-color-index:1;font-size:80%;mso-text-raise:0%;mso-margin-left-alt:
+144;mso-margin-left-alt:144'><script>
+	mytop = 0 * g_height; myleft = 0.02 * g_width; myheight = 0.04 * g_height; mywidth = 0.98 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:167%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:numbullet;
+position:absolute;left:-2.55%;font-family:Arial'>3.</span></span><span
+style='font-family:"Gill Sans";font-size:167%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>Discussed interpreting features
+of QTL maps including the LRS function, </span></span></layer><script>
+	mytop = 0.04 * g_height; myleft = 0.02 * g_width; myheight = 0.04 * g_height; mywidth = 0.92 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:167%;
+color:#E9EB5D;mso-color-index:3'>the additive effect function, the bootstrap
+bars, and the permutation </span></span></layer><script>
+	mytop = 0.09 * g_height; myleft = 0.02 * g_width; myheight = 0.04 * g_height; mywidth = 0.84 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:167%;
+color:#E9EB5D;mso-color-index:3'>thresholds.<br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.22 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.89 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:numbullet;font-family:Arial;text-align:left;
+font-family:Verdana;font-weight:normal;font-style:normal;text-decoration:none;
+text-shadow:none;text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;
+color:black;mso-color-index:1;font-size:80%;mso-text-raise:0%;mso-margin-left-alt:
+144;mso-margin-left-alt:144'><script>
+	mytop = 0 * g_height; myleft = 0.02 * g_width; myheight = 0.04 * g_height; mywidth = 0.86 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:167%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:numbullet;
+position:absolute;left:-2.89%;font-family:Arial'>4.</span></span><span
+style='font-family:"Gill Sans";font-size:167%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>Illustrated techniques to
+generate a list of positional candidates.<br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.26 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.87 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:numbullet;font-family:Arial;text-align:left;
+font-family:Verdana;font-weight:normal;font-style:normal;text-decoration:none;
+text-shadow:none;text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;
+color:black;mso-color-index:1;font-size:80%;mso-text-raise:0%;mso-margin-left-alt:
+144;mso-margin-left-alt:144'><script>
+	mytop = 0 * g_height; myleft = 0.02 * g_width; myheight = 0.04 * g_height; mywidth = 0.84 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:167%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:numbullet;
+position:absolute;left:-2.96%;font-family:Arial'>5.</span></span><span
+style='font-family:"Gill Sans";font-size:167%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>Discussed some factors used to
+evaluate candidate genes.</span></span></layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.58 * g_height; myleft = 0.05 * g_width; myheight = 0.22 * g_height; mywidth = 1.06 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.89 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:167%;
+color:#E9EB5D;mso-color-index:3'>What does a QTL signify? A good QTL is a claim
+that a particular </span></span></layer><script>
+	mytop = 0.04 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 1.02 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:167%;
+color:#E9EB5D;mso-color-index:3'>chromosomal region contains a causal source of
+variation in the phenotype. </span></span></layer><script>
+	mytop = 0.08 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 1.06 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:167%;
+color:#E9EB5D;mso-color-index:3'>The importance of this hypothesis depends on
+the quality and relevance of the </span></span></layer><script>
+	mytop = 0.13 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.96 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:167%;
+color:#E9EB5D;mso-color-index:3'>phenotype and the statistical strength of the
+QTL. As usual, test and be </span></span></layer><script>
+	mytop = 0.17 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.89 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:167%;
+color:#E9EB5D;mso-color-index:3'>skeptical.</span></span></layer></div>
+</layer></div>
+</LAYER>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0026_image114.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0026_image114.png
new file mode 100755
index 00000000..93d21c90
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+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0026_image114.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0026_image115.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0026_image115.png
new file mode 100755
index 00000000..fdc27d23
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0026_image115.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0026_image116.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0026_image116.png
new file mode 100755
index 00000000..d2cb5ee3
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0026_image116.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0026_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0026_notes_pane.htm
new file mode 100755
index 00000000..d335b732
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0026_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Even higher blow-up of
+  part of the Chr 7 physical map of variation in App expression in brain.<span
+  style="mso-spacerun: yes">&nbsp; </span>The QTL region actually extends from
+  about 119 to 129.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face="Times New Roman" size=4>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face="Times New Roman" size=4>1. As mentioned
+  in the previous slide another important approach to ranking candidates is
+  based on the number of sequence variants that distinguish the parental
+  strains. If we were sure that the sequences of the gene, its promoter, and
+  its enhancers were identical between the strains then we could discount--but
+  not eliminate--that gene as a candidate. The Gtf3c1 candidate almost falls
+  into this category: of 663 known SNPs in and around this gene, only four
+  differ between C57BL/6J and DBA/2J. Gtf3c1 is essentially
+  identical-by-descent in these strains and is a less likely candidate. In
+  contrast, if the two alleles of the gene have dozens of functional variants
+  in exons, promoters, enhancers, and splice sites, then it becomes a higher
+  priority candidate.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face="Times New Roman" size=4>Of course it
+  only takes a single critical sequence variant to generate downstream effects.
+  The argument above is really about the prior probabilities. Where would you
+  place your bets given the information at hand?</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>2.<span
+  style="mso-spacerun: yes">&nbsp; </span>If you scroll down the INTERVAL
+  ANALYST you will find that Ctbp2 is a particularly interesting candidate that
+  contains lots of SNPs (n = 75 and a SNP density of 0.55 SNP/Kb). Ctbp2 is
+  also closer to our QTL peak than was Gtf3c1. Not only does Ctbp2 contain lots
+  of SNPs but it is also is associated with a powerful cis QTL with an LRS of
+  24.2 (divide by 4.61 to get the equivalent LOD score of 5.25).</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>3.<span
+  style="mso-spacerun: yes">&nbsp; </span>At this high magnification,
+  individual genes are distinct. They are color coded by their density of SNPs.
+  Bright orange represents those genes that have a high SNP density (C57BL/6J
+  versus DBA/2J), black represents genes with low SNP density. Roll the cursor
+  over a gene block and its name will pop up, along with information on exon
+  number.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>4.<span
+  style="mso-spacerun: yes">&nbsp; </span>Beneath the physical map you will
+  find an INTERVAL ANALYST table that lists information on known genes in the
+  region on which you have zoomed the Physical Map.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>5.<span
+  style="mso-spacerun: yes">&nbsp; </span>As always: error-checking is
+  important. Some genes may be missing from the Interval Analyst (recent
+  additions or errors of omission). In this case the Zranb1 gene that is
+  located just proximal to Ctbp2 is not listed in the INTERVAL ANALYST.
+  Double-check the interval using the Genome Browser links (blue and beige
+  horizontal bars) at the top of the PHYSICAL MAP.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0027.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0027.htm
new file mode 100755
index 00000000..c553bae9
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0027.htm
@@ -0,0 +1,115 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content="Aug-15-05: Test Questions">
+<style media=print>
+<!--.sld
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+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
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+	document.SlideLayer.height = window.innerHeight;
+}
+document.captureEvents(Event.MOUSEDOWN);
+document.captureEvents(Event.KEYPRESS);
+document.onkeypress = _KPH ;
+document.onmousedown = _KPH ;
+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0027.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
+bgcolor="#000000">
+<script>
+
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+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.png" height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.98 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:"-358 0 -1";mso-margin-left-alt:233;
+mso-text-indent-alt:0;mso-line-spacing:"-358 0 -1";mso-margin-left-alt:233;
+mso-text-indent-alt:0'><span style='font-family:Verdana;font-size:64%'>Test
+Questions</span><span style='font-family:Verdana;font-size:73%;mso-special-format:
+lastCR;display:none'><i><br>
+</i></span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.11 * g_height; myleft = 0.04 * g_width; myheight = 0.06 * g_height; mywidth = 1.08 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><span style='font-size:233%;color:#E9EB5D'>1. Evaluate
+candidates for the Chr 3 </span><span style='font-size:233%;color:#E9EB5D'><i>App</i></span><span
+style='font-size:233%;color:#E9EB5D'> QTL.</span><span style='font-size:233%;
+color:#E9EB5D;mso-special-format:lastCR;display:none'><i><br>
+</i></span></div>
+</layer><script>
+	mytop = 0.24 * g_height; myleft = 0.04 * g_width; myheight = 0.12 * g_height; mywidth = 1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'>2. Do </span><span
+style='font-size:233%;color:#E9EB5D'><i>App</i></span><span style='font-size:
+233%;color:#E9EB5D'> and </span><span style='font-size:233%;color:#E9EB5D'><i>Ctbp2</i></span><span
+style='font-size:233%;color:#E9EB5D'> expression share any </span></span></layer><script>
+	mytop = 0.06 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.94 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'>other QTLs
+beside that on Chr 7?</span><span style='font-size:233%;color:#E9EB5D;
+mso-special-format:lastCR;display:none'><i><br>
+</i></span></span></layer></div>
+</layer><script>
+	mytop = 0.43 * g_height; myleft = 0.04 * g_width; myheight = 0.19 * g_height; mywidth = 1.02 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 1.02 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'>3. Can you
+exploit literature mining tools to </span></span></layer><script>
+	mytop = 0.06 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 1.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'>find a
+strong relationship between </span><span style='font-size:233%;color:#E9EB5D'><i>App</i></span><span
+style='font-size:233%;color:#E9EB5D'> and </span></span></layer><script>
+	mytop = 0.12 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.94 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'><i>Ctbp2</i></span><span
+style='font-size:233%;color:#E9EB5D'>? </span><span style='font-size:233%;
+color:#E9EB5D;mso-special-format:lastCR;display:none'><i><br>
+</i></span></span></layer></div>
+</layer><script>
+	mytop = 0.69 * g_height; myleft = 0.04 * g_width; myheight = 0.12 * g_height; mywidth = 1.1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 1.1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'>4. Why might
+the cis QTL for </span><span style='font-size:233%;color:#E9EB5D'><i>Ctbp2</i></span><span
+style='font-size:233%;color:#E9EB5D'> expression </span></span></layer><script>
+	mytop = 0.06 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.98 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'>only be
+detected in the striatum data set?</span><span style='font-size:233%;
+color:#E9EB5D;mso-special-format:lastCR;display:none'><i><br>
+</i></span></span></layer></div>
+</layer></div>
+</LAYER>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0027_image118.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0027_image118.png
new file mode 100755
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diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0027_image119.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0027_image119.png
new file mode 100755
index 00000000..a5886d21
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+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0027_image119.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0027_image120.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0027_image120.png
new file mode 100755
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+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0027_image120.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0027_image121.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0027_image121.png
new file mode 100755
index 00000000..99f4d04d
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diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0027_image122.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0027_image122.png
new file mode 100755
index 00000000..ac87ce02
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0027_image122.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0027_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0027_notes_pane.htm
new file mode 100755
index 00000000..26d15c0e
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0027_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>This slide illustrates one
+  reason why Ctbp2 should be considered a high priority positional candidate
+  gene that may modulate the expression level of App.<span style="mso-spacerun:
+  yes">&nbsp; </span>Ctbp2 is a strong cis QTL in some brain regions (here the
+  data are taken from the striatum).<span style="mso-spacerun: yes">&nbsp;
+  </span>If Ctbp2 contains variants that modulate its own expression then these
+  expression differencess may produce many downstream effects. Of course, we
+  now want to know much more about the known biology of Ctbp2. What kind of
+  gene is it? To begin to answer that question we can use a number of resources
+  listed in the LINKS page.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Arial size=2>1.</font><font face=Verdana
+  size=2> The App QTL is bimodal. Perhaps there are actually two causal factors
+  in this region--one close to 123 Mb and the other close to 127 Mb.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>2. The precision of QTL
+  mapping depends on several factors, including the effect size and
+  interactions among QTLs modulating a trait, the number of genetic individuals
+  that are studied, and the distribution of recombinations in the study
+  population.<span style="mso-spacerun: yes">&nbsp; </span>In the case above,
+  the QTL(s) are likely to be confined to the interval from 120 to 132 Mb. The
+  bootstrap test (yellow bars shown in some of the previous slides) can be
+  usual for estimating the consiistency of QTL peaks.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0028.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0028.htm
new file mode 100755
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--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0028.htm
@@ -0,0 +1,112 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Aug-15-05: Contact for comments and improvements:">
+<style media=print>
+<!--.sld
+	{left:0px !important;
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+	height:4.5in !important;
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+-->
+</style>
+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
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+}
+var SoundEnabled = navigator.plugins && navigator.plugins["LiveAudio"];
+function restore() {
+	self.location.reload();
+}
+function set_size() {
+	document.SlideLayer.width = window.innerWidth;
+	document.SlideLayer.height = window.innerHeight;
+}
+document.captureEvents(Event.MOUSEDOWN);
+document.captureEvents(Event.KEYPRESS);
+document.onkeypress = _KPH ;
+document.onmousedown = _KPH ;
+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0028.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
+bgcolor="#000000">
+<script>
+
+g_origHeight = 566;
+g_origWidth = 755;
+g_width = window.innerWidth - 10;
+g_height = window.innerHeight - 10;
+
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+g_left = 0;
+
+if ( g_width < ( g_origWidth * g_height /g_origHeight ) )
+	g_height = g_width * g_origHeight / g_origWidth;
+else
+	g_width = g_origWidth * g_height / g_origHeight;
+	
+g_top = (window.innerHeight - g_height) / 2;
+g_left = (window.innerWidth - g_width) / 2;
+
+document.write( '<layer id=SlideLayer BGCOLOR=#484848 background="" top=' + g_top + ' left=' + g_left + ' height=' + g_height + ' width=' + g_width + ' >' );
+document.SlideLayer.clip.top = 0;
+document.SlideLayer.clip.left = 0;
+document.SlideLayer.clip.height = g_height;
+document.SlideLayer.clip.width = g_width;
+function new_font_size() {
+	var size = 11 * g_width / g_origWidth;
+	if ( size < 1 ) size = 1;
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+}
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+<div id=SlideObj class=sld style='position:relative;font-size:&{new_font_size()};'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 1 * g_height; mywidth = 1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.png" height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.02 * g_height; myleft = 0.02 * g_width; myheight = 0.09 * g_height; mywidth = 0.94 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0.01 * g_width; myheight = 0.06 * g_height; mywidth = 0.92 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:"-358 0 -1";mso-line-spacing:"-358 0 -1"'><span
+style='font-size:73%'><i>Contact for comments and improvements:</i></span><span
+style='font-size:82%;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.16 * g_height; myleft = 0.06 * g_width; myheight = 0.24 * g_height; mywidth = 0.9 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.24 * g_height; mywidth = 0.87 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:"-358 0 -1";mso-line-spacing:"-358 0 -1"'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.87 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:82%'>rwilliam@nb.utmem.edu<br>
+</span></span></layer><script>
+	mytop = 0.08 * g_height; myleft = 0.04 * g_width; myheight = 0.07 * g_height; mywidth = 0.83 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:82%'><br>
+</span></span></layer><script>
+	mytop = 0.16 * g_height; myleft = 0.04 * g_width; myheight = 0.07 * g_height; mywidth = 0.83 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:82%;mso-special-format:lastCR;
+display:none'><br>
+</span></span></layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.27 * g_height; myleft = 0.09 * g_width; myheight = 0.07 * g_height; mywidth = 0.5 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><span style='font-family:"Gill Sans";font-size:300%;
+color:#E9EB5D'>kmanly@utmem.edu</span></div>
+</layer><script>
+	mytop = 0.83 * g_height; myleft = 0.04 * g_width; myheight = 0.15 * g_height; mywidth = 1.08 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.98 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D'>The </span><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D'><i>App</i></span><span style='font-family:"Gill Sans";
+font-size:200%;color:#E9EB5D'> findings reviewed in this presentation are part
+of an </span></span></layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 1.08 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D'>ongoing study by R. Williams. R. Homayouni, and R. Clark (July
+15, </span></span></layer><script>
+	mytop = 0.1 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.91 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D'>2005)</span><span style='font-family:"Gill Sans";font-size:300%;
+color:#E9EB5D;mso-special-format:lastCR;display:none'><br>
+</span></span></layer></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>END</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0028_image123.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0028_image123.png
new file mode 100755
index 00000000..a6ca39ae
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0028_image123.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0028_image124.png b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0028_image124.png
new file mode 100755
index 00000000..c17a41bc
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0028_image124.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0028_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0028_notes_pane.htm
new file mode 100755
index 00000000..3693ce68
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0028_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Ctbp2 should also be
+  considered a high priority biological candidate gene responsible for
+  modulating App expression levels. The<span style="mso-spacerun: yes">&nbsp;
+  </span>C-terminal binding protein 2 is a transcriptional co-repressor also
+  known as Ribeye.</font><font face=Times-Roman size=2> The gene produces two
+  transcripts encoding distinct proteins. The short form is a transcriptional
+  repressor that binds a Pro-X-Asp-Leu-Ser peptide motif common to adenoviral
+  oncoprotein E1a and a related motif in BKLF. This short form also interacts<span
+  style="mso-spacerun: yes">&nbsp; </span>with several transcription factors
+  including EVI1, ZFPM1, and<span style="mso-spacerun: yes">&nbsp;&nbsp;
+  </span>ZFHX1A (aka TCF8, deltaEF1). The longer isoform is a major component
+  of specialized synapses in photoreceptors. Both proteins contain a NAD+
+  binding domain similar to NAD+-dependent 2-hydroxyacid dehydrogenases.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>1. To find out more about
+  CTBP2 protein and the Ctbp2 gene, link to iHOP at
+  http://www.pdg.cnb.uam.es/UniPub/iHOP/ and type in CTBP2</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>Try Arrowsmith at
+  http://arrowsmith.psych.uic.edu/cgi-test/arrowsmith_uic/pubsmith.cgi</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>2. Both APP and CTBP2 are
+  involved in oxidoreducatase activity or Notch signalling. To estabilish this
+  common gene ontology visit NCBI<span style="mso-spacerun: yes">&nbsp;
+  </span>http://www.ncbi.nih.gov/entrez/query.fcgi?db=gene<span
+  style="mso-spacerun: yes">&nbsp; </span>and enter each gene symbol.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>3. You can get intersting
+  hints regarding Ctbp2 expression partners by examining the genetic
+  correlations between Ctbp2 probe set 1422887_a_at and all other transcripts
+  on the M430 Affymetrix array. Use the Striatum data set because we already
+  know from previous work (the previous slide) that this gene is a cis
+  QTL.<span style="mso-spacerun: yes">&nbsp; </span>You should be able to show
+  that Ctbp2 and Notch3 have antagonistic expression patterns in striatum. The
+  negative genetic correlation with E2f4 is even stronger. The transcript also
+  has a high positive genetic correlation with Rdh14. Of particualr interest
+  with respect to APP protein processing, Ctbp2 covaries positiviely with Bace2
+  (the transcript of the beta site APP-cleaving enzyme 2).</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0029.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0029.htm
new file mode 100755
index 00000000..74ec8342
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0029.htm
@@ -0,0 +1,34 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Aug-15-05: The GeneNetwork and WebQTL : PART 2    link to www.genenetwork.org">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
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+<script language=JavaScript src=script.js></script><script language=JavaScript>
+	if ( parent.base.msie < 0 ) {
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+function restore() {
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+}
+</script>
+<script language=JavaScript>
+function flatLoad() {
+if ( !parent.IsFullScrMode() )
+	parent.base.highlite();
+DoOnLoad();
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+      		parent.NavPopup.focus();
+      	else	
+  		self.focus();
+  	parent.base.SldUpdated( "slide0029.htm" );
+ } 	
+ </script><script language=JavaScript><!--
+function DoOnLoad() { 
+ }//-->
+</script>
+</head>
+<body bgcolor="#000000" onresize="restore()" onload="flatLoad()"
+onclick="DocumentOnClick(event)" onkeypress="_KPH(event)">
+<center><img src=Slide0001.gif border=0 usemap="#Slide0001.gif_map"></center>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0030.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0030.htm
new file mode 100755
index 00000000..5562bbe5
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0030.htm
@@ -0,0 +1,34 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:80% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript>
+	if ( parent.base.msie < 0 ) {
+	  	document.captureEvents(Event.MOUSEDOWN);
+  		document.captureEvents(Event.KEYPRESS);
+  		document.onkeypress = _KPH;
+  		document.onmousedown = _KPH;
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+  		
+function restore() {
+	if ( parent.base.msie < 0 ) 
+		self.location.reload();
+}
+</script>
+<script language=JavaScript>
+function flatLoad() {
+if ( !parent.IsFullScrMode() )
+	parent.base.highlite();
+DoOnLoad();
+  	
+      
+      if ( parent.IsFullScrMode() && parent.NavPopup && !parent.NavPopup.closed )
+      		parent.NavPopup.focus();
+      	else	
+  		self.focus();
+  	parent.base.SldUpdated( "slide0030.htm" );
+ } 	
+ </script><script language=JavaScript><!--
+function DoOnLoad() { 
+ }//-->
+</script>
+</head>
+<body bgcolor="#000000" onresize="restore()" onload="flatLoad()"
+onclick="DocumentOnClick(event)" onkeypress="_KPH(event)">
+<center><img src=Slide0002.gif border=0 usemap="#Slide0002.gif_map"></center>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0031.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0031.htm
new file mode 100755
index 00000000..63a89597
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0031.htm
@@ -0,0 +1,34 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:80% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript>
+	if ( parent.base.msie < 0 ) {
+	  	document.captureEvents(Event.MOUSEDOWN);
+  		document.captureEvents(Event.KEYPRESS);
+  		document.onkeypress = _KPH;
+  		document.onmousedown = _KPH;
+  	}
+  		
+function restore() {
+	if ( parent.base.msie < 0 ) 
+		self.location.reload();
+}
+</script>
+<script language=JavaScript>
+function flatLoad() {
+if ( !parent.IsFullScrMode() )
+	parent.base.highlite();
+DoOnLoad();
+  	
+      
+      if ( parent.IsFullScrMode() && parent.NavPopup && !parent.NavPopup.closed )
+      		parent.NavPopup.focus();
+      	else	
+  		self.focus();
+  	parent.base.SldUpdated( "slide0031.htm" );
+ } 	
+ </script><script language=JavaScript><!--
+function DoOnLoad() { 
+ }//-->
+</script>
+</head>
+<body bgcolor="#000000" onresize="restore()" onload="flatLoad()"
+onclick="DocumentOnClick(event)" onkeypress="_KPH(event)">
+<center><img src=Slide0003.gif border=0 usemap="#Slide0003.gif_map"></center>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0031_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0031_notes_pane.htm
new file mode 100755
index 00000000..4a9d3b57
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0031_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>END</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0032.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0032.htm
new file mode 100755
index 00000000..9be3d514
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0032.htm
@@ -0,0 +1,34 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content="Aug-15-05: Discovering upstream modulatory loci">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:80% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript>
+	if ( parent.base.msie < 0 ) {
+	  	document.captureEvents(Event.MOUSEDOWN);
+  		document.captureEvents(Event.KEYPRESS);
+  		document.onkeypress = _KPH;
+  		document.onmousedown = _KPH;
+  	}
+  		
+function restore() {
+	if ( parent.base.msie < 0 ) 
+		self.location.reload();
+}
+</script>
+<script language=JavaScript>
+function flatLoad() {
+if ( !parent.IsFullScrMode() )
+	parent.base.highlite();
+DoOnLoad();
+  	
+      
+      if ( parent.IsFullScrMode() && parent.NavPopup && !parent.NavPopup.closed )
+      		parent.NavPopup.focus();
+      	else	
+  		self.focus();
+  	parent.base.SldUpdated( "slide0032.htm" );
+ } 	
+ </script><script language=JavaScript><!--
+function DoOnLoad() { 
+ }//-->
+</script>
+</head>
+<body bgcolor="#000000" onresize="restore()" onload="flatLoad()"
+onclick="DocumentOnClick(event)" onkeypress="_KPH(event)">
+<center><img src=Slide0004.gif border=0 usemap="#Slide0004.gif_map"></center>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0033.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0033.htm
new file mode 100755
index 00000000..cbc5cab2
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0033.htm
@@ -0,0 +1,34 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Aug-15-05: WebQTL searches for upstream controllers">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:80% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript>
+	if ( parent.base.msie < 0 ) {
+	  	document.captureEvents(Event.MOUSEDOWN);
+  		document.captureEvents(Event.KEYPRESS);
+  		document.onkeypress = _KPH;
+  		document.onmousedown = _KPH;
+  	}
+  		
+function restore() {
+	if ( parent.base.msie < 0 ) 
+		self.location.reload();
+}
+</script>
+<script language=JavaScript>
+function flatLoad() {
+if ( !parent.IsFullScrMode() )
+	parent.base.highlite();
+DoOnLoad();
+  	
+      
+      if ( parent.IsFullScrMode() && parent.NavPopup && !parent.NavPopup.closed )
+      		parent.NavPopup.focus();
+      	else	
+  		self.focus();
+  	parent.base.SldUpdated( "slide0033.htm" );
+ } 	
+ </script><script language=JavaScript><!--
+function DoOnLoad() { 
+ }//-->
+</script>
+</head>
+<body bgcolor="#000000" onresize="restore()" onload="flatLoad()"
+onclick="DocumentOnClick(event)" onkeypress="_KPH(event)">
+<center><img src=Slide0005.gif border=0 usemap="#Slide0005.gif_map"></center>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0034.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0034.htm
new file mode 100755
index 00000000..70eb4eb1
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0034.htm
@@ -0,0 +1,34 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Aug-15-05: Genetic versus Physical maps for App expression">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:80% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript>
+	if ( parent.base.msie < 0 ) {
+	  	document.captureEvents(Event.MOUSEDOWN);
+  		document.captureEvents(Event.KEYPRESS);
+  		document.onkeypress = _KPH;
+  		document.onmousedown = _KPH;
+  	}
+  		
+function restore() {
+	if ( parent.base.msie < 0 ) 
+		self.location.reload();
+}
+</script>
+<script language=JavaScript>
+function flatLoad() {
+if ( !parent.IsFullScrMode() )
+	parent.base.highlite();
+DoOnLoad();
+  	
+      
+      if ( parent.IsFullScrMode() && parent.NavPopup && !parent.NavPopup.closed )
+      		parent.NavPopup.focus();
+      	else	
+  		self.focus();
+  	parent.base.SldUpdated( "slide0034.htm" );
+ } 	
+ </script><script language=JavaScript><!--
+function DoOnLoad() { 
+ }//-->
+</script>
+</head>
+<body bgcolor="#000000" onresize="restore()" onload="flatLoad()"
+onclick="DocumentOnClick(event)" onkeypress="_KPH(event)">
+<center><img src=Slide0006.gif border=0 usemap="#Slide0006.gif_map"></center>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0035.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0035.htm
new file mode 100755
index 00000000..9b947b02
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0035.htm
@@ -0,0 +1,34 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content="Aug-15-05: Physical map for distal chromosome 7">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:80% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript>
+	if ( parent.base.msie < 0 ) {
+	  	document.captureEvents(Event.MOUSEDOWN);
+  		document.captureEvents(Event.KEYPRESS);
+  		document.onkeypress = _KPH;
+  		document.onmousedown = _KPH;
+  	}
+  		
+function restore() {
+	if ( parent.base.msie < 0 ) 
+		self.location.reload();
+}
+</script>
+<script language=JavaScript>
+function flatLoad() {
+if ( !parent.IsFullScrMode() )
+	parent.base.highlite();
+DoOnLoad();
+  	
+      
+      if ( parent.IsFullScrMode() && parent.NavPopup && !parent.NavPopup.closed )
+      		parent.NavPopup.focus();
+      	else	
+  		self.focus();
+  	parent.base.SldUpdated( "slide0035.htm" );
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+ </script><script language=JavaScript><!--
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+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>By clicking on the
+   CORRELATION of the Atcay transcript to the App transcript, you can generate
+   a Correlation plot between these two transcripts. In this App and Atcay
+   scatterplot, each point is a strain mean value. For example, BXD33 and BXD8
+   have low App and Atcay expressions. The two parental strains and the F1 are
+   also included in this plot.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0044.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0044.htm
new file mode 100755
index 00000000..ec5c2e3c
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0044.htm
@@ -0,0 +1,93 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jul-18-05>
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
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+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
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+}
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+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
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+ LoadNavSld("slide0044.htm");
+}//-->
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+</layer><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.96 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:nobullet;text-align:left;font-family:"Gill Sans";
+font-weight:normal;font-style:normal;text-decoration:none;text-shadow:none;
+text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;
+font-size:213%;mso-text-raise:0%;mso-line-spacing:"-220 0 -216";mso-margin-left-alt:
+348;mso-text-indent-alt:56;mso-line-spacing:"-220 0 -216";mso-margin-left-alt:
+348;mso-text-indent-alt:56'><span style='mso-special-format:nobullet;
+display:none;color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'><i>App</i></span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'> transcript and eight of
+its neighbors</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.09 * g_height; myleft = 0.02 * g_width; myheight = 0.9 * g_height; mywidth = 0.83 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.02 * g_width;
+yy = 0.09 * g_height;
+ht = 0.9 * g_height;
+wd = 0.83 * g_width;
+document.write(
+'<img border=0 src="slide0013_image027.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>A group of traits from
+   many different databases can be selected and brought together for joint
+   analysis. In this case all of the content of the BXD SELECTIONS is from a
+   single BRAIN database, the top 20 neighbors of the App transcript from the
+   Correlation Results table. Eight of these neighbors plus App is shown in the
+   slide.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Notes:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Arial size=3>1.</font><font
+   face=Helvetica size=3>All of items in the BXD SELECTIONS were selected using
+   the SELECT ALL button</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>2. The buttons at the
+   top (and bottom) of this page can do some cool stuff. We will work with
+   NETWORK GRAPH first.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>3. Think of the
+   SELECTIONS as your shopping cart. You go to different aisles in the
+   supermarket to acquire different types of items of interest. These could
+   include transcripts, classical phenotypes (longevity, brain weight, prepulse
+   inhibition, iron levels in midbrain). �Checking out� in this case involves
+   doing some analysis with the items in the cart.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>4. Different tools
+   handle different numbers of items. Most will handle up to 100 traits.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0045.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0045.htm
new file mode 100755
index 00000000..4e705866
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0045.htm
@@ -0,0 +1,118 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Jul-18-05: App transcript coexpression neighborhood">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
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+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
+		min = window.innerHeight/20;
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+	self.location.reload();
+}
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+	document.SlideLayer.height = window.innerHeight;
+}
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+document.onkeypress = _KPH ;
+document.onmousedown = _KPH ;
+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0045.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
+bgcolor="#000000">
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+document.write(
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+</layer><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div></div>
+</layer><script>
+	mytop = -0.02 * g_height; myleft = 0 * g_width; myheight = 0.12 * g_height; mywidth = 1.05 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.02 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 1.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%'><span style='font-size:82%'><i>App</i></span><span
+style='font-size:82%'> transcript coexpression neighborhood</span><span
+style='mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
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+</script>
+<div><script language=JavaScript><!--
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+'<img border=0 src="slide0014_image029.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.11 * g_height; myleft = 0.01 * g_width; myheight = 0.25 * g_height; mywidth = 0.79 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
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+</script></div>
+</layer><script>
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+</script>
+<div><script language=JavaScript><!--
+xx = 0.81 * g_width;
+yy = 0.1 * g_height;
+ht = 0.09 * g_height;
+wd = 0.18 * g_width;
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+//-->
+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Output of the Network
+   Graph. Warm colors (orange and red) are positive correlations above 0.5
+   whereas cool colors (green and blue) are negative correlations. Notes:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Arial size=3>1.</font><font
+   face=Helvetica size=3> All of the nodes (gene/transcripts) on this graph are
+   clickable.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>2. For this graph the
+   App expression values have �reverted� to their pre-Windsorized values.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>3. To generate this
+   graph, we used the default setting:<span style="mso-spacerun: yes">&nbsp;
+   </span>Size of 16 by 16 inches; Gene Symbols; Don't Show Correlations; Use
+   curved lines (aka �edges�).</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0046.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0046.htm
new file mode 100755
index 00000000..93429543
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0046.htm
@@ -0,0 +1,104 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jul-18-05>
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
+		min = window.innerHeight/20;
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+}
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+function restore() {
+	self.location.reload();
+}
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+	document.SlideLayer.height = window.innerHeight;
+}
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+function DoOnLoad() { 
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+}//-->
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+<div><script language=JavaScript><!--
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+wd =   g_width;
+document.write(
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+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.91 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:nobullet;text-align:left;font-family:"Gill Sans";
+font-weight:normal;font-style:normal;text-decoration:none;text-shadow:none;
+text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;
+font-size:213%;mso-text-raise:0%;mso-line-spacing:"-220 0 -216";mso-margin-left-alt:
+292;mso-text-indent-alt:0;mso-line-spacing:"-220 0 -216";mso-margin-left-alt:
+292;mso-text-indent-alt:0'><span style='mso-special-format:nobullet;display:
+none;color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>Correlations of </span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'><i>App</i></span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'> with classical traits</span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.28 * g_height; myleft = 0.04 * g_width; myheight = 0.7 * g_height; mywidth = 0.78 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
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+yy = 0.28 * g_height;
+ht = 0.7 * g_height;
+wd = 0.78 * g_width;
+document.write(
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+//-->
+</script></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0.04 * g_width; myheight = 0.19 * g_height; mywidth = 0.33 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.04 * g_width;
+yy = 0.08 * g_height;
+ht = 0.19 * g_height;
+wd = 0.33 * g_width;
+document.write(
+'<img border=0 src="slide0015_image035.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Going back to the Trait
+   Data and Analysis Form window, we have computed the correlations between
+   strain variation in App expression level and other classical phenotypes that
+   have already been measured in many of the same BXD strains.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Notes:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Arial size=3>1.</font><font
+   face=Helvetica size=3>The number of common strains varies widely--in this
+   case from 14 to 23 strains.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>2. We can add these
+   traits (four are selected) to our BXD SELECTIONS window.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0047.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0047.htm
new file mode 100755
index 00000000..e7568e44
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0047.htm
@@ -0,0 +1,93 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jul-18-05>
+<style media=print>
+<!--.sld
+	{left:0px !important;
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+<script language=JavaScript>
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+}//-->
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+</script>
+<div><script language=JavaScript><!--
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+document.write(
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+</script></div>
+</layer><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.98 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:nobullet;text-align:left;font-family:"Gill Sans";
+font-weight:normal;font-style:normal;text-decoration:none;text-shadow:none;
+text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;
+font-size:213%;mso-text-raise:0%;mso-line-spacing:"-220 0 -216";mso-margin-left-alt:
+292;mso-text-indent-alt:0;mso-line-spacing:"-220 0 -216";mso-margin-left-alt:
+292;mso-text-indent-alt:0'><span style='mso-special-format:nobullet;display:
+none;color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>Network Graph of </span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'><i>App</i></span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'> with classical traits</span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0.03 * g_width; myheight = 0.9 * g_height; mywidth = 0.88 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.03 * g_width;
+yy = 0.08 * g_height;
+ht = 0.9 * g_height;
+wd = 0.88 * g_width;
+document.write(
+'<img border=0 src="slide0016_image036.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>We have computed the
+   Network Graph, now using other types of traits.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Saline Hot Plate
+   Latency is the green node labeled 10020.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Freezing (fear) is the
+   green node labeled 10447.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Notes:</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0048.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0048.htm
new file mode 100755
index 00000000..f36b1e25
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0048.htm
@@ -0,0 +1,151 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jul-18-05>
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
+		min = window.innerHeight/20;
+		
+	return min+"pt";
+}
+var SoundEnabled = navigator.plugins && navigator.plugins["LiveAudio"];
+function restore() {
+	self.location.reload();
+}
+function set_size() {
+	document.SlideLayer.width = window.innerWidth;
+	document.SlideLayer.height = window.innerHeight;
+}
+document.captureEvents(Event.MOUSEDOWN);
+document.captureEvents(Event.KEYPRESS);
+document.onkeypress = _KPH ;
+document.onmousedown = _KPH ;
+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0048.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
+bgcolor="#000000">
+<script>
+
+g_origHeight = 566;
+g_origWidth = 755;
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+g_height = window.innerHeight - 10;
+
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+g_left = 0;
+
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+	g_height = g_width * g_origHeight / g_origWidth;
+else
+	g_width = g_origWidth * g_height / g_origHeight;
+	
+g_top = (window.innerHeight - g_height) / 2;
+g_left = (window.innerWidth - g_width) / 2;
+
+document.write( '<layer id=SlideLayer BGCOLOR=#484848 background="" top=' + g_top + ' left=' + g_left + ' height=' + g_height + ' width=' + g_width + ' >' );
+document.SlideLayer.clip.top = 0;
+document.SlideLayer.clip.left = 0;
+document.SlideLayer.clip.height = g_height;
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+function new_font_size() {
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+	if ( size < 1 ) size = 1;
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+}
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+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.png" height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.01 * g_height; myleft = 0.03 * g_width; myheight = 0.14 * g_height; mywidth = 0.93 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.91 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:nobullet;text-align:left;font-family:"Gill Sans";
+font-weight:normal;font-style:normal;text-decoration:none;text-shadow:none;
+text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;
+font-size:213%;mso-text-raise:0%;mso-line-spacing:"-220 0 -216";mso-margin-left-alt:
+292;mso-text-indent-alt:0;mso-line-spacing:"-220 0 -216";mso-margin-left-alt:
+292;mso-text-indent-alt:0'><span style='mso-special-format:nobullet;display:
+none;color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>Summary of Part 1:</span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.1 * g_height; myleft = 0.08 * g_width; myheight = 0.47 * g_height; mywidth = 1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div>
+<layer>
+ <div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+ normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+ no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+ mso-text-raise:0%'></div>
+</layer>
+<layer>
+ <div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+ normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+ no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+ mso-text-raise:0%'></div>
+</layer>
+<layer>
+ <div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+ normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+ no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+ mso-text-raise:0%'></div>
+</layer>
+<layer>
+ <div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+ normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+ no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+ mso-text-raise:0%'></div>
+</layer>
+<script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.9 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:numbullet;font-family:Arial;text-align:left;
+font-family:Verdana;font-weight:normal;font-style:normal;text-decoration:none;
+text-shadow:none;text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;
+color:black;mso-color-index:1;font-size:80%;mso-text-raise:0%;mso-margin-left-alt:
+144;mso-margin-left-alt:144'><script>
+	mytop = 0 * g_height; myleft = 0.02 * g_width; myheight = 0.05 * g_height; mywidth = 0.88 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:numbullet;
+position:absolute;left:-2.84%;font-family:Arial'>1.</span></span><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>You have learned the basics
+about searching for traits<br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.85 * g_width;
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+</script>
+<div style='mso-special-format:numbullet;font-family:Arial;text-align:left;
+font-family:Verdana;font-weight:normal;font-style:normal;text-decoration:none;
+text-shadow:none;text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;
+color:black;mso-color-index:1;font-size:80%;mso-text-raise:0%;mso-margin-left-alt:
+144;mso-margin-left-alt:144'><script>
+	mytop = 0 * g_height; myleft = 0.02 * g_width; myheight = 0.05 * g_height; mywidth = 0.83 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:numbullet;
+position:absolute;left:-3.03%;font-family:Arial'>2.</span></span><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>You know some methods to check
+data quality<br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.1 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.85 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:numbullet;font-family:Arial;text-align:left;
+font-family:Verdana;font-weight:normal;font-style:normal;text-decoration:none;
+text-shadow:none;text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;
+color:black;mso-color-index:1;font-size:80%;mso-text-raise:0%;mso-margin-left-alt:
+144;mso-margin-left-alt:144'><script>
+	mytop = 0 * g_height; myleft = 0.02 * g_width; myheight = 0.05 * g_height; mywidth = 0.83 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:numbullet;
+position:absolute;left:-3.03%;font-family:Arial'>3.</span></span><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>You know how to edit bad or
+suspicious data<br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.16 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.9 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:numbullet;font-family:Arial;text-align:left;
+font-family:Verdana;font-weight:normal;font-style:normal;text-decoration:none;
+text-shadow:none;text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;
+color:black;mso-color-index:1;font-size:80%;mso-text-raise:0%;mso-margin-left-alt:
+144;mso-margin-left-alt:144'><script>
+	mytop = 0 * g_height; myleft = 0.02 * g_width; myheight = 0.05 * g_height; mywidth = 0.88 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:numbullet;
+position:absolute;left:-2.85%;font-family:Arial'>4.</span></span><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>You know how to review the
+basic statistics of a trait<br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.21 * g_height; myleft = 0 * g_width; myheight = 0.1 * g_height; mywidth = 0.94 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:numbullet;font-family:Arial;text-align:left;
+font-family:Verdana;font-weight:normal;font-style:normal;text-decoration:none;
+text-shadow:none;text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;
+color:black;mso-color-index:1;font-size:80%;mso-text-raise:0%;mso-margin-left-alt:
+144;mso-margin-left-alt:144'><script>
+	mytop = 0 * g_height; myleft = 0.02 * g_width; myheight = 0.05 * g_height; mywidth = 0.91 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:numbullet;
+position:absolute;left:-2.74%;font-family:Arial'>5.</span></span><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>You know how to generate a
+scattergram between two </span></span></layer><script>
+	mytop = 0.05 * g_height; myleft = 0.02 * g_width; myheight = 0.05 * g_height; mywidth = 0.83 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'>traits using the Traits Correlation tool<br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.31 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:numbullet;font-family:Arial;text-align:left;
+font-family:Verdana;font-weight:normal;font-style:normal;text-decoration:none;
+text-shadow:none;text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;
+color:black;mso-color-index:1;font-size:80%;mso-text-raise:0%;mso-margin-left-alt:
+144;mso-margin-left-alt:144'><script>
+	mytop = 0 * g_height; myleft = 0.02 * g_width; myheight = 0.05 * g_height; mywidth = 0.98 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:numbullet;
+position:absolute;left:-2.56%;font-family:Arial'>6.</span></span><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>You know how to add items to
+your SELECTIONS window<br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.37 * g_height; myleft = 0 * g_width; myheight = 0.1 * g_height; mywidth = 1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:numbullet;font-family:Arial;text-align:left;
+font-family:Verdana;font-weight:normal;font-style:normal;text-decoration:none;
+text-shadow:none;text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;
+color:black;mso-color-index:1;font-size:80%;mso-text-raise:0%;mso-margin-left-alt:
+144;mso-margin-left-alt:144'><script>
+	mytop = 0 * g_height; myleft = 0.02 * g_width; myheight = 0.05 * g_height; mywidth = 0.97 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:numbullet;
+position:absolute;left:-2.57%;font-family:Arial'>7.</span></span><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>You know how to generate a
+Network Graph of traits that </span></span></layer><script>
+	mytop = 0.05 * g_height; myleft = 0.02 * g_width; myheight = 0.05 * g_height; mywidth = 0.83 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'>co-vary. </span></span></layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.67 * g_height; myleft = 0.05 * g_width; myheight = 0.26 * g_height; mywidth = 1.05 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 1.05 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'>What does genetic covariance mean? The genetic
+covariance can </span></span></layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 1.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'>be functional and mechanistic, but it can also
+be due to linkage </span></span></layer><script>
+	mytop = 0.1 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 1.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'>disequilibrium. Finally, it can be due to
+sampling error or poor </span></span></layer><script>
+	mytop = 0.16 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.92 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'>experimental design. Evaluate the biological
+plausibility of </span></span></layer><script>
+	mytop = 0.21 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.89 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'>correlations. Test and be skeptical.</span></span></layer></div>
+</layer></div>
+</LAYER>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0049.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0049.htm
new file mode 100755
index 00000000..9d36600a
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0049.htm
@@ -0,0 +1,155 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Jul-18-05: The GeneNetwork and WebQTL : PART 2    link to www.genenetwork.org">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
+		min = window.innerHeight/20;
+		
+	return min+"pt";
+}
+var SoundEnabled = navigator.plugins && navigator.plugins["LiveAudio"];
+function restore() {
+	self.location.reload();
+}
+function set_size() {
+	document.SlideLayer.width = window.innerWidth;
+	document.SlideLayer.height = window.innerHeight;
+}
+document.captureEvents(Event.MOUSEDOWN);
+document.captureEvents(Event.KEYPRESS);
+document.onkeypress = _KPH ;
+document.onmousedown = _KPH ;
+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0049.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
+bgcolor="#000000">
+<script>
+
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+g_origWidth = 755;
+g_width = window.innerWidth - 10;
+g_height = window.innerHeight - 10;
+
+g_top = 0;
+g_left = 0;
+
+if ( g_width < ( g_origWidth * g_height /g_origHeight ) )
+	g_height = g_width * g_origHeight / g_origWidth;
+else
+	g_width = g_origWidth * g_height / g_origHeight;
+	
+g_top = (window.innerHeight - g_height) / 2;
+g_left = (window.innerWidth - g_width) / 2;
+
+document.write( '<layer id=SlideLayer BGCOLOR=#484848 background="" top=' + g_top + ' left=' + g_left + ' height=' + g_height + ' width=' + g_width + ' >' );
+document.SlideLayer.clip.top = 0;
+document.SlideLayer.clip.left = 0;
+document.SlideLayer.clip.height = g_height;
+document.SlideLayer.clip.width = g_width;
+function new_font_size() {
+	var size = 11 * g_width / g_origWidth;
+	if ( size < 1 ) size = 1;
+	return size+"pt";
+}
+</script>
+<div id=SlideObj class=sld style='position:relative;font-size:&{new_font_size()};'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 1 * g_height; mywidth = 1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.png" height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.03 * g_height; myleft = 0.02 * g_width; myheight = 0.18 * g_height; mywidth = 0.96 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.02 * g_height; myleft = 0 * g_width; myheight = 0.13 * g_height; mywidth = 0.94 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:"-277 0 -1";mso-margin-left-alt:232;
+mso-text-indent-alt:0;mso-line-spacing:"-277 0 -1";mso-margin-left-alt:232;
+mso-text-indent-alt:0'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.94 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:73%'>The GeneNetwork and WebQTL
+: PART 2<span style="mso-spacerun: yes">&nbsp;&nbsp; </span><br>
+</span></span></layer><script>
+	mytop = 0.06 * g_height; myleft = 0.04 * g_width; myheight = 0.06 * g_height; mywidth = 0.89 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:73%'>link to www.genenetwork.org</span><span
+style='font-size:73%;mso-special-format:lastCR;display:none'><i><br>
+</i></span></span></layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.24 * g_height; myleft = 0.05 * g_width; myheight = 0.68 * g_height; mywidth = 0.54 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.42 * g_height; mywidth = 0.52 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;font-size:213%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.21 * g_height; mywidth = 0.52 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-220 0 -216";mso-margin-left-alt:348;mso-text-indent-alt:
+56'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.46 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='mso-special-format:nobullet;display:none;
+color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3'>Part 1. How to study </span></span></layer><script>
+	mytop = 0.05 * g_height; myleft = 0.05 * g_width; myheight = 0.06 * g_height; mywidth = 0.41 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:94%;color:#E9EB5D;mso-color-index:
+3'>expression variation </span></span></layer><script>
+	mytop = 0.1 * g_height; myleft = 0.05 * g_width; myheight = 0.06 * g_height; mywidth = 0.47 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:94%;color:#E9EB5D;mso-color-index:
+3'>and genetic correlation </span></span></layer><script>
+	mytop = 0.15 * g_height; myleft = 0.05 * g_width; myheight = 0.06 * g_height; mywidth = 0.41 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:94%;color:#E9EB5D;mso-color-index:
+3'>(slides 2&#8211;17)<br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.25 * g_height; myleft = 0 * g_width; myheight = 0.16 * g_height; mywidth = 0.48 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-220 0 -216";mso-margin-left-alt:348;mso-text-indent-alt:
+56'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.46 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='mso-special-format:nobullet;display:none;
+color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3'>Part 2. Discovering </span></span></layer><script>
+	mytop = 0.05 * g_height; myleft = 0.05 * g_width; myheight = 0.06 * g_height; mywidth = 0.43 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:94%;color:#E9EB5D;mso-color-index:
+3'>upstream modulators </span></span></layer><script>
+	mytop = 0.1 * g_height; myleft = 0.05 * g_width; myheight = 0.06 * g_height; mywidth = 0.41 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:94%;color:#E9EB5D;mso-color-index:
+3'>(slides 18&#8211;29)</span></span></layer></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.17 * g_height; myleft = 0.74 * g_width; myheight = 0.64 * g_height; mywidth = 0.23 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.74 * g_width;
+yy = 0.17 * g_height;
+ht = 0.64 * g_height;
+wd = 0.23 * g_width;
+document.write(
+'<img border=0 src="slide0018_image037.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.75 * g_height; myleft = 0.74 * g_width; myheight = 0.14 * g_height; mywidth = 0.1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-346 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:"Arial Rounded MT Bold";font-size:233%;color:#6E6E6E'>RNA</span><span
+style='font-family:"Arial Rounded MT Bold";font-size:300%;color:#6E6E6E;
+display:none'><br>
+</span></div>
+</layer><script>
+	mytop = 0.06 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.08 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-346 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:"Arial Rounded MT Bold";font-size:300%;color:#6E6E6E;
+mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.82 * g_height; myleft = 0.04 * g_width; myheight = 0.18 * g_height; mywidth = 0.96 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div></div>
+</layer><script>
+	mytop = 0.5 * g_height; myleft = 0.48 * g_width; myheight = 0.13 * g_height; mywidth = 0.25 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.48 * g_width;
+yy = 0.5 * g_height;
+ht = 0.13 * g_height;
+wd = 0.25 * g_width;
+document.write(
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+//-->
+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Part 2: Discovering
+   upstream modulators and quantitative trait loci (QTLs). A quantitative trait
+   locus is a chromosomal region that harbors one or a few polymorphic gene
+   loci that influence a trait. We are going to be looking for QTLs that
+   modulate the steady state expression level of App in the adult mouse
+   forebrain.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0050.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0050.htm
new file mode 100755
index 00000000..48469040
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0050.htm
@@ -0,0 +1,919 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
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+}
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+</layer><script>
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+</script>
+<div style='text-align:center;mso-line-spacing:"-134 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Times;font-size:117%;
+color:white;display:none'><br>
+</span></div>
+</layer><script>
+	mytop = 0.03 * g_height; myleft = 0 * g_width; myheight = 0.02 * g_height; mywidth = 0.29 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-134 0 0";mso-margin-left-alt:
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+color:white;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.02 * g_height; myleft = -0.05 * g_width; myheight = 0.11 * g_height; mywidth = 1.05 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.1 * g_height; mywidth = 1.05 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 1.05 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-240 0 0";mso-margin-left-alt:
+16;mso-text-indent-alt:16'><span style='font-family:Arial;font-size:267%;
+color:#E9EB5D'>How to make recombinant inbred strains (RI)</span><span
+style='font-family:Arial;font-size:150%;color:aqua;display:none'><br>
+</span></div>
+</layer><script>
+	mytop = 0.06 * g_height; myleft = 0.06 * g_width; myheight = 0.03 * g_height; mywidth = 0.92 * g_width;
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+</script>
+<div style='text-align:center;mso-line-spacing:"-160 0 0";mso-margin-left-alt:
+16;mso-text-indent-alt:16'><span style='font-family:Arial;font-size:150%;
+color:aqua;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.28 * g_height; myleft = 0.45 * g_width; myheight = 0.01 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.45 * g_width;
+yy = 0.28 * g_height;
+ht = 0.01 * g_height;
+wd = 0.18 * g_width;
+document.write(
+'<img border=0 src="slide0019_image039.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.2 * g_height; myleft = 0.28 * g_width; myheight = 0.11 * g_height; mywidth = 0.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.28 * g_width;
+yy = 0.2 * g_height;
+ht = 0.11 * g_height;
+wd = 0.01 * g_width;
+document.write(
+'<img border=0 src="slide0019_image040.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.15 * g_height; myleft = 0.25 * g_width; myheight = 0.09 * g_height; mywidth = 0.19 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:150%;color:#FFFF99'>C57BL/6J
+(B)<br>
+</span></div>
+</layer><script>
+	mytop = 0.04 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.15 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:150%;color:#FFFF99;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.2 * g_height; myleft = 0.3 * g_width; myheight = 0.11 * g_height; mywidth = 0.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.3 * g_width;
+yy = 0.2 * g_height;
+ht = 0.11 * g_height;
+wd = 0.01 * g_width;
+document.write(
+'<img border=0 src="slide0019_image041.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.15 * g_height; myleft = 0.62 * g_width; myheight = 0.09 * g_height; mywidth = 0.16 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.15 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
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+</script>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
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+(D)<br>
+</span></div>
+</layer><script>
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+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
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+<div><script language=JavaScript><!--
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+</layer><script>
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+</script>
+<div><script language=JavaScript><!--
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+</script></div>
+</layer><script>
+	mytop = 0.35 * g_height; myleft = 0.24 * g_width; myheight = 0.04 * g_height; mywidth = 0 * g_width;
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+<div><script language=JavaScript><!--
+xx = 0.24 * g_width;
+yy = 0.35 * g_height;
+ht = 0.04 * g_height;
+wd = 0 * g_width;
+document.write(
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+//-->
+</script></div>
+</layer><script>
+	mytop = 0.35 * g_height; myleft = 0.4 * g_width; myheight = 0.04 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
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+yy = 0.35 * g_height;
+ht = 0.04 * g_height;
+wd = 0 * g_width;
+document.write(
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+</layer><script>
+	mytop = 0.35 * g_height; myleft = 0.57 * g_width; myheight = 0.04 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
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+</layer><script>
+	mytop = 0.35 * g_height; myleft = 0.74 * g_width; myheight = 0.03 * g_height; mywidth = 0 * g_width;
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+</script>
+<div><script language=JavaScript><!--
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+ht = 0.03 * g_height;
+wd = 0 * g_width;
+document.write(
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+//-->
+</script></div>
+</layer><script>
+	mytop = 0.42 * g_height; myleft = 0.05 * g_width; myheight = 0.12 * g_height; mywidth = 0.06 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0.01 * g_width; myheight = 0.1 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-230 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:200%;color:#FFFF99'><b>F1<br>
+</b></span></div>
+</layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-230 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:200%;color:#FFFF99;mso-special-format:
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+</b></span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.39 * g_height; myleft = 0.22 * g_width; myheight = 0.11 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.22 * g_width;
+yy = 0.39 * g_height;
+ht = 0.11 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0019_image048.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.39 * g_height; myleft = 0.38 * g_width; myheight = 0.11 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.38 * g_width;
+yy = 0.39 * g_height;
+ht = 0.11 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0019_image049.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.39 * g_height; myleft = 0.55 * g_width; myheight = 0.11 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.55 * g_width;
+yy = 0.39 * g_height;
+ht = 0.11 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0019_image050.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.39 * g_height; myleft = 0.72 * g_width; myheight = 0.11 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.72 * g_width;
+yy = 0.39 * g_height;
+ht = 0.11 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0019_image051.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.43 * g_height; myleft = 0.43 * g_width; myheight = 0.03 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.43 * g_width;
+yy = 0.43 * g_height;
+ht = 0.03 * g_height;
+wd = 0.11 * g_width;
+document.write(
+'<img border=0 src="slide0019_image052.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.6 * g_height; myleft = 0.2 * g_width; myheight = 0.03 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.2 * g_width;
+yy = 0.6 * g_height;
+ht = 0.03 * g_height;
+wd = 0.09 * g_width;
+document.write(
+'<img border=0 src="slide0019_image053.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.71 * g_height; myleft = 0.58 * g_width; myheight = 0.26 * g_height; mywidth = 0.2 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.03 * g_height; myleft = 0.01 * g_width; myheight = 0.22 * g_height; mywidth = 0.17 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.15 * g_height; mywidth = 0.17 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-269 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.17 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:center'><span style='font-family:Arial;font-size:117%;
+color:#FFFF99'><b>20 generations </b></span></span></layer><script>
+	mytop = 0.06 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.17 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:center'><span style='font-family:Arial;font-size:117%;
+color:#FFFF99'><b>brother-sister </b></span></span></layer><script>
+	mytop = 0.12 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.17 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:center'><span style='font-family:Arial;font-size:117%;
+color:#FFFF99'><b>matings</b></span><span style='font-family:Arial;font-size:
+233%;color:#FFFF99;display:none'><b><br>
+</b></span></span></layer></div>
+</layer><script>
+	mytop = 0.16 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.17 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-269 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:233%;
+color:#FFFF99;mso-special-format:lastCR;display:none'><b><br>
+</b></span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.6 * g_height; myleft = 0.5 * g_width; myheight = 0.03 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.5 * g_width;
+yy = 0.6 * g_height;
+ht = 0.03 * g_height;
+wd = 0.09 * g_width;
+document.write(
+'<img border=0 src="slide0019_image054.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.62 * g_height; myleft = 0.54 * g_width; myheight = 0.28 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.54 * g_width;
+yy = 0.62 * g_height;
+ht = 0.28 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0019_image055.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.61 * g_height; myleft = 0.79 * g_width; myheight = 0.03 * g_height; mywidth = 0.1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.79 * g_width;
+yy = 0.61 * g_height;
+ht = 0.03 * g_height;
+wd = 0.1 * g_width;
+document.write(
+'<img border=0 src="slide0019_image056.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.62 * g_height; myleft = 0.83 * g_width; myheight = 0.28 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.83 * g_width;
+yy = 0.62 * g_height;
+ht = 0.28 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0019_image057.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.92 * g_height; myleft = 0.21 * g_width; myheight = 0.09 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.07 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.07 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:150%;color:#FFFF99'>BXD1</span><span
+style='font-family:Arial;font-size:150%;color:#484848;display:none'><br>
+</span></div>
+</layer><script>
+	mytop = 0.04 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.06 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:150%;color:#484848;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.92 * g_height; myleft = 0.51 * g_width; myheight = 0.09 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.07 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.07 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:150%;color:#FFFF99'>BXD2<br>
+</span></div>
+</layer><script>
+	mytop = 0.04 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.06 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:150%;color:#FFFF99;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.92 * g_height; myleft = 0.8 * g_width; myheight = 0.05 * g_height; mywidth = 0.1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.03 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%;mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17;mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'>BXD80</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.9 * g_height; myleft = 0.64 * g_width; myheight = 0.17 * g_height; mywidth = 0.17 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0.01 * g_width; myheight = 0.15 * g_height; mywidth = 0.16 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.16 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-341 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:300%;color:#FFFF99'>+ � +<br>
+</span></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.13 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-341 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:300%;color:#FFFF99;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.62 * g_height; myleft = 0.04 * g_width; myheight = 0.12 * g_height; mywidth = 0.06 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.1 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-230 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:200%;color:#FFFF99'><b>F2<br>
+</b></span></div>
+</layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-230 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:200%;color:#FFFF99;mso-special-format:
+lastCR;display:none'><b><br>
+</b></span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.54 * g_height; myleft = 0.18 * g_width; myheight = 0.01 * g_height; mywidth = 0.75 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.18 * g_width;
+yy = 0.54 * g_height;
+ht = 0.01 * g_height;
+wd = 0.75 * g_width;
+document.write(
+'<img border=0 src="slide0019_image058.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.54 * g_height; myleft = 0.17 * g_width; myheight = 0.03 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.17 * g_width;
+yy = 0.54 * g_height;
+ht = 0.03 * g_height;
+wd = 0 * g_width;
+document.write(
+'<img border=0 src="slide0019_image059.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.54 * g_height; myleft = 0.32 * g_width; myheight = 0.03 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.32 * g_width;
+yy = 0.54 * g_height;
+ht = 0.03 * g_height;
+wd = 0 * g_width;
+document.write(
+'<img border=0 src="slide0019_image060.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.54 * g_height; myleft = 0.48 * g_width; myheight = 0.04 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.48 * g_width;
+yy = 0.54 * g_height;
+ht = 0.04 * g_height;
+wd = 0 * g_width;
+document.write(
+'<img border=0 src="slide0019_image061.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.54 * g_height; myleft = 0.62 * g_width; myheight = 0.04 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.62 * g_width;
+yy = 0.54 * g_height;
+ht = 0.04 * g_height;
+wd = 0 * g_width;
+document.write(
+'<img border=0 src="slide0019_image062.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.54 * g_height; myleft = 0.77 * g_width; myheight = 0.04 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.77 * g_width;
+yy = 0.54 * g_height;
+ht = 0.04 * g_height;
+wd = 0 * g_width;
+document.write(
+'<img border=0 src="slide0019_image063.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.54 * g_height; myleft = 0.92 * g_width; myheight = 0.03 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.92 * g_width;
+yy = 0.54 * g_height;
+ht = 0.03 * g_height;
+wd = 0 * g_width;
+document.write(
+'<img border=0 src="slide0019_image064.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.44 * g_height; myleft = 0.49 * g_width; myheight = 0.1 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.49 * g_width;
+yy = 0.44 * g_height;
+ht = 0.1 * g_height;
+wd = 0 * g_width;
+document.write(
+'<img border=0 src="slide0019_image065.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.57 * g_height; myleft = 0.15 * g_width; myheight = 0.11 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.15 * g_width;
+yy = 0.57 * g_height;
+ht = 0.11 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0019_image066.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.57 * g_height; myleft = 0.3 * g_width; myheight = 0.11 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.3 * g_width;
+yy = 0.57 * g_height;
+ht = 0.11 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0019_image067.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.57 * g_height; myleft = 0.46 * g_width; myheight = 0.11 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.46 * g_width;
+yy = 0.57 * g_height;
+ht = 0.11 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0019_image068.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.57 * g_height; myleft = 0.6 * g_width; myheight = 0.11 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.6 * g_width;
+yy = 0.57 * g_height;
+ht = 0.11 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0019_image069.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.57 * g_height; myleft = 0.75 * g_width; myheight = 0.11 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.75 * g_width;
+yy = 0.57 * g_height;
+ht = 0.11 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0019_image070.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.57 * g_height; myleft = 0.9 * g_width; myheight = 0.11 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.9 * g_width;
+yy = 0.57 * g_height;
+ht = 0.11 * g_height;
+wd = 0.04 * g_width;
+document.write(
+'<img border=0 src="slide0019_image071.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.84 * g_height; myleft = 0.56 * g_width; myheight = 0.01 * g_height; mywidth = 0.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.56 * g_width;
+yy = 0.84 * g_height;
+ht = 0.01 * g_height;
+wd = 0.01 * g_width;
+document.write(
+'<img border=0 src="slide0019_image072.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.8 * g_height; myleft = 0.25 * g_width; myheight = 0.11 * g_height; mywidth = 0.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.25 * g_width;
+yy = 0.8 * g_height;
+ht = 0.11 * g_height;
+wd = 0.01 * g_width;
+document.write(
+'<img border=0 src="slide0019_image073.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.84 * g_height; myleft = 0.86 * g_width; myheight = 0.02 * g_height; mywidth = 0.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.86 * g_width;
+yy = 0.84 * g_height;
+ht = 0.02 * g_height;
+wd = 0.01 * g_width;
+document.write(
+'<img border=0 src="slide0019_image074.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.75 * g_height; myleft = 0.01 * g_width; myheight = 0.13 * g_height; mywidth = 0.13 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0 * g_width; myheight = 0.11 * g_height; mywidth = 0.13 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.03 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'><b>BXD RI<br>
+</b></span></div>
+</layer><script>
+	mytop = 0.03 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.13 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'><b>Strain set<br>
+</b></span></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0.01 * g_width; myheight = 0.03 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99;mso-special-format:lastCR;display:none'><b><br>
+</b></span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.12 * g_height; myleft = 0.14 * g_width; myheight = 0.06 * g_height; mywidth = 0.1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.14 * g_width;
+yy = 0.12 * g_height;
+ht = 0.06 * g_height;
+wd = 0.1 * g_width;
+document.write(
+'<img border=0 src="slide0019_image075.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.1 * g_height; myleft = 0.76 * g_width; myheight = 0.08 * g_height; mywidth = 0.14 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.76 * g_width;
+yy = 0.1 * g_height;
+ht = 0.08 * g_height;
+wd = 0.14 * g_width;
+document.write(
+'<img border=0 src="slide0019_image076.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.2 * g_height; myleft = 0.17 * g_width; myheight = 0.13 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0 * g_width; myheight = 0.11 * g_height; mywidth = 0.08 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.07 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'>fully<br>
+</span></div>
+</layer><script>
+	mytop = 0.03 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.08 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'>inbred<br>
+</span></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.07 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.38 * g_height; myleft = 0.02 * g_width; myheight = 0.09 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'>isogenic<br>
+</span></div>
+</layer><script>
+	mytop = 0.04 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.54 * g_height; myleft = 0.01 * g_width; myheight = 0.13 * g_height; mywidth = 0.12 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0 * g_width; myheight = 0.11 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'>hetero-<br>
+</span></div>
+</layer><script>
+	mytop = 0.03 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'>geneous<br>
+</span></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.74 * g_height; myleft = 0.29 * g_width; myheight = 0.21 * g_height; mywidth = 0.21 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.19 * g_height; mywidth = 0.19 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.15 * g_height; mywidth = 0.19 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.19 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:center'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'>Recombined </span></span></layer><script>
+	mytop = 0.04 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.19 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:center'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'>chromosomes </span></span></layer><script>
+	mytop = 0.08 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.19 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:center'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'>are needed for </span></span></layer><script>
+	mytop = 0.12 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.19 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:center'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99'>mapping<br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.16 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.19 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-173 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Arial;font-size:150%;
+color:#FFFF99;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.1 * g_height; myleft = 0.25 * g_width; myheight = 0.09 * g_height; mywidth = 0.1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-173 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Arial;font-size:150%;color:#FFFF99'>female<br>
+</span></div>
+</layer><script>
+	mytop = 0.04 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.07 * g_width;
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+</LAYER>
+
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+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>The next few slides
+   provide a short introduction to mapping the loci that are responsible for
+   variation in a trait such as App expression level. These modulatory regions
+   of the genome are sometimes called quantitative trait loci or QTLs. You may
+   want to do some independent reading on this topic if this is your first
+   exposure to QTL analysis.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>The genetic reference
+   population (GRP) of BXD recombinant inbred strains were originally generated
+   about 25 years ago by Benjamin Taylor at The Jackson Laboratory. He crossed
+   female C57BL/6J mice with male DBA/2J mice to generate the F1 and F2
+   progeny. At the bottom of this slide we have schematized one chromosome pair
+   from three of the BXD RI strains.<span style="mso-spacerun: yes">&nbsp;
+   </span>The dashed vertical lines that lead to the final BXD RI lines involve
+   21 full sib matings (about 7 years of breeding). Some lines die out during
+   inbreeding. For example, there is no longer any BXD3 strain.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Notes:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>1. Over the last decade,
+   our group (Lu Lu and Rob Williams) and Jeremy Peirce and Lee Silver at
+   Princeton have enlarged Ben Taylor�s set. There are now just over 80 BXD
+   strains. They have all been genotyped using about 13,700 markers (SNPs and
+   microsatellites). These markers are used to define the �blue� and �red�
+   regions of the chromosomes as shown in the figure above.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>2. Chromosomes of RI GRPs
+   usually have about 4 times as many recombinations as those of F2 animals.
+   However, unlike an F2, both chromosomes of an RI are identical. Therefore,
+   50 RI strains contain as many recombinations as 100 F2 animals.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>3. BXD43 through BXD100
+   were generated using a special method that resulted in a further doubling of
+   the average recombination density per chromosome. The entire set of 80 BXDs
+   therefore contains as many recombinations as about 260 F2 animals.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
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+</html>
+\ No newline at end of file
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+g_left = 0;
+
+if ( g_width < ( g_origWidth * g_height /g_origHeight ) )
+	g_height = g_width * g_origHeight / g_origWidth;
+else
+	g_width = g_origWidth * g_height / g_origHeight;
+	
+g_top = (window.innerHeight - g_height) / 2;
+g_left = (window.innerWidth - g_width) / 2;
+
+document.write( '<layer id=SlideLayer BGCOLOR=#484848 background="" top=' + g_top + ' left=' + g_left + ' height=' + g_height + ' width=' + g_width + ' >' );
+document.SlideLayer.clip.top = 0;
+document.SlideLayer.clip.left = 0;
+document.SlideLayer.clip.height = g_height;
+document.SlideLayer.clip.width = g_width;
+function new_font_size() {
+	var size = 11 * g_width / g_origWidth;
+	if ( size < 1 ) size = 1;
+	return size+"pt";
+}
+</script>
+<div id=SlideObj class=sld style='position:relative;font-size:&{new_font_size()};'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 1 * g_height; mywidth = 1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.png" height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.4 * g_height; myleft = 0.73 * g_width; myheight = 0.05 * g_height; mywidth = 0.14 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.73 * g_width;
+yy = 0.4 * g_height;
+ht = 0.05 * g_height;
+wd = 0.14 * g_width;
+document.write(
+'<img border=0 src="slide0020_image090.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.4 * g_height; myleft = 0.74 * g_width; myheight = 0.07 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-126 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Gadget;font-size:150%;color:white'>aa<br>
+</span></div>
+</layer><script>
+	mytop = 0.03 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-126 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Gadget;font-size:150%;color:white;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.16 * g_height; myleft = 0.73 * g_width; myheight = 0.05 * g_height; mywidth = 0.14 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.73 * g_width;
+yy = 0.16 * g_height;
+ht = 0.05 * g_height;
+wd = 0.14 * g_width;
+document.write(
+'<img border=0 src="slide0020_image091.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.16 * g_height; myleft = 0.74 * g_width; myheight = 0.07 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-126 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Gadget;font-size:150%;color:white'>aaaa<br>
+</span></div>
+</layer><script>
+	mytop = 0.03 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-126 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:Gadget;font-size:150%;color:white;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.2 * g_height; myleft = 0.71 * g_width; myheight = 0.19 * g_height; mywidth = 0.25 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0.01 * g_width; myheight = 0.16 * g_height; mywidth = 0.24 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.24 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-384 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><span style='font-size:267%;color:#E2EBF0'>D2 strain</span><span
+style='font-family:Palatino;font-size:333%;color:#FBFDB8;display:none'><br>
+</span></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.21 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-384 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><span style='font-family:Palatino;font-size:333%;color:#FBFDB8;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.43 * g_height; myleft = 0.71 * g_width; myheight = 0.19 * g_height; mywidth = 0.25 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.02 * g_height; myleft = 0.01 * g_width; myheight = 0.16 * g_height; mywidth = 0.24 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.24 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-384 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><span style='font-size:267%;color:#F6BF69'>B6 strain</span><span
+style='font-family:Palatino;font-size:333%;color:#F6BF69;display:none'><br>
+</span></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.21 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-384 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><span style='font-family:Palatino;font-size:333%;color:#F6BF69;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.17 * g_height; myleft = 0.31 * g_width; myheight = 0.42 * g_height; mywidth = 0.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.31 * g_width;
+yy = 0.17 * g_height;
+ht = 0.42 * g_height;
+wd = 0.01 * g_width;
+document.write(
+'<img border=0 src="slide0020_image092.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.4 * g_height; myleft = 0.31 * g_width; myheight = 0.03 * g_height; mywidth = 0.39 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.31 * g_width;
+yy = 0.4 * g_height;
+ht = 0.03 * g_height;
+wd = 0.39 * g_width;
+document.write(
+'<img border=0 src="slide0020_image093.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.2 * g_height; myleft = 0.38 * g_width; myheight = 0.26 * g_height; mywidth = 0.3 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0.01 * g_width; myheight = 0.23 * g_height; mywidth = 0.27 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.13 * g_height; mywidth = 0.27 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-320 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.27 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'><i>amount of
+</i></span></span></layer><script>
+	mytop = 0.07 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.27 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'><i>transcript</i></span><span
+style='font-family:Palatino;font-size:367%;color:#E9EB5D;display:none'><br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.14 * g_height; myleft = 0 * g_width; myheight = 0.09 * g_height; mywidth = 0.27 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-422 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><span style='font-family:Palatino;font-size:367%;color:#E9EB5D;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.06 * g_height; myleft = 0.72 * g_width; myheight = 0.19 * g_height; mywidth = 0.21 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0.01 * g_width; myheight = 0.16 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-384 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><span style='font-size:267%;color:white'>4 </span><span style='font-size:
+233%;color:white'>units</span><span style='font-family:Palatino;font-size:333%;
+color:#E9EB5D;display:none'><br>
+</span></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-384 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><span style='font-family:Palatino;font-size:333%;color:#E9EB5D;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.29 * g_height; myleft = 0.72 * g_width; myheight = 0.19 * g_height; mywidth = 0.21 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.02 * g_height; myleft = 0.01 * g_width; myheight = 0.16 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-384 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><span style='font-size:267%;color:white'>2</span><span style='font-size:
+233%;color:white'> units</span><span style='font-family:Palatino;font-size:
+333%;color:#E9EB5D;display:none'><br>
+</span></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-384 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><span style='font-family:Palatino;font-size:333%;color:#E9EB5D;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.15 * g_height; myleft = 0.31 * g_width; myheight = 0.05 * g_height; mywidth = 0.4 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.31 * g_width;
+yy = 0.15 * g_height;
+ht = 0.05 * g_height;
+wd = 0.4 * g_width;
+document.write(
+'<img border=0 src="slide0020_image094.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.17 * g_height; myleft = 0.09 * g_width; myheight = 0.16 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-350 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:300%;color:#E2EBF0'>D<br>
+</span></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-350 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:300%;color:#E2EBF0;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.17 * g_height; myleft = 0.17 * g_width; myheight = 0.16 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-350 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:300%;color:#F6BF69'>B<br>
+</span></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-350 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:300%;color:#F6BF69;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.79 * g_height; myleft = 0.05 * g_width; myheight = 0.13 * g_height; mywidth = 1.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.12 * g_height; mywidth = 1.02 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%;mso-line-spacing:"-256 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17;mso-line-spacing:"-256 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 1.02 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E2EBF0'>D</span><span
+style='font-size:233%;color:#E9EB5D'> </span><span style='font-size:200%;
+color:#E9EB5D'>and </span><span style='font-size:233%;color:#F6BF69'>B</span><span
+style='font-size:233%;color:#E9EB5D'> </span><span style='font-size:200%;
+color:#E9EB5D'>may be SNP-like variants in the promoter </span></span></layer><script>
+	mytop = 0.04 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 1.02 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:200%;color:#E9EB5D'>itself (cis
+QTL) or in </span><span style='font-size:200%;color:#EAEC5E'>upstream genes
+(trans QTLs)</span><span style='font-size:300%;color:#E9EB5D'>.</span></span></layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0.04 * g_width; myheight = 0.16 * g_height; mywidth = 0.22 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.22 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-233 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-size:200%;color:#E9EB5D'>UPSTREAM<br>
+</span></div>
+</layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.22 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-233 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-size:200%;color:#E9EB5D'>modulators<br>
+</span></div>
+</layer><script>
+	mytop = 0.1 * g_height; myleft = 0.01 * g_width; myheight = 0.05 * g_height; mywidth = 0.2 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-233 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-size:200%;color:#E9EB5D;
+mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0.44 * g_width; myheight = 0.17 * g_height; mywidth = 0.16 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.16 * g_height; mywidth = 0.14 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.14 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-350 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><span style='font-size:300%;color:#E2EBF0'>High<br>
+</span></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.14 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-350 0 0";mso-margin-left-alt:16;mso-text-indent-alt:
+16'><span style='font-size:300%;color:#E2EBF0;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.63 * g_height; myleft = 0.08 * g_width; myheight = 0.17 * g_height; mywidth = 0.06 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.16 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-350 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:300%;color:#E2EBF0'>D<br>
+</span></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-350 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:300%;color:#E2EBF0;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.63 * g_height; myleft = 0.15 * g_width; myheight = 0.17 * g_height; mywidth = 0.05 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.16 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-350 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:300%;color:#F6BF69'>B<br>
+</span></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-350 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:300%;color:#F6BF69;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.71 * g_height; myleft = 0.07 * g_width; myheight = 0.12 * g_height; mywidth = 0.16 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.1 * g_height; mywidth = 0.14 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.14 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-233 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:200%;color:#E9EB5D'><i>cis QTL</i></span><span
+style='font-size:200%;color:#E9EB5D;display:none'><br>
+</span></div>
+</layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.12 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-233 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:200%;color:#E9EB5D;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.57 * g_height; myleft = -0.01 * g_width; myheight = 0.07 * g_height; mywidth = 1.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = -0.01 * g_width;
+yy = 0.57 * g_height;
+ht = 0.07 * g_height;
+wd = 1.01 * g_width;
+document.write(
+'<img border=0 src="slide0020_image095.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.44 * g_height; myleft = 0.47 * g_width; myheight = 0.12 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-272 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:233%;color:#F6BF69'>Low<br>
+</span></div>
+</layer><script>
+	mytop = 0.06 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.07 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-272 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:233%;color:#F6BF69;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.58 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 1.13 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.04 * g_height; mywidth = 1.12 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%;mso-line-spacing:"-200 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17;mso-line-spacing:"-200 0 0";mso-margin-left-alt:17;
+mso-text-indent-alt:17'><span style='font-family:Gadget;font-size:167%;
+color:white'>&gt;&gt;&gt;&gt;PROMOTER--ATG-Exon1-Intron1-Exon2-Intron2 -
+etc-3'UTR &gt;&gt;&gt;&gt;&gt;</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.37 * g_height; myleft = 0.08 * g_width; myheight = 0.2 * g_height; mywidth = 0.13 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.08 * g_width;
+yy = 0.37 * g_height;
+ht = 0.2 * g_height;
+wd = 0.13 * g_width;
+document.write(
+'<img border=0 src="slide0020_image096.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.4 * g_height; myleft = 0.1 * g_width; myheight = 0.11 * g_height; mywidth = 0.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-269 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:"\30D2\30E9\30AE\30CE\89D2\30B4 Pro W3";
+font-size:233%;color:white'><b>&#4;</b></span><span style='font-family:Palatino;
+font-size:233%;color:white;display:none'><b><br>
+</b></span></div>
+</layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-269 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Palatino;font-size:233%;
+color:white;mso-special-format:lastCR;display:none'><b><br>
+</b></span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.4 * g_height; myleft = 0.18 * g_width; myheight = 0.11 * g_height; mywidth = 0.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-269 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:"\30D2\30E9\30AE\30CE\89D2\30B4 Pro W3";
+font-size:233%;color:white'><b>&#4;</b></span><span style='font-family:Palatino;
+font-size:233%;color:white;display:none'><b><br>
+</b></span></div>
+</layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-269 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Palatino;font-size:233%;
+color:white;mso-special-format:lastCR;display:none'><b><br>
+</b></span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.33 * g_height; myleft = 0.08 * g_width; myheight = 0.2 * g_height; mywidth = 0.13 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.08 * g_width;
+yy = 0.33 * g_height;
+ht = 0.2 * g_height;
+wd = 0.13 * g_width;
+document.write(
+'<img border=0 src="slide0020_image097.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.36 * g_height; myleft = 0.18 * g_width; myheight = 0.11 * g_height; mywidth = 0.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-269 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:"\30D2\30E9\30AE\30CE\89D2\30B4 Pro W3";
+font-size:233%;color:white'><b>&#4;</b></span><span style='font-family:Palatino;
+font-size:233%;color:white;display:none'><b><br>
+</b></span></div>
+</layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-269 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Palatino;font-size:233%;
+color:white;mso-special-format:lastCR;display:none'><b><br>
+</b></span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.36 * g_height; myleft = 0.1 * g_width; myheight = 0.11 * g_height; mywidth = 0.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
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+17;mso-text-indent-alt:17'><span style='font-family:"\30D2\30E9\30AE\30CE\89D2\30B4 Pro W3";
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+font-size:233%;color:white;display:none'><b><br>
+</b></span></div>
+</layer><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center;mso-line-spacing:"-269 0 0";mso-margin-left-alt:
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+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
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+mso-text-raise:0%'><script>
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+</script>
+<div style='text-align:center;mso-line-spacing:"-269 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Palatino;font-size:233%;
+color:white;display:none'><b><br>
+</b></span></div>
+</layer><script>
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+<div style='text-align:center;mso-line-spacing:"-269 0 0";mso-margin-left-alt:
+17;mso-text-indent-alt:17'><span style='font-family:Palatino;font-size:233%;
+color:white;mso-special-format:lastCR;display:none'><b><br>
+</b></span></div>
+</layer></div>
+</layer><script>
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+</script>
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+//-->
+</script></div>
+</layer><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.1 * g_height; mywidth = 0.19 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.19 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-233 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:200%;color:#E9EB5D'><i>trans QTL</i></span><span
+style='font-size:200%;color:#E9EB5D;display:none'><br>
+</span></div>
+</layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.16 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-233 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-size:200%;color:#E9EB5D;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>This slide is
+   illustrates two major types of QTLs that modulate variability in
+   transcript-relative steady state abundance.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>1. cis QTLs are defined
+   as QTLs that are closely linked to the gene whose transcript is the measured
+   trait. For example, a polymorphism in the promoter that affects binding of a
+   transcription factor. However, cis QTLs can be far upstream or downstream polymorphisms
+   in enhancers or may be in 3� UTR binding sites that affect message
+   stability.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>2. trans QTLs map far
+   enough away from the location of the gene that gives rise to the transcript
+   that is being measured so that we can be fairly certain that the QTL is not
+   in the gene itself. The most blatant type of trans QTL would be a
+   polymorphism in a transcription factor. But in the majority of cases, the
+   trans QTLs can be far removed in a mechanistic sense from the actual events
+   modulating transcript abundance. That is why there are three overlapping
+   arrows in the figure.<span style="mso-spacerun: yes">&nbsp; </span>The way
+   in which an upstream polymorphism influences a downstream difference in mRNA
+   abundance can be indirect. Effects can:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3><span
+   style="mso-spacerun: yes">&nbsp;&nbsp; </span>a.<span style="mso-spacerun:
+   yes">&nbsp; </span>cross tissue types (a polymorphic liver enzyme may affect
+   CNS gene expression)</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3><span
+   style="mso-spacerun: yes">&nbsp;&nbsp; </span>b.<span style="mso-spacerun:
+   yes">&nbsp; </span>cross time (the modulator is only expressed for one day
+   during development but has permanent effects in adults)</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3><span
+   style="mso-spacerun: yes">&nbsp;&nbsp; </span>c.<span style="mso-spacerun:
+   yes">&nbsp; </span>may be contingent on environmental factors (heat shock
+   may trigger the expression of a polymorphic factor that affects mRNA
+   abundance).</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0052.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0052.htm
new file mode 100755
index 00000000..7a2e03db
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0052.htm
@@ -0,0 +1,115 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content="Jul-18-05: Discovering upstream modulatory loci">
+<style media=print>
+<!--.sld
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+	document.SlideLayer.height = window.innerHeight;
+}
+document.captureEvents(Event.MOUSEDOWN);
+document.captureEvents(Event.KEYPRESS);
+document.onkeypress = _KPH ;
+document.onmousedown = _KPH ;
+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0052.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
+bgcolor="#000000">
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+g_left = (window.innerWidth - g_width) / 2;
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+</script>
+<div><script language=JavaScript><!--
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+wd =   g_width;
+document.write(
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+//-->
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+</script>
+<div><script language=JavaScript><!--
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+//-->
+</script></div>
+</layer><script>
+	mytop = 0.05 * g_height; myleft = 0.02 * g_width; myheight = 0.08 * g_height; mywidth = 0.93 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0.01 * g_width; myheight = 0.06 * g_height; mywidth = 0.91 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:"-358 0 -1";mso-line-spacing:"-358 0 -1"'><span
+style='font-family:Verdana;font-size:64%'>Discovering upstream modulatory loci</span><span
+style='font-family:Verdana;font-size:73%;mso-special-format:lastCR;display:
+none'><i><br>
+</i></span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.2 * g_height; myleft = 0.18 * g_width; myheight = 0.25 * g_height; mywidth = 0.19 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.18 * g_width;
+yy = 0.2 * g_height;
+ht = 0.25 * g_height;
+wd = 0.19 * g_width;
+document.write(
+'<img border=0 src="slide0021_image100.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.32 * g_height; myleft = 0.78 * g_width; myheight = 0.25 * g_height; mywidth = 0.19 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.78 * g_width;
+yy = 0.32 * g_height;
+ht = 0.25 * g_height;
+wd = 0.19 * g_width;
+document.write(
+'<img border=0 src="slide0021_image101.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Please bring the Trait
+   Data and Analysis window to the front and look for the Interval Mapping
+   button. Confirm that you are back to the trait amyloid beta precursor
+   protein.<span style="mso-spacerun: yes">&nbsp; </span>If so, then just click
+   the button.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Notice that the default
+   for:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Select Chrs (chromosomes)
+   is ALL</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Select Mapping Scale is
+   set to GENETIC</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Options: Permutation test
+   YES<span style="mso-spacerun: yes">&nbsp; </span>(2000 is the default
+   number)</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Options: Bootstrap test
+   YES (2000 is the default number)</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0053.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0053.htm
new file mode 100755
index 00000000..d729b467
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0053.htm
@@ -0,0 +1,155 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Jul-18-05: WebQTL searches for upstream controllers">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
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+function restore() {
+	self.location.reload();
+}
+function set_size() {
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+	document.SlideLayer.height = window.innerHeight;
+}
+document.captureEvents(Event.MOUSEDOWN);
+document.captureEvents(Event.KEYPRESS);
+document.onkeypress = _KPH ;
+document.onmousedown = _KPH ;
+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0053.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
+bgcolor="#000000">
+<script>
+
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+
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+g_top = (window.innerHeight - g_height) / 2;
+g_left = (window.innerWidth - g_width) / 2;
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+function new_font_size() {
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+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.png" height=' + ht + ' width=' + wd + '>' );
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+</layer><script>
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+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:"-358 0 -1";mso-margin-left-alt:233;
+mso-text-indent-alt:0;mso-line-spacing:"-358 0 -1";mso-margin-left-alt:233;
+mso-text-indent-alt:0'><span style='font-family:Verdana;font-size:64%'><i>WebQTL
+searches for upstream controllers</i></span><span style='font-family:Verdana;
+font-size:73%;mso-special-format:lastCR;display:none'><i><br>
+</i></span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.71 * g_height; myleft = 0.34 * g_width; myheight = 0.19 * g_height; mywidth = 0.45 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.18 * g_height; mywidth = 0.44 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.44 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:167%;color:#E9EB5D'><i>App maps
+on Chr 16 (blue </i></span></span></layer><script>
+	mytop = 0.04 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.44 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:167%;color:#E9EB5D'><i>arrow
+points to the orange </i></span></span></layer><script>
+	mytop = 0.09 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.38 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:167%;color:#E9EB5D'><i>triangle)
+but the best </i></span></span></layer><script>
+	mytop = 0.13 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.38 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:167%;color:#E9EB5D'><i>locus is
+on Chr 7.</i></span><span style='font-size:233%;color:#E9EB5D;mso-special-format:
+lastCR;display:none'><i><br>
+</i></span></span></layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0.01 * g_width; myheight = 0.53 * g_height; mywidth = 0.98 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.01 * g_width;
+yy = 0.08 * g_height;
+ht = 0.53 * g_height;
+wd = 0.98 * g_width;
+document.write(
+'<img border=0 src="slide0022_image102.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.46 * g_height; myleft = 0.15 * g_width; myheight = 0.53 * g_height; mywidth = 0.15 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.15 * g_width;
+yy = 0.46 * g_height;
+ht = 0.53 * g_height;
+wd = 0.15 * g_width;
+document.write(
+'<img border=0 src="slide0022_image103.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.46 * g_height; myleft = 0.8 * g_width; myheight = 0.53 * g_height; mywidth = 0.1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.8 * g_width;
+yy = 0.46 * g_height;
+ht = 0.53 * g_height;
+wd = 0.1 * g_width;
+document.write(
+'<img border=0 src="slide0022_image104.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.41 * g_height; myleft = 0.76 * g_width; myheight = 0.22 * g_height; mywidth = 0.11 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.76 * g_width;
+yy = 0.41 * g_height;
+ht = 0.22 * g_height;
+wd = 0.11 * g_width;
+document.write(
+'<img border=0 src="slide0022_image105.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.41 * g_height; myleft = 0.29 * g_width; myheight = 0.24 * g_height; mywidth = 0.12 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.29 * g_width;
+yy = 0.41 * g_height;
+ht = 0.24 * g_height;
+wd = 0.12 * g_width;
+document.write(
+'<img border=0 src="slide0022_image106.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>This is a major output
+   type: a so-called full-genome interval map.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>The X-axis represents all
+   19 autosomes and the X chromosome as if they were laid end to end with short
+   gaps between the telomere of one chromosome and the centromere of the next
+   chromosome (mouse chromosomes only have a single long arm and the centromere
+   represents the origin of each chromosome for numerical purpose: 0
+   centimorgans at almost 0 megabases). The blue labels along the bottom of the
+   figure list a subset of the 3795 markers that were used in mapping.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>The thick blue wavy line
+   running across chromosomes summarizes the strength of association between
+   variation in the phenotype (App expression differences) and the two
+   genotypes of all markers and the intervals between markers (hence, interval
+   mapping).<span style="mso-spacerun: yes">&nbsp; </span>The height of the
+   wave (blue Y-axis to the left) provides the likelihood ratio statistic
+   (LRS). Divide by 4.61 to convert these values to LOD scores.<span
+   style="mso-spacerun: yes">&nbsp; </span>Or you can read them as a
+   chi-square-like statistic.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>The red line and the red
+   axis to the far right provides an estimate of the effect that a QTL has on
+   expression of App (this estimate of the so-called additive effect tends to
+   be too high). If the red line is below the X-axis then this means that the
+   allele inherited from C57BL/6J (B6 or B) at a particular marker is
+   associated with higher values. If the red line is above the X-axis then the
+   DBA/2J allele (D2 or D) is associated with higher trait values. Multiply the
+   additive effect size by 2 to estimate the difference between the set of
+   strains that have the B/B genotype and those that have the D/D genotype at a
+   specific marker. For example, on distal Chr 7 the red line peaks at a value
+   of about 0.2. That means that this region of chromosome 2 is responsible for
+   a 0.4 unit expression difference between B/B strains and the D/D strains.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>The yellow histogram
+   bars: These summarize the results of a whole-genome bootstrap of the trait
+   that is performed 1000 times. What is a bootstrap? A bootstrap provides a
+   method to evaluate whether results are robust. If we drop out one strain, do
+   we still get the same results? When mapping quantitative traits, each strain
+   normally gets one equally weighted vote. But using the bootstrap procedure,
+   we give each strain a random weighting factor of between 0 and 1.<span
+   style="mso-spacerun: yes">&nbsp; </span>We then remap the trait and find THE
+   SINGLE BEST LRS VALUE per bootstrap. We do this 1000 times. In this example,
+   most bootstrap results cluster on Chr 3 and Chr 7 under the LRS peaks. That
+   is somewhat reassuring. But notice that a substantial number of bootstrap
+   are scattered around on other chromosomes. About 30% of the bootstrap
+   resamples have a peak on Chr 7. That is pretty good, but does makes us
+   realize that the sample we are working with is still quite small and
+   fragile.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>The horizontal dashed
+   lines at 10.5 and 17.3 are the likelihood ratio statistic (LRS) values
+   associated with the suggestive and significant genome-wide probabilities
+   that were established by permutations of phenotypes across genotypes. We
+   shuffle randomly 2000 times and obtain a distribution of peak LRS scores to
+   generate a null distribution. Five percent of the time, one of these
+   permuted data sets will have a peak LRS higher than 17.3. We call that level
+   the 0.05 significance threshold for a whole genome scan. The p = 0.67 point
+   is the the suggestive level, and corresponds to the green dashed line.<span
+   style="mso-spacerun: yes">&nbsp; </span>These thresholds are conservative
+   for transcripts that have expression variation that is highly heritable. The
+   putative or suggestive QTL on Chr 3 is probably more than just suggestive.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>One other point: the
+   mapping procedure we use is computationally very fast, but it is relatively
+   simple. We are not looking for gene-gene interactions and we are not fitting
+   multiple QTLs in combinations. Consider this QTL analysis a first pass that
+   will highlight hot spots and warm spots that are worth following up on using
+   more sophisticated models.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>CLICKABLE REGIONS:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>1. If you click on the
+   Chromosome number then you will generate a new map just for that chromosome.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>2. If you click on the
+   body of the map, say on the blue line, then you will generate a view on a 10
+   Mb window of that part of the genome from the UCSC Genome Browser web site.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>3. If you click on a
+   marker symbol, then you will generate a new Trait data and Analysis window
+   with the genotypes loaded into the window just like any other trait. More on
+   this in Section 3.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>4. You can drag these
+   maps off of the browser window and onto your desktop. They will be saved as
+   PNG or PDF files. You can import them into Photoshop or other programs.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>5. There is also an
+   option at the bottom of the page to download a 2X higher resolution image of
+   this plot for papers and presentations.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>6. You can also download
+   the results of the analysis in a text format</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0054.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0054.htm
new file mode 100755
index 00000000..64dbe68f
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+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
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+content="Jul-18-05: Genetic versus Physical maps for App expression">
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+<div><script language=JavaScript><!--
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+wd =   g_width;
+document.write(
+'<img src="master03_background.png" height=' + ht + ' width=' + wd + '>' );
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+</layer><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.08 * g_height; mywidth = 1.16 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 1.15 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:"-358 0 -1";mso-margin-left-alt:233;
+mso-text-indent-alt:0;mso-line-spacing:"-358 0 -1";mso-margin-left-alt:233;
+mso-text-indent-alt:0'><span style='font-family:Verdana;font-size:64%'><i>Genetic
+versus Physical maps for App expression</i></span><span style='font-family:
+Verdana;font-size:73%;mso-special-format:lastCR;display:none'><i><br>
+</i></span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0.01 * g_width; myheight = 0.39 * g_height; mywidth = 0.98 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.01 * g_width;
+yy = 0.08 * g_height;
+ht = 0.39 * g_height;
+wd = 0.98 * g_width;
+document.write(
+'<img border=0 src="slide0023_image107.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.35 * g_height; myleft = 0.01 * g_width; myheight = 0.54 * g_height; mywidth = 0.98 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.01 * g_width;
+yy = 0.35 * g_height;
+ht = 0.54 * g_height;
+wd = 0.98 * g_width;
+document.write(
+'<img border=0 src="slide0023_image108.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.91 * g_height; myleft = 0.05 * g_width; myheight = 0.07 * g_height; mywidth = 0.95 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.03 * g_height; mywidth = 0.95 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:117%;color:#E9EB5D'><i>The
+difference between genetic and physical scale is analogous to measuring the </i></span></span></layer><script>
+	mytop = 0.03 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.92 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:117%;color:#E9EB5D'><i>separation
+between New York and Boston in either travel hours or kilometers</i></span><span
+style='font-size:150%;color:#E9EB5D'><i>.</i></span><span style='font-size:
+167%;color:#E9EB5D;mso-special-format:lastCR;display:none'><i><br>
+</i></span></span></layer></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>The map on the top has an
+   X-axis scale based on frequency of recombinations events between markers (B
+   to D transitions, see slide 19 for a color-coded example). These so-called
+   genetic maps are scaled in centimorgan (recombinations per 100 gametes). In
+   contrast, the physical map shown below the genetic map has an X-axis scale
+   based on DNA length measured in nucleotides or base-pairs. Notice the large
+   difference between the two maps in the size of Chr 19 (large on the genetic
+   scale but small on the physical scale).</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Also notice the large
+   difference in the width of the chromosome 7 QTL peak. In mice,
+   recombinations occur with higher frequency toward the telomeric side (righ
+   sidet) of each chromosome. As a result, genetic maps are stretched out more
+   toward the telomere relative to a physical map. The QTL on distal Chr 7 is
+   therefore actually more precisely mapped than might appear looking at the
+   genetic map.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>The physical scale is
+   becoming more useful than the genetic scale primarily because many other
+   data types can be easily superimposed on a physical map. You will see more
+   examples in the next several slides.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0055.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0055.htm
new file mode 100755
index 00000000..cae5b4b9
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0055.htm
@@ -0,0 +1,110 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
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+</script>
+<meta name=Description content="Jul-18-05: Physical map for distal chromosome 7">
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+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.png" height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.08 * g_height; mywidth = 1.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.98 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:"-358 0 -1";mso-margin-left-alt:233;
+mso-text-indent-alt:0;mso-line-spacing:"-358 0 -1";mso-margin-left-alt:233;
+mso-text-indent-alt:0'><span style='font-family:Verdana;font-size:64%'>Physical
+map for distal chromosome 7</span><span style='font-family:Verdana;font-size:
+73%;mso-special-format:lastCR;display:none'><i><br>
+</i></span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0.05 * g_width; myheight = 0.06 * g_height; mywidth = 0.94 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.04 * g_height; mywidth = 0.92 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><span style='font-size:167%;color:#E9EB5D'>Distal Chr 7 from
+~120 and 132 Mb may modulate</span><span style='font-size:167%;color:#E9EB5D'><i>
+App</i></span><span style='font-size:200%;color:#E9EB5D;mso-special-format:
+lastCR;display:none'><i><br>
+</i></span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.93 * g_height; myleft = 0.06 * g_width; myheight = 0.03 * g_height; mywidth = 0.75 * g_width;
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+</script>
+<div><script language=JavaScript><!--
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+'<img border=0 src="slide0024_image109.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
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+//-->
+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Physical map of variation
+   in App expression in brain on distal Chr 7 (a blow up of the whole-genome
+   map on the previous slide).</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Notes:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Arial size=3>1.</font><font
+   face=Verdana size=3> You can now see that the X-axis is on a physical scale
+   of megabases (Mb). The QTL peak is roughly between 120 and 132 Mb.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>2. The small irregular
+   colored blocks and marks toward the top of the map mark the locations of
+   genes superimposed on the physical map. Neighboring genes are offset
+   slightly in the vertical axis for display purpose. Note one region of very
+   high gene density from about 120 to 123 Mb.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>3. The orange hash marks
+   along the X-axis represent the number of single nucleotide polymorphisms
+   that distinguish the two parental strains (C57BL/6J and DBA/2J) from each
+   other. We call this the SNP seismograph track (see Glossary for more
+   details). Regions with low numbers of SNP have closely matched sequences and
+   are less likely to contain QTLs.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>4. As before, the thin
+   red line shows the additive effect size. By convention the positive values
+   signify the D alleles are associated with higher expression of App in this
+   region of Chr 7 than the B alleles. The maximum effect size is about +0.20
+   log2 expression units per D allele. The differences been the BB and DD
+   genotypes (BB and DD because each strain has two alleles; one per
+   chromosome) is therefore about 2^0.4 = 1.32; or a 32% increment in DD
+   relative to BB at this locus.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>5. If you scroll just
+   under the Physical Map you will see text that reads �DISPLAY from XXX Mb TO
+   YYY Mb�..�<span style="mso-spacerun: yes">&nbsp; </span>These physical maps
+   are zoomable, a feature we will exploit to evaluate candidate genes in this
+   QTL interval.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0056.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0056.htm
new file mode 100755
index 00000000..eba3fc05
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0056.htm
@@ -0,0 +1,134 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content="Jul-18-05: Evaluating candidate genes">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
+		min = window.innerHeight/20;
+		
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+}
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+}
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+	document.SlideLayer.height = window.innerHeight;
+}
+document.captureEvents(Event.MOUSEDOWN);
+document.captureEvents(Event.KEYPRESS);
+document.onkeypress = _KPH ;
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+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0056.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
+bgcolor="#000000">
+<script>
+
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.png" height=' + ht + ' width=' + wd + '>' );
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+</layer><script>
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+'<img border=0 src="slide0025_image112.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = -0.01 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.93 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0.01 * g_width; myheight = 0.06 * g_height; mywidth = 0.91 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:"-358 0 -1";mso-line-spacing:"-358 0 -1"'><span
+style='font-family:Verdana;font-size:64%'>Evaluating candidate genes</span><span
+style='font-family:Verdana;font-size:73%;mso-special-format:lastCR;display:
+none'><i><br>
+</i></span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0.01 * g_width; myheight = 0.22 * g_height; mywidth = 0.34 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.01 * g_width;
+yy = 0.08 * g_height;
+ht = 0.22 * g_height;
+wd = 0.34 * g_width;
+document.write(
+'<img border=0 src="slide0025_image113.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.03 * g_height; myleft = 0.69 * g_width; myheight = 0.17 * g_height; mywidth = 0.33 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.16 * g_height; mywidth = 0.31 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.31 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center'><span style='font-size:200%;color:#E9EB5D'><i>Right
+position<br>
+</i></span></div>
+</layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.1 * g_height; mywidth = 0.31 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.31 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:center'><span style='font-size:200%;color:#E9EB5D'><i>and
+high </i></span></span></layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.31 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:center'><span style='font-size:200%;color:#E9EB5D'><i>correlation</i></span></span></layer></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.17 * g_height; myleft = 0.75 * g_width; myheight = 0.14 * g_height; mywidth = 0.21 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.12 * g_height; mywidth = 0.21 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center'><span style='font-size:267%;color:#E9EB5D'><i><span
+style="mso-spacerun: yes">&nbsp;</span></i></span><span style='font-size:200%;
+color:#E9EB5D'><i>= better<br>
+</i></span></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.21 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:center'><span style='font-size:200%;color:#E9EB5D'><i>candidates</i></span></div>
+</layer></div>
+</layer></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face="Times New Roman" size=4><b>Evaluating
+   candidate genes (CHECKED BOXES) responsible for variability in APP
+   expression:</b></font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face="Times New Roman" size=4>A large number
+   of genes are usually in the QTL interval and are therefore POSITIONAL
+   CANDIDATES, but they will differ greatly in their biological and
+   bioinformatic plausibility. Assume that the QTL has been located between 119
+   and 131 Mb (12 Mb). There will typically be 12 to 15 genes per Mb, so we
+   might need to evaluate several hundred positional candidates. In this
+   particular case there are about 100 known genes in this interval. Eight of
+   these are highlighted in the table above with check marks in the boxes to
+   the left.<span style="mso-spacerun: yes">&nbsp; </span>We need to highlight
+   and objectively score the biologically relevant subset of all 100 positional
+   candidate genes. We could look through gene ontologies and expression levels
+   to help us shorten the list. An alternate way available using WebQTL is to
+   generate a list of those genes in this interval that have transcripts that
+   co-vary in expression with App expression. That is what the table shows.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face="Times New Roman" size=4>Notes:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face="Times New Roman" size=4>1. To replicate
+   this table go back to the Trait Data and Analysis Form. Choose to sort
+   correlations by POSITION and select RETURN = 500. Then scroll down the list
+   to Chr 7 and review the subset of positional candidates that share
+   expression with App. You should see a list similar to that shown above.
+   Gtf3c1 is a good biological candidate and has a high covariation in
+   expression with App.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face="Times New Roman" size=4>2. Caveat:<span
+   style="mso-spacerun: yes">&nbsp;&nbsp; </span>Of course, the gene or genes
+   that control App expression may not be in this list. A protein coding
+   difference might be the ultimate cause of variation in App transcript level
+   and the expression covariation might be close to zero. Our list may also
+   simply be missing the right transcript since the microarray is not truly
+   comprehensive. Furthermore, even if the list contains the QT gene, an
+   expression difference may only have been expressed early in development or
+   even in another tissue such as liver. While it is important to recognize
+   these caveats, it is equally important to devise a rational way to rank
+   candidates given existing data. Coexpression is one of several criteria used
+   to evaluate positional candidates. We will see others in the next slide.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face="Times New Roman" size=4>3. We can also
+   assess the likelihood that candidates contain functional polymorphism in
+   promoters and enhancers that affect their expression simply by mapping the
+   transcripts of all candidate genes to see if they �map back� to the location
+   of gene itself. A transcript that maps to its own location is referred to as
+   a cis QTL. We essentially ask: Which of the the transcripts listed in the
+   Correlation Table above (from Gtf3c1 to Zranb1) has variation in expression
+   that maps to Chr 7 at about 120 Mb?<span style="mso-spacerun: yes">&nbsp;
+   </span>The logic of this search is that if a gene controls the level of its
+   own expression it is also much more likely to generate other downstream
+   effects. The Gtf3c1 transcript is a weak cis QTL with a local LRS maximum of
+   about 7.0 (D alleles are high). That is just about sufficient to declare it
+   to be a cis QTL. [No whole genome correction is required and a point-wise
+   p-value of 0.05 is the appropriate test. A p-value of 0.05 is roughly
+   equivalent to an LRS of 6.0 (LOD = 1.3).]</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0057.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0057.htm
new file mode 100755
index 00000000..dcc5ede7
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@@ -0,0 +1,115 @@
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+<head>
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+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
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+wd =   g_width;
+document.write(
+'<img src="master03_background.png" height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.08 * g_height; mywidth = 1.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.98 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:"-358 0 -1";mso-margin-left-alt:233;
+mso-text-indent-alt:0;mso-line-spacing:"-358 0 -1";mso-margin-left-alt:233;
+mso-text-indent-alt:0'><span style='font-family:Verdana;font-size:64%'>Physical
+maps are zoomable</span><span style='font-family:Verdana;font-size:73%;
+mso-special-format:lastCR;display:none'><i><br>
+</i></span></div>
+</layer></div>
+</layer><script>
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+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Even higher blow-up of
+   part of the Chr 7 physical map of variation in App expression in brain.<span
+   style="mso-spacerun: yes">&nbsp; </span>The QTL region actually extends from
+   about 119 to 129.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face="Times New Roman" size=4>Notes:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face="Times New Roman" size=4>1. As mentioned
+   in the previous slide another important approach to ranking candidates is
+   based on the number of sequence variants that distinguish the parental
+   strains. If we were sure that the sequences of the gene, its promoter, and
+   its enhancers were identical between the strains then we could discount--but
+   not eliminate--that gene as a candidate. The Gtf3c1 candidate almost falls
+   into this category: of 663 known SNPs in and around this gene, only four
+   differ between C57BL/6J and DBA/2J. Gtf3c1 is essentially
+   identical-by-descent in these strains and is a less likely candidate. In
+   contrast, if the two alleles of the gene have dozens of functional variants
+   in exons, promoters, enhancers, and splice sites, then it becomes a higher
+   priority candidate.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face="Times New Roman" size=4>Of course it
+   only takes a single critical sequence variant to generate downstream
+   effects. The argument above is really about the prior probabilities. Where
+   would you place your bets given the information at hand?</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>2.<span
+   style="mso-spacerun: yes">&nbsp; </span>If you scroll down the INTERVAL
+   ANALYST you will find that Ctbp2 is a particularly interesting candidate
+   that contains lots of SNPs (n = 75 and a SNP density of 0.55 SNP/Kb). Ctbp2
+   is also closer to our QTL peak than was Gtf3c1. Not only does Ctbp2 contain
+   lots of SNPs but it is also is associated with a powerful cis QTL with an
+   LRS of 24.2 (divide by 4.61 to get the equivalent LOD score of 5.25).</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>3.<span
+   style="mso-spacerun: yes">&nbsp; </span>At this high magnification,
+   individual genes are distinct. They are color coded by their density of
+   SNPs. Bright orange represents those genes that have a high SNP density
+   (C57BL/6J versus DBA/2J), black represents genes with low SNP density. Roll
+   the cursor over a gene block and its name will pop up, along with
+   information on exon number.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>4.<span
+   style="mso-spacerun: yes">&nbsp; </span>Beneath the physical map you will
+   find an INTERVAL ANALYST table that lists information on known genes in the
+   region on which you have zoomed the Physical Map.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>5.<span
+   style="mso-spacerun: yes">&nbsp; </span>As always: error-checking is
+   important. Some genes may be missing from the Interval Analyst (recent
+   additions or errors of omission). In this case the Zranb1 gene that is
+   located just proximal to Ctbp2 is not listed in the INTERVAL ANALYST.
+   Double-check the interval using the Genome Browser links (blue and beige
+   horizontal bars) at the top of the PHYSICAL MAP.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0058.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0058.htm
new file mode 100755
index 00000000..47e08c87
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0058.htm
@@ -0,0 +1,167 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
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+<meta name=Description
+content="Jul-18-05: Evaluating Ctbp2 as a candidate QTL for App">
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+<div><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
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+mso-text-indent-alt:0;mso-line-spacing:"-358 0 -1";mso-margin-left-alt:233;
+mso-text-indent-alt:0'><span style='font-family:Verdana;font-size:64%'>Evaluating
+</span><span style='font-family:Verdana;font-size:64%'><i>Ctbp2</i></span><span
+style='font-family:Verdana;font-size:64%'> as a candidate QTL for </span><span
+style='font-family:Verdana;font-size:64%'><i>App</i></span><span
+style='font-family:Verdana;font-size:73%;mso-special-format:lastCR;display:
+none'><i><br>
+</i></span></div>
+</layer></div>
+</layer><script>
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+<div><script language=JavaScript><!--
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+<div><script language=JavaScript><!--
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+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
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+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'>This is</span><span
+style='font-size:233%;color:#E9EB5D'><i> the </i></span></span></layer><script>
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+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'><i>Ctbp2 </i></span><span
+style='font-size:233%;color:#E9EB5D'>cis QTL, </span></span></layer><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'>but is
+detected </span></span></layer><script>
+	mytop = 0.18 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.33 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'>only in the </span></span></layer><script>
+	mytop = 0.25 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.35 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'>Rosen
+striatum </span></span></layer><script>
+	mytop = 0.31 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.33 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'>data set.</span><span
+style='font-size:233%;color:#E9EB5D;mso-special-format:lastCR;display:none'><i><br>
+</i></span></span></layer></div>
+</layer><script>
+	mytop = 0.16 * g_height; myleft = 0.56 * g_width; myheight = 0.12 * g_height; mywidth = 0.48 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.45 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'>This is</span><span
+style='font-size:233%;color:#E9EB5D'><i> the App QTL </i></span></span></layer><script>
+	mytop = 0.06 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.48 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'>in the INIA
+data set. </span><span style='font-size:233%;color:#E9EB5D;mso-special-format:
+lastCR;display:none'><i><br>
+</i></span></span></layer></div>
+</layer><script>
+	mytop = 0.39 * g_height; myleft = 0.03 * g_width; myheight = 0.53 * g_height; mywidth = 0.48 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
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+yy = 0.39 * g_height;
+ht = 0.53 * g_height;
+wd = 0.48 * g_width;
+document.write(
+'<img border=0 src="slide0027_image120.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.1 * g_height; myleft = 0.35 * g_width; myheight = 0.72 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
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+ht = 0.72 * g_height;
+wd = 0 * g_width;
+document.write(
+'<img border=0 src="slide0027_image121.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.1 * g_height; myleft = 0.31 * g_width; myheight = 0.72 * g_height; mywidth = 0 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.31 * g_width;
+yy = 0.1 * g_height;
+ht = 0.72 * g_height;
+wd = 0 * g_width;
+document.write(
+'<img border=0 src="slide0027_image122.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>This slide illustrates
+   one reason why Ctbp2 should be considered a high priority positional
+   candidate gene that may modulate the expression level of App.<span
+   style="mso-spacerun: yes">&nbsp; </span>Ctbp2 is a strong cis QTL in some
+   brain regions (here the data are taken from the striatum).<span
+   style="mso-spacerun: yes">&nbsp; </span>If Ctbp2 contains variants that
+   modulate its own expression then these expression differencess may produce
+   many downstream effects. Of course, we now want to know much more about the
+   known biology of Ctbp2. What kind of gene is it? To begin to answer that
+   question we can use a number of resources listed in the LINKS page.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Notes:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Arial size=3>1.</font><font
+   face=Verdana size=3> The App QTL is bimodal. Perhaps there are actually two
+   causal factors in this region--one close to 123 Mb and the other close to
+   127 Mb.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>2. The precision of QTL
+   mapping depends on several factors, including the effect size and
+   interactions among QTLs modulating a trait, the number of genetic
+   individuals that are studied, and the distribution of recombinations in the
+   study population.<span style="mso-spacerun: yes">&nbsp; </span>In the case
+   above, the QTL(s) are likely to be confined to the interval from 120 to 132
+   Mb. The bootstrap test (yellow bars shown in some of the previous slides)
+   can be usual for estimating the consiistency of QTL peaks.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0059.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0059.htm
new file mode 100755
index 00000000..5ba9ff5c
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+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0059.htm
@@ -0,0 +1,104 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Jul-18-05: Evaluating Ctbp2 using other resources">
+<style media=print>
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+</script><script language=JavaScript><!--
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+ LoadNavSld("slide0059.htm");
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+<div><script language=JavaScript><!--
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+wd =   g_width;
+document.write(
+'<img src="master03_background.png" height=' + ht + ' width=' + wd + '>' );
+//-->
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+</layer><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.08 * g_height; mywidth = 1.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.98 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:"-358 0 -1";mso-margin-left-alt:233;
+mso-text-indent-alt:0;mso-line-spacing:"-358 0 -1";mso-margin-left-alt:233;
+mso-text-indent-alt:0'><span style='font-family:Verdana;font-size:64%'>Evaluating
+</span><span style='font-family:Verdana;font-size:64%'><i>Ctbp2</i></span><span
+style='font-family:Verdana;font-size:64%'> using other resources</span><span
+style='font-family:Verdana;font-size:73%;mso-special-format:lastCR;display:
+none'><i><br>
+</i></span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.1 * g_height; myleft = 0.01 * g_width; myheight = 0.53 * g_height; mywidth = 0.48 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.01 * g_width;
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+'<img border=0 src="slide0028_image123.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
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+</script>
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+//-->
+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Ctbp2 should also be
+   considered a high priority biological candidate gene responsible for
+   modulating App expression levels. The<span style="mso-spacerun: yes">&nbsp;
+   </span>C-terminal binding protein 2 is a transcriptional co-repressor also
+   known as Ribeye.</font><font face=Times-Roman size=3> The gene produces two
+   transcripts encoding distinct proteins. The short form is a transcriptional
+   repressor that binds a Pro-X-Asp-Leu-Ser peptide motif common to adenoviral
+   oncoprotein E1a and a related motif in BKLF. This short form also interacts<span
+   style="mso-spacerun: yes">&nbsp; </span>with several transcription factors
+   including EVI1, ZFPM1, and<span style="mso-spacerun: yes">&nbsp;&nbsp;
+   </span>ZFHX1A (aka TCF8, deltaEF1). The longer isoform is a major component
+   of specialized synapses in photoreceptors. Both proteins contain a NAD+
+   binding domain similar to NAD+-dependent 2-hydroxyacid dehydrogenases.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Notes:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>1. To find out more about
+   CTBP2 protein and the Ctbp2 gene, link to iHOP at
+   http://www.pdg.cnb.uam.es/UniPub/iHOP/ and type in CTBP2</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>Try Arrowsmith at
+   http://arrowsmith.psych.uic.edu/cgi-test/arrowsmith_uic/pubsmith.cgi</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>2. Both APP and CTBP2 are
+   involved in oxidoreducatase activity or Notch signalling. To estabilish this
+   common gene ontology visit NCBI<span style="mso-spacerun: yes">&nbsp;
+   </span>http://www.ncbi.nih.gov/entrez/query.fcgi?db=gene<span
+   style="mso-spacerun: yes">&nbsp; </span>and enter each gene symbol.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>3. You can get intersting
+   hints regarding Ctbp2 expression partners by examining the genetic
+   correlations between Ctbp2 probe set 1422887_a_at and all other transcripts
+   on the M430 Affymetrix array. Use the Striatum data set because we already
+   know from previous work (the previous slide) that this gene is a cis
+   QTL.<span style="mso-spacerun: yes">&nbsp; </span>You should be able to show
+   that Ctbp2 and Notch3 have antagonistic expression patterns in striatum. The
+   negative genetic correlation with E2f4 is even stronger. The transcript also
+   has a high positive genetic correlation with Rdh14. Of particualr interest
+   with respect to APP protein processing, Ctbp2 covaries positiviely with
+   Bace2 (the transcript of the beta site APP-cleaving enzyme 2).</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0060.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0060.htm
new file mode 100755
index 00000000..2f1c5b7b
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0060.htm
@@ -0,0 +1,139 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
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+</script>
+<meta name=Description content=Jul-18-05>
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+function DoOnLoad() { 
+ LoadNavSld("slide0060.htm");
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+font-size:213%;mso-text-raise:0%;mso-line-spacing:"-220 0 -216";mso-margin-left-alt:
+292;mso-text-indent-alt:0;mso-line-spacing:"-220 0 -216";mso-margin-left-alt:
+292;mso-text-indent-alt:0'><span style='mso-special-format:nobullet;display:
+none;color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>Summary of Part 2:</span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.09 * g_height; myleft = 0.08 * g_width; myheight = 0.37 * g_height; mywidth = 1.02 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div>
+<layer>
+ <div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+ normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+ no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+ mso-text-raise:0%'></div>
+</layer>
+<layer>
+ <div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+ normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+ no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+ mso-text-raise:0%'></div>
+</layer>
+<layer>
+ <div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+ normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+ no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+ mso-text-raise:0%'></div>
+</layer>
+<layer>
+ <div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+ normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+ no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+ mso-text-raise:0%'></div>
+</layer>
+<script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.87 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:numbullet;font-family:Arial;text-align:left;
+font-family:Verdana;font-weight:normal;font-style:normal;text-decoration:none;
+text-shadow:none;text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;
+color:black;mso-color-index:1;font-size:80%;mso-text-raise:0%;mso-margin-left-alt:
+144;mso-margin-left-alt:144'><script>
+	mytop = 0 * g_height; myleft = 0.02 * g_width; myheight = 0.05 * g_height; mywidth = 0.84 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:numbullet;
+position:absolute;left:-2.96%;font-family:Arial'>1.</span></span><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>Covered the basics of QTL
+analysis and mapping.<br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.95 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:numbullet;font-family:Arial;text-align:left;
+font-family:Verdana;font-weight:normal;font-style:normal;text-decoration:none;
+text-shadow:none;text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;
+color:black;mso-color-index:1;font-size:80%;mso-text-raise:0%;mso-margin-left-alt:
+144;mso-margin-left-alt:144'><script>
+	mytop = 0 * g_height; myleft = 0.02 * g_width; myheight = 0.05 * g_height; mywidth = 0.92 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:numbullet;
+position:absolute;left:-2.71%;font-family:Arial'>2.</span></span><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>Reviewed difference between
+genetic and physical maps.<br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.1 * g_height; myleft = 0 * g_width; myheight = 0.15 * g_height; mywidth = 1.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:numbullet;font-family:Arial;text-align:left;
+font-family:Verdana;font-weight:normal;font-style:normal;text-decoration:none;
+text-shadow:none;text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;
+color:black;mso-color-index:1;font-size:80%;mso-text-raise:0%;mso-margin-left-alt:
+144;mso-margin-left-alt:144'><script>
+	mytop = 0 * g_height; myleft = 0.02 * g_width; myheight = 0.05 * g_height; mywidth = 0.95 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:numbullet;
+position:absolute;left:-2.62%;font-family:Arial'>3.</span></span><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>Discussed interpreting features
+of QTL maps including the </span></span></layer><script>
+	mytop = 0.05 * g_height; myleft = 0.02 * g_width; myheight = 0.05 * g_height; mywidth = 0.98 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'>LRS function, the additive effect function,
+the bootstrap bars, </span></span></layer><script>
+	mytop = 0.1 * g_height; myleft = 0.02 * g_width; myheight = 0.05 * g_height; mywidth = 0.84 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'>and the permutation thresholds.<br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.26 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 1.02 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:numbullet;font-family:Arial;text-align:left;
+font-family:Verdana;font-weight:normal;font-style:normal;text-decoration:none;
+text-shadow:none;text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;
+color:black;mso-color-index:1;font-size:80%;mso-text-raise:0%;mso-margin-left-alt:
+144;mso-margin-left-alt:144'><script>
+	mytop = 0 * g_height; myleft = 0.02 * g_width; myheight = 0.05 * g_height; mywidth = 1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:numbullet;
+position:absolute;left:-2.51%;font-family:Arial'>4.</span></span><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>Illustrated technics to
+generate a list of positional candidates.<br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.31 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.97 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:numbullet;font-family:Arial;text-align:left;
+font-family:Verdana;font-weight:normal;font-style:normal;text-decoration:none;
+text-shadow:none;text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;
+color:black;mso-color-index:1;font-size:80%;mso-text-raise:0%;mso-margin-left-alt:
+144;mso-margin-left-alt:144'><script>
+	mytop = 0 * g_height; myleft = 0.02 * g_width; myheight = 0.05 * g_height; mywidth = 0.94 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:numbullet;
+position:absolute;left:-2.65%;font-family:Arial'>5.</span></span><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>Discussed some factors used to
+evaluate candidate genes.</span></span></layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.58 * g_height; myleft = 0.05 * g_width; myheight = 0.26 * g_height; mywidth = 1.06 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 1.06 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'>What does a QTL signify? A good QTL is a claim
+that a particular </span></span></layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 1.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'>chromosomal region contains a causal source of
+variation in the </span></span></layer><script>
+	mytop = 0.1 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'>phenotype. The importance of this hypothesis
+depends on the </span></span></layer><script>
+	mytop = 0.15 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.92 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'>quality and relevance of the phenotype and the
+statistical </span></span></layer><script>
+	mytop = 0.21 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.89 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'>strength of the QTL. As usual, test and be
+skeptical.</span></span></layer></div>
+</layer></div>
+</LAYER>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0061.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0061.htm
new file mode 100755
index 00000000..a2816092
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0061.htm
@@ -0,0 +1,112 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content="Jul-18-05: Test Questions">
+<style media=print>
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+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
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+}
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+}
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+document.captureEvents(Event.KEYPRESS);
+document.onkeypress = _KPH ;
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+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0061.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
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+
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+g_left = 0;
+
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+	g_height = g_width * g_origHeight / g_origWidth;
+else
+	g_width = g_origWidth * g_height / g_origHeight;
+	
+g_top = (window.innerHeight - g_height) / 2;
+g_left = (window.innerWidth - g_width) / 2;
+
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+<div id=SlideObj class=sld style='position:relative;font-size:&{new_font_size()};'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 1 * g_height; mywidth = 1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.png" height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.08 * g_height; mywidth = 1.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.98 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:"-358 0 -1";mso-margin-left-alt:233;
+mso-text-indent-alt:0;mso-line-spacing:"-358 0 -1";mso-margin-left-alt:233;
+mso-text-indent-alt:0'><span style='font-family:Verdana;font-size:64%'>Test
+Questions</span><span style='font-family:Verdana;font-size:73%;mso-special-format:
+lastCR;display:none'><i><br>
+</i></span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.11 * g_height; myleft = 0.04 * g_width; myheight = 0.06 * g_height; mywidth = 1.08 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><span style='font-size:233%;color:#E9EB5D'>1. Evaluate
+candidates for the Chr 3 </span><span style='font-size:233%;color:#E9EB5D'><i>App</i></span><span
+style='font-size:233%;color:#E9EB5D'> QTL.</span><span style='font-size:233%;
+color:#E9EB5D;mso-special-format:lastCR;display:none'><i><br>
+</i></span></div>
+</layer><script>
+	mytop = 0.24 * g_height; myleft = 0.04 * g_width; myheight = 0.12 * g_height; mywidth = 1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'>2. Do </span><span
+style='font-size:233%;color:#E9EB5D'><i>App</i></span><span style='font-size:
+233%;color:#E9EB5D'> and </span><span style='font-size:233%;color:#E9EB5D'><i>Ctbp2</i></span><span
+style='font-size:233%;color:#E9EB5D'> expression share any </span></span></layer><script>
+	mytop = 0.06 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.94 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'>other QTLs
+beside that on Chr 7?</span><span style='font-size:233%;color:#E9EB5D;
+mso-special-format:lastCR;display:none'><i><br>
+</i></span></span></layer></div>
+</layer><script>
+	mytop = 0.45 * g_height; myleft = 0.04 * g_width; myheight = 0.12 * g_height; mywidth = 1.05 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 1.02 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'>3. Can you
+exploit literature mining tools to </span></span></layer><script>
+	mytop = 0.06 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 1.05 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'>find strong
+relation between </span><span style='font-size:233%;color:#E9EB5D'><i>App</i></span><span
+style='font-size:233%;color:#E9EB5D'> and </span><span style='font-size:233%;
+color:#E9EB5D'><i>Ctbp2</i></span><span style='font-size:233%;color:#E9EB5D'>? </span><span
+style='font-size:233%;color:#E9EB5D;mso-special-format:lastCR;display:none'><i><br>
+</i></span></span></layer></div>
+</layer><script>
+	mytop = 0.66 * g_height; myleft = 0.04 * g_width; myheight = 0.12 * g_height; mywidth = 1.1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'>4. Why might
+the cis QTL for </span><span style='font-size:233%;color:#E9EB5D'><i>Ctbp2</i></span><span
+style='font-size:233%;color:#E9EB5D'> expression </span></span></layer><script>
+	mytop = 0.06 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.98 * g_width;
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+</script><span
+style='text-align:left'><span style='font-size:233%;color:#E9EB5D'>only be
+detected in the striatum data set?</span><span style='font-size:233%;
+color:#E9EB5D;mso-special-format:lastCR;display:none'><i><br>
+</i></span></span></layer></div>
+</layer></div>
+</LAYER>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0062.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0062.htm
new file mode 100755
index 00000000..6b671799
--- /dev/null
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@@ -0,0 +1,109 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
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+<meta name=Description
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+<script language=JavaScript>
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+}
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+ LoadNavSld("slide0062.htm");
+}//-->
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+</head>
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+g_left = (window.innerWidth - g_width) / 2;
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+wd =   g_width;
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+<div><script>
+	mytop = 0.01 * g_height; myleft = 0.01 * g_width; myheight = 0.06 * g_height; mywidth = 0.92 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
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+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
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+mso-text-raise:0%;mso-line-spacing:"-358 0 -1";mso-line-spacing:"-358 0 -1"'><span
+style='font-size:73%'><i>Contact for comments and improvements:</i></span><span
+style='font-size:82%;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.16 * g_height; myleft = 0.06 * g_width; myheight = 0.24 * g_height; mywidth = 0.9 * g_width;
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+<div><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:"-358 0 -1";mso-line-spacing:"-358 0 -1"'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.87 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:82%'>rwilliam@nb.utmem.edu<br>
+</span></span></layer><script>
+	mytop = 0.08 * g_height; myleft = 0.04 * g_width; myheight = 0.07 * g_height; mywidth = 0.83 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:82%'><br>
+</span></span></layer><script>
+	mytop = 0.16 * g_height; myleft = 0.04 * g_width; myheight = 0.07 * g_height; mywidth = 0.83 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:82%;mso-special-format:lastCR;
+display:none'><br>
+</span></span></layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.27 * g_height; myleft = 0.09 * g_width; myheight = 0.07 * g_height; mywidth = 0.5 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><span style='font-family:"Gill Sans";font-size:300%;
+color:#E9EB5D'>kmanly@utmem.edu</span></div>
+</layer><script>
+	mytop = 0.83 * g_height; myleft = 0.04 * g_width; myheight = 0.1 * g_height; mywidth = 1.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.98 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D'>The </span><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D'><i>App</i></span><span style='font-family:"Gill Sans";
+font-size:200%;color:#E9EB5D'> findings reviewed in this presentation are part
+of an </span></span></layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 1.01 * g_width;
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+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D'>ongoing study of R. Wiliams and R. Homayouni (July 15, 2005)</span><span
+style='font-family:"Gill Sans";font-size:300%;color:#E9EB5D;mso-special-format:
+lastCR;display:none'><br>
+</span></span></layer></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>END</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0063.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0063.htm
new file mode 100755
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--- /dev/null
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@@ -0,0 +1,34 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content="Jul-18-05: GeneNetwork and WebQTL:">
+<style media=print>
+<!--.sld
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+<script language=JavaScript src=script.js></script><script language=JavaScript>
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+function restore() {
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+}
+</script>
+<script language=JavaScript>
+function flatLoad() {
+if ( !parent.IsFullScrMode() )
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+DoOnLoad();
+  	
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+      if ( parent.IsFullScrMode() && parent.NavPopup && !parent.NavPopup.closed )
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+      	else	
+  		self.focus();
+  	parent.base.SldUpdated( "slide0063.htm" );
+ } 	
+ </script><script language=JavaScript><!--
+function DoOnLoad() { 
+ }//-->
+</script>
+</head>
+<body bgcolor="#000000" onresize="restore()" onload="flatLoad()"
+onclick="DocumentOnClick(event)" onkeypress="_KPH(event)">
+<center><img src=Slide0001.gif border=0 usemap="#Slide0001.gif_map"></center>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0064.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0064.htm
new file mode 100755
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--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0064.htm
@@ -0,0 +1,34 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jul-18-05>
+<style media=print>
+<!--.sld
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+<script language=JavaScript src=script.js></script><script language=JavaScript>
+	if ( parent.base.msie < 0 ) {
+	  	document.captureEvents(Event.MOUSEDOWN);
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+  		
+function restore() {
+	if ( parent.base.msie < 0 ) 
+		self.location.reload();
+}
+</script>
+<script language=JavaScript>
+function flatLoad() {
+if ( !parent.IsFullScrMode() )
+	parent.base.highlite();
+DoOnLoad();
+  	
+      
+      if ( parent.IsFullScrMode() && parent.NavPopup && !parent.NavPopup.closed )
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+  		self.focus();
+  	parent.base.SldUpdated( "slide0064.htm" );
+ } 	
+ </script><script language=JavaScript><!--
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+onclick="DocumentOnClick(event)" onkeypress="_KPH(event)">
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+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0065.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0065.htm
new file mode 100755
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--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0065.htm
@@ -0,0 +1,34 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jul-18-05>
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
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+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript>
+	if ( parent.base.msie < 0 ) {
+	  	document.captureEvents(Event.MOUSEDOWN);
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+function restore() {
+	if ( parent.base.msie < 0 ) 
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+}
+</script>
+<script language=JavaScript>
+function flatLoad() {
+if ( !parent.IsFullScrMode() )
+	parent.base.highlite();
+DoOnLoad();
+  	
+      
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+  		self.focus();
+  	parent.base.SldUpdated( "slide0065.htm" );
+ } 	
+ </script><script language=JavaScript><!--
+function DoOnLoad() { 
+ }//-->
+</script>
+</head>
+<body bgcolor="#000000" onresize="restore()" onload="flatLoad()"
+onclick="DocumentOnClick(event)" onkeypress="_KPH(event)">
+<center><img src=Slide0003.gif border=0 usemap="#Slide0003.gif_map"></center>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0066.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0066.htm
new file mode 100755
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--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0066.htm
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+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content="Jul-18-05: Search results">
+<style media=print>
+<!--.sld
+	{left:0px !important;
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+<script language=JavaScript src=script.js></script><script language=JavaScript>
+	if ( parent.base.msie < 0 ) {
+	  	document.captureEvents(Event.MOUSEDOWN);
+  		document.captureEvents(Event.KEYPRESS);
+  		document.onkeypress = _KPH;
+  		document.onmousedown = _KPH;
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+  		
+function restore() {
+	if ( parent.base.msie < 0 ) 
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+<script language=JavaScript>
+function flatLoad() {
+if ( !parent.IsFullScrMode() )
+	parent.base.highlite();
+DoOnLoad();
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+</html>
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diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0067.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0067.htm
new file mode 100755
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--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0067.htm
@@ -0,0 +1,34 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
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+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Jul-18-05>
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diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0072.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0072.htm
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+}
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+}
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+<link title="Presentation File" type="application/powerpoint" rel=alternate
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+}
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+<link title="Presentation File" type="application/powerpoint" rel=alternate
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diff --git a/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0075.htm b/web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0075.htm
new file mode 100755
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+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
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+<link title="Presentation File" type="application/powerpoint" rel=alternate
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+<script>
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+}
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+<script language=JavaScript src=script.js></script><script language=JavaScript>
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+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
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+<link title="Presentation File" type="application/powerpoint" rel=alternate
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+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/Slide0011.gif
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/Slide0012.gif b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/Slide0012.gif
new file mode 100755
index 00000000..f362d236
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/Slide0012.gif
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/Slide0013.gif b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/Slide0013.gif
new file mode 100755
index 00000000..611b1a50
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/Slide0013.gif
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/Slide0014.gif b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/Slide0014.gif
new file mode 100755
index 00000000..4a222157
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/Slide0014.gif
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/Slide0015.gif b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/Slide0015.gif
new file mode 100755
index 00000000..a43a4e09
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/Slide0015.gif
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/Slide0016.gif b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/Slide0016.gif
new file mode 100755
index 00000000..c7c9c4d2
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/Slide0016.gif
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/Slide0017.gif b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/Slide0017.gif
new file mode 100755
index 00000000..a05bcf40
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/Slide0017.gif
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/Slide0018.gif b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/Slide0018.gif
new file mode 100755
index 00000000..014d8569
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/Slide0018.gif
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/Slide0019.gif b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/Slide0019.gif
new file mode 100755
index 00000000..782076fa
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/Slide0019.gif
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/blank_notes.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/blank_notes.htm
new file mode 100755
index 00000000..e833eefd
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/blank_notes.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black topmargin=0 leftmargin=0>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/endshow.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/endshow.htm
new file mode 100755
index 00000000..a2ed520a
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/endshow.htm
@@ -0,0 +1 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+</head>
+<body bgcolor=black>
+<center>
+<p><font face=Arial color=white size=2><br>
+<b>Open the default .htm file to view this Web presentation.</b></font></p>
+</center>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/error.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/error.htm
new file mode 100755
index 00000000..f2002169
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/error.htm
@@ -0,0 +1 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+</head>
+<body bgcolor=black>
+<center>
+<p><font face=Arial color=white size=2><br>
+<b>This presentation contains content that your browser is unable to display. This presentation was optimized for the recent version of Microsoft Internet Explorer and Netscape Navigator 4.</b></font></p>
+</center>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/filelist.xml b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/filelist.xml
new file mode 100755
index 00000000..4a47f1fe
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/filelist.xml
@@ -0,0 +1 @@
+<xml xmlns:o="urn:schemas-microsoft-com:office:office">
+ <o:File HRef="master03.htm"/>
+ <o:File HRef="master02.htm"/>
+ <o:File HRef="slide0001.htm"/>
+ <o:File HRef="master03_background.png"/>
+ <o:File HRef="slide0001_image001.png"/>
+ <o:File HRef="slide0002.htm"/>
+ <o:File HRef="slide0002_image002.png"/>
+ <o:File HRef="slide0002_image003.png"/>
+ <o:File HRef="slide0002_image004.png"/>
+ <o:File HRef="slide0003.htm"/>
+ <o:File HRef="slide0003_image005.png"/>
+ <o:File HRef="slide0003_image006.png"/>
+ <o:File HRef="slide0003_image008.png"/>
+ <o:File HRef="slide0003_image009.png"/>
+ <o:File HRef="slide0004.htm"/>
+ <o:File HRef="slide0004_image010.png"/>
+ <o:File HRef="slide0004_image012.png"/>
+ <o:File HRef="slide0005.htm"/>
+ <o:File HRef="slide0005_image013.png"/>
+ <o:File HRef="slide0005_image014.png"/>
+ <o:File HRef="slide0006.htm"/>
+ <o:File HRef="slide0006_image015.png"/>
+ <o:File HRef="slide0007.htm"/>
+ <o:File HRef="slide0007_image016.png"/>
+ <o:File HRef="slide0007_image017.png"/>
+ <o:File HRef="slide0008.htm"/>
+ <o:File HRef="slide0008_image018.png"/>
+ <o:File HRef="slide0008_image019.png"/>
+ <o:File HRef="slide0008_image021.png"/>
+ <o:File HRef="slide0009.htm"/>
+ <o:File HRef="slide0009_image022.png"/>
+ <o:File HRef="slide0010.htm"/>
+ <o:File HRef="slide0010_image023.png"/>
+ <o:File HRef="slide0010_image024.png"/>
+ <o:File HRef="slide0011.htm"/>
+ <o:File HRef="slide0011_image025.png"/>
+ <o:File HRef="slide0012.htm"/>
+ <o:File HRef="slide0012_image026.png"/>
+ <o:File HRef="slide0013.htm"/>
+ <o:File HRef="slide0013_image027.png"/>
+ <o:File HRef="slide0014.htm"/>
+ <o:File HRef="slide0014_image029.png"/>
+ <o:File HRef="slide0014_image031.png"/>
+ <o:File HRef="slide0014_image033.png"/>
+ <o:File HRef="slide0015.htm"/>
+ <o:File HRef="slide0015_image034.png"/>
+ <o:File HRef="slide0015_image035.png"/>
+ <o:File HRef="slide0016.htm"/>
+ <o:File HRef="slide0016_image036.png"/>
+ <o:File HRef="slide0017.htm"/>
+ <o:File HRef="slide0018.htm"/>
+ <o:File HRef="master03_stylesheet.css"/>
+ <o:File HRef="slide0019.htm"/>
+ <o:File HRef="slide0020.htm"/>
+ <o:File HRef="slide0021.htm"/>
+ <o:File HRef="slide0022.htm"/>
+ <o:File HRef="slide0023.htm"/>
+ <o:File HRef="slide0024.htm"/>
+ <o:File HRef="slide0025.htm"/>
+ <o:File HRef="slide0026.htm"/>
+ <o:File HRef="slide0027.htm"/>
+ <o:File HRef="slide0028.htm"/>
+ <o:File HRef="slide0029.htm"/>
+ <o:File HRef="slide0030.htm"/>
+ <o:File HRef="slide0031.htm"/>
+ <o:File HRef="slide0032.htm"/>
+ <o:File HRef="slide0033.htm"/>
+ <o:File HRef="slide0034.htm"/>
+ <o:File HRef="slide0035.htm"/>
+ <o:File HRef="slide0036.htm"/>
+ <o:MainFile HRef="::webqtl_demo2_part1.ppt.htm"/>
+ <o:File HRef="error.htm"/>
+ <o:File HRef="frame.htm"/>
+ <o:File HRef="next_active.gif"/>
+ <o:File HRef="next_disabled.gif"/>
+ <o:File HRef="prev_active.gif"/>
+ <o:File HRef="prev_disabled.gif"/>
+ <o:File HRef="outline_collapse.gif"/>
+ <o:File HRef="outline_expand.gif"/>
+ <o:File HRef="notes_flag.gif"/>
+ <o:File HRef="fullscr.gif"/>
+ <o:File HRef="fullscrClose.gif"/>
+ <o:File HRef="narration.gif"/>
+ <o:File HRef="navbg.gif"/>
+ <o:File HRef="outline.gif"/>
+ <o:File HRef="space.gif"/>
+ <o:File HRef="blank_notes.htm"/>
+ <o:File HRef="endshow.htm"/>
+ <o:File HRef="navigation_bar.htm"/>
+ <o:File HRef="fullscreen.htm"/>
+ <o:File HRef="fs_navigation_bar.htm"/>
+ <o:File HRef="outline_navigation_bar.htm"/>
+ <o:File HRef="outline_collapsed.htm"/>
+ <o:File HRef="outline_expanded.htm"/>
+ <o:File HRef="slide0001_notes_pane.htm"/>
+ <o:File HRef="slide0002_notes_pane.htm"/>
+ <o:File HRef="slide0003_notes_pane.htm"/>
+ <o:File HRef="slide0004_notes_pane.htm"/>
+ <o:File HRef="slide0005_notes_pane.htm"/>
+ <o:File HRef="slide0006_notes_pane.htm"/>
+ <o:File HRef="slide0007_notes_pane.htm"/>
+ <o:File HRef="slide0008_notes_pane.htm"/>
+ <o:File HRef="slide0009_notes_pane.htm"/>
+ <o:File HRef="slide0010_notes_pane.htm"/>
+ <o:File HRef="slide0011_notes_pane.htm"/>
+ <o:File HRef="slide0012_notes_pane.htm"/>
+ <o:File HRef="slide0013_notes_pane.htm"/>
+ <o:File HRef="slide0014_notes_pane.htm"/>
+ <o:File HRef="slide0015_notes_pane.htm"/>
+ <o:File HRef="slide0016_notes_pane.htm"/>
+ <o:File HRef="slide0018_notes_pane.htm"/>
+ <o:File HRef="slide0037.htm"/>
+ <o:File HRef="slide0038.htm"/>
+ <o:File HRef="slide0039.htm"/>
+ <o:File HRef="slide0040.htm"/>
+ <o:File HRef="slide0041.htm"/>
+ <o:File HRef="slide0042.htm"/>
+ <o:File HRef="slide0043.htm"/>
+ <o:File HRef="slide0044.htm"/>
+ <o:File HRef="slide0045.htm"/>
+ <o:File HRef="slide0046.htm"/>
+ <o:File HRef="slide0047.htm"/>
+ <o:File HRef="slide0048.htm"/>
+ <o:File HRef="slide0049.htm"/>
+ <o:File HRef="slide0050.htm"/>
+ <o:File HRef="slide0051.htm"/>
+ <o:File HRef="slide0052.htm"/>
+ <o:File HRef="slide0053.htm"/>
+ <o:File HRef="slide0054.htm"/>
+ <o:File HRef="script.js"/>
+ <o:File HRef="filelist.xml"/>
+</xml>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/frame.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/frame.htm
new file mode 100755
index 00000000..2981fa86
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/frame.htm
@@ -0,0 +1,43 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script><script language=JavaScript><!--
+base = parent;//-->
+</script><script language=JavaScript src=script.js></script>
+</head>
+<script> <!--
+function getSlideName() {
+	return parent.GetHrefObj( parent.g_currentSlide ).m_slideHref;
+}
+
+function getNotesName() {
+	return parent.GetHrefObj( parent.g_currentSlide ).m_notesHref;
+}
+
+function restore() {
+	self.location.reload();
+}
+
+function WriteMe() {
+	if ( true )
+ 	  document.write( '<frameset cols=\"20%,*\" id=PPTHorizAdjust >' +
+	  '<frame src=\"outline_collapsed.htm\" name=PPTOtl>' );
+	  var distribution;
+	if ( parent.includeNotes ) 
+		distribution = "*,20%";
+	else 
+		distribution = "*,0";		
+	document.write('<frameset rows=\"' + distribution + '\" id=PPTVertAdjust >' +
+	'<frame src=' + getSlideName() + ' name=PPTSld>' +
+	'<frame src=' + getNotesName() + ' name=PPTNts>' );
+	document.write('</frameset>');
+	if ( true )
+	  document.write(' </frameset>' );
+}
+
+if ( parent.msie < 0 ) {
+	self.onresize = restore;
+}
+
+WriteMe();
+//-->
+</script>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/fs_navigation_bar.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/fs_navigation_bar.htm
new file mode 100755
index 00000000..2b5174d1
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/fs_navigation_bar.htm
@@ -0,0 +1,84 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<title>Navigation Bar</title>
+<script>
+<!--
+function restore() {
+if( navigator.platform != "MacPPC" )
+	self.location.reload();
+}
+	mainWin = parent.base;
+	dad = parent;
+function WriteBody()
+{
+   if( window.name != "PPTNav" ) return;
+	
+  document.writeln( '<table border=0 valign=top cellpadding=0 cellspacing=0 height=100% width=100%> <tr>  <td align=center valign=top> <table border=0 valign=top cellpadding=0 cellspacing=0 height=100%><tr><td align=right valign=top>' );
+ if ( dad.g_hideNav != 1 ) {
+  innerText = "";
+  if ( mainWin.GetHrefObj( mainWin.g_currentSlide ).m_origVisibility == 1 && !mainWin.g_allHidden)
+    innerText = "Slide " + mainWin.GetCurrentSlideNum() + " of " + mainWin.GetNumSlides();
+  else
+    innerText = "Hidden Slide";
+  if( dad.gIsEndShow )
+  	innerText = "End of Slide Show";
+  	  
+fEnable = dad.M_HasPrevSld();
+  if( false || fEnable )
+  {
+    prevBtn = "prev_active.gif";
+    document.write( '<a onclick="if(event) event.cancelBubble=true"  href="javascript:dad.M_GoPrevSld()" >' );
+  }
+  else
+    prevBtn = "prev_disabled.gif";
+  
+  document.write( '<img src="' + prevBtn + '" border=0 alt="Previous Slide" title="Previous Slide">' );
+
+var textAlign;
+ if ( false )
+ 	textAlign = 'top';
+ else
+ 	textAlign = 'center';
+ 		
+  if( false || fEnable )
+    document.write( '</a>' );
+
+  document.write( '</td><td align=center valign=' + textAlign + '> &nbsp &nbsp <font face=\"Arial\" color=#000000 size=2>' + innerText + '</font>  &nbsp &nbsp </td><td align=left valign=top>' );
+
+
+fEnable = (!dad.gIsEndShow && mainWin.EndSlideShow) || (!mainWin.EndSlideShow &&( mainWin.GetCurrentSlideNum() != mainWin.GetNumSlides() ) );
+  if(  false || fEnable )
+  {
+    nextBtn = "next_active.gif";
+    document.write( '<a onclick="if(event) event.cancelBubble=true"  href="javascript:dad.M_GoNextSld()" >' );
+  }
+  else
+    nextBtn = "next_disabled.gif";
+  document.write( '<img src="' + nextBtn + '" border=0 alt="Next Slide" title="Next Slide">' );
+
+  if( false ||  fEnable )
+    document.write( '</a>' );
+  document.write( '</td> </tr></table> </td>  <td align=right valign=top>' );
+  document.write( '<a onclick="if(event) event.cancelBubble=true"  href="javascript:mainWin.CloseFullScreen()" > ' );
+   document.write( '<img src="fullscrClose.gif"border=0 alt="Close" title="Close">');
+   document.write( ' </a>' );
+  }
+  document.write( '</td> </tr></table>' );
+}
+if ( mainWin.msie < 0 ) {
+	document.captureEvents(Event.MOUSEDOWN);
+	document.onmousedown = handleClick;
+}
+
+function handleClick(event) {
+	if ( event.which == 3 )
+		return false;
+	return true;
+}
+//-->
+</script>
+
+</head>
+<body background=navbg.gif topmargin=2 onresize="restore()" scroll="no" 
+onkeypress="parent.processNavKPH(event)" onclick="parent.processNavClick()"oncontextmenu="parent.processNavClick(); return false">
+<center><script language=JavaScript><!--
+WriteBody();//-->
+</script></center>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/fullscr.gif b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/fullscr.gif
new file mode 100755
index 00000000..85842700
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/fullscr.gif
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/fullscrClose.gif b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/fullscrClose.gif
new file mode 100755
index 00000000..ccd0de13
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/fullscrClose.gif
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/fullscreen.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/fullscreen.htm
new file mode 100755
index 00000000..d562e618
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/fullscreen.htm
@@ -0,0 +1,48 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! opener.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script><script language=JavaScript src=script.js></script><script language=JavaScript><!--
+var SCREEN_MODE = "FullScreen";
+ base = self;
+ g_fullscrMode = 1;LoadHTMLVersion();
+//-->
+</script>
+</head>
+<script> <!--
+closing = false;
+PPTPRESENTATION = 1;
+function getSlideName() {
+	return opener.GetHrefObj( g_currentSlide ).m_slideHref;
+}
+function initpopup() {
+	if ( base.msie < 0 )
+		NavPopup = window.open(  "fs_navigation_bar.htm", "controls", "alwaysRaised=yes,WIDTH=300,HEIGHT=50");
+	else	
+		NavPopup = window.open( "fs_navigation_bar.htm", "controls", "WIDTH=300,HEIGHT=50");
+	NavPopup.focus();
+}
+
+
+function WriteMe() {
+	document.write( '<frameset rows=\" *,35 \" frameborder=0> '  +
+	' ' + 
+	'<frame src=\"' + getSlideName() + '\" name=PPTSld marginheight=0  marginwidth=0 scrolling=no noresize> ' +
+	' <frame src="fs_navigation_bar.htm" name=PPTNav marginheight=0 marginwidth=0 scrolling=no noresize>  ' +
+	'</frameset>' );
+	window.focus();
+}
+
+function shutdown( ) {
+if ( ! closing )
+
+	if ( window.NavPopup && !window.NavPopup.closed )
+		window.NavPopup.close();
+}
+
+WriteMe();
+// initpopup();
+
+
+	self.onunload = shutdown;
+	
+//-->
+</script>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/master02.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/master02.htm
new file mode 100755
index 00000000..2eebab33
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/master02.htm
@@ -0,0 +1,11 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
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+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/outline.gif
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/outline_collapse.gif b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/outline_collapse.gif
new file mode 100755
index 00000000..4c804d69
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/outline_collapse.gif
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/outline_collapsed.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/outline_collapsed.htm
new file mode 100755
index 00000000..5da9503b
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/outline_collapsed.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Robots content=NoIndex>
+<style>
+<!--a {text-decoration: none;}-->
+</style>
+</head>
+<body bgcolor=black text=white link=white vlink=white alink=white
+onload=" parent.base.highlite();" onresize="self.location.reload();">
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID1 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p1" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('1')" id=AREF>GeneNetwork and WebQTL:</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID2 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p2" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('2')" id=AREF>Slide 2</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID3 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p3" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('3')" id=AREF>Slide 3</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID4 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p4" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('4')" id=AREF><font face="Gill Sans">Search
+  results</font></a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID5 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p5" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('5')" id=AREF>&quot;First page of data:&quot;</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID6 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p6" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('6')" id=AREF>&quot;Data sources:&quot;</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID7 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p7" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('7')" id=AREF>&quot;Expression estimates
+  for App on...&quot;</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID8 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p8" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('8')" id=AREF>&quot;Critiquing the App
+  data the...&quot;</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID9 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p9" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('9')" id=AREF>&quot;App expression after
+  windsorizing&quot;</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID10 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p10" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('10')" id=AREF>&quot;Discovering shared
+  expression patterns&quot;</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID11 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p11" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('11')" id=AREF>&quot;Transcript
+  neighborhoods&quot;</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID12 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p12" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('12')" id=AREF>&quot;App and Atcay
+  transcript scatterplot&quot;</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID13 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p13" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('13')" id=AREF>&quot;App transcript and
+  eight of...&quot;</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID14 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p14" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('14')" id=AREF>App transcript coexpression
+  neighborhood</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID15 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p15" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('15')" id=AREF>&quot;Correlations of App
+  with classical...&quot;</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID16 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p16" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('16')" id=AREF>&quot;Network Graph of App
+  with...&quot;</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID17 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p17" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('17')" id=AREF>&quot;Summary of Part 1:&quot;</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID18 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p18" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('18')" id=AREF>Contact for comments and
+  improvements:</a></b></font></td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/outline_expand.gif b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/outline_expand.gif
new file mode 100755
index 00000000..c8c72b13
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/outline_expand.gif
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/outline_expanded.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/outline_expanded.htm
new file mode 100755
index 00000000..a45e9c0c
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/outline_expanded.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Robots content=NoIndex>
+<style>
+<!--a {text-decoration: none;}-->
+</style>
+</head>
+<body bgcolor=black text=white link=white vlink=white alink=white
+onload=" parent.base.highlite();" onresize="self.location.reload();">
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID1 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p1" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('1')" id=AREF>GeneNetwork and WebQTL:</a></b></font></td>
+ </tr>
+</table>
+<table>
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>Part 1: How to study expression
+  variation and covariation (slides 2&#8211;16)</font></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>Part 2. Discovering upstream modulators
+  (slides 17&#8211;30)</font></td>
+ </tr>
+</table>
+<br>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID2 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p2" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('2')" id=AREF>Slide 2</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID3 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p3" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('3')" id=AREF>Slide 3</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID4 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p4" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('4')" id=AREF><font face="Gill Sans">Search
+  results</font></a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID5 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p5" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('5')" id=AREF>&quot;First page of data:&quot;</a></b></font></td>
+ </tr>
+</table>
+<table>
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>First page of data: The Trait Data and
+  Analysis Form</font></td>
+ </tr>
+</table>
+<br>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID6 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p6" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('6')" id=AREF>&quot;Data sources:&quot;</a></b></font></td>
+ </tr>
+</table>
+<table>
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>Data sources: Metadata for each
+  resource</font></td>
+ </tr>
+</table>
+<br>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID7 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p7" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('7')" id=AREF>&quot;Expression estimates
+  for App on...&quot;</a></b></font></td>
+ </tr>
+</table>
+<table>
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>Expression estimates for App on the
+  Trait Data form</font></td>
+ </tr>
+</table>
+<br>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID8 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p8" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('8')" id=AREF>&quot;Critiquing the App
+  data the...&quot;</a></b></font></td>
+ </tr>
+</table>
+<table>
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>Critiquing the App data the Trait Data</font></td>
+ </tr>
+</table>
+<br>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID9 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p9" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('9')" id=AREF>&quot;App expression after
+  windsorizing&quot;</a></b></font></td>
+ </tr>
+</table>
+<table>
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>App expression after windsorizing</font></td>
+ </tr>
+</table>
+<br>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID10 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p10" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('10')" id=AREF>&quot;Discovering shared
+  expression patterns&quot;</a></b></font></td>
+ </tr>
+</table>
+<table>
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>Discovering shared expression patterns</font></td>
+ </tr>
+</table>
+<br>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID11 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p11" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('11')" id=AREF>&quot;Transcript
+  neighborhoods&quot;</a></b></font></td>
+ </tr>
+</table>
+<table>
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>Transcript neighborhoods</font></td>
+ </tr>
+</table>
+<br>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID12 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p12" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('12')" id=AREF>&quot;App and Atcay
+  transcript scatterplot&quot;</a></b></font></td>
+ </tr>
+</table>
+<table>
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>App and Atcay transcript scatterplot</font></td>
+ </tr>
+</table>
+<br>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID13 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p13" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('13')" id=AREF>&quot;App transcript and
+  eight of...&quot;</a></b></font></td>
+ </tr>
+</table>
+<table>
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>App transcript and eight of its
+  neighbors</font></td>
+ </tr>
+</table>
+<br>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID14 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p14" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('14')" id=AREF>App transcript coexpression
+  neighborhood</a></b></font></td>
+ </tr>
+</table>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID15 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p15" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('15')" id=AREF>&quot;Correlations of App
+  with classical...&quot;</a></b></font></td>
+ </tr>
+</table>
+<table>
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>Correlations of App with classical
+  traits</font></td>
+ </tr>
+</table>
+<br>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID16 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p16" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('16')" id=AREF>&quot;Network Graph of App
+  with...&quot;</a></b></font></td>
+ </tr>
+</table>
+<table>
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>Network Graph of App with classical
+  traits</font></td>
+ </tr>
+</table>
+<br>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID17 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p17" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('17')" id=AREF>&quot;Summary of Part 1:&quot;</a></b></font></td>
+ </tr>
+</table>
+<table>
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td colspan=1><font face=Arial size=2>Summary of Part 1:</font></td>
+ </tr>
+</table>
+<br>
+<table  width=100%>
+ <tr>
+  <td width=1 ><script> if ( parent.base.isnav ) { document.write('<ilayer id= LAYERID18 VISIBILITY=hidden >&gt;</ilayer>'); } </script></td>
+  <td width=100%  id="p18" ><font face=Arial size=2><b><a
+  href="javascript:parent.base.Slide('18')" id=AREF>Contact for comments and
+  improvements:</a></b></font></td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/outline_navigation_bar.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/outline_navigation_bar.htm
new file mode 100755
index 00000000..f47a3707
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/outline_navigation_bar.htm
@@ -0,0 +1,37 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script><script language=JavaScript><!--
+
+function restore() {
+if( navigator.platform != "MacPPC" )
+	self.location.reload();
+}
+
+function writebody() {
+
+	if ( parent.g_showoutline ) {
+			document.write('<table border=0 valign=top cellspacing=0 width=\"100%\">' + 
+			'<tr valign=top><td align=left valign=top>' );
+			  document.write( '<a href=\"javascript:parent.ToggleOutline()\" ><img src=\"outline.gif\" title=\"Show/Hide Outline\" alt=\"Show/Hide Outline\" border=0></a>' );
+			  document.write( '</td>' );
+		if( parent.g_outline_href == parent.OUTLINE_EXPAND_HREF ) {
+			document.write( '<td align=right valign=top><a href=\"javascript:parent.CollapseOutline()\">' +
+			'<img src="outline_collapse.gif" title="Collapse Outline" alt="Collapse Outline" border=0>' +  
+			'</a></td>');
+		} else {
+			document.write('<td align=right valign=top><a href=\"javascript:parent.ExpandOutline()\">' +
+			'<img src="outline_expand.gif" title="Expand Outline" alt="Expand Outline" border=0>' + 
+			 '</a></td>');
+		}
+		document.write("</tr></table>");
+	}
+	else {
+			document.write( '<table border=0 valign=top cellspacing=0 width=\"100%\"><td align=\"left\"><a href=\"javascript:parent.ToggleOutline()\" ><img border=0 src=\"outline.gif\" title=\"Show/Hide Outline\" alt=\"Show/Hide Outline\"></a></td></table>' );
+	}
+}//-->
+</script>
+</head>
+<body background=navbg.gif topmargin=1 onresize="restore()" scroll="no" >
+<script language=JavaScript><!--
+writebody();
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/prev_active.gif b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/prev_active.gif
new file mode 100755
index 00000000..004a872f
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/prev_active.gif
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/prev_disabled.gif b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/prev_disabled.gif
new file mode 100755
index 00000000..8a467185
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/prev_disabled.gif
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/script.js b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/script.js
new file mode 100755
index 00000000..7c9fb703
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/script.js
@@ -0,0 +1,1351 @@
+var CtxAlwaysOn = false;
+function LoadSld( slideId )
+{
+	if( !g_supportsPPTHTML ) return
+	if( slideId )
+		parent.base.SldUpdated(slideId)
+	g_origSz=parseInt(SlideObj.style.fontSize)
+	g_origH=SlideObj.style.posHeight
+	g_origW=SlideObj.style.posWidth
+	g_scaleHyperlinks=(document.all.tags("AREA").length>0)
+	if ( IsWin("PPTSld") && !parent.IsFullScrMode() )
+		parent.base.highlite();	
+	if( g_scaleHyperlinks )
+		InitHLinkArray()
+	if( g_scaleInFrame||(IsWin("PPTSld") && parent.IsFullScrMode() ) )
+		document.body.scroll="no"
+	_RSW()
+	if( IsWin("PPTSld") && (parent.IsFullScrMode() || CtxAlwaysOn ) )	{
+		document.oncontextmenu=parent._CM;
+	self.focus(); 
+
+	}
+}
+function MakeSldVis( fTrans ) 
+{
+	fTrans=fTrans && g_showAnimation
+	if( fTrans )
+	{
+		if( g_bgSound ) {
+			idx=g_bgSound.indexOf(",");
+			pptSound.src=g_bgSound.substr( 0, idx );
+			pptSound.loop= -(parseInt(g_bgSound.substr(idx+1)));
+		}
+		SlideObj.filters.revealtrans.Apply()
+	}
+	SlideObj.style.visibility="visible"
+	if( fTrans )
+		SlideObj.filters.revealtrans.Play()
+}
+function MakeNotesVis() 
+{
+	if( !IsNts() ) return false 
+	SlideObj.style.display="none"
+	nObj = document.all.item("NotesObj")
+	parent.SetHasNts(0)
+	if( nObj ) { 
+		nObj.style.display=""
+		parent.SetHasNts(1)
+	}
+	return 1
+}
+function Redirect( frmId,sId )
+{
+	var str=document.location.hash,idx=str.indexOf('#')
+	if(idx>=0) str=str.substr(1);
+	if( window.name != frmId && ( sId != str) ) {
+		obj = document.all.item("Main-File")
+		window.location.href=obj.href+"#"+sId
+		return 1
+	}
+	return 0
+}
+function HideMenu() { if( frames["PPTSld"] && PPTSld.document.all.item("ctxtmenu") && PPTSld.ctxtmenu.style.display!="none" ) { PPTSld.ctxtmenu.style.display='none'; return true } return false }
+function IsWin( name ) { return window.name == name }
+function IsNts() { return IsWin("PPTNts") }
+function IsSldOrNts() { return( IsWin("PPTSld")||IsWin("PPTNts") ) }
+function SupportsPPTAnimation() { return( navigator.platform == "Win32" && navigator.appVersion.indexOf("Windows")>0 ) }
+function SupportsPPTHTML()
+{
+	var appVer=navigator.appVersion, msie=appVer.indexOf( "MSIE " ), inex = appVer.indexOf( "Internet Explorer " ), ver=0
+	if( msie >= 0 )
+		ver=parseFloat( appVer.substring( msie+5, appVer.indexOf(";",msie) ) )
+	else if( inex >= 0 )
+		ver=parseFloat( appVer.substring( inex+18, appVer.indexOf(";",inex) ) )
+	else
+		ver=parseInt(appVer)
+
+	return( ver >= 4  )
+}
+var MHTMLPrefix = CalculateMHTMLPrefix(); 
+function CalculateMHTMLPrefix()
+{
+	if ( document.location.protocol == 'mhtml:') { 
+		href=new String(document.location.href) 
+		Start=href.indexOf('!')+1 
+		End=href.lastIndexOf('/')+1 
+		if (End < Start) 
+			return href.substring(0, Start) 
+		else 
+		return href.substring(0, End) 
+	}
+	return '';
+}
+
+function LoadNavSld(slideId) {
+playList();
+parent.createCM();
+	if( !g_supportsPPTHTML ) return
+	if( IsWin("PPTSld") && slideId )
+		parent.base.SldUpdated(slideId)
+	self.focus(); 
+
+}
+var hasNarration = false;
+function _RSW()
+{
+	if( !g_supportsPPTHTML || IsNts() ||
+	  ( !g_scaleInFrame && (( window.name != "PPTSld" ) ) ) )
+		return
+
+	cltWidth=document.body.clientWidth
+	cltHeight=document.body.clientHeight
+	factor=(1.0*cltWidth)/g_origW
+	if( cltHeight < g_origH*factor )
+		factor=(1.0*cltHeight)/g_origH
+
+	newSize = g_origSz * factor
+	if( newSize < 1 ) newSize=1
+
+	s=SlideObj.style
+	s.fontSize=newSize+"px"
+	s.posWidth=g_origW*factor
+	s.posHeight=g_origH*factor
+	s.posLeft=(cltWidth-s.posWidth)/2
+	s.posTop=(cltHeight-s.posHeight)/2
+
+	if ( hasNarration ) {
+		obj = document.all.NSPlay.style;
+		mySld = document.all.SlideObj.style;
+		obj.position = 'absolute';
+		obj.posTop = mySld.posTop + mySld.posHeight - 20;
+		obj.posLeft = mySld.posLeft + mySld.posWidth - 20;
+	}
+	if( g_scaleHyperlinks )
+		ScaleHyperlinks( factor );	
+}
+function IsMac() {
+	return (window.navigator.platform.indexOf("Mac") >= 0 );
+}
+
+function HitOK( evt ) {
+	//Nav Only function
+	return (evt.which == 1 || (IsMac() && evt.which == 3) );
+}
+function _KPH(event)
+{ 
+
+  if ( parent.base.msie < 0 )  {
+    
+    	if ( ( (event.target.name && event.target.name == "hasMap" ) || (event.target.href && event.target.href != "") ) && parent.g_docTable[0].type != "jpeg" && HitOK( event )  ) {
+    		return; /* to make hyperlinks in fullscreen mode traversable */
+    	}
+	if( IsContextMenu() )
+		return parent.KPH(event);
+  	if ( parent.IsFullScrMode()  && event.which == 27 )
+  		parent.base.CloseFullScreen();
+  	else if ( parent.base.IsFullScrMode() && ( (!IsMac() && event.which == 3) || ( IsMac() && (event.modifiers & Event.CONTROL_MASK) && event.which == 1 ) ) )
+  		return parent.KPH(event);
+  	else if( (event.which == 32) ||  (event.which == 13) || HitOK( event )  ) {
+	    if( window.name == "PPTSld" )
+	      parent.PPTSld.DocumentOnClick();
+	    else
+	      parent.M_GoNextSld();
+      }	
+      else if ( parent.IsFullScrMode() && ((event.which == 78)  || (event.which == 110) || (event.which == 29) || (event.which == 31) || (event.which == 12)) )
+  		parent.M_GoNextSld();
+      else if ( parent.IsFullScrMode() && ( (event.which == 80)  || (event.which == 112) || (event.which == 30) || (event.which == 28) || (event.which == 11) || (event.which == 8)) )
+  		parent.M_GoPrevSld();
+
+      return;
+   }
+  	
+  if( IsNts() ) return;
+
+  if(parent.IsFullScrMode()  && event.keyCode == 27 && !parent.HideMenu() )
+    parent.base.CloseFullScreen();
+  else if( (event.keyCode == 32) || (event.keyCode == 13) )
+  {
+    if( window.name == "PPTSld" )
+      parent.PPTSld.DocumentOnClick();
+   else
+      parent.M_GoNextSld();
+  }
+  else if ( parent.IsFullScrMode() && ((event.keyCode == 78)  || (event.keyCode == 110)) )
+  	parent.M_GoNextSld();
+  else if ( parent.IsFullScrMode() && ((event.keyCode == 80)  || (event.keyCode == 112)) )
+  	parent.M_GoPrevSld();
+}
+
+function DocumentOnClick(event)
+{
+		if ( g_doAdvOnClick && !parent.IsFullScrMode() ) {
+			parent.base.TP_GoToNextSld();	
+			return;
+		}
+		
+	if ( parent.base.msie < 0 ) 
+	{
+		if( ( g_allowAdvOnClick  && parent.IsFullScrMode() ) || g_doAdvOnClick ||
+		    (event && ( (event.which == 32) || (event.which == 13) ) ) )
+			parent.M_GoNextSld();
+			return;
+	}		
+	if( IsNts() || (parent.IsFullScrMode() && parent.HideMenu() ) ) return;
+	if( ( g_allowAdvOnClick && parent.IsFullScrMode() ) || g_doAdvOnClick ||
+	    (event && ( (event.keyCode==32) || (event.keyCode == 13) ) ) )
+		parent.M_GoNextSld();
+}
+
+
+var g_supportsPPTHTML = SupportsPPTHTML(), g_scaleInFrame = true, gId="", g_bgSound="",
+    g_scaleHyperlinks = false, g_allowAdvOnClick = true, g_showInBrowser = false, g_doAdvOnClick = false;
+
+ var g_showAnimation = 0;
+var g_hasTrans = false, g_autoTrans = false, g_transSecs = 0;
+var g_animManager = null;
+
+var ENDSHOW_MESG="End of slide show, click to exit.", SCREEN_MODE="Frames", gIsEndShow=0, NUM_VIS_SLDS=18, SCRIPT_HREF="script.js", FULLSCR_HREF="fullscreen.htm";
+var gCurSld = gPrevSld = 1, g_offset = 0, gNtsOpen = gHasNts = gOtlTxtExp = gNarrationPaused = false, gOtlOpen = true
+window.gPPTHTML=SupportsPPTHTML()
+var g_hideNav = 0;
+function UpdNtsPane(){ PPTNts.location.replace( MHTMLPrefix+GetHrefObj( gCurSld ).mNtsHref ) }
+function UpdNavPane( sldIndex ){ if(gNavLoaded) PPTNav.UpdNav() }
+function UpdOtNavPane(){ if(gOtlNavLoaded) PPTOtlNav.UpdOtlNav() }
+function UpdOtlPane(){ if(gOtlLoaded) PPTOtl.UpdOtl() }
+function SetHasNts( fVal )
+{
+	if( gHasNts != fVal ) {
+		gHasNts=fVal
+		UpdNavPane()
+	}
+}
+
+function ToggleVNarration()
+{
+	if ( base.msie < 0 ) {
+		PPTSld.ToggleSound( false, PPTSld.document.NSPlay );
+		return;
+	}
+	
+	rObj=PPTSld.document.all("NSPlay")
+	if( rObj ) {
+		if( gNarrationPaused )
+			rObj.Play()
+		else
+			rObj.Pause()
+
+		gNarrationPaused=!gNarrationPaused
+	}
+}
+
+function PrevSldViewed(){ GoToSld( GetHrefObj(gPrevSld).mSldHref ) }
+function HasPrevSld() { return ( gIsEndShow || ( g_currentSlide != 1 && GetHrefObj( g_currentSlide-1 ).mVis == 1 )||( GetCurrentSlideNum() > 1 ) ) }
+function HasNextSld() { return (GetCurrentSlideNum() != GetNumSlides()) }
+function StartEndShow()
+{
+//	g_hideNav = 1;
+//	PPTNav.location.reload();
+	if( PPTSld.event ) PPTSld.event.cancelBubble=true
+
+	doc=PPTSld.document
+	doc.open()
+	doc.writeln('<html><head><script > /*defer>*/ g_ctxmenu = 0; ' +
+	'if( parent.base.msie < 0 )  { document.captureEvents(Event.KEYPRESS); document.captureEvents(Event.MOUSEDOWN); document.onkeypress = _KPH; document.onmousedown = _KPH; } ' +
+	'function DocumentOnClick(event) { return _KPH(event); }  function IsContextMenu() { return (g_ctxmenu ==1); } ' +
+	'function _KPH(event)' +
+	'{  ' +
+	'if ( parent.base.msie < 0  && (parent.IsFullScrMode() ) && event ) { if ( (!parent.IsMac() && event.which == 3) || ( parent.IsMac() && (event.modifiers & Event.CONTROL_MASK) && event.which == 1 ) )  { return parent.KPH(event); } ' + 
+	' else if (event.which == 27 || event.which == 32 || event.which == 13 || parent.HitOK( event ) || (event.which == 78)  || (event.which == 110) || (event.which == 29) || (event.which == 31) || (event.which == 12) ) { if ( IsContextMenu() ) { return parent.KPH(event); }  parent.base.CloseFullScreen(); return; } ' +
+	' else if ( (event.which == 80)  || (event.which == 112) || (event.which == 30) || (event.which == 28) || (event.which == 11) || (event.which == 8) ) { parent.M_GoPrevSld(); } } ' +
+	'if( parent.HideMenu() ) return; if( (parent.IsFullScrMode() ) && event) { if ( (event.keyCode==27 || event.keyCode == 13 || event.keyCode==32 || event.type=="click" ) || (event.keyCode == 78)  || (event.keyCode == 110) ) { parent.base.CloseFullScreen(); }' +
+	' else if ( (event.keyCode == 80)  || (event.keyCode == 112) ) { parent.M_GoPrevSld(); } } } function Unload() { parent.gIsEndShow=0; } function SetupEndShow() {    if ( !parent.IsFullScrMode() ) { return; } else { parent.PPTNav.location.reload(); }  parent.gIsEndShow=1; if ( parent.g_docTable[0].type != "jpeg" ) { if ( parent.base.msie < 0 ) {parent.createCM(); } document.oncontextmenu=parent._CM; } }</script></head><body scroll=\"no\" onclick=\"DocumentOnClick(event)\" onkeypress=\"_KPH(event)\" bgcolor=\"black\" onload=\"SetupEndShow()\" onunload=\"Unload()\"><center><p><font face=Tahoma color=white size=2><br><b>' + ENDSHOW_MESG + '</b></font></p></center></body></html>')
+	doc.close()
+}
+function SetSldVisited(){ gDocTable[gCurSld-1].mVisited=true }
+function IsSldVisited(){ return gDocTable[gCurSld-1].mVisited }
+function hrefList( sldHref, visible, sldIdx )
+{
+	this.mSldHref= this.mNtsHref = sldHref
+	this.mSldIdx = sldIdx
+	this.mOrigVis= this.mVis = visible
+	this.mVisited= false
+}
+var gDocTable = new Array(
+   new hrefList("slide0001.htm", 1, 1),
+   new hrefList("slide0002.htm", 1, 2),
+   new hrefList("slide0003.htm", 1, 3),
+   new hrefList("slide0004.htm", 1, 4),
+   new hrefList("slide0005.htm", 1, 5),
+   new hrefList("slide0006.htm", 1, 6),
+   new hrefList("slide0007.htm", 1, 7),
+   new hrefList("slide0008.htm", 1, 8),
+   new hrefList("slide0009.htm", 1, 9),
+   new hrefList("slide0010.htm", 1, 10),
+   new hrefList("slide0011.htm", 1, 11),
+   new hrefList("slide0012.htm", 1, 12),
+   new hrefList("slide0013.htm", 1, 13),
+   new hrefList("slide0014.htm", 1, 14),
+   new hrefList("slide0015.htm", 1, 15),
+   new hrefList("slide0016.htm", 1, 16),
+   new hrefList("slide0017.htm", 1, 17),
+   new hrefList("slide0018.htm", 1, 18)
+);
+
+function ImgBtn( oId,bId,w,action )
+{
+	var t=this
+	t.Perform    = _IBP
+	t.SetActive  = _IBSetA
+ t.SetInactive= _IBSetI
+	t.SetPressed = _IBSetP
+	t.SetDisabled= _IBSetD
+	t.Enabled    = _IBSetE
+	t.ChangeIcon = null
+	t.UserAction = action
+	t.ChgState   = _IBUI
+	t.mObjId   = oId
+	t.mBorderId= bId
+	t.mWidth   = w
+	t.mIsOn    = t.mCurState = 0
+}
+function _IBSetA()
+{
+	if( this.mIsOn ) {
+		obj=this.ChgState( gHiliteClr,gShadowClr,2 )
+		obj.style.posTop=0
+	}
+}
+function _IBSetI()
+{
+	if( this.mIsOn ) {
+		obj=this.ChgState( gFaceClr,gFaceClr,1 )
+		obj.style.posTop=0 
+	}
+}
+function _IBSetP()
+{
+	if( this.mIsOn ) {
+		obj=this.ChgState( gShadowClr,gHiliteClr,2 )
+		obj.style.posLeft+=1; obj.style.posTop+=1
+	}
+}
+function _IBSetD()
+{  
+	obj=this.ChgState( gFaceClr,gFaceClr,0 )
+	obj.style.posTop=0 
+}
+function _IBSetE( state )
+{
+	var t=this
+	GetObj( t.mBorderId ).style.visibility="visible"
+	if( state != t.mIsOn ) {
+		t.mIsOn=state
+		if( state )
+			t.SetInactive()
+		else
+			t.SetDisabled()
+	}
+}
+function _IBP()
+{
+	var t=this
+	if( t.mIsOn ) {
+		if( t.UserAction != null )
+			t.UserAction()
+		if( t.ChangeIcon ) {
+			obj=GetObj(t.mObjId)
+			if( t.ChangeIcon() )
+				obj.style.posLeft=obj.style.posLeft+(t.mCurState-4)*t.mWidth
+			else
+				obj.style.posLeft=obj.style.posLeft+(t.mCurState-0)*t.mWidth
+		}
+		t.SetActive()
+	}  
+}
+function _IBUI( clr1,clr2,nextState )
+{
+	var t=this
+	SetBorder( GetObj( t.mBorderId ),clr1,clr2 )
+	obj=GetObj( t.mObjId )
+	obj.style.posLeft=obj.style.posLeft+(t.mCurState-nextState)*t.mWidth-obj.style.posTop
+	t.mCurState=nextState
+	return obj
+}
+function TxtBtn( oId,oeId,action,chkState )
+{
+	var t=this
+	t.Perform    = _TBP
+	t.SetActive  = _TBSetA
+	t.SetInactive= _TBSetI
+	t.SetPressed = _TBSetP
+	t.SetDisabled= _TBSetD
+	t.SetEnabled = _TBSetE
+	t.GetState   = chkState
+	t.UserAction = action
+	t.ChgState   = _TBUI
+	t.mObjId      = oId
+	t.m_elementsId= oeId
+	t.mIsOn       = 1
+}
+function _TBSetA()
+{
+	var t=this
+	if( t.mIsOn && !t.GetState() )
+		t.ChgState( gHiliteClr,gShadowClr,0,0 )
+}
+function _TBSetI()
+{
+	var t=this
+	if( t.mIsOn && !t.GetState() )
+		t.ChgState( gFaceClr,gFaceClr,0,0 )
+}
+function _TBSetP()
+{
+	if( this.mIsOn )
+		this.ChgState( gShadowClr,gHiliteClr,1,1 )
+}
+function _TBSetD()
+{   
+	this.ChgState( gFaceClr,gFaceClr,0,0 )
+	this.mIsOn = 0
+}
+function _TBSetE()
+{
+	var t=this
+	if( !t.GetState() )
+		t.ChgState( gFaceClr,gFaceClr,0,0 )
+	else
+		t.ChgState( gShadowClr,gHiliteClr,1,1 )
+	t.mIsOn = 1
+}
+function _TBP()
+{
+	var t=this
+	if( t.mIsOn ) { 
+		if( t.UserAction != null )
+			t.UserAction()
+		if( t.GetState() )
+			t.SetPressed()
+		else
+			t.SetActive()
+	}  
+}
+function _TBUI( clr1,clr2,lOffset,tOffset )
+{
+	SetBorder( GetObj( this.mObjId ),clr1,clr2 )
+	Offset( GetObj( this.m_elementsId ),lOffset,tOffset )
+}
+function GetObj( objId ){ return document.all.item( objId ) }
+function Offset( obj, top, left ){ obj.style.top=top; obj.style.left=left }
+function SetBorder( obj, upperLeft, lowerRight )
+{
+	s=obj.style;
+	s.borderStyle      = "solid"
+	s.borderWidth      = 1 
+	s.borderLeftColor  = s.borderTopColor = upperLeft
+	s.borderBottomColor= s.borderRightColor = lowerRight
+}
+function GetBtnObj(){ return gBtnArr[window.event.srcElement.id] }
+function BtnOnOver(){ b=GetBtnObj(); if( b != null ) b.SetActive() }
+function BtnOnDown(){ b=GetBtnObj(); if( b != null ) b.SetPressed() }
+function BtnOnOut(){ b=GetBtnObj(); if( b != null ) b.SetInactive() }
+function BtnOnUp()
+{
+	b=GetBtnObj()
+	if( b != null )
+		b.Perform()
+	else
+		Upd()
+}
+function GetNtsState(){ return parent.gNtsOpen }
+function GetOtlState(){ return parent.gOtlOpen }
+function GetOtlTxtState(){ return parent.gOtlTxtExp }
+function NtsBtnSetFlag( fVal )
+{
+	s=document.all.item( this.m_flagId ).style
+	s.display="none"
+	if( fVal )
+		s.display=""
+	else
+		s.display="none"
+}
+
+var gHiliteClr="THREEDHIGHLIGHT",gShadowClr="THREEDSHADOW",gFaceClr="THREEDFACE"
+var gBtnArr = new Array()
+gBtnArr["nb_otl"] = new TxtBtn( "nb_otl","nb_otlElem",parent.ToggleOtlPane,GetOtlState )
+gBtnArr["nb_nts"] = new TxtBtn( "nb_nts","nb_ntsElem",parent.ToggleNtsPane,GetNtsState )
+gBtnArr["nb_prev"]= new ImgBtn( "nb_prev","nb_prevBorder",30,parent.GoToPrevSld )
+gBtnArr["nb_next"]= new ImgBtn( "nb_next","nb_nextBorder",30,parent.GoToNextSld )
+gBtnArr["nb_sldshw"]= new ImgBtn( "nb_sldshw","nb_sldshwBorder",18,parent.FullScreen )
+gBtnArr["nb_voice"]  = new ImgBtn( "nb_voice","nb_voiceBorder",18,parent.ToggleVNarration )
+gBtnArr["nb_otlTxt"]= new ImgBtn( "nb_otlTxt","nb_otlTxtBorder",23,parent.ToggleOtlText )
+gBtnArr["nb_nts"].m_flagId= "notes_flag"
+gBtnArr["nb_nts"].SetFlag = NtsBtnSetFlag
+gBtnArr["nb_otlTxt"].ChangeIcon= GetOtlTxtState
+var sNext="Next",sPrev="Previous",sEnd="End Show",sFont="Arial", alwaysOn = false
+function ShowMenu()
+{
+	BuildMenu();
+	var doc=PPTSld.document.body,x=PPTSld.event.clientX+doc.scrollLeft,y=PPTSld.event.clientY+doc.scrollTop
+
+	m = PPTSld.document.all.item("ctxtmenu")
+	m.style.pixelLeft=x
+	if( (x+m.scrollWidth > doc.clientWidth)&&(x-m.scrollWidth > 0) )
+		m.style.pixelLeft=x-m.scrollWidth
+
+	m.style.pixelTop=y
+	if( (y+m.scrollHeight > doc.clientHeight)&&(y-m.scrollHeight > 0) )
+		m.style.pixelTop=y-m.scrollHeight
+
+	m.style.display=""
+}
+function _CM()
+{
+	if( !parent.IsFullScrMode() && !alwaysOn) return;
+	
+	if(!PPTSld.event.ctrlKey) {
+		ShowMenu()
+		return false
+	} else
+		HideMenu()
+}
+
+function processNavKPH(event) {
+   if ( PPTSld &&  (event.keyCode != 13 || !event.srcElement.href || event.srcElement.href == "" ) )
+	return PPTSld._KPH(event);
+}
+function processNavClick() {
+	HideMenu();
+	return true;
+}
+function BuildMenu()
+{
+	if( PPTSld.document.all.item("ctxtmenu") ) return
+
+	var mObj=CreateItem( PPTSld.document.body )
+mObj.id="ctxtmenu"
+	var s=mObj.style
+	s.position="absolute"
+ s.cursor="default"
+	s.width="100px"
+	SetCMBorder(mObj,"menu","black")
+
+	var iObj=CreateItem( mObj )
+	SetCMBorder( iObj, "threedhighlight","threedshadow" )
+	iObj.style.padding=2
+	if ( self.IsFullScrMode() ) {
+		CreateMenuItem( iObj,sNext,M_GoNextSld,M_True )
+		CreateMenuItem( iObj,sPrev,M_GoPrevSld,M_HasPrevSld )
+	}
+	else {
+		CreateMenuItem( iObj,sNext, base.TP_GoToNextSld, base.HasNextSld )
+		CreateMenuItem( iObj,sPrev,base.GoToPrevSld, base.HasPrevSld )
+	}
+	var sObj=CreateItem( iObj )
+	SetCMBorder(sObj,"menu","menu")
+	var s=sObj.style
+	s.borderTopColor="threedshadow"
+	s.borderBottomColor="threedhighlight"
+	s.height=1
+	s.fontSize="0px"
+	if ( self.IsFullScrMode() ) 
+		CreateMenuItem( iObj,sEnd,M_End,M_True )
+	else
+		CreateMenuItem( iObj,sEnd,M_End,M_False )
+}
+function Highlight() { ChangeClr("activecaption","threedhighlight") }
+function Deselect() { ChangeClr("threedface","menutext") }
+function Perform()
+{
+	e=PPTSld.event.srcElement
+	if( e.type=="menuitem" && e.IsActive() )
+		e.Action()
+	else
+		PPTSld.event.cancelBubble=true
+}
+function ChangeClr( bg,clr )
+{
+	e=PPTSld.event.srcElement
+	if( e.type=="menuitem" && e.IsActive() ) {
+		e.style.backgroundColor=bg
+		e.style.color=clr
+	}
+}
+
+function M_HasPrevSld() { return( base.HasPrevSld() ) }
+function M_GoNextSld() { 
+	base.SetFSMode(1);
+	if( gIsEndShow )
+		 M_End();
+	else {
+		if ( base.HasNextSld() )
+		 base.GoToNextSld();
+		else if (  base.EndSlideShow ) {
+		 StartEndShow();
+		 gIsEndShow = 1;
+		 
+		 PPTNav.location.reload();
+		}
+		else
+			base.CloseFullScreen();
+	}
+}
+function M_GoPrevSld() {
+	base.SetFSMode(1);
+	g_hideNav = 0;
+	if( gIsEndShow ) { 
+		gIsEndShow = 0;
+		if ( base.msie > 0 && IsMac() ) 
+			ChangeFrame( SLIDE_FRAME, GetHrefObj( g_currentSlide ).m_slideHref );
+		else	
+		PPTSld.history.back();
+		
+		 PPTNav.location.reload();
+		if( PPTSld.event )
+			 PPTSld.event.cancelBubble=true;
+	}
+	else
+	 	base.GoToPrevSld();
+}
+function M_True() { return true }
+function M_False() { return false }
+
+function M_End() {
+	base.CloseFullScreen();
+	/*PPTSld.event.cancelBubble=true;
+	window.close( self )*/
+}
+
+function CreateMenuItem( node,text,action,eval )
+{
+	var e=CreateItem( node )
+	e.type="menuitem"
+	e.Action=action
+	e.IsActive=eval
+	e.innerHTML=text
+
+	if( !e.IsActive() )
+		e.style.color="threedshadow"
+	e.onclick=Perform
+	e.onmouseover=Highlight
+	e.onmouseout=Deselect
+	s=e.style;
+	s.fontFamily=sFont
+	s.fontSize="8pt"
+	s.paddingLeft=2
+}
+function CreateItem( node )
+{
+	var elem=PPTSld.document.createElement("DIV")
+	node.insertBefore( elem )
+	return elem
+}
+function SetCMBorder( o,ltClr,rbClr )
+{
+	var s=o.style
+	s.backgroundColor="menu"
+	s.borderStyle="solid"
+	s.borderWidth=1
+	s.borderColor=ltClr+" "+rbClr+" "+rbClr+" "+ltClr
+}
+
+/* netscape context menu */
+g_ctxmenu = 0;
+function setRect( obj, X, Y, W, H ) {
+	obj.top = Y;
+	obj.left = X;
+	obj.clip.top = 0;
+	obj.clip.left = 0;
+	obj.clip.bottom = H;
+	obj.clip.right = W;
+}	
+
+function KPH(event) {
+	if ( ! base.IsFullScrMode() && !alwaysOn )
+		return true;
+		
+	if ( (!IsMac() &&event.which == 3) || ( IsMac() && (event.modifiers & Event.CONTROL_MASK) && event.which == 1 )   ) {
+		PPTSld.g_ctxmenu = 1;
+		PPTSld.stripUobj.visibility = "show";
+		PPTSld.stripDobj.visibility = "show";
+		PPTSld.shadeUobj.visibility = "show";
+		PPTSld.shadeDobj.visibility = "show";
+		PPTSld.panelobj.visibility = "show";
+		PPTSld.Fobj.visibility = "show";
+		PPTSld.Bobj.visibility = "show";
+		PPTSld.Eobj.visibility = "show";
+
+		setRect(PPTSld.shadeUobj, event.pageX-2, event.pageY-2, 82, 67 );		
+		setRect(PPTSld.shadeDobj, event.pageX, event.pageY, 82, 67 );		
+		setRect(PPTSld.panelobj, event.pageX, event.pageY, 80, 65 );		
+		setRect(PPTSld.Fobj, event.pageX, event.pageY, 80, 20 );
+		setRect(PPTSld.Bobj, event.pageX, event.pageY+20, 80, 20 );
+		setRect(PPTSld.stripUobj, event.pageX, event.pageY+41, 80, 1 );		
+		setRect(PPTSld.stripDobj, event.pageX, event.pageY+43, 80, 1 );		
+		setRect(PPTSld.Eobj, event.pageX, event.pageY+45, 80, 20 );
+		return false;
+	}
+	if ( HitOK( event ) ) {
+	PPTSld.g_ctxmenu = 0;
+		PPTSld.stripUobj.visibility = "hide";
+		PPTSld.stripDobj.visibility = "hide";
+		PPTSld.shadeUobj.visibility = "hide";
+		PPTSld.shadeDobj.visibility = "hide";
+		PPTSld.panelobj.visibility = "hide";
+		PPTSld.Fobj.visibility = "hide";
+		PPTSld.Bobj.visibility = "hide";
+		PPTSld.Eobj.visibility = "hide";
+	}
+	return true;
+}
+
+function overMe() {
+	this.bgColor = "blue";
+}
+
+function outMe() {
+	this.bgColor = "#AAAAAA"; 
+}
+
+function makeElement( whichEl, whichContainer ) {
+	if ( arguments.length == 1 ) {
+		whichContainer = PPTSld;
+	}
+	tmp = new Layer(100,whichContainer);
+	eval( whichEl + " = tmp" );
+	return eval(whichEl);
+}
+
+function initMe( obj, clr, text ) {
+	obj.bgColor = clr;
+//	obj.document.write("<a href='javascript:return false'>" + text + "</a>");
+	obj.document.write( "<font size=2 face=Arial " );
+	if ( !M_HasPrevSld() && (obj == PPTSld.Bobj )  ) {
+		obj.document.write( " color='#808080' " );
+	}
+	else {
+		obj.onmouseover = overMe;
+		obj.onmouseout = outMe;
+	}	
+	obj.document.write( " > &nbsp " + text +"</font> <layer top=0 left=0 width=100 height=40 ></layer>");
+	obj.document.close();
+	obj.captureEvents(Event.CLICK);
+	obj.color = "black";		
+}
+
+function createCM() {
+  if ( base.IsFullScrMode() ) {
+  	var clr = "#AAAAAA";
+	PPTSld.shadeUobj = makeElement("SHADEU");
+	PPTSld.shadeDobj = makeElement("SHADED");
+	PPTSld.panelobj = makeElement("PANEL");
+	PPTSld.stripUobj = makeElement("STRIPU");
+	PPTSld.stripDobj = makeElement("STRIPD");
+	PPTSld.shadeUobj.bgColor = "#BBBBBB";
+	PPTSld.shadeDobj.bgColor = "#888888";
+	PPTSld.stripUobj.bgColor = "#777777";
+	PPTSld.stripDobj.bgColor = "#CCCCCC";
+	PPTSld.panelobj.bgColor = clr;
+	PPTSld.Fobj = makeElement("Next");
+	PPTSld.Bobj = makeElement("Previous");
+	PPTSld.Eobj = makeElement("EndShow");
+	initMe( PPTSld.Fobj, clr, "Next" );
+	PPTSld.Fobj.onclick = M_GoNextSld;
+
+	initMe( PPTSld.Bobj, clr, "Previous" );
+	PPTSld.Bobj.onclick = M_GoPrevSld;
+
+	initMe( PPTSld.Eobj, clr, "End Show");
+	PPTSld.Eobj.onclick = base.CloseFullScreen;
+  }
+}
+
+function IsContextMenu() {
+	return (g_ctxmenu == 1)
+}
+var g_notesTable = new Array()
+var g_hiddenSlide = new Array()
+makeSlide( 0,1,1);
+makeSlide( 1,1,1);
+makeSlide( 2,1,1);
+makeSlide( 3,1,1);
+makeSlide( 4,1,1);
+makeSlide( 5,1,1);
+makeSlide( 6,1,1);
+makeSlide( 7,1,1);
+makeSlide( 8,1,1);
+makeSlide( 9,1,1);
+makeSlide( 10,1,1);
+makeSlide( 11,1,1);
+makeSlide( 12,1,1);
+makeSlide( 13,1,1);
+makeSlide( 14,1,1);
+makeSlide( 15,1,1);
+makeSlide( 16,0,1);
+makeSlide( 17,1,1);
+
+var END_SHOW_HREF         = "endshow.htm",
+    OUTLINE_EXPAND_HREF   = "outline_expanded.htm",
+    OUTLINE_COLLAPSE_HREF = "outline_collapsed.htm",
+    OUTLINE_NAVBAR_HREF  = "outline_navigation_bar.htm",
+    NAVBAR_HREF           = "navigation_bar.htm",
+    BLANK_NOTES_HREF	  = "blank_notes.htm",
+    NUM_VISIBLE_SLIDES    = 18,
+    SIMPLE_FRAMESET       = 0,
+    SLIDE_FRAME	        = "PPTSld",
+    NOTES_FRAME           = "PPTNts",
+    OUTLINE_FRAME         = "PPTOtl",
+    OUTLINE_NAVBAR_FRAME  = "PPTOtlNav",
+    NAVBAR_FRAME          = "PPTNav",
+	MAIN_FRAME			  = "MainFrame",
+	FS_NAVBAR_HREF		  = "fs_navigation_bar.htm",
+	isIEFiles 			= 2,
+	isNAVFiles 			= 8,
+	isFLATFiles 			= 16,
+	includeNotes			= 1,
+	PPTPRESENTATION     = 1;
+var  INITSLIDENUM   = 1;
+
+var EndSlideShow = 0;
+var g_outline_href = OUTLINE_COLLAPSE_HREF;	
+var g_fullscrMode = 0;	
+var FSWin = null;
+var gtmpstr = document.location.href;
+var g_baseURL = gtmpstr.substr(0, gtmpstr.lastIndexOf("/") ) + "/" + "webqtl_demo2_part1.ppt_files";
+var g_showoutline = 1;
+var g_shownotes = includeNotes;
+var g_currentSlide = INITSLIDENUM, g_prevSlide = INITSLIDENUM;
+var saveFSSlideNum = saveTPSlideNum = g_currentSlide;
+var saveFSprevSlide = saveTPprevSlide = g_prevSlide;
+var g_slideType="ie";
+var appVer = navigator.appVersion;
+var msie = appVer.indexOf( "MSIE " ) + appVer.indexOf( "Internet Explorer " );
+var isnav = ( navigator.appName.indexOf( "Netscape" ) >= 0 );
+var msieWin31 = (appVer.indexOf( "Windows 3.1" ) > 0);
+var ver = 0;
+var g_done = 0;
+var g_prevotlobjidx = 0;
+var g_ShowFSDefault = 0;
+var g_lastVisibleSld = 1;
+var g_allHidden = false;
+function IsIE() {
+	return (msie >= 0 );
+}
+
+function IsNav() {
+	return (isnav);
+}
+var msiePos = appVer.indexOf( "MSIE " );
+var inexPos = appVer.indexOf( "Internet Explorer " );
+if ( msiePos >= 0 )
+  ver = parseFloat( appVer.substring( msiePos+5, appVer.indexOf ( ";", msiePos ) ) );
+else if( inexPos >= 0 )
+  ver=parseFloat( appVer.substring( inexPos+18, appVer.indexOf(";",inexPos) ) )
+else
+  ver = parseInt( appVer );
+
+//var g_supportsPPTHTML = 0; //!msieWin31 && ( ( msie >= 0 && ver >= 3.02 ) || ( msie < 0 && ver >= 3 ) );
+
+function GetCurrentSlideNum()
+{   
+  obj = GetHrefObj( g_currentSlide );
+  if ( GetHrefObj( g_currentSlide ).m_origVisibility == 1 )
+    return obj.m_slideIdx;
+  else   
+    return g_currentSlide;
+}
+
+function GetNumSlides()
+{
+  if ( GetHrefObj( g_currentSlide ).m_origVisibility == 1 )
+    return NUM_VISIBLE_SLIDES;
+  else
+    return g_docTable.length;
+}
+
+function GetHrefObj( slideIdx )
+{ return g_docTable[slideIdx - 1];
+}
+
+function GetSlideNum( slideHref )
+{
+  for (ii=0; ii<g_docTable.length; ii++) {
+    if ( g_docTable[ii].m_slideHref == slideHref )
+      return ii+1;
+  }
+  return 1;
+}
+
+function GoToNextSld()
+{   
+  targetIdx = g_currentSlide + 1;
+  if ( GetHrefObj( targetIdx-1 ).m_origVisibility == 0 ) {
+    if ( targetIdx<=g_docTable.length ) {
+      obj = GetHrefObj( targetIdx );
+      obj.m_visibility = 1;
+      GoToSld( obj.m_slideHref );
+    }
+  }
+  else {
+    obj = GetHrefObj( targetIdx );
+    while ( obj && ( obj.m_origVisibility == 0 ) && ( targetIdx<=g_docTable.length ) )
+      obj = GetHrefObj( targetIdx++ );
+    if( obj && obj.m_origVisibility )
+      GoToSld( obj.m_slideHref );
+  }
+}
+
+function GoToPrevSld()
+{
+  targetIdx = g_currentSlide - 1;
+  if ( targetIdx > 0 ) {
+    obj = GetHrefObj( targetIdx );
+    while ( ( obj.m_visibility == 0 ) && ( targetIdx>0 ) )
+      obj = GetHrefObj( targetIdx-- );
+    GoToSld( obj.m_slideHref );
+  }
+}
+
+function GoToLast()
+{
+  targetIdx = g_docTable.length;
+  if ( targetIdx != g_currentSlide )
+    GoToSld( GetHrefObj( targetIdx ).m_slideHref );
+}
+
+function GoToFirst()
+{ GoToSld( GetHrefObj(1).m_slideHref );
+}
+
+function highlite() {
+	if ( IsFullScrMode() )
+		return;
+	index = GetCurrentSlideNum();
+	if ( !frames[MAIN_FRAME].frames[OUTLINE_FRAME] )
+		return;
+	if ( msie < 0 ) {
+		if ( g_prevotlobjidx != 0 ) {
+			eval( "otlobj = frames[MAIN_FRAME].frames[OUTLINE_FRAME].document.LAYERID" + g_prevotlobjidx );
+			otlobj.hidden = true;
+		}
+		else
+			index = GetCurrentSlideNum();
+		eval( "otlobj = frames[MAIN_FRAME].frames[OUTLINE_FRAME].document.LAYERID" + index );
+		otlobj.hidden = false;
+	
+		g_prevotlobjidx = index;
+		
+		return;
+	}
+	if ( !g_showoutline )
+		return;
+		
+		backclr = frames[MAIN_FRAME].frames[OUTLINE_FRAME].document.body.bgColor;
+		textclr = frames[MAIN_FRAME].frames[OUTLINE_FRAME].document.body.text;
+	if ( g_prevotlobjidx != 0 ) {
+		eval( "otlobj = frames[MAIN_FRAME].frames[OUTLINE_FRAME].document.all.p" + g_prevotlobjidx );
+		otlobj.style.backgroundColor = backclr;
+		otlobj.style.color = textclr;
+		otlobj.all.AREF.style.color = textclr;
+	}
+	else
+		index = GetCurrentSlideNum();
+	eval( "otlobj = frames[MAIN_FRAME].frames[OUTLINE_FRAME].document.all.p" + index );
+	otlobj.style.backgroundColor = textclr;
+	otlobj.style.color = backclr;
+	otlobj.all.AREF.style.color = backclr;
+	g_prevotlobjidx = index;
+}
+
+function ChangeFrame( frame, href )
+{
+if ( IsFramesMode() ) {
+  if ( NAVBAR_FRAME == frame || OUTLINE_NAVBAR_FRAME ==  frame ) {
+	    frames[frame].location.replace(href);
+  }
+  else if( ! ( ( OUTLINE_FRAME == frame && !g_showoutline)  || (NOTES_FRAME == frame && !g_shownotes ) ) ){
+	    frames[MAIN_FRAME].frames[frame].location.href = href;
+  }
+ }
+ else {
+ 	if ( frame == NAVBAR_FRAME || frame == SLIDE_FRAME ) {
+ 	  if( frame == NAVBAR_FRAME ) {
+ 	  	 href = FS_NAVBAR_HREF;
+ 	  	
+ 	  }	    
+ 	  if( frame == NAVBAR_FRAME ) 
+	      window.frames[frame].location.replace(href);
+	 else
+	      window.frames[frame].location.href = href;
+ 	}
+ }
+  
+}
+
+function shutEventPropagation() {
+	if ( IsNav() )
+		return;
+		
+	var slideFrame;
+	if ( IsFramesMode() )
+		slideFrame = frames[MAIN_FRAME].frames[SLIDE_FRAME];
+	else
+		slideFrame = window.frames[SLIDE_FRAME];
+	if ( slideFrame.event ) 
+		slideFrame.event.cancelBubble=true;
+}
+				
+function GoToSld( slideHref )
+{
+  shutEventPropagation();
+  if ( slideHref != GetHrefObj( g_currentSlide ).m_slideHref || g_slideType != GetHrefObj( g_currentSlide ).type) {
+    g_prevSlide = g_currentSlide;
+    g_currentSlide = GetSlideNum( slideHref );
+	g_slideType = GetHrefObj( g_currentSlide ).type;
+    obj = GetHrefObj( g_currentSlide );
+    obj.m_visibility = 1;
+    ChangeFrame( SLIDE_FRAME, slideHref );
+    if( !SIMPLE_FRAMESET )
+      ChangeFrame( NOTES_FRAME, obj.m_notesHref );
+    ChangeFrame( NAVBAR_FRAME, NAVBAR_HREF );
+	    
+  }
+}
+
+function PrevSldViewed()
+{ GoToSld( GetHrefObj( g_prevSlide ).m_slideHref );
+}
+
+function NoHref() {}
+
+function ExpandOutline( )
+{ 
+ g_outline_href = OUTLINE_EXPAND_HREF;
+ ChangeFrame( OUTLINE_FRAME, OUTLINE_EXPAND_HREF );
+ frames[OUTLINE_NAVBAR_FRAME].location.replace( OUTLINE_NAVBAR_HREF);
+}
+
+function CollapseOutline()
+{ 
+ g_outline_href = OUTLINE_COLLAPSE_HREF;
+ ChangeFrame( OUTLINE_FRAME, OUTLINE_COLLAPSE_HREF );
+ frames[OUTLINE_NAVBAR_FRAME].location.replace( OUTLINE_NAVBAR_HREF);
+ }
+
+function SlideUpdated( id )
+{
+  if ( id != GetHrefObj( g_currentSlide ).m_slideHref )  {
+    g_prevSlide = g_currentSlide;
+    g_currentSlide = GetSlideNum( id );
+    obj = GetHrefObj( g_currentSlide );
+    if( !SIMPLE_FRAMESET )
+      ChangeFrame( NOTES_FRAME, obj.m_notesHref );
+    ChangeFrame( NAVBAR_FRAME, NAVBAR_HREF );
+  }
+}
+
+function hrefList( slideHref, notesHref, visible, slideIdx, type )
+{
+  this.m_slideHref  = slideHref;
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+
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+	SetFSMode(1);
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+		FSWin = window.open( g_baseURL + "/" + "fullscreen.htm", null, "fullscreen=yes");
+	else {
+		var height = screen.availHeight;
+		if ( window.navigator.platform.indexOf( "Mac" ) >= 0 ) {
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+		FSWin = window.open( g_baseURL + "/" + "fullscreen.htm", "null", "height="+ height + ",width=" + screen.availWidth + ",screenX=0,screenY=0");
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+}
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+
+}
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+	GoToSld(GetHrefObj(i).m_slideHref);
+}
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+	GoToNextSld();
+}
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+function TP_GoToPrevSld() {
+	SetFSMode(0);
+	GoToPrevSld();
+}
+
+function CloseFullScreen() {
+	g_done = 0;	
+	
+	if ( IsNav() ){
+		if ( self.opener )
+			opener.FSWin = null;
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+	window.close();
+}
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+}
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+		g_docTable[i] = new hrefList( str, slidenum(i+1 ) + "_notes_pane.htm", g_hiddenSlide[i], i+1-count_hidden, "nav" );
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+    else UpdateLastVisibleSlide( i+1 );
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+}
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+  if ( (msie || isnav ) && ( (os < 0 && ver >= 4 ) || ( os >= 0 && ver >= 5 ) || (os >=0 && msie < 0 && ver >= 4 ) )  ){
+	if ( msie >= 0 )  {
+		if ( isIEFiles > 0 )
+			ieArray( 18 );
+		else if ( isFLATFiles > 0 ){
+			/*if ( IsFramesMode() )
+				StatusPlay("This presentation is optimized for use with older versions of your browser. Since you are using a more recent version of Microsoft Internet Explorer or Netscape Navigator, consider optimizing this presentation to take advantage of your current version's advanced capabilities."); */
+			jpegArray( 18 );
+		}
+		else
+			window.location.replace(  "webqtl_demo2_part1.ppt_files/error.htm" );
+	}
+	else {
+		if ( isNAVFiles > 0 && ver < 5) 
+			navArray( 18 );
+		else if ( isFLATFiles > 0 ) {
+			/* if ( IsFramesMode() )
+				StatusPlay("This presentation is optimized for use with older versions of your browser. Since you are using a more recent version of Microsoft Internet Explorer or Netscape Navigator, consider optimizing this presentation to take advantage of your current version's advanced capabilities."); */
+			jpegArray( 18 );
+		}
+		else
+			window.location.replace(  "webqtl_demo2_part1.ppt_files/error.htm" );
+	}
+}
+else {
+	/*
+	if ( IsFramesMode() && !isWebTV() )
+		StatusPlay("This presentation contains content that your browser may not be able to show properly. This presentation was optimized for more recent versions of Microsoft Internet Explorer or Netscape Navigator.");
+	*/
+	if ( isFLATFiles <= 0 ) {
+	/*	if ( IsFramesMode() )
+			window.alert("This presentation contains content that your browser may not be able to display properly. This presentation is optimized for more recent versions of Microsoft Internet Explorer or Netscape Navigator." );
+	*/
+		window.location.replace(  "webqtl_demo2_part1.ppt_files/error.htm" );
+	}		
+	/*
+	else if ( IsFramesMode()  && !isWebTV() )
+		StatusPlay( "This presentation contains content that your browser may not be able to show properly. This presentation was optimized for more recent versions of Microsoft Internet Explorer or Netscape Navigator." ); 
+	*/	
+	jpegArray ( 18 );
+  }
+  
+}
+
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+	if ( window.navigator.appName.indexOf( 'WebTV' ) >= 0 )
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+}
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+	len = text.length;
+	if ( len < 50 && count < 2) {
+		window.status = text;
+		window.setTimeout( "repeat()", 300 );
+	}	
+	else {
+		var period = 200;
+		window.status = text;
+		newtext = text.substring( 1, len );
+		if ( statusfirst ) {
+			statusfirst = 0;
+			period = 2000;
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+		window.setTimeout( "display50( newtext )", period );
+	}
+}
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+	count++;		
+	statusfirst = 1;
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+}
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+	count = 0;
+	statusText = text;
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+	g_notesTable[i] = notes;
+	g_hiddenSlide[i] = visible;
+}	
+
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0001.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0001.htm
new file mode 100755
index 00000000..d17c2490
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0001.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content="Aug-15-05: GeneNetwork and WebQTL:">
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0001.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.png" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:.88%;left:3.31%;width:84.37%;height:9.89%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='mso-line-spacing:"-277 0 -1";mso-margin-left-alt:232;
+mso-text-indent-alt:0;position:absolute;top:0%;left:1.25%;width:97.95%;
+height:100.0%'><span style='font-size:105%'><i>GeneNetwork and WebQTL:</i></span><span
+style='font-size:68%;mso-special-format:lastCR;display:none'><i><br>
+</i></span></div>
+</div>
+<div style='position:absolute;top:24.02%;left:5.82%;width:69.0%;height:50.7%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=B style='position:absolute;top:0%;left:2.87%;width:97.12%;
+height:71.08%'>
+<div style='mso-line-spacing:"-256 0 -216";mso-margin-left-alt:348;mso-text-indent-alt:
+56;position:absolute;top:0%;left:0%;width:92.68%;height:53.43%'><span
+style='position:absolute;top:0%;left:0%;width:100.0%'><span style='mso-special-format:
+nobullet;display:none;color:#FBFDB8;font-family:"Monotype Sorts";font-size:
+99%'>l</span><span style='font-size:106%;color:#E9EB5D;mso-color-index:3'>Part
+1: How to study </span></span><span style='position:absolute;top:31.19%;
+left:8.1%;width:91.89%'><span style='font-size:106%;color:#E9EB5D;mso-color-index:
+3'>expression variation and </span></span><span style='position:absolute;
+top:61.46%;left:8.1%;width:91.89%'><span style='font-size:106%;color:#E9EB5D;
+mso-color-index:3'>covariation (slides 2&#8211;16)<br>
+</span></span></div>
+<div style='mso-line-spacing:"-256 0 -216";mso-margin-left-alt:348;mso-text-indent-alt:
+56;position:absolute;top:63.23%;left:0%;width:100.0%;height:36.76%'><span
+style='position:absolute;top:0%;left:0%;width:100.0%'><span style='mso-special-format:
+nobullet;display:none;color:#FBFDB8;font-family:"Monotype Sorts";font-size:
+99%'>l</span><span style='font-size:106%;color:#E9EB5D;mso-color-index:3'>Part
+2. Discovering upstream </span></span><span style='position:absolute;
+top:45.33%;left:7.5%;width:89.32%'><span style='font-size:106%;color:#E9EB5D;
+mso-color-index:3'>modulators (slides 17&#8211;30)</span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3;mso-special-format:lastCR;
+display:none'><br>
+</span></span></div>
+</div>
+</div>
+<img border=0 src="slide0001_image001.png" style='position:absolute;top:21.9%;
+left:74.56%;width:23.57%;height:64.31%'>
+<div class=O style='position:absolute;top:79.32%;left:75.89%;width:10.46%;
+height:14.48%'>
+<div style='mso-line-spacing:"-346 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:0%;left:0%;width:100.0%;height:42.68%'><span
+style='font-family:"Arial Rounded MT Bold";font-size:233%;color:#6E6E6E'>RNA</span><span
+style='font-family:"Arial Rounded MT Bold";font-size:300%;color:#6E6E6E;
+display:none'><br>
+</span></div>
+<div style='mso-line-spacing:"-346 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17;position:absolute;top:46.34%;left:0%;width:82.27%;height:54.87%'><span
+style='font-family:"Arial Rounded MT Bold";font-size:300%;color:#6E6E6E;
+mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+<div class=O style='position:absolute;top:66.43%;left:3.44%;width:80.66%;
+height:11.48%'><span style='position:absolute;top:0%;left:0%;width:100.0%'><span
+style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;mso-color-index:
+3'><i>PowerPoint �Normal view� has notes that may be </i></span></span><span
+style='position:absolute;top:50.76%;left:0%;width:86.53%'><span
+style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;mso-color-index:
+3'><i>useful companions to these slides.</i></span><span style='font-family:
+"Gill Sans";font-size:217%;color:#E9EB5D;mso-color-index:3;mso-special-format:
+lastCR;display:none'><br>
+</span></span></div>
+<div class=O style='position:absolute;top:10.95%;left:6.35%;width:55.23%;
+height:7.42%'><span style='font-family:"Gill Sans";font-size:283%;color:#E9EB5D'><i>a
+PowerPoint Presentation</i></span><span style='font-family:"Gill Sans";
+font-size:317%;color:#E9EB5D;mso-special-format:lastCR;display:none'><i><br>
+</i></span></div>
+<div class=O style='position:absolute;top:92.4%;left:75.23%;width:26.49%;
+height:3.88%'><span style='font-family:Helvetica;font-size:167%;color:#E9EB5D'><i>RWW
+07.23.2005</i></span></div>
+<div class=O style='position:absolute;top:81.97%;left:3.44%;width:77.21%;
+height:11.48%'>
+<div style='position:absolute;top:0%;left:0%;width:88.16%;height:49.23%'><span
+style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;mso-color-index:
+3'><i>You can also download this PowerPoint at<br>
+</i></span></div>
+<div style='position:absolute;top:50.76%;left:0%;width:100.0%;height:49.23%'><span
+style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;mso-color-index:
+3'><i>ftp://atlas.utmem.edu/public/webqtl_demo2.ppt </i></span><span
+style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;mso-color-index:
+3;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Welcome to a short
+  demonstration of the GeneNetwork and its WebQTL module. Please adjust the
+  size of the windows on your monitor so that you can see part of this page, as
+  well as GeneNetwork windows. WebQTL produces a large number of new windows,
+  so you may need to modify your browser preferences to permit pop-ups. In this
+  demonstration, we explore one important transcript expressed in the brain:
+  the amyloid beta precursor protein messenger RNA. A protein product of this
+  mRNA, the APP protein, is associated with Alzheimer�s disease.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>My thanks to Dr. Robert
+  F. Clark and Wenli Cai for testing this PowerPoint demonstration and making
+  many improvements.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>(Initial version of June
+  2003 by Rob Williams. Edits July 13, 2005 by RW and RFC. Edit July 14, 2005
+  by WC. Final edits by RF Clark, July 22, 2005.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0001_image001.png b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0001_image001.png
new file mode 100755
index 00000000..a1cb20e4
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0001_image001.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0001_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0001_notes_pane.htm
new file mode 100755
index 00000000..7c670210
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0001_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Welcome to a short
+  demonstration of the GeneNetwork and its WebQTL module. Please adjust the
+  size of the windows on your monitor so that you can see part of this page, as
+  well as GeneNetwork windows. WebQTL produces a large number of new windows,
+  so you may need to modify your browser preferences to permit pop-ups. In this
+  demonstration, we explore one important transcript expressed in the brain:
+  the amyloid beta precursor protein messenger RNA. A protein product of this
+  mRNA, the APP protein, is associated with Alzheimer�s disease.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>My thanks to Dr. Robert
+  F. Clark and Wenli Cai for testing this PowerPoint demonstration and making
+  many improvements.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>(Initial version of June
+  2003 by Rob Williams. Edits July 13, 2005 by RW and RFC. Edit July 14, 2005
+  by WC. Final edits by RF Clark, July 22, 2005.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0002.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0002.htm
new file mode 100755
index 00000000..8627e129
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0002.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0002.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.png" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'><img
+border=0 src="slide0002_image002.png" style='position:absolute;top:8.3%;
+left:.39%;width:86.35%;height:86.21%'><img border=0 src="slide0002_image003.png"
+style='position:absolute;top:34.27%;left:59.07%;width:12.18%;height:14.48%'>
+<div style='position:absolute;top:46.64%;left:85.43%;width:16.29%;height:12.01%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:2.94%;left:5.69%;width:93.49%;
+height:91.17%'>
+<div style='mso-line-spacing:"-224 0 0";position:absolute;top:0%;left:0%;
+width:91.3%;height:51.61%'><span style='font-family:"Gill Sans";font-size:217%;
+color:#E9EB5D;mso-color-index:3'>Choose<br>
+</span></div>
+<div style='mso-line-spacing:"-224 0 0";position:absolute;top:48.38%;
+left:0%;width:100.0%;height:51.61%'><span style='font-family:"Gill Sans";
+font-size:217%;color:#E9EB5D;mso-color-index:3'>database</span></div>
+</div>
+</div>
+<div style='position:absolute;top:62.19%;left:86.62%;width:21.05%;height:12.72%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:6.94%;left:5.03%;width:89.93%;
+height:86.11%'>
+<div style='position:absolute;top:0%;left:0%;width:100.0%;height:51.61%'><span
+style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;mso-color-index:
+3'>Enter<br>
+</span></div>
+<div style='mso-line-spacing:"-224 0 0";position:absolute;top:48.38%;
+left:0%;width:100.0%;height:51.61%'><span style='font-family:"Gill Sans";
+font-size:217%;color:#E9EB5D;mso-color-index:3'><i>APP</i></span><span
+style='font-family:"Gill Sans";font-size:250%;color:#E9EB5D;mso-color-index:
+3;mso-special-format:lastCR;display:none'><i><br>
+</i></span></div>
+</div>
+</div>
+<div style='position:absolute;top:77.73%;left:85.96%;width:12.58%;height:12.72%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:6.94%;left:8.42%;width:91.57%;
+height:86.11%'>
+<div style='position:absolute;top:0%;left:0%;width:91.95%;height:51.61%'><span
+style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;mso-color-index:
+3'>Select<br>
+</span></div>
+<div style='mso-line-spacing:"-224 0 0";position:absolute;top:48.38%;
+left:0%;width:100.0%;height:51.61%'><span style='font-family:"Gill Sans";
+font-size:217%;color:#E9EB5D;mso-color-index:3'>search</span></div>
+</div>
+</div>
+<div style='position:absolute;top:.88%;left:0%;width:111.92%;height:9.18%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div style='position:absolute;top:0%;left:.94%;width:99.05%;height:80.76%'>
+<div class=B1 style='mso-margin-left-alt:644;mso-text-indent-alt:420'></div>
+<div class=B2 style='mso-margin-left-alt:937;mso-text-indent-alt:716'></div>
+<div class=B3 style='mso-margin-left-alt:1232;mso-text-indent-alt:1009'></div>
+<div class=B4 style='mso-margin-left-alt:1544;mso-text-indent-alt:1304'></div>
+<div class=B style='mso-line-spacing:"-220 0 -216";mso-margin-left-alt:348;
+mso-text-indent-alt:0;position:absolute;top:0%;left:0%;width:100.0%;height:
+100.0%'><span style='mso-special-format:nobullet;display:none;color:#FBFDB8;
+font-family:"Monotype Sorts";font-size:99%'>l</span><span style='font-size:
+106%;color:#E9EB5D;mso-color-index:3'>PART 1: How to study variation and
+covariation</span></div>
+</div>
+</div>
+<div style='position:absolute;top:15.54%;left:85.82%;width:16.15%;height:22.43%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='mso-line-spacing:"-224 0 0";position:absolute;top:1.57%;
+left:6.55%;width:94.26%;height:94.48%'><span style='position:absolute;
+top:0%;left:0%;width:91.3%'><span style='font-family:"Gill Sans";font-size:
+217%;color:#E9EB5D;mso-color-index:3'>Choose<span style="mso-spacerun:
+yes">&nbsp; </span></span></span><span style='position:absolute;top:25.0%;
+left:0%;width:91.3%'><span style='font-family:"Gill Sans";font-size:217%;
+color:#E9EB5D;mso-color-index:3'>species, </span></span><span style='position:
+absolute;top:49.16%;left:0%;width:91.3%'><span style='font-family:"Gill Sans";
+font-size:217%;color:#E9EB5D;mso-color-index:3'>group, </span></span><span
+style='position:absolute;top:73.33%;left:0%;width:100.0%'><span
+style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;mso-color-index:
+3'>and type</span></span></div>
+</div>
+<img border=0 src="slide0002_image004.png" style='position:absolute;top:71.37%;
+left:48.87%;width:12.58%;height:13.78%'></div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Please link to the web
+  site:<span style="mso-spacerun: yes">&nbsp; </span>http://www.genenetwork.org</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>To begin a search you
+  make choices about what species, group, and database to explore.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>For this demonstration
+  enter APP as above and click on the SEARCH button. Make sure that the DEFAULT
+  SETTINGS are species = Mouse, Group = BXD, Type = Whole Brain, and Database =
+  INIA BRAIN mRNA M430 (Apr05) PDNN.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>1. The GeneNetwork and
+  WebQTL are often used to work with public data sets. However, it is possible
+  to enter and analyze your own data for specific genetic reference populations
+  such as the BXD genetic reference population of mice or the HXB strains of rat.
+  Entering your own data is a more advanced topic, but if you click on the HOME
+  pop-down menu (upper left), you will see �Enter Trait Data� that will explain
+  the process.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Arial size=3>2.</font><font
+  face=Helvetica size=3> For help on advanced searching methods read the left
+  side of the page (INTRODUCTION).<span style="mso-spacerun: yes">&nbsp;
+  </span>If you make a search term too complex, you may get no hits (try
+  entering �amyloid beta� for example). If you make it too simple, you may also
+  get too many.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Arial size=3>3.</font><font
+  face=Helvetica size=3> Use the asterisk * as a wildcard. For example, to find
+  all <i>Hoxb</i> transcripts, search for Hoxb*.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Arial size=3>4.</font><font
+  face=Helvetica size=3> In some cases you can also research for transcripts
+  and genes using special search strings such as �</font><font face=Geneva
+  size=3>Mb = (Chr1, 100 102)� to find all genes on Chromosome 1 between 98 and
+  104 megabases (don�t actually use the quotes). Details are described at </font><font
+  face=Verdana size=3>http://www.genenetwork.org/searchHelp.html</font><font
+  face=Geneva size=3>.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>5.<span
+  style="mso-spacerun: yes">&nbsp;&nbsp; </span>These INFO buttons provide
+  links to data about the different data types. Try them.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>6.<span
+  style="mso-spacerun: yes">&nbsp; </span>The SET TO DEFAULT button is used to
+  change the database default setting to match your typical search categories.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0002_image002.png b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0002_image002.png
new file mode 100755
index 00000000..2eb797be
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0002_image002.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0002_image003.png b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0002_image003.png
new file mode 100755
index 00000000..d1370484
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0002_image003.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0002_image004.png b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0002_image004.png
new file mode 100755
index 00000000..a4f088b8
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0002_image004.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0002_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0002_notes_pane.htm
new file mode 100755
index 00000000..5f7740c5
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0002_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Please link to the web
+  site:<span style="mso-spacerun: yes">&nbsp; </span>http://www.genenetwork.org</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>To begin a search you
+  make choices about what species, group, and database to explore.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>For this demonstration
+  enter APP as above and click on the SEARCH button. Make sure that the DEFAULT
+  SETTINGS are species = Mouse, Group = BXD, Type = Whole Brain, and Database =
+  INIA BRAIN mRNA M430 (Apr05) PDNN.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>1. The GeneNetwork and
+  WebQTL are often used to work with public data sets. However, it is possible
+  to enter and analyze your own data for specific genetic reference populations
+  such as the BXD genetic reference population of mice or the HXB strains of rat.
+  Entering your own data is a more advanced topic, but if you click on the HOME
+  pop-down menu (upper left), you will see �Enter Trait Data� that will explain
+  the process.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Arial size=2>2.</font><font
+  face=Helvetica size=2> For help on advanced searching methods read the left
+  side of the page (INTRODUCTION).<span style="mso-spacerun: yes">&nbsp;
+  </span>If you make a search term too complex, you may get no hits (try
+  entering �amyloid beta� for example). If you make it too simple, you may also
+  get too many.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Arial size=2>3.</font><font
+  face=Helvetica size=2> Use the asterisk * as a wildcard. For example, to find
+  all <i>Hoxb</i> transcripts, search for Hoxb*.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Arial size=2>4.</font><font
+  face=Helvetica size=2> In some cases you can also research for transcripts
+  and genes using special search strings such as �</font><font face=Geneva
+  color="#222222" size=2>Mb = (Chr1, 100 102)� to find all genes on Chromosome
+  1 between 98 and 104 megabases (don�t actually use the quotes). Details are
+  described at </font><font face=Verdana color=black size=2>http://www.genenetwork.org/searchHelp.html</font><font
+  face=Geneva color="#222222" size=2>.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>5.<span
+  style="mso-spacerun: yes">&nbsp;&nbsp; </span>These INFO buttons provide
+  links to data about the different data types. Try them.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>6.<span
+  style="mso-spacerun: yes">&nbsp; </span>The SET TO DEFAULT button is used to
+  change the database default setting to match your typical search categories.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0003.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0003.htm
new file mode 100755
index 00000000..5507bd68
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0003.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0003.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.png" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'><img
+border=0 src="slide0003_image005.png" style='position:absolute;top:34.27%;
+left:59.07%;width:12.18%;height:14.48%'>
+<div style='position:absolute;top:.88%;left:.79%;width:105.69%;height:9.18%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div style='position:absolute;top:0%;left:1.0%;width:98.99%;height:80.76%'>
+<div class=B1 style='mso-margin-left-alt:644;mso-text-indent-alt:420'></div>
+<div class=B2 style='mso-margin-left-alt:937;mso-text-indent-alt:716'></div>
+<div class=B3 style='mso-margin-left-alt:1232;mso-text-indent-alt:1009'></div>
+<div class=B4 style='mso-margin-left-alt:1544;mso-text-indent-alt:1304'></div>
+<div class=B style='mso-line-spacing:"-220 0 -216";mso-margin-left-alt:348;
+mso-text-indent-alt:0;position:absolute;top:0%;left:0%;width:100.0%;height:
+100.0%'><span style='mso-special-format:nobullet;display:none;color:#FBFDB8;
+font-family:"Monotype Sorts";font-size:99%'>l</span><span style='font-size:
+106%;color:#E9EB5D;mso-color-index:3'>Please also use the Glossary, FAQ, and
+News</span></div>
+</div>
+</div>
+<img border=0 src="slide0003_image006.png" style='position:absolute;top:10.07%;
+left:1.72%;width:69.66%;height:60.95%'><img border=0
+src="slide0003_image008.png" style='position:absolute;top:9.18%;left:18.8%;
+width:12.58%;height:13.78%'><img border=0 src="slide0003_image009.png"
+style='position:absolute;top:49.11%;left:38.27%;width:60.0%;height:48.58%'></div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>SHORT DETOUR to the HELP
+  menu. If you are new to the GeneNetwork, you may find it helpful to review
+  the The Glossary and FAQ pages shown above. We are in the process of making
+  �live� demos for some of the key modules in the GeneNetwork. Check the NEWS
+  every month or two to find out about new features.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0003_image005.png b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0003_image005.png
new file mode 100755
index 00000000..d1370484
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0003_image005.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0003_image006.png b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0003_image006.png
new file mode 100755
index 00000000..c9843a48
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0003_image006.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0003_image008.png b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0003_image008.png
new file mode 100755
index 00000000..504177df
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0003_image008.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0003_image009.png b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0003_image009.png
new file mode 100755
index 00000000..901c77a0
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0003_image009.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0003_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0003_notes_pane.htm
new file mode 100755
index 00000000..b8742fdc
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0003_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>SHORT DETOUR to the HELP
+  menu. If you are new to the GeneNetwork, you may find it helpful to review
+  the The Glossary and FAQ pages shown above. We are in the process of making
+  �live� demos for some of the key modules in the GeneNetwork. Check the NEWS
+  every month or two to find out about new features.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0004.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0004.htm
new file mode 100755
index 00000000..ab2d96f6
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0004.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content="Aug-15-05: Search results">
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0004.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.png" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'><img
+border=0 src="slide0004_image010.png" style='position:absolute;top:9.18%;
+left:3.31%;width:68.74%;height:90.81%'><img border=0
+src="slide0004_image012.png" style='position:absolute;top:63.78%;left:63.57%;
+width:14.7%;height:6.53%'>
+<div class=O style='position:absolute;top:45.93%;left:80.13%;width:18.94%;
+height:47.17%'>
+<div style='mso-line-spacing:"-224 0 0";position:absolute;top:0%;left:0%;
+width:100.0%;height:44.94%'><span style='position:absolute;top:0%;left:0%;
+width:100.0%'><span style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;
+mso-color-index:3'>Highlight </span></span><span style='position:absolute;
+top:24.16%;left:0%;width:100.0%'><span style='font-family:"Gill Sans";
+font-size:217%;color:#E9EB5D;mso-color-index:3'>this probe </span></span><span
+style='position:absolute;top:49.16%;left:0%;width:100.0%'><span
+style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;mso-color-index:
+3'>set in red </span></span><span style='position:absolute;top:73.33%;
+left:0%;width:100.0%'><span style='font-family:"Gill Sans";font-size:217%;
+color:#E9EB5D;mso-color-index:3'>and</span><span style='font-family:"Gill Sans";
+font-size:217%;color:#E9EB5D;mso-color-index:3;display:none'><i><br>
+</i></span></span></div>
+<div style='mso-line-spacing:"-224 0 0";position:absolute;top:43.82%;
+left:0%;width:100.0%;height:56.17%'><span style='position:absolute;top:0%;
+left:0%;width:100.0%'><span style='font-family:"Gill Sans";font-size:217%;
+color:#E9EB5D;mso-color-index:3'>click. You </span></span><span
+style='position:absolute;top:20.0%;left:0%;width:100.0%'><span
+style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;mso-color-index:
+3'>do NOT </span></span><span style='position:absolute;top:39.33%;left:0%;
+width:100.0%'><span style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;
+mso-color-index:3'>have to </span></span><span style='position:absolute;
+top:59.33%;left:0%;width:100.0%'><span style='font-family:"Gill Sans";
+font-size:217%;color:#E9EB5D;mso-color-index:3'>select the </span></span><span
+style='position:absolute;top:78.66%;left:0%;width:100.0%'><span
+style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;mso-color-index:
+3'>checkbox</span><span style='font-family:"Gill Sans";font-size:250%;
+color:#E9EB5D;mso-color-index:3;mso-special-format:lastCR;display:none'><br>
+</span></span></div>
+</div>
+<div style='position:absolute;top:-4.41%;left:1.72%;width:84.63%;height:18.19%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='position:absolute;top:29.12%;left:1.4%;width:97.18%;
+height:42.71%'><span style='font-size:82%'>Search results</span><span
+style='mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+</div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>RESULTS OF THE APP
+  SEARCH.<span style="mso-spacerun: yes">&nbsp; </span>A search of the INIA
+  Brain database generates 18 matches, 10 of which are shown above. The
+  GeneNetwork will display several hundred matches in pages of 40 each. If a
+  search generates a larger numbers of hits, then you will need to refine
+  search terms.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>1. APP is a great
+  transcript to introduce you to the complexity and power of new array
+  platforms that often provide �alternative� expression estimates for single
+  genes. There are seven probe sets that target different parts of the APP
+  transcript. Which of the alternative measurements is most appropriate and
+  informative? Have a look at the FAQ page for more on this topic, but general
+  advice: 1. be skeptical and try to validate that the correct transcript and
+  gene is being measured; 2. check what part of the transcript is complementary
+  to the probes; 3. evaluate the performance of individual probes based on
+  expression level, signal-to-noise and other error terms such as the standard
+  deviation and error.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>2. In this particular
+  case we have highlighted and selected # 5 on this SEARCH RESULTS page. The
+  annotation for this probe set mentions that it targets the last three exons
+  and the 3� untranslated region (UTR) of the amyloid precursor protein (APP).<span
+  style="mso-spacerun: yes">&nbsp; </span>That is just what we want.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>3. Most probe sets have
+  not been annotated in as much detail as App. Refer tot the FAQ to learn how
+  to annotate probe sets yourself.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0004_image010.png b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0004_image010.png
new file mode 100755
index 00000000..08c136e3
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0004_image010.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0004_image012.png b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0004_image012.png
new file mode 100755
index 00000000..b8e67f4d
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0004_image012.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0004_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0004_notes_pane.htm
new file mode 100755
index 00000000..f7336dcc
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0004_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>RESULTS OF THE APP
+  SEARCH.<span style="mso-spacerun: yes">&nbsp; </span>A search of the INIA
+  Brain database generates 18 matches, 10 of which are shown above. The
+  GeneNetwork will display several hundred matches in pages of 40 each. If a
+  search generates a larger numbers of hits, then you will need to refine
+  search terms.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>1. APP is a great
+  transcript to introduce you to the complexity and power of new array
+  platforms that often provide �alternative� expression estimates for single
+  genes. There are seven probe sets that target different parts of the APP
+  transcript. Which of the alternative measurements is most appropriate and
+  informative? Have a look at the FAQ page for more on this topic, but general
+  advice: 1. be skeptical and try to validate that the correct transcript and
+  gene is being measured; 2. check what part of the transcript is complementary
+  to the probes; 3. evaluate the performance of individual probes based on
+  expression level, signal-to-noise and other error terms such as the standard
+  deviation and error.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>2. In this particular
+  case we have highlighted and selected # 5 on this SEARCH RESULTS page. The
+  annotation for this probe set mentions that it targets the last three exons
+  and the 3� untranslated region (UTR) of the amyloid precursor protein (APP).<span
+  style="mso-spacerun: yes">&nbsp; </span>That is just what we want.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>3. Most probe sets have
+  not been annotated in as much detail as App. Refer tot the FAQ to learn how
+  to annotate probe sets yourself.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0005.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0005.htm
new file mode 100755
index 00000000..53f61532
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0005.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0005.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.png" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'><img
+border=0 src="slide0005_image013.png" style='position:absolute;top:8.83%;
+left:2.51%;width:77.48%;height:80.56%'>
+<div style='position:absolute;top:1.06%;left:0%;width:108.21%;height:8.3%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=B style='mso-line-spacing:"-220 0 -216";mso-margin-left-alt:348;
+mso-text-indent-alt:56;position:absolute;top:0%;left:1.83%;width:98.16%;
+height:78.72%'><span style='mso-special-format:nobullet;display:none;
+color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3'>First page of data: The
+Trait Data and Analysis Form</span><span style='font-size:106%;color:#E9EB5D;
+mso-color-index:3;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+<img border=0 src="slide0005_image014.png" style='position:absolute;top:34.98%;
+left:68.74%;width:16.42%;height:9.71%'>
+<div style='position:absolute;top:23.32%;left:84.76%;width:16.68%;height:34.09%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=O style='position:absolute;top:2.07%;left:6.34%;width:93.65%;
+height:95.33%'><span style='position:absolute;top:0%;left:0%;width:90.67%'><span
+style='font-size:200%;color:#E9EB5D'><i>Click </i></span></span><span
+style='position:absolute;top:16.3%;left:0%;width:90.67%'><span
+style='font-size:200%;color:#E9EB5D'><i>here<br>
+</i></span></span>
+<div style='position:absolute;top:33.15%;left:0%;width:100.0%;height:16.84%'><span
+style='font-size:200%;color:#E9EB5D'><i>to learn<br>
+</i></span></div>
+<div style='position:absolute;top:49.45%;left:0%;width:90.67%;height:16.84%'><span
+style='font-size:200%;color:#E9EB5D'><i>about<br>
+</i></span></div>
+<div style='position:absolute;top:66.3%;left:0%;width:90.67%;height:16.84%'><span
+style='font-size:200%;color:#E9EB5D'><i>data<br>
+</i></span></div>
+<div style='position:absolute;top:83.15%;left:0%;width:90.67%;height:16.84%'><span
+style='font-size:200%;color:#E9EB5D'><i>source</i></span></div>
+</div>
+</div>
+</div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>The Trait Data and
+  Analysis Form is the single most important page from the point of view of
+  working with GeneNetwork data. Please read the text carefully. Explore the
+  links, but do not close this page. We will need it many more times in this
+  demonstration.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>1. What is this
+  database? It is called INIA Brain mRNA M430 (Apr05) PDNN, but what does that
+  actually mean. How much of the brain was used? How were the animals
+  processed? Most of these types of questions can be answered by clicking on
+  the DATABASE link.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>2. Transcript/gene
+  LOCATION data is usually from the most recent assembly. You can VERIFY the
+  location of the probes and probe set using the two VERIFY buttons. VERIFY
+  UCSC performs a sequence alignment (BLAT analysis) of the probes to the most
+  recent assembly.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>3. The PROBE TOOL button
+  provides you with highly detailed information on the probe sequences used to
+  assemble the probe set. For example, in this case you can find out which
+  probes correspond to which of the three exons. You can also review the
+  performance of the individual probes. Please check the GLOSSARY for
+  additional details on probes.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>4. The identifiers (IDs)
+  provide links to other key resources.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0005_image013.png b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0005_image013.png
new file mode 100755
index 00000000..55769e36
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0005_image013.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0005_image014.png b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0005_image014.png
new file mode 100755
index 00000000..e49ba16e
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0005_image014.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0005_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0005_notes_pane.htm
new file mode 100755
index 00000000..fbe8c631
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0005_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>The Trait Data and
+  Analysis Form is the single most important page from the point of view of
+  working with GeneNetwork data. Please read the text carefully. Explore the
+  links, but do not close this page. We will need it many more times in this
+  demonstration.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>1. What is this
+  database? It is called INIA Brain mRNA M430 (Apr05) PDNN, but what does that
+  actually mean. How much of the brain was used? How were the animals
+  processed? Most of these types of questions can be answered by clicking on
+  the DATABASE link.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>2. Transcript/gene
+  LOCATION data is usually from the most recent assembly. You can VERIFY the
+  location of the probes and probe set using the two VERIFY buttons. VERIFY
+  UCSC performs a sequence alignment (BLAT analysis) of the probes to the most
+  recent assembly.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>3. The PROBE TOOL button
+  provides you with highly detailed information on the probe sequences used to
+  assemble the probe set. For example, in this case you can find out which
+  probes correspond to which of the three exons. You can also review the
+  performance of the individual probes. Please check the GLOSSARY for
+  additional details on probes.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>4. The identifiers (IDs)
+  provide links to other key resources.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0006.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0006.htm
new file mode 100755
index 00000000..fa44d20c
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0006.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0006.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.png" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:-1.06%;left:0%;width:100.26%;height:10.07%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=B style='mso-line-spacing:"-220 0 -216";mso-margin-left-alt:348;
+mso-text-indent-alt:56;position:absolute;top:0%;left:1.98%;width:96.82%;
+height:73.68%'><span style='mso-special-format:nobullet;display:none;
+color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>Data sources: Metadata
+for each resource</span></div>
+</div>
+<img border=0 src="slide0006_image015.png" style='position:absolute;top:6.71%;
+left:3.31%;width:60.39%;height:92.22%'></div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Most of the database
+  components and resources in The GeneNetwork are linked to metadata pages that
+  provide a human-readable summary of how, why, where, when, and with whom the
+  data were generated. Before you get too involved with a data set, it is
+  naturally important to read this information. While the data in The
+  GeneNetwork may be accessible and useful, that does not always mean that the
+  data is public domain and available for you to use in publication or for
+  profit purposes. If you want to know more about the data ownership and usage,
+  please read through the POLICIES pop-down menu items.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0006_image015.png b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0006_image015.png
new file mode 100755
index 00000000..ff7d776a
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0006_image015.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0006_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0006_notes_pane.htm
new file mode 100755
index 00000000..f29819ad
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0006_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Most of the database
+  components and resources in The GeneNetwork are linked to metadata pages that
+  provide a human-readable summary of how, why, where, when, and with whom the
+  data were generated. Before you get too involved with a data set, it is
+  naturally important to read this information. While the data in The
+  GeneNetwork may be accessible and useful, that does not always mean that the
+  data is public domain and available for you to use in publication or for
+  profit purposes. If you want to know more about the data ownership and usage,
+  please read through the POLICIES pop-down menu items.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0007.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0007.htm
new file mode 100755
index 00000000..a30b21f1
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0007.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0007.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.png" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:-.35%;left:-.79%;width:109.13%;height:7.42%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=B style='mso-line-spacing:"-220 0 -216";mso-margin-left-alt:348;
+mso-text-indent-alt:56;position:absolute;top:0%;left:1.82%;width:98.17%;
+height:88.09%'><span style='mso-special-format:nobullet;display:none;
+color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3'>Expression estimates for </span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3'><i>App</i></span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3'> on the Trait Data form</span><span
+style='font-size:81%;color:#E9EB5D;mso-color-index:3'> </span></div>
+</div>
+<div style='position:absolute;top:81.09%;left:2.51%;width:110.46%;height:11.48%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=O style='position:absolute;top:7.69%;left:.83%;width:99.16%;
+height:84.61%'><span style='position:absolute;top:0%;left:0%;width:100.0%'><span
+style='font-family:"Gill Sans";font-size:183%;color:#E9EB5D;mso-color-index:
+3'>Trait data for each strain with SE when known. For array data the scale is </span></span><span
+style='position:absolute;top:49.09%;left:0%;width:84.28%'><span
+style='font-family:"Gill Sans";font-size:183%;color:#E9EB5D;mso-color-index:
+3'>~ log base 2.<span style="mso-spacerun: yes">&nbsp;&nbsp; </span></span><span
+style='font-size:167%;color:#E9EB5D;mso-color-index:3'>F1 data = 16.723 =
+2^16.723 = 108,174</span></span></div>
+</div>
+<img border=0 src="slide0007_image016.png" style='position:absolute;top:7.77%;
+left:2.51%;width:51.65%;height:72.26%'><img border=0
+src="slide0007_image017.png" style='position:absolute;top:33.92%;left:57.88%;
+width:30.72%;height:13.42%'>
+<div style='position:absolute;top:47.7%;left:57.48%;width:36.29%;height:18.9%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=1)'>
+<div class=O style='position:absolute;top:3.73%;left:2.91%;width:97.08%;
+height:96.26%'><span style='position:absolute;top:0%;left:0%;width:96.24%'><span
+style='font-size:167%;color:#E9EB5D;mso-color-index:3'>These values can all </span></span><span
+style='position:absolute;top:25.24%;left:0%;width:93.98%'><span
+style='font-size:167%;color:#E9EB5D;mso-color-index:3'>be changed by the </span></span><span
+style='position:absolute;top:49.51%;left:0%;width:100.0%'><span
+style='font-size:167%;color:#E9EB5D;mso-color-index:3'>user. (Yes, there is a </span></span><span
+style='position:absolute;top:74.75%;left:0%;width:93.98%'><span
+style='font-size:167%;color:#E9EB5D;mso-color-index:3'>RESET)</span></span></div>
+</div>
+</div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>This slide shows you the
+  lower parts of the Trait Data and Analysis Form with the data for the first
+  set of BXD strains</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0007_image016.png b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0007_image016.png
new file mode 100755
index 00000000..53a17c76
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0007_image016.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0007_image017.png b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0007_image017.png
new file mode 100755
index 00000000..308c4df0
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0007_image017.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0007_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0007_notes_pane.htm
new file mode 100755
index 00000000..f5bc813e
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0007_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>This slide shows you the
+  lower parts of the Trait Data and Analysis Form with the data for the first
+  set of BXD strains</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0008.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0008.htm
new file mode 100755
index 00000000..c0fa9166
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0008.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0008.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.png" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:.53%;left:.79%;width:98.54%;height:8.12%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=B style='mso-line-spacing:"-220 0 -216";mso-margin-left-alt:348;
+mso-text-indent-alt:56;position:absolute;top:0%;left:2.01%;width:96.9%;
+height:91.3%'><span style='mso-special-format:nobullet;display:none;color:#FBFDB8;
+font-family:"Monotype Sorts";font-size:99%'>l</span><span style='font-size:
+106%;color:#E9EB5D;mso-color-index:3'>Critiquing the </span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'><i>App</i></span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'> data the Trait Data</span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</div>
+<div style='position:absolute;top:74.38%;left:2.51%;width:110.86%;height:13.78%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=O style='position:absolute;top:6.41%;left:.83%;width:99.16%;
+height:88.46%'><span style='position:absolute;top:0%;left:0%;width:98.55%'><span
+style='font-family:"Gill Sans";font-size:150%;color:#E9EB5D;mso-color-index:
+3'>Use the BASIC STATISTICS button to evaluate the App data. You will find that
+App data </span></span><span style='position:absolute;top:31.88%;left:0%;
+width:100.0%'><span style='font-family:"Gill Sans";font-size:150%;color:#E9EB5D;
+mso-color-index:3'>from the different strains are not equally trustworthy. BXD8
+is an obvious outlier without </span></span><span style='position:absolute;
+top:63.76%;left:0%;width:93.85%'><span style='font-family:"Gill Sans";
+font-size:150%;color:#E9EB5D;mso-color-index:3'>replication (no error bar)</span><span
+style='font-size:150%;color:#E9EB5D;mso-color-index:3'>. BXD33 is also
+suspiciously low. BXD5 is noisy. </span><span style='font-family:"Gill Sans";
+font-size:150%;color:#E9EB5D;mso-color-index:3;mso-special-format:lastCR;
+display:none'><br>
+</span></span></div>
+</div>
+<img border=0 src="slide0008_image018.png" style='position:absolute;top:7.77%;
+left:2.11%;width:16.02%;height:18.72%'><img border=0
+src="slide0008_image019.png" style='position:absolute;top:8.3%;left:18.27%;
+width:73.37%;height:66.07%'><img border=0 src="slide0008_image021.png"
+style='position:absolute;top:87.27%;left:59.6%;width:30.72%;height:13.42%'></div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>The Basic Statistics
+  page allows you to evaluate some aspects of the data quality. In this case,
+  BXD8 is a potential problem. An outlier of this type may be generated by a
+  technical artifact (bad sample?). However, it is also possible that BXD8 just
+  has genuine low endogenous expression of App and may therefore be a
+  particularly valuable model for research. There are different ways to treat
+  problematic data of these types. One way is simply to discard this datum. The
+  other way is to prevent outliers from have too much influence quantitatively,
+  while leaving them in their low (or high positions). This is called
+  windsorizing the data (after King Henry the VIII who had a habit of chopping
+  heads). In this case, we have windsorized the BXD8 to a value of 16.0 and the
+  BXD33 to a value of 16.02. Rank is retained. We are making a bet that the two
+  lowest strains are really low, but we are hedging our bet and just making
+  them a little lower than BXD90. This removes their �undue� influence.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>1. It turns out that
+  BXD8 is a strain with many odd phenotypes. The whole strain is essentially an
+  outlier for many traits. Therefore, the low App expression data may be quite
+  accurate. Still, it would be comforting to have at least two more replicates.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0008_image018.png b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0008_image018.png
new file mode 100755
index 00000000..9535e6bb
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diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0008_image019.png b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0008_image019.png
new file mode 100755
index 00000000..7e86d735
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new file mode 100755
index 00000000..2f8dfb0a
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+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0008_image021.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0008_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0008_notes_pane.htm
new file mode 100755
index 00000000..455928c7
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0008_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>The Basic Statistics
+  page allows you to evaluate some aspects of the data quality. In this case,
+  BXD8 is a potential problem. An outlier of this type may be generated by a
+  technical artifact (bad sample?). However, it is also possible that BXD8 just
+  has genuine low endogenous expression of App and may therefore be a
+  particularly valuable model for research. There are different ways to treat
+  problematic data of these types. One way is simply to discard this datum. The
+  other way is to prevent outliers from have too much influence quantitatively,
+  while leaving them in their low (or high positions). This is called
+  windsorizing the data (after King Henry the VIII who had a habit of chopping
+  heads). In this case, we have windsorized the BXD8 to a value of 16.0 and the
+  BXD33 to a value of 16.02. Rank is retained. We are making a bet that the two
+  lowest strains are really low, but we are hedging our bet and just making
+  them a little lower than BXD90. This removes their �undue� influence.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>1. It turns out that
+  BXD8 is a strain with many odd phenotypes. The whole strain is essentially an
+  outlier for many traits. Therefore, the low App expression data may be quite
+  accurate. Still, it would be comforting to have at least two more replicates.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0009.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0009.htm
new file mode 100755
index 00000000..2daff7ac
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0009.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0009.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.png" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:0%;left:1.72%;width:93.64%;height:14.48%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=B style='mso-line-spacing:"-220 0 -216";mso-margin-left-alt:348;
+mso-text-indent-alt:56;position:absolute;top:0%;left:2.12%;width:96.6%;
+height:51.21%'><span style='mso-special-format:nobullet;display:none;
+color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'><i>App</i></span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'> expression after
+windsorizing</span></div>
+</div>
+<img border=0 src="slide0009_image022.png" style='position:absolute;top:8.83%;
+left:2.51%;width:94.17%;height:83.74%'></div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Now we get a much better
+  feel for the variation in the error among the cases. Those without error bars
+  are of course the �noisiest� of all. This data set is not complete yet (the
+  aim is to acquire at least one male-female sample for each BXD strain).</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0009_image022.png b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0009_image022.png
new file mode 100755
index 00000000..e03c35ed
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0009_image022.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0009_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0009_notes_pane.htm
new file mode 100755
index 00000000..b2f9f9f2
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0009_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Now we get a much better
+  feel for the variation in the error among the cases. Those without error bars
+  are of course the �noisiest� of all. This data set is not complete yet (the
+  aim is to acquire at least one male-female sample for each BXD strain).</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0010.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0010.htm
new file mode 100755
index 00000000..4d02c34e
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0010.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0010.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.png" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:0%;left:.79%;width:93.64%;height:14.48%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=B style='mso-line-spacing:"-220 0 -216";mso-margin-left-alt:348;
+mso-text-indent-alt:56;position:absolute;top:0%;left:2.12%;width:97.45%;
+height:51.21%'><span style='mso-special-format:nobullet;display:none;
+color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>Discovering shared
+expression patterns</span></div>
+</div>
+<img border=0 src="slide0010_image023.png" style='position:absolute;top:10.07%;
+left:3.31%;width:94.17%;height:37.27%'><img border=0
+src="slide0010_image024.png" style='position:absolute;top:38.86%;left:61.72%;
+width:13.77%;height:14.84%'></div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Finally, we can now
+  start an analysis.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>We ask a simple
+  question:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Do differences in this
+  particular App transcript steady-state abundance level correlate with those
+  of any other transcripts in the same INIA Brain mRNA M430 data set?</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Arial size=3>1.</font><font
+  face=Helvetica size=3>You can CHOOSE many other DATABASES at this point if
+  you want, but for now let�s stick with the default.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>2. There are different
+  ways to sort the correlations. The most obvious is by p-value (most
+  significant values at the top of the list), but it is also interesting to
+  sort the top 100 or top 500 by their gene symbol (gene ID) or by their
+  chromosomal location (position).</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>3. If you don�t want
+  your analysis to be sensitive to outliers, then you may want to choose to use
+  the Spearman Rank Order method of calculating correlations.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0010_image023.png b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0010_image023.png
new file mode 100755
index 00000000..1d32d035
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new file mode 100755
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diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0010_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0010_notes_pane.htm
new file mode 100755
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--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0010_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Finally, we can now
+  start an analysis.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>We ask a simple
+  question:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Do differences in this
+  particular App transcript steady-state abundance level correlate with those
+  of any other transcripts in the same INIA Brain mRNA M430 data set?</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Arial size=2>1.</font><font
+  face=Helvetica size=2>You can CHOOSE many other DATABASES at this point if
+  you want, but for now let�s stick with the default.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>2. There are different
+  ways to sort the correlations. The most obvious is by p-value (most
+  significant values at the top of the list), but it is also interesting to
+  sort the top 100 or top 500 by their gene symbol (gene ID) or by their
+  chromosomal location (position).</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>3. If you don�t want
+  your analysis to be sensitive to outliers, then you may want to choose to use
+  the Spearman Rank Order method of calculating correlations.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0011.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0011.htm
new file mode 100755
index 00000000..362057fc
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0011.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0011.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.png" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:.35%;left:-.79%;width:93.64%;height:14.48%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=B style='mso-line-spacing:"-220 0 -216";mso-margin-left-alt:348;
+mso-text-indent-alt:56;position:absolute;top:0%;left:2.12%;width:96.6%;
+height:51.21%'><span style='mso-special-format:nobullet;display:none;
+color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>Transcript neighborhoods</span></div>
+</div>
+<img border=0 src="slide0011_image025.png" style='position:absolute;top:7.77%;
+left:2.51%;width:85.82%;height:91.87%'></div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>The Traits Correlation
+  output window (Correlation Results) compares App expression data with all
+  other traits in this INIA Brain data set. The most significant 100 or 500
+  transcripts are sorted by their p-values. The top correlation is that of the
+  probe set to itself (often a value of 1.0, but in this case we modified the
+  App values manually by windsorizing the data). The next best correlation is
+  to another App probe set. The fourth correlation is interesting and suggests
+  that there may be a link between App and a particular type of ataxia (Atcay).</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Arial size=3>1.</font><font
+  face=Helvetica size=3>Use the checkboxes to the far left to select traits
+  that you want to study together. Once you have selected interesting traits,
+  click on the ADD SELECTION button. This puts all of the selected traits into
+  a SELECTIONS WINDOW for other types of analysis.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>2. The p-value is not
+  corrected for multiple tests. A conservative approach for array data would be
+  to assume 10,000 nominally independent tests. Subtract 4 from the exponent
+  and if the value is still smaller than 0.05 you may have a real correlation.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>3. The LITERATURE
+  CORRELATION is a data type generated by Drs. Ramin Homayouni and Michael
+  Berry. Click on the header column by the asterisk for more information on
+  this highly useful data type.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>4. We are using Pearson
+  product moment correlations rather that the Spearman rank order correlation.
+  But you can select either in the previous step.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0011_image025.png b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0011_image025.png
new file mode 100755
index 00000000..d29a333f
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0011_image025.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0011_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0011_notes_pane.htm
new file mode 100755
index 00000000..1f0dd0d1
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0011_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>The Traits Correlation
+  output window (Correlation Results) compares App expression data with all
+  other traits in this INIA Brain data set. The most significant 100 or 500
+  transcripts are sorted by their p-values. The top correlation is that of the
+  probe set to itself (often a value of 1.0, but in this case we modified the
+  App values manually by windsorizing the data). The next best correlation is
+  to another App probe set. The fourth correlation is interesting and suggests
+  that there may be a link between App and a particular type of ataxia (Atcay).</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Arial size=2>1.</font><font
+  face=Helvetica size=2>Use the checkboxes to the far left to select traits
+  that you want to study together. Once you have selected interesting traits,
+  click on the ADD SELECTION button. This puts all of the selected traits into
+  a SELECTIONS WINDOW for other types of analysis.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>2. The p-value is not
+  corrected for multiple tests. A conservative approach for array data would be
+  to assume 10,000 nominally independent tests. Subtract 4 from the exponent
+  and if the value is still smaller than 0.05 you may have a real correlation.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>3. The LITERATURE
+  CORRELATION is a data type generated by Drs. Ramin Homayouni and Michael
+  Berry. Click on the header column by the asterisk for more information on
+  this highly useful data type.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>4. We are using Pearson
+  product moment correlations rather that the Spearman rank order correlation.
+  But you can select either in the previous step.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0012.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0012.htm
new file mode 100755
index 00000000..4f1cf425
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0012.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0012.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.png" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:.35%;left:1.72%;width:93.64%;height:14.48%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=B style='mso-line-spacing:"-220 0 -216";mso-margin-left-alt:348;
+mso-text-indent-alt:56;position:absolute;top:0%;left:2.12%;width:96.6%;
+height:51.21%'><span style='mso-special-format:nobullet;display:none;
+color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'><i>App</i></span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'> and </span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'><i>Atcay</i></span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'> transcript scatterplot </span></div>
+</div>
+<img border=0 src="slide0012_image026.png" style='position:absolute;top:8.48%;
+left:5.03%;width:66.22%;height:91.16%'></div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>By clicking on the
+  CORRELATION of the Atcay transcript to the App transcript, you can generate a
+  Correlation plot between these two transcripts. In this App and Atcay
+  scatterplot, each point is a strain mean value. For example, BXD33 and BXD8
+  have low App and Atcay expressions. The two parental strains and the F1 are
+  also included in this plot.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0012_image026.png b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0012_image026.png
new file mode 100755
index 00000000..a0675ffc
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0012_image026.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0012_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0012_notes_pane.htm
new file mode 100755
index 00000000..c13d07ec
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0012_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>By clicking on the
+  CORRELATION of the Atcay transcript to the App transcript, you can generate a
+  Correlation plot between these two transcripts. In this App and Atcay
+  scatterplot, each point is a strain mean value. For example, BXD33 and BXD8
+  have low App and Atcay expressions. The two parental strains and the F1 are
+  also included in this plot.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0013.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0013.htm
new file mode 100755
index 00000000..5aa623bf
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0013.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0013.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.png" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:.35%;left:.79%;width:99.47%;height:14.48%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=B style='mso-line-spacing:"-220 0 -216";mso-margin-left-alt:348;
+mso-text-indent-alt:56;position:absolute;top:0%;left:1.99%;width:96.8%;
+height:51.21%'><span style='mso-special-format:nobullet;display:none;
+color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'><i>App</i></span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'> transcript and eight of
+its neighbors</span></div>
+</div>
+<img border=0 src="slide0013_image027.png" style='position:absolute;top:9.71%;
+left:2.51%;width:83.84%;height:90.1%'></div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>A group of traits from
+  many different databases can be selected and brought together for joint
+  analysis. In this case all of the content of the BXD SELECTIONS is from a
+  single BRAIN database, the top 20 neighbors of the App transcript from the
+  Correlation Results table. Eight of these neighbors plus App is shown in the
+  slide.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Arial size=3>1.</font><font
+  face=Helvetica size=3>All of items in the BXD SELECTIONS were selected using
+  the SELECT ALL button</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>2. The buttons at the
+  top (and bottom) of this page can do some cool stuff. We will work with
+  NETWORK GRAPH first.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>3. Think of the
+  SELECTIONS as your shopping cart. You go to different aisles in the
+  supermarket to acquire different types of items of interest. These could
+  include transcripts, classical phenotypes (longevity, brain weight, prepulse
+  inhibition, iron levels in midbrain). �Checking out� in this case involves
+  doing some analysis with the items in the cart.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>4. Different tools
+  handle different numbers of items. Most will handle up to 100 traits.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0013_image027.png b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0013_image027.png
new file mode 100755
index 00000000..ba473846
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0013_image027.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0013_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0013_notes_pane.htm
new file mode 100755
index 00000000..4d56b194
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0013_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>A group of traits from
+  many different databases can be selected and brought together for joint
+  analysis. In this case all of the content of the BXD SELECTIONS is from a
+  single BRAIN database, the top 20 neighbors of the App transcript from the
+  Correlation Results table. Eight of these neighbors plus App is shown in the
+  slide.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Arial size=2>1.</font><font
+  face=Helvetica size=2>All of items in the BXD SELECTIONS were selected using
+  the SELECT ALL button</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>2. The buttons at the
+  top (and bottom) of this page can do some cool stuff. We will work with
+  NETWORK GRAPH first.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>3. Think of the
+  SELECTIONS as your shopping cart. You go to different aisles in the
+  supermarket to acquire different types of items of interest. These could
+  include transcripts, classical phenotypes (longevity, brain weight, prepulse
+  inhibition, iron levels in midbrain). �Checking out� in this case involves
+  doing some analysis with the items in the cart.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>4. Different tools
+  handle different numbers of items. Most will handle up to 100 traits.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0014.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0014.htm
new file mode 100755
index 00000000..156a5132
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0014.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Aug-15-05: App transcript coexpression neighborhood">
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0014.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.png" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:82.15%;left:4.1%;width:96.15%;height:18.19%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'></div>
+<div style='position:absolute;top:-2.29%;left:.79%;width:105.43%;height:12.54%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='position:absolute;top:19.71%;left:1.25%;width:98.74%;
+height:61.97%'><span style='font-size:82%'><i>App</i></span><span
+style='font-size:82%'> transcript coexpression neighborhood</span><span
+style='mso-special-format:lastCR;display:none'><br>
+</span></div>
+</div>
+<img border=0 src="slide0014_image029.png" style='position:absolute;top:37.8%;
+left:1.72%;width:97.48%;height:62.19%'><img border=0
+src="slide0014_image031.png" style='position:absolute;top:11.13%;left:1.72%;
+width:79.47%;height:25.44%'><img border=0 src="slide0014_image033.png"
+style='position:absolute;top:10.6%;left:81.32%;width:18.8%;height:9.89%'></div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Output of the Network
+  Graph. Warm colors (orange and red) are positive correlations above 0.5
+  whereas cool colors (green and blue) are negative correlations. Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Arial size=3>1.</font><font
+  face=Helvetica size=3> All of the nodes (gene/transcripts) on this graph are
+  clickable.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>2. For this graph the
+  App expression values have �reverted� to their pre-Windsorized values.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>3. To generate this
+  graph, we used the default setting:<span style="mso-spacerun: yes">&nbsp;
+  </span>Size of 16 by 16 inches; Gene Symbols; Don't Show Correlations; Use
+  curved lines (aka �edges�).</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0014_image029.png b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0014_image029.png
new file mode 100755
index 00000000..8f560834
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0014_image029.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0014_image031.png b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0014_image031.png
new file mode 100755
index 00000000..8d72b4c1
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0014_image031.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0014_image033.png b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0014_image033.png
new file mode 100755
index 00000000..c1cd1c01
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0014_image033.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0014_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0014_notes_pane.htm
new file mode 100755
index 00000000..728a1a82
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0014_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Output of the Network
+  Graph. Warm colors (orange and red) are positive correlations above 0.5
+  whereas cool colors (green and blue) are negative correlations. Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Arial size=2>1.</font><font
+  face=Helvetica size=2> All of the nodes (gene/transcripts) on this graph are
+  clickable.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>2. For this graph the
+  App expression values have �reverted� to their pre-Windsorized values.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>3. To generate this
+  graph, we used the default setting:<span style="mso-spacerun: yes">&nbsp;
+  </span>Size of 16 by 16 inches; Gene Symbols; Don't Show Correlations; Use
+  curved lines (aka �edges�).</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0015.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0015.htm
new file mode 100755
index 00000000..c2a26be3
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0015.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0015.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.png" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:0%;left:.79%;width:93.64%;height:14.48%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=B style='mso-line-spacing:"-220 0 -216";mso-margin-left-alt:292;
+mso-text-indent-alt:0;position:absolute;top:0%;left:1.13%;width:97.59%;
+height:51.21%'><span style='mso-special-format:nobullet;display:none;
+color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>Correlations of </span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'><i>App</i></span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'> with classical traits</span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</div>
+<img border=0 src="slide0015_image034.png" style='position:absolute;top:28.97%;
+left:4.1%;width:78.27%;height:70.84%'><img border=0 src="slide0015_image035.png"
+style='position:absolute;top:8.12%;left:4.1%;width:33.5%;height:19.61%'></div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Going back to the Trait
+  Data and Analysis Form window, we have computed the correlations between
+  strain variation in App expression level and other classical phenotypes that
+  have already been measured in many of the same BXD strains.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Arial size=3>1.</font><font
+  face=Helvetica size=3>The number of common strains varies widely--in this
+  case from 14 to 23 strains.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>2. We can add these
+  traits (four are selected) to our BXD SELECTIONS window.</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0015_image034.png b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0015_image034.png
new file mode 100755
index 00000000..dafa2898
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0015_image034.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0015_image035.png b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0015_image035.png
new file mode 100755
index 00000000..35566d47
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0015_image035.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0015_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0015_notes_pane.htm
new file mode 100755
index 00000000..373646fe
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0015_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Going back to the Trait
+  Data and Analysis Form window, we have computed the correlations between
+  strain variation in App expression level and other classical phenotypes that
+  have already been measured in many of the same BXD strains.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Notes:</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Arial size=2>1.</font><font
+  face=Helvetica size=2>The number of common strains varies widely--in this
+  case from 14 to 23 strains.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>2. We can add these
+  traits (four are selected) to our BXD SELECTIONS window.</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0016.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0016.htm
new file mode 100755
index 00000000..9432ca4c
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0016.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0016.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.png" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:0%;left:.79%;width:99.47%;height:10.24%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=B style='mso-line-spacing:"-220 0 -216";mso-margin-left-alt:292;
+mso-text-indent-alt:0;position:absolute;top:0%;left:1.06%;width:98.66%;
+height:72.41%'><span style='mso-special-format:nobullet;display:none;
+color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>Network Graph of </span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'><i>App</i></span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'> with classical traits</span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</div>
+<img border=0 src="slide0016_image036.png" style='position:absolute;top:8.3%;
+left:3.31%;width:88.21%;height:90.63%'></div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>We have computed the
+  Network Graph, now using other types of traits.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Saline Hot Plate Latency
+  is the green node labeled 10020.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Freezing (fear) is the
+  green node labeled 10447.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=3>Notes:</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0016_image036.png b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0016_image036.png
new file mode 100755
index 00000000..baa1d807
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0016_image036.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0016_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0016_notes_pane.htm
new file mode 100755
index 00000000..c2a078c5
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0016_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>We have computed the
+  Network Graph, now using other types of traits.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Saline Hot Plate Latency
+  is the green node labeled 10020.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Freezing (fear) is the
+  green node labeled 10447.</font><br>
+  </td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Helvetica size=2>Notes:</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0017.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0017.htm
new file mode 100755
index 00000000..afb498b8
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0017.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0017.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.png" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:1.41%;left:3.31%;width:93.64%;height:14.48%;
+filter:DropShadow(Color=#000000, OffX=1, OffY=1)'>
+<div class=B style='mso-line-spacing:"-220 0 -216";mso-margin-left-alt:292;
+mso-text-indent-alt:0;position:absolute;top:0%;left:1.13%;width:97.59%;
+height:51.21%'><span style='mso-special-format:nobullet;display:none;
+color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>Summary of Part 1:</span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</div>
+<div style='position:absolute;top:10.77%;left:8.47%;width:100.79%;height:47.87%'>
+<div class=O1 style='mso-margin-left-alt:432'></div>
+<div class=O2 style='mso-margin-left-alt:720'></div>
+<div class=O3 style='mso-margin-left-alt:1008'></div>
+<div class=O4 style='mso-margin-left-alt:1296'></div>
+<div class=O style='mso-margin-left-alt:144;position:absolute;top:0%;
+left:0%;width:90.14%;height:11.07%'><span style='position:absolute;top:0%;
+left:2.76%;width:97.23%'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:"numbullet3\,1";
+position:absolute;left:-2.84%;font-family:Arial'>1.</span></span><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>You have learned the basics
+about searching for traits<br>
+</span></span></div>
+<div class=O style='mso-margin-left-alt:144;position:absolute;top:11.43%;
+left:0%;width:84.88%;height:11.07%'><span style='position:absolute;top:0%;
+left:2.94%;width:97.05%'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:"numbullet3\,1";
+position:absolute;left:-3.03%;font-family:Arial'>2.</span></span><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>You know some methods to check
+data quality<br>
+</span></span></div>
+<div class=O style='mso-margin-left-alt:144;position:absolute;top:22.5%;
+left:0%;width:84.88%;height:11.07%'><span style='position:absolute;top:0%;
+left:2.94%;width:97.05%'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:"numbullet3\,1";
+position:absolute;left:-3.03%;font-family:Arial'>3.</span></span><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>You know how to edit bad or
+suspicious data<br>
+</span></span></div>
+<div class=O style='mso-margin-left-alt:144;position:absolute;top:33.57%;
+left:0%;width:90.01%;height:11.07%'><span style='position:absolute;top:0%;
+left:2.77%;width:97.22%'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:"numbullet3\,1";
+position:absolute;left:-2.85%;font-family:Arial'>4.</span></span><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>You know how to review the
+basic statistics of a trait<br>
+</span></span></div>
+<div class=O style='mso-margin-left-alt:144;position:absolute;top:44.64%;
+left:0%;width:93.56%;height:22.14%'><span style='position:absolute;top:0%;
+left:2.66%;width:97.33%'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:"numbullet3\,1";
+position:absolute;left:-2.74%;font-family:Arial'>5.</span></span><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>You know how to generate a
+scattergram between two </span></span><span style='position:absolute;
+top:50.0%;left:2.66%;width:88.06%'><span style='font-family:"Gill Sans";
+font-size:200%;color:#E9EB5D;mso-color-index:3'>traits using the Traits
+Correlation tool<br>
+</span></span></div>
+<div class=O style='mso-margin-left-alt:144;position:absolute;top:66.78%;
+left:0%;width:100.0%;height:11.07%'><span style='position:absolute;top:0%;
+left:2.49%;width:97.5%'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:"numbullet3\,1";
+position:absolute;left:-2.56%;font-family:Arial'>6.</span></span><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>You know how to add items to
+your SELECTIONS window<br>
+</span></span></div>
+<div class=O style='mso-margin-left-alt:144;position:absolute;top:77.85%;
+left:0%;width:99.34%;height:22.14%'><span style='position:absolute;top:0%;
+left:2.51%;width:97.48%'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:"numbullet3\,1";
+position:absolute;left:-2.57%;font-family:Arial'>7.</span></span><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>You know how to generate a
+Network Graph of traits that </span></span><span style='position:absolute;
+top:51.66%;left:2.51%;width:82.93%'><span style='font-family:"Gill Sans";
+font-size:200%;color:#E9EB5D;mso-color-index:3'>co-vary. </span></span></div>
+</div>
+<div class=O style='position:absolute;top:67.31%;left:5.96%;width:105.29%;
+height:26.5%'><span style='position:absolute;top:0%;left:0%;width:100.0%'><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D;mso-color-index:
+3'>What does genetic covariance mean? The genetic covariance can </span></span><span
+style='position:absolute;top:20.0%;left:0%;width:96.1%'><span style='font-family:
+"Gill Sans";font-size:200%;color:#E9EB5D;mso-color-index:3'>be functional and
+mechanistic, but it can also be due to linkage </span></span><span
+style='position:absolute;top:40.0%;left:0%;width:95.97%'><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D;mso-color-index:
+3'>disequilibrium. Finally, it can be due to sampling error or poor </span></span><span
+style='position:absolute;top:60.66%;left:0%;width:87.92%'><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D;mso-color-index:
+3'>experimental design. Evaluate the biological plausibility of </span></span><span
+style='position:absolute;top:80.66%;left:0%;width:85.28%'><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D;mso-color-index:
+3'>correlations. Test and be skeptical.</span></span></div>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0018.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0018.htm
new file mode 100755
index 00000000..e1ee283b
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0018.htm
@@ -0,0 +1,25 @@
+<html>
+<head>
+<meta http-equiv=Content-Type content="text/html; charset=macintosh">
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Aug-15-05: Contact for comments and improvements:">
+<link rel=Stylesheet href="master03_stylesheet.css">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript><!--
+gId="slide0018.htm"
+if ( !parent.base.g_done && (parent.base.msie < 0 ) ) {
+	parent.base.g_done = 1;
+	document.location.replace( parent.base.GetHrefObj(parent.base.g_currentSlide).m_slideHref);
+}
+if( !IsNts() ) Redirect( "PPTSld", gId );
+var g_hasTrans = true, g_autoTrans = false, g_transSecs = 1;
+//-->
+</script><script for=window event=onload language=JavaScript><!--
+if( !IsSldOrNts() ) return;
+if( MakeNotesVis() ) return;
+LoadSld( gId );
+playList();MakeSldVis(1);
+//-->
+</script>
+</head>
+<body style='margin:0px;background-color:black' onclick="DocumentOnClick(event)"
+onresize="_RSW()" onkeypress="_KPH(event)">
+<div id=SlideObj class=sld style='position:absolute;top:0px;left:0px;
+width:755px;height:566px;font-size:16px;background-color:#484848;clip:rect(0%, 101%, 101%, 0%);
+visibility:hidden'><img src="master03_background.png" v:shapes="_x0000_s1026"
+style='position:absolute;top:0%;left:0%;width:100.0%;height:100.0%'>
+<div style='position:absolute;top:2.29%;left:2.51%;width:94.43%;height:9.89%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='mso-line-spacing:"-358 0 -1";position:absolute;top:19.64%;
+left:1.4%;width:97.47%;height:69.64%'><span style='font-size:73%'><i>Contact
+for comments and improvements:</i></span><span style='font-size:82%;mso-special-format:
+lastCR;display:none'><br>
+</span></div>
+</div>
+<div style='position:absolute;top:16.6%;left:6.62%;width:90.19%;height:24.38%;
+filter:DropShadow(Color=#000000, OffX=2, OffY=2)'>
+<div class=T style='mso-line-spacing:"-358 0 -1";position:absolute;top:0%;
+left:1.46%;width:97.35%;height:100.0%'><span style='position:absolute;
+top:0%;left:0%;width:100.0%'><span style='font-size:82%'>rwilliam@nb.utmem.edu<br>
+</span></span><span
+style='position:absolute;top:34.05%;left:4.67%;width:95.47%'><span
+style='font-size:82%'><br>
+</span></span><span style='position:absolute;
+top:68.11%;left:4.67%;width:95.47%'><span style='font-size:82%;mso-special-format:
+lastCR;display:none'><br>
+</span></span></div>
+</div>
+<div class=O style='position:absolute;top:27.56%;left:9.4%;width:50.59%;
+height:7.77%'><span style='font-family:"Gill Sans";font-size:300%;color:#E9EB5D'>kmanly@utmem.edu</span></div>
+<div class=O style='position:absolute;top:83.56%;left:4.37%;width:108.34%;
+height:15.9%'><span style='position:absolute;top:0%;left:0%;width:90.83%'><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D'>The </span><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D'><i>App</i></span><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D'> findings reviewed
+in this presentation are part of an </span></span><span style='position:absolute;
+top:33.33%;left:0%;width:100.0%'><span style='font-family:"Gill Sans";
+font-size:200%;color:#E9EB5D'>ongoing study by R. Williams. R. Homayouni, and
+R. Clark (July 15, </span></span><span style='position:absolute;top:66.66%;
+left:0%;width:84.35%'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D'>2005)</span><span style='font-family:"Gill Sans";font-size:300%;
+color:#E9EB5D;mso-special-format:lastCR;display:none'><br>
+</span></span></div>
+</div>
+<div id=NotesObj style='display:none'>
+<table style='color:white' border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=3>END</font><br>
+  </td>
+ </tr>
+</table>
+</div>
+<script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0018_image037.png b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0018_image037.png
new file mode 100755
index 00000000..a1cb20e4
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0018_image037.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0018_image038.png b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0018_image038.png
new file mode 100755
index 00000000..e06bd0db
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0018_image038.png
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0018_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0018_notes_pane.htm
new file mode 100755
index 00000000..e2cb435a
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0018_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>END</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0019.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0019.htm
new file mode 100755
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--- /dev/null
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@@ -0,0 +1,153 @@
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+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
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+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
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+}
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+}//-->
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+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.png" height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0 * g_height; myleft = 0.03 * g_width; myheight = 0.09 * g_height; mywidth = 0.84 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:"-277 0 -1";mso-margin-left-alt:232;
+mso-text-indent-alt:0;mso-line-spacing:"-277 0 -1";mso-margin-left-alt:232;
+mso-text-indent-alt:0'><span style='font-size:105%'><i>GeneNetwork and WebQTL:</i></span><span
+style='font-size:68%;mso-special-format:lastCR;display:none'><i><br>
+</i></span></div>
+</layer></div>
+</layer><script>
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+<div><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;font-size:213%;
+mso-text-raise:0%'><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-256 0 -216";mso-margin-left-alt:348;mso-text-indent-alt:
+56'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.62 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='mso-special-format:nobullet;display:none;
+color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>Part 1: How to study </span></span></layer><script>
+	mytop = 0.06 * g_height; myleft = 0.05 * g_width; myheight = 0.07 * g_height; mywidth = 0.57 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:106%;color:#E9EB5D;mso-color-index:
+3'>expression variation and </span></span></layer><script>
+	mytop = 0.11 * g_height; myleft = 0.05 * g_width; myheight = 0.07 * g_height; mywidth = 0.57 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:106%;color:#E9EB5D;mso-color-index:
+3'>covariation (slides 2&#8211;16)<br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.22 * g_height; myleft = 0 * g_width; myheight = 0.13 * g_height; mywidth = 0.67 * g_width;
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+</script>
+<div style='mso-line-spacing:"-256 0 -216";mso-margin-left-alt:348;mso-text-indent-alt:
+56'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.67 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='mso-special-format:nobullet;display:none;
+color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>Part 2. Discovering
+upstream </span></span></layer><script>
+	mytop = 0.06 * g_height; myleft = 0.05 * g_width; myheight = 0.07 * g_height; mywidth = 0.59 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:106%;color:#E9EB5D;mso-color-index:
+3'>modulators (slides 17&#8211;30)</span><span style='font-size:94%;color:#E9EB5D;
+mso-color-index:3;mso-special-format:lastCR;display:none'><br>
+</span></span></layer></div>
+</layer></div>
+</layer></div>
+</layer><script>
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+//-->
+</script></div>
+</layer><script>
+	mytop = 0.79 * g_height; myleft = 0.75 * g_width; myheight = 0.14 * g_height; mywidth = 0.1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.06 * g_height; mywidth = 0.1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-346 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:"Arial Rounded MT Bold";font-size:233%;color:#6E6E6E'>RNA</span><span
+style='font-family:"Arial Rounded MT Bold";font-size:300%;color:#6E6E6E;
+display:none'><br>
+</span></div>
+</layer><script>
+	mytop = 0.06 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.08 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-346 0 0";mso-margin-left-alt:17;mso-text-indent-alt:
+17'><span style='font-family:"Arial Rounded MT Bold";font-size:300%;color:#6E6E6E;
+mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.66 * g_height; myleft = 0.03 * g_width; myheight = 0.11 * g_height; mywidth = 0.8 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.8 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:217%;
+color:#E9EB5D;mso-color-index:3'><i>PowerPoint �Normal view� has notes that may
+be </i></span></span></layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.69 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:217%;
+color:#E9EB5D;mso-color-index:3'><i>useful companions to these slides.</i></span><span
+style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;mso-color-index:
+3;mso-special-format:lastCR;display:none'><br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.1 * g_height; myleft = 0.06 * g_width; myheight = 0.07 * g_height; mywidth = 0.55 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><span style='font-family:"Gill Sans";font-size:283%;
+color:#E9EB5D'><i>a PowerPoint Presentation</i></span><span style='font-family:
+"Gill Sans";font-size:317%;color:#E9EB5D;mso-special-format:lastCR;display:
+none'><i><br>
+</i></span></div>
+</layer><script>
+	mytop = 0.92 * g_height; myleft = 0.75 * g_width; myheight = 0.03 * g_height; mywidth = 0.26 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><span style='font-family:Helvetica;font-size:167%;
+color:#E9EB5D'><i>RWW 07.23.2005</i></span></div>
+</layer><script>
+	mytop = 0.81 * g_height; myleft = 0.03 * g_width; myheight = 0.11 * g_height; mywidth = 0.77 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.68 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><span style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;
+mso-color-index:3'><i>You can also download this PowerPoint at<br>
+</i></span></div>
+</layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.77 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><span style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;
+mso-color-index:3'><i>ftp://atlas.utmem.edu/public/webqtl_demo2.ppt </i></span><span
+style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;mso-color-index:
+3;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Welcome to a short
+   demonstration of the GeneNetwork and its WebQTL module. Please adjust the
+   size of the windows on your monitor so that you can see part of this page,
+   as well as GeneNetwork windows. WebQTL produces a large number of new
+   windows, so you may need to modify your browser preferences to permit
+   pop-ups. In this demonstration, we explore one important transcript
+   expressed in the brain: the amyloid beta precursor protein messenger RNA. A
+   protein product of this mRNA, the APP protein, is associated with
+   Alzheimer�s disease.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>My thanks to Dr. Robert
+   F. Clark and Wenli Cai for testing this PowerPoint demonstration and making
+   many improvements.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>(Initial version of
+   June 2003 by Rob Williams. Edits July 13, 2005 by RW and RFC. Edit July 14,
+   2005 by WC. Final edits by RF Clark, July 22, 2005.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0019_notes_pane.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0019_notes_pane.htm
new file mode 100755
index 00000000..e2cb435a
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0019_notes_pane.htm
@@ -0,0 +1,5 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<link id=Main-File rel=Main-File href="webqtl_demo2_part1.ppt.htm">
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+</head>
+<body bgcolor=black text=white>
+<table border=0 width="100%">
+ <tr>
+  <td width=5 nowrap></td>
+  <td width="100%"></td>
+ </tr>
+ <tr>
+  <td colspan=1></td>
+  <td align=left colspan=1><font face=Verdana size=2>END</font><br>
+  </td>
+ </tr>
+</table>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0020.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0020.htm
new file mode 100755
index 00000000..da8b9759
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0020.htm
@@ -0,0 +1,172 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
+		min = window.innerHeight/20;
+		
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+}
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+</span></div>
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+</layer></div>
+</layer></div>
+</layer><script>
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+mso-text-raise:0%'><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><span style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;
+mso-color-index:3'>Enter<br>
+</span></div>
+</layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-224 0 0"'><span style='font-family:"Gill Sans";
+font-size:217%;color:#E9EB5D;mso-color-index:3'><i>APP</i></span><span
+style='font-family:"Gill Sans";font-size:250%;color:#E9EB5D;mso-color-index:
+3;mso-special-format:lastCR;display:none'><i><br>
+</i></span></div>
+</layer></div>
+</layer></div>
+</layer><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
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+</script>
+<div><span style='font-family:"Gill Sans";font-size:217%;color:#E9EB5D;
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+</span></div>
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+</layer></div>
+</layer></div>
+</layer><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div>
+<layer>
+ <div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+ font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
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+ mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;font-size:213%;
+ mso-text-raise:0%'></div>
+</layer>
+<layer>
+ <div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+ font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+ mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;font-size:213%;
+ mso-text-raise:0%'></div>
+</layer>
+<script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 1.1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:nobullet;text-align:left;font-family:"Gill Sans";
+font-weight:normal;font-style:normal;text-decoration:none;text-shadow:none;
+text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;
+font-size:213%;mso-text-raise:0%;mso-line-spacing:"-220 0 -216";mso-margin-left-alt:
+348;mso-text-indent-alt:0;mso-line-spacing:"-220 0 -216";mso-margin-left-alt:
+348;mso-text-indent-alt:0'><span style='mso-special-format:nobullet;display:
+none;color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>PART 1: How to study
+variation and covariation</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.15 * g_height; myleft = 0.85 * g_width; myheight = 0.22 * g_height; mywidth = 0.16 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.21 * g_height; mywidth = 0.15 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
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+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:217%;
+color:#E9EB5D;mso-color-index:3'>Choose<span style="mso-spacerun: yes">&nbsp;
+</span></span></span></layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.13 * g_width;
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+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:217%;
+color:#E9EB5D;mso-color-index:3'>species, </span></span></layer><script>
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+style='text-align:left'><span style='font-family:"Gill Sans";font-size:217%;
+color:#E9EB5D;mso-color-index:3'>group, </span></span></layer><script>
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+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:217%;
+color:#E9EB5D;mso-color-index:3'>and type</span></span></layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.71 * g_height; myleft = 0.48 * g_width; myheight = 0.13 * g_height; mywidth = 0.12 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.48 * g_width;
+yy = 0.71 * g_height;
+ht = 0.13 * g_height;
+wd = 0.12 * g_width;
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+//-->
+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Please link to the web
+   site:<span style="mso-spacerun: yes">&nbsp;
+   </span>http://www.genenetwork.org</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>To begin a search you
+   make choices about what species, group, and database to explore.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>For this demonstration
+   enter APP as above and click on the SEARCH button. Make sure that the
+   DEFAULT SETTINGS are species = Mouse, Group = BXD, Type = Whole Brain, and
+   Database = INIA BRAIN mRNA M430 (Apr05) PDNN.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Notes:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>1. The GeneNetwork and
+   WebQTL are often used to work with public data sets. However, it is possible
+   to enter and analyze your own data for specific genetic reference
+   populations such as the BXD genetic reference population of mice or the HXB
+   strains of rat. Entering your own data is a more advanced topic, but if you
+   click on the HOME pop-down menu (upper left), you will see �Enter Trait
+   Data� that will explain the process.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Arial size=3>2.</font><font
+   face=Helvetica size=3> For help on advanced searching methods read the left
+   side of the page (INTRODUCTION).<span style="mso-spacerun: yes">&nbsp;
+   </span>If you make a search term too complex, you may get no hits (try
+   entering �amyloid beta� for example). If you make it too simple, you may
+   also get too many.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Arial size=3>3.</font><font
+   face=Helvetica size=3> Use the asterisk * as a wildcard. For example, to
+   find all <i>Hoxb</i> transcripts, search for Hoxb*.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Arial size=3>4.</font><font
+   face=Helvetica size=3> In some cases you can also research for transcripts
+   and genes using special search strings such as �</font><font face=Geneva
+   size=3>Mb = (Chr1, 100 102)� to find all genes on Chromosome 1 between 98
+   and 104 megabases (don�t actually use the quotes). Details are described at </font><font
+   face=Verdana size=3>http://www.genenetwork.org/searchHelp.html</font><font
+   face=Geneva size=3>.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>5.<span
+   style="mso-spacerun: yes">&nbsp;&nbsp; </span>These INFO buttons provide
+   links to data about the different data types. Try them.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>6.<span
+   style="mso-spacerun: yes">&nbsp; </span>The SET TO DEFAULT button is used to
+   change the database default setting to match your typical search categories.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0021.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0021.htm
new file mode 100755
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+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
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+document.SlideLayer.clip.width = g_width;
+function new_font_size() {
+	var size = 11 * g_width / g_origWidth;
+	if ( size < 1 ) size = 1;
+	return size+"pt";
+}
+</script>
+<div id=SlideObj class=sld style='position:relative;font-size:&{new_font_size()};'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 1 * g_height; mywidth = 1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.png" height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.34 * g_height; myleft = 0.59 * g_width; myheight = 0.14 * g_height; mywidth = 0.12 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.59 * g_width;
+yy = 0.34 * g_height;
+ht = 0.14 * g_height;
+wd = 0.12 * g_width;
+document.write(
+'<img border=0 src="slide0003_image005.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.09 * g_height; mywidth = 1.05 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 1.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div>
+<layer>
+ <div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+ font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+ mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;font-size:213%;
+ mso-text-raise:0%'></div>
+</layer>
+<layer>
+ <div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+ font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+ mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;font-size:213%;
+ mso-text-raise:0%'></div>
+</layer>
+<layer>
+ <div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+ font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+ mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;font-size:213%;
+ mso-text-raise:0%'></div>
+</layer>
+<layer>
+ <div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+ font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+ mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;font-size:213%;
+ mso-text-raise:0%'></div>
+</layer>
+<script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 1.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:nobullet;text-align:left;font-family:"Gill Sans";
+font-weight:normal;font-style:normal;text-decoration:none;text-shadow:none;
+text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;
+font-size:213%;mso-text-raise:0%;mso-line-spacing:"-220 0 -216";mso-margin-left-alt:
+348;mso-text-indent-alt:0;mso-line-spacing:"-220 0 -216";mso-margin-left-alt:
+348;mso-text-indent-alt:0'><span style='mso-special-format:nobullet;display:
+none;color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>Please also use the
+Glossary, FAQ, and News</span></div>
+</layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.1 * g_height; myleft = 0.01 * g_width; myheight = 0.6 * g_height; mywidth = 0.69 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.01 * g_width;
+yy = 0.1 * g_height;
+ht = 0.6 * g_height;
+wd = 0.69 * g_width;
+document.write(
+'<img border=0 src="slide0003_image006.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.09 * g_height; myleft = 0.18 * g_width; myheight = 0.13 * g_height; mywidth = 0.12 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.18 * g_width;
+yy = 0.09 * g_height;
+ht = 0.13 * g_height;
+wd = 0.12 * g_width;
+document.write(
+'<img border=0 src="slide0003_image008.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.49 * g_height; myleft = 0.38 * g_width; myheight = 0.48 * g_height; mywidth = 0.6 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.38 * g_width;
+yy = 0.49 * g_height;
+ht = 0.48 * g_height;
+wd = 0.6 * g_width;
+document.write(
+'<img border=0 src="slide0003_image009.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>SHORT DETOUR to the
+   HELP menu. If you are new to the GeneNetwork, you may find it helpful to
+   review the The Glossary and FAQ pages shown above. We are in the process of
+   making �live� demos for some of the key modules in the GeneNetwork. Check
+   the NEWS every month or two to find out about new features.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0022.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0022.htm
new file mode 100755
index 00000000..663a5f0f
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0022.htm
@@ -0,0 +1,140 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content="Aug-15-05: Search results">
+<style media=print>
+<!--.sld
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+-->
+</style>
+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
+		min = window.innerHeight/20;
+		
+	return min+"pt";
+}
+var SoundEnabled = navigator.plugins && navigator.plugins["LiveAudio"];
+function restore() {
+	self.location.reload();
+}
+function set_size() {
+	document.SlideLayer.width = window.innerWidth;
+	document.SlideLayer.height = window.innerHeight;
+}
+document.captureEvents(Event.MOUSEDOWN);
+document.captureEvents(Event.KEYPRESS);
+document.onkeypress = _KPH ;
+document.onmousedown = _KPH ;
+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0022.htm");
+}//-->
+</script>
+</head>
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+
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+else
+	g_width = g_origWidth * g_height / g_origHeight;
+	
+g_top = (window.innerHeight - g_height) / 2;
+g_left = (window.innerWidth - g_width) / 2;
+
+document.write( '<layer id=SlideLayer BGCOLOR=#484848 background="" top=' + g_top + ' left=' + g_left + ' height=' + g_height + ' width=' + g_width + ' >' );
+document.SlideLayer.clip.top = 0;
+document.SlideLayer.clip.left = 0;
+document.SlideLayer.clip.height = g_height;
+document.SlideLayer.clip.width = g_width;
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+	var size = 11 * g_width / g_origWidth;
+	if ( size < 1 ) size = 1;
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+</script>
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+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.png" height=' + ht + ' width=' + wd + '>' );
+//-->
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+</layer><script>
+	mytop = 0.09 * g_height; myleft = 0.03 * g_width; myheight = 0.9 * g_height; mywidth = 0.68 * g_width;
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+</script>
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+</script></div>
+</layer><script>
+	mytop = 0.63 * g_height; myleft = 0.63 * g_width; myheight = 0.06 * g_height; mywidth = 0.14 * g_width;
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+<div><script language=JavaScript><!--
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+yy = 0.63 * g_height;
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+document.write(
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+//-->
+</script></div>
+</layer><script>
+	mytop = 0.45 * g_height; myleft = 0.8 * g_width; myheight = 0.47 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.21 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-224 0 0"'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:217%;
+color:#E9EB5D;mso-color-index:3'>Highlight </span></span></layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:217%;
+color:#E9EB5D;mso-color-index:3'>this probe </span></span></layer><script>
+	mytop = 0.1 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:217%;
+color:#E9EB5D;mso-color-index:3'>set in red </span></span></layer><script>
+	mytop = 0.15 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:217%;
+color:#E9EB5D;mso-color-index:3'>and</span><span style='font-family:"Gill Sans";
+font-size:217%;color:#E9EB5D;mso-color-index:3;display:none'><i><br>
+</i></span></span></layer></div>
+</layer><script>
+	mytop = 0.2 * g_height; myleft = 0 * g_width; myheight = 0.26 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-line-spacing:"-224 0 0"'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:217%;
+color:#E9EB5D;mso-color-index:3'>click. You </span></span></layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:217%;
+color:#E9EB5D;mso-color-index:3'>do NOT </span></span></layer><script>
+	mytop = 0.1 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:217%;
+color:#E9EB5D;mso-color-index:3'>have to </span></span></layer><script>
+	mytop = 0.15 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:217%;
+color:#E9EB5D;mso-color-index:3'>select the </span></span></layer><script>
+	mytop = 0.2 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:217%;
+color:#E9EB5D;mso-color-index:3'>checkbox</span><span style='font-family:"Gill Sans";
+font-size:250%;color:#E9EB5D;mso-color-index:3;mso-special-format:lastCR;
+display:none'><br>
+</span></span></layer></div>
+</layer></div>
+</layer><script>
+	mytop = -0.04 * g_height; myleft = 0.01 * g_width; myheight = 0.18 * g_height; mywidth = 0.84 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.05 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.82 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%'><span style='font-size:82%'>Search results</span><span
+style='mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>RESULTS OF THE APP
+   SEARCH.<span style="mso-spacerun: yes">&nbsp; </span>A search of the INIA
+   Brain database generates 18 matches, 10 of which are shown above. The
+   GeneNetwork will display several hundred matches in pages of 40 each. If a
+   search generates a larger numbers of hits, then you will need to refine
+   search terms.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Notes:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>1. APP is a great
+   transcript to introduce you to the complexity and power of new array
+   platforms that often provide �alternative� expression estimates for single
+   genes. There are seven probe sets that target different parts of the APP
+   transcript. Which of the alternative measurements is most appropriate and
+   informative? Have a look at the FAQ page for more on this topic, but general
+   advice: 1. be skeptical and try to validate that the correct transcript and
+   gene is being measured; 2. check what part of the transcript is
+   complementary to the probes; 3. evaluate the performance of individual
+   probes based on expression level, signal-to-noise and other error terms such
+   as the standard deviation and error.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>2. In this particular
+   case we have highlighted and selected # 5 on this SEARCH RESULTS page. The
+   annotation for this probe set mentions that it targets the last three exons
+   and the 3� untranslated region (UTR) of the amyloid precursor protein (APP).<span
+   style="mso-spacerun: yes">&nbsp; </span>That is just what we want.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>3. Most probe sets have
+   not been annotated in as much detail as App. Refer tot the FAQ to learn how
+   to annotate probe sets yourself.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0023.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0023.htm
new file mode 100755
index 00000000..10a6218a
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0023.htm
@@ -0,0 +1,128 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
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+}//-->
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:nobullet;text-align:left;font-family:"Gill Sans";
+font-weight:normal;font-style:normal;text-decoration:none;text-shadow:none;
+text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;
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+display:none;color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3'>First page of data: The
+Trait Data and Analysis Form</span><span style='font-size:106%;color:#E9EB5D;
+mso-color-index:3;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
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+yy = 0.34 * g_height;
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+//-->
+</script></div>
+</layer><script>
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+</script>
+<div><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.14 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:200%;color:#E9EB5D'><i>Click </i></span></span></layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.14 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:200%;color:#E9EB5D'><i>here<br>
+</i></span></span></layer><script>
+	mytop = 0.1 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.15 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><span style='font-size:200%;color:#E9EB5D'><i>to learn<br>
+</i></span></div>
+</layer><script>
+	mytop = 0.16 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.14 * g_width;
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+</script>
+<div><span style='font-size:200%;color:#E9EB5D'><i>about<br>
+</i></span></div>
+</layer><script>
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+</script>
+<div><span style='font-size:200%;color:#E9EB5D'><i>data<br>
+</i></span></div>
+</layer><script>
+	mytop = 0.27 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.14 * g_width;
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+</script>
+<div><span style='font-size:200%;color:#E9EB5D'><i>source</i></span></div>
+</layer></div>
+</layer></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>The Trait Data and
+   Analysis Form is the single most important page from the point of view of
+   working with GeneNetwork data. Please read the text carefully. Explore the
+   links, but do not close this page. We will need it many more times in this
+   demonstration.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Notes:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>1. What is this
+   database? It is called INIA Brain mRNA M430 (Apr05) PDNN, but what does that
+   actually mean. How much of the brain was used? How were the animals
+   processed? Most of these types of questions can be answered by clicking on
+   the DATABASE link.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>2. Transcript/gene
+   LOCATION data is usually from the most recent assembly. You can VERIFY the
+   location of the probes and probe set using the two VERIFY buttons. VERIFY
+   UCSC performs a sequence alignment (BLAT analysis) of the probes to the most
+   recent assembly.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>3. The PROBE TOOL
+   button provides you with highly detailed information on the probe sequences
+   used to assemble the probe set. For example, in this case you can find out
+   which probes correspond to which of the three exons. You can also review the
+   performance of the individual probes. Please check the GLOSSARY for
+   additional details on probes.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>4. The identifiers
+   (IDs) provide links to other key resources.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0024.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0024.htm
new file mode 100755
index 00000000..97f09734
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0024.htm
@@ -0,0 +1,93 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<style media=print>
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+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
+		min = window.innerHeight/20;
+		
+	return min+"pt";
+}
+var SoundEnabled = navigator.plugins && navigator.plugins["LiveAudio"];
+function restore() {
+	self.location.reload();
+}
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+	document.SlideLayer.width = window.innerWidth;
+	document.SlideLayer.height = window.innerHeight;
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+document.captureEvents(Event.MOUSEDOWN);
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+ LoadNavSld("slide0024.htm");
+}//-->
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+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
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+</layer><script>
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+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.97 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
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+<div style='mso-special-format:nobullet;text-align:left;font-family:"Gill Sans";
+font-weight:normal;font-style:normal;text-decoration:none;text-shadow:none;
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+348;mso-text-indent-alt:56'><span style='mso-special-format:nobullet;
+display:none;color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>Data sources: Metadata
+for each resource</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.06 * g_height; myleft = 0.03 * g_width; myheight = 0.92 * g_height; mywidth = 0.6 * g_width;
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+</script>
+<div><script language=JavaScript><!--
+xx = 0.03 * g_width;
+yy = 0.06 * g_height;
+ht = 0.92 * g_height;
+wd = 0.6 * g_width;
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+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Most of the database
+   components and resources in The GeneNetwork are linked to metadata pages
+   that provide a human-readable summary of how, why, where, when, and with
+   whom the data were generated. Before you get too involved with a data set,
+   it is naturally important to read this information. While the data in The
+   GeneNetwork may be accessible and useful, that does not always mean that the
+   data is public domain and available for you to use in publication or for
+   profit purposes. If you want to know more about the data ownership and
+   usage, please read through the POLICIES pop-down menu items.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0025.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0025.htm
new file mode 100755
index 00000000..32820d64
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0025.htm
@@ -0,0 +1,134 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
+		min = window.innerHeight/20;
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+	return min+"pt";
+}
+var SoundEnabled = navigator.plugins && navigator.plugins["LiveAudio"];
+function restore() {
+	self.location.reload();
+}
+function set_size() {
+	document.SlideLayer.width = window.innerWidth;
+	document.SlideLayer.height = window.innerHeight;
+}
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+document.captureEvents(Event.KEYPRESS);
+document.onkeypress = _KPH ;
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+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0025.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
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+<script>
+
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+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
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+<div><script>
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+<div style='mso-special-format:nobullet;text-align:left;font-family:"Gill Sans";
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+text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;
+font-size:213%;mso-text-raise:0%;mso-line-spacing:"-220 0 -216";mso-margin-left-alt:
+348;mso-text-indent-alt:56;mso-line-spacing:"-220 0 -216";mso-margin-left-alt:
+348;mso-text-indent-alt:56'><span style='mso-special-format:nobullet;
+display:none;color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3'>Expression estimates for </span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3'><i>App</i></span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3'> on the Trait Data form</span><span
+style='font-size:81%;color:#E9EB5D;mso-color-index:3'> </span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.81 * g_height; myleft = 0.02 * g_width; myheight = 0.11 * g_height; mywidth = 1.1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.09 * g_height; mywidth = 1.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 1.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:183%;
+color:#E9EB5D;mso-color-index:3'>Trait data for each strain with SE when known.
+For array data the scale is </span></span></layer><script>
+	mytop = 0.04 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.92 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:183%;
+color:#E9EB5D;mso-color-index:3'>~ log base 2.<span style="mso-spacerun:
+yes">&nbsp;&nbsp; </span></span><span style='font-size:167%;color:#E9EB5D;
+mso-color-index:3'>F1 data = 16.723 = 2^16.723 = 108,174</span></span></layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0.02 * g_width; myheight = 0.72 * g_height; mywidth = 0.51 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.02 * g_width;
+yy = 0.07 * g_height;
+ht = 0.72 * g_height;
+wd = 0.51 * g_width;
+document.write(
+'<img border=0 src="slide0007_image016.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.33 * g_height; myleft = 0.57 * g_width; myheight = 0.13 * g_height; mywidth = 0.3 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.57 * g_width;
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+ht = 0.13 * g_height;
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+'<img border=0 src="slide0007_image017.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.47 * g_height; myleft = 0.57 * g_width; myheight = 0.18 * g_height; mywidth = 0.36 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.18 * g_height; mywidth = 0.35 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.33 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:167%;color:#E9EB5D;mso-color-index:
+3'>These values can all </span></span></layer><script>
+	mytop = 0.04 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.33 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:167%;color:#E9EB5D;mso-color-index:
+3'>be changed by the </span></span></layer><script>
+	mytop = 0.09 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.35 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:167%;color:#E9EB5D;mso-color-index:
+3'>user. (Yes, there is a </span></span></layer><script>
+	mytop = 0.13 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 0.33 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:167%;color:#E9EB5D;mso-color-index:
+3'>RESET)</span></span></layer></div>
+</layer></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>This slide shows you
+   the lower parts of the Trait Data and Analysis Form with the data for the
+   first set of BXD strains</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0026.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0026.htm
new file mode 100755
index 00000000..7dac49e1
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0026.htm
@@ -0,0 +1,130 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<style media=print>
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+}//-->
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+	
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+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.png" height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.08 * g_height; mywidth = 0.98 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.95 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:nobullet;text-align:left;font-family:"Gill Sans";
+font-weight:normal;font-style:normal;text-decoration:none;text-shadow:none;
+text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;
+font-size:213%;mso-text-raise:0%;mso-line-spacing:"-220 0 -216";mso-margin-left-alt:
+348;mso-text-indent-alt:56;mso-line-spacing:"-220 0 -216";mso-margin-left-alt:
+348;mso-text-indent-alt:56'><span style='mso-special-format:nobullet;
+display:none;color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>Critiquing the </span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'><i>App</i></span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'> data the Trait Data</span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.74 * g_height; myleft = 0.02 * g_width; myheight = 0.13 * g_height; mywidth = 1.1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.12 * g_height; mywidth = 1.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 1.08 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:150%;
+color:#E9EB5D;mso-color-index:3'>Use the BASIC STATISTICS button to evaluate
+the App data. You will find that App data </span></span></layer><script>
+	mytop = 0.03 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 1.09 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:150%;
+color:#E9EB5D;mso-color-index:3'>from the different strains are not equally
+trustworthy. BXD8 is an obvious outlier without </span></span></layer><script>
+	mytop = 0.07 * g_height; myleft = 0 * g_width; myheight = 0.04 * g_height; mywidth = 1.03 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:150%;
+color:#E9EB5D;mso-color-index:3'>replication (no error bar)</span><span
+style='font-size:150%;color:#E9EB5D;mso-color-index:3'>. BXD33 is also
+suspiciously low. BXD5 is noisy. </span><span style='font-family:"Gill Sans";
+font-size:150%;color:#E9EB5D;mso-color-index:3;mso-special-format:lastCR;
+display:none'><br>
+</span></span></layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0.02 * g_width; myheight = 0.18 * g_height; mywidth = 0.16 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.02 * g_width;
+yy = 0.07 * g_height;
+ht = 0.18 * g_height;
+wd = 0.16 * g_width;
+document.write(
+'<img border=0 src="slide0008_image018.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0.18 * g_width; myheight = 0.66 * g_height; mywidth = 0.73 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
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+yy = 0.08 * g_height;
+ht = 0.66 * g_height;
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+'<img border=0 src="slide0008_image019.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.87 * g_height; myleft = 0.59 * g_width; myheight = 0.13 * g_height; mywidth = 0.3 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.59 * g_width;
+yy = 0.87 * g_height;
+ht = 0.13 * g_height;
+wd = 0.3 * g_width;
+document.write(
+'<img border=0 src="slide0008_image021.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>The Basic Statistics
+   page allows you to evaluate some aspects of the data quality. In this case,
+   BXD8 is a potential problem. An outlier of this type may be generated by a
+   technical artifact (bad sample?). However, it is also possible that BXD8
+   just has genuine low endogenous expression of App and may therefore be a
+   particularly valuable model for research. There are different ways to treat
+   problematic data of these types. One way is simply to discard this datum.
+   The other way is to prevent outliers from have too much influence
+   quantitatively, while leaving them in their low (or high positions). This is
+   called windsorizing the data (after King Henry the VIII who had a habit of
+   chopping heads). In this case, we have windsorized the BXD8 to a value of 16.0
+   and the BXD33 to a value of 16.02. Rank is retained. We are making a bet
+   that the two lowest strains are really low, but we are hedging our bet and
+   just making them a little lower than BXD90. This removes their �undue�
+   influence.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Notes:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>1. It turns out that
+   BXD8 is a strain with many odd phenotypes. The whole strain is essentially
+   an outlier for many traits. Therefore, the low App expression data may be
+   quite accurate. Still, it would be comforting to have at least two more
+   replicates.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0027.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0027.htm
new file mode 100755
index 00000000..0a23d59d
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0027.htm
@@ -0,0 +1,93 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
+		min = window.innerHeight/20;
+		
+	return min+"pt";
+}
+var SoundEnabled = navigator.plugins && navigator.plugins["LiveAudio"];
+function restore() {
+	self.location.reload();
+}
+function set_size() {
+	document.SlideLayer.width = window.innerWidth;
+	document.SlideLayer.height = window.innerHeight;
+}
+document.captureEvents(Event.MOUSEDOWN);
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+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0027.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
+bgcolor="#000000">
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+
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.9 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:nobullet;text-align:left;font-family:"Gill Sans";
+font-weight:normal;font-style:normal;text-decoration:none;text-shadow:none;
+text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;
+font-size:213%;mso-text-raise:0%;mso-line-spacing:"-220 0 -216";mso-margin-left-alt:
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+348;mso-text-indent-alt:56'><span style='mso-special-format:nobullet;
+display:none;color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'><i>App</i></span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'> expression after
+windsorizing</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0.02 * g_width; myheight = 0.83 * g_height; mywidth = 0.94 * g_width;
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+//-->
+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Now we get a much
+   better feel for the variation in the error among the cases. Those without
+   error bars are of course the �noisiest� of all. This data set is not
+   complete yet (the aim is to acquire at least one male-female sample for each
+   BXD strain).</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0028.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0028.htm
new file mode 100755
index 00000000..cde4a136
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0028.htm
@@ -0,0 +1,104 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
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+</script>
+<meta name=Description content=Aug-15-05>
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+<script language=JavaScript>
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+</layer><script>
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+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.91 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:nobullet;text-align:left;font-family:"Gill Sans";
+font-weight:normal;font-style:normal;text-decoration:none;text-shadow:none;
+text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;
+font-size:213%;mso-text-raise:0%;mso-line-spacing:"-220 0 -216";mso-margin-left-alt:
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+348;mso-text-indent-alt:56'><span style='mso-special-format:nobullet;
+display:none;color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>Discovering shared
+expression patterns</span></div>
+</layer></div>
+</layer><script>
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+<div><script language=JavaScript><!--
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+//-->
+</script></div>
+</layer><script>
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+</script>
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+'<img border=0 src="slide0010_image024.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Finally, we can now
+   start an analysis.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>We ask a simple
+   question:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Do differences in this
+   particular App transcript steady-state abundance level correlate with those
+   of any other transcripts in the same INIA Brain mRNA M430 data set?</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Notes:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Arial size=3>1.</font><font
+   face=Helvetica size=3>You can CHOOSE many other DATABASES at this point if
+   you want, but for now let�s stick with the default.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>2. There are different
+   ways to sort the correlations. The most obvious is by p-value (most
+   significant values at the top of the list), but it is also interesting to
+   sort the top 100 or top 500 by their gene symbol (gene ID) or by their
+   chromosomal location (position).</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>3. If you don�t want
+   your analysis to be sensitive to outliers, then you may want to choose to
+   use the Spearman Rank Order method of calculating correlations.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0029.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0029.htm
new file mode 100755
index 00000000..c296b9e9
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0029.htm
@@ -0,0 +1,93 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
+		min = window.innerHeight/20;
+		
+	return min+"pt";
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+function restore() {
+	self.location.reload();
+}
+function set_size() {
+	document.SlideLayer.width = window.innerWidth;
+	document.SlideLayer.height = window.innerHeight;
+}
+document.captureEvents(Event.MOUSEDOWN);
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+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0029.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
+bgcolor="#000000">
+<script>
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+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
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+</layer><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.14 * g_height; mywidth = 0.93 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.9 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:nobullet;text-align:left;font-family:"Gill Sans";
+font-weight:normal;font-style:normal;text-decoration:none;text-shadow:none;
+text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;
+font-size:213%;mso-text-raise:0%;mso-line-spacing:"-220 0 -216";mso-margin-left-alt:
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+348;mso-text-indent-alt:56'><span style='mso-special-format:nobullet;
+display:none;color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>Transcript neighborhoods</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.07 * g_height; myleft = 0.02 * g_width; myheight = 0.91 * g_height; mywidth = 0.85 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.02 * g_width;
+yy = 0.07 * g_height;
+ht = 0.91 * g_height;
+wd = 0.85 * g_width;
+document.write(
+'<img border=0 src="slide0011_image025.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>The Traits Correlation
+   output window (Correlation Results) compares App expression data with all
+   other traits in this INIA Brain data set. The most significant 100 or 500
+   transcripts are sorted by their p-values. The top correlation is that of the
+   probe set to itself (often a value of 1.0, but in this case we modified the
+   App values manually by windsorizing the data). The next best correlation is
+   to another App probe set. The fourth correlation is interesting and suggests
+   that there may be a link between App and a particular type of ataxia
+   (Atcay).</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Notes:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Arial size=3>1.</font><font
+   face=Helvetica size=3>Use the checkboxes to the far left to select traits
+   that you want to study together. Once you have selected interesting traits,
+   click on the ADD SELECTION button. This puts all of the selected traits into
+   a SELECTIONS WINDOW for other types of analysis.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>2. The p-value is not
+   corrected for multiple tests. A conservative approach for array data would
+   be to assume 10,000 nominally independent tests. Subtract 4 from the
+   exponent and if the value is still smaller than 0.05 you may have a real
+   correlation.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>3. The LITERATURE
+   CORRELATION is a data type generated by Drs. Ramin Homayouni and Michael
+   Berry. Click on the header column by the asterisk for more information on
+   this highly useful data type.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>4. We are using Pearson
+   product moment correlations rather that the Spearman rank order correlation.
+   But you can select either in the previous step.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0030.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0030.htm
new file mode 100755
index 00000000..b84e4aad
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0030.htm
@@ -0,0 +1,93 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<style media=print>
+<!--.sld
+	{left:0px !important;
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+	height:4.5in !important;
+	font-size:76% !important;}
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+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
+		min = window.innerHeight/20;
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+	document.SlideLayer.height = window.innerHeight;
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+	g_height = g_width * g_origHeight / g_origWidth;
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+	g_width = g_origWidth * g_height / g_origHeight;
+	
+g_top = (window.innerHeight - g_height) / 2;
+g_left = (window.innerWidth - g_width) / 2;
+
+document.write( '<layer id=SlideLayer BGCOLOR=#484848 background="" top=' + g_top + ' left=' + g_left + ' height=' + g_height + ' width=' + g_width + ' >' );
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+document.SlideLayer.clip.left = 0;
+document.SlideLayer.clip.height = g_height;
+document.SlideLayer.clip.width = g_width;
+function new_font_size() {
+	var size = 11 * g_width / g_origWidth;
+	if ( size < 1 ) size = 1;
+	return size+"pt";
+}
+</script>
+<div id=SlideObj class=sld style='position:relative;font-size:&{new_font_size()};'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 1 * g_height; mywidth = 1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.png" height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.14 * g_height; mywidth = 0.93 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.9 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:nobullet;text-align:left;font-family:"Gill Sans";
+font-weight:normal;font-style:normal;text-decoration:none;text-shadow:none;
+text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;
+font-size:213%;mso-text-raise:0%;mso-line-spacing:"-220 0 -216";mso-margin-left-alt:
+348;mso-text-indent-alt:56;mso-line-spacing:"-220 0 -216";mso-margin-left-alt:
+348;mso-text-indent-alt:56'><span style='mso-special-format:nobullet;
+display:none;color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'><i>App</i></span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'> and </span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'><i>Atcay</i></span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'> transcript scatterplot </span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0.05 * g_width; myheight = 0.91 * g_height; mywidth = 0.66 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.05 * g_width;
+yy = 0.08 * g_height;
+ht = 0.91 * g_height;
+wd = 0.66 * g_width;
+document.write(
+'<img border=0 src="slide0012_image026.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>By clicking on the
+   CORRELATION of the Atcay transcript to the App transcript, you can generate
+   a Correlation plot between these two transcripts. In this App and Atcay
+   scatterplot, each point is a strain mean value. For example, BXD33 and BXD8
+   have low App and Atcay expressions. The two parental strains and the F1 are
+   also included in this plot.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0031.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0031.htm
new file mode 100755
index 00000000..9a54b689
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0031.htm
@@ -0,0 +1,93 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
+		min = window.innerHeight/20;
+		
+	return min+"pt";
+}
+var SoundEnabled = navigator.plugins && navigator.plugins["LiveAudio"];
+function restore() {
+	self.location.reload();
+}
+function set_size() {
+	document.SlideLayer.width = window.innerWidth;
+	document.SlideLayer.height = window.innerHeight;
+}
+document.captureEvents(Event.MOUSEDOWN);
+document.captureEvents(Event.KEYPRESS);
+document.onkeypress = _KPH ;
+document.onmousedown = _KPH ;
+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0031.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
+bgcolor="#000000">
+<script>
+
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+
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+	g_height = g_width * g_origHeight / g_origWidth;
+else
+	g_width = g_origWidth * g_height / g_origHeight;
+	
+g_top = (window.innerHeight - g_height) / 2;
+g_left = (window.innerWidth - g_width) / 2;
+
+document.write( '<layer id=SlideLayer BGCOLOR=#484848 background="" top=' + g_top + ' left=' + g_left + ' height=' + g_height + ' width=' + g_width + ' >' );
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+document.SlideLayer.clip.left = 0;
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+	if ( size < 1 ) size = 1;
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+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.png" height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.14 * g_height; mywidth = 0.99 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.96 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:nobullet;text-align:left;font-family:"Gill Sans";
+font-weight:normal;font-style:normal;text-decoration:none;text-shadow:none;
+text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;
+font-size:213%;mso-text-raise:0%;mso-line-spacing:"-220 0 -216";mso-margin-left-alt:
+348;mso-text-indent-alt:56;mso-line-spacing:"-220 0 -216";mso-margin-left-alt:
+348;mso-text-indent-alt:56'><span style='mso-special-format:nobullet;
+display:none;color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'><i>App</i></span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'> transcript and eight of
+its neighbors</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.09 * g_height; myleft = 0.02 * g_width; myheight = 0.9 * g_height; mywidth = 0.83 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.02 * g_width;
+yy = 0.09 * g_height;
+ht = 0.9 * g_height;
+wd = 0.83 * g_width;
+document.write(
+'<img border=0 src="slide0013_image027.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>A group of traits from
+   many different databases can be selected and brought together for joint
+   analysis. In this case all of the content of the BXD SELECTIONS is from a
+   single BRAIN database, the top 20 neighbors of the App transcript from the
+   Correlation Results table. Eight of these neighbors plus App is shown in the
+   slide.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Notes:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Arial size=3>1.</font><font
+   face=Helvetica size=3>All of items in the BXD SELECTIONS were selected using
+   the SELECT ALL button</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>2. The buttons at the
+   top (and bottom) of this page can do some cool stuff. We will work with
+   NETWORK GRAPH first.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>3. Think of the
+   SELECTIONS as your shopping cart. You go to different aisles in the
+   supermarket to acquire different types of items of interest. These could
+   include transcripts, classical phenotypes (longevity, brain weight, prepulse
+   inhibition, iron levels in midbrain). �Checking out� in this case involves
+   doing some analysis with the items in the cart.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>4. Different tools
+   handle different numbers of items. Most will handle up to 100 traits.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0032.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0032.htm
new file mode 100755
index 00000000..85ee47fe
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0032.htm
@@ -0,0 +1,118 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Aug-15-05: App transcript coexpression neighborhood">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
+		min = window.innerHeight/20;
+		
+	return min+"pt";
+}
+var SoundEnabled = navigator.plugins && navigator.plugins["LiveAudio"];
+function restore() {
+	self.location.reload();
+}
+function set_size() {
+	document.SlideLayer.width = window.innerWidth;
+	document.SlideLayer.height = window.innerHeight;
+}
+document.captureEvents(Event.MOUSEDOWN);
+document.captureEvents(Event.KEYPRESS);
+document.onkeypress = _KPH ;
+document.onmousedown = _KPH ;
+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0032.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
+bgcolor="#000000">
+<script>
+
+g_origHeight = 566;
+g_origWidth = 755;
+g_width = window.innerWidth - 10;
+g_height = window.innerHeight - 10;
+
+g_top = 0;
+g_left = 0;
+
+if ( g_width < ( g_origWidth * g_height /g_origHeight ) )
+	g_height = g_width * g_origHeight / g_origWidth;
+else
+	g_width = g_origWidth * g_height / g_origHeight;
+	
+g_top = (window.innerHeight - g_height) / 2;
+g_left = (window.innerWidth - g_width) / 2;
+
+document.write( '<layer id=SlideLayer BGCOLOR=#484848 background="" top=' + g_top + ' left=' + g_left + ' height=' + g_height + ' width=' + g_width + ' >' );
+document.SlideLayer.clip.top = 0;
+document.SlideLayer.clip.left = 0;
+document.SlideLayer.clip.height = g_height;
+document.SlideLayer.clip.width = g_width;
+function new_font_size() {
+	var size = 11 * g_width / g_origWidth;
+	if ( size < 1 ) size = 1;
+	return size+"pt";
+}
+</script>
+<div id=SlideObj class=sld style='position:relative;font-size:&{new_font_size()};'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 1 * g_height; mywidth = 1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.png" height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.82 * g_height; myleft = 0.04 * g_width; myheight = 0.18 * g_height; mywidth = 0.96 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div></div>
+</layer><script>
+	mytop = -0.02 * g_height; myleft = 0 * g_width; myheight = 0.12 * g_height; mywidth = 1.05 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.02 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 1.04 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%'><span style='font-size:82%'><i>App</i></span><span
+style='font-size:82%'> transcript coexpression neighborhood</span><span
+style='mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.37 * g_height; myleft = 0.01 * g_width; myheight = 0.62 * g_height; mywidth = 0.97 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.01 * g_width;
+yy = 0.37 * g_height;
+ht = 0.62 * g_height;
+wd = 0.97 * g_width;
+document.write(
+'<img border=0 src="slide0014_image029.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.11 * g_height; myleft = 0.01 * g_width; myheight = 0.25 * g_height; mywidth = 0.79 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.01 * g_width;
+yy = 0.11 * g_height;
+ht = 0.25 * g_height;
+wd = 0.79 * g_width;
+document.write(
+'<img border=0 src="slide0014_image031.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.1 * g_height; myleft = 0.81 * g_width; myheight = 0.09 * g_height; mywidth = 0.18 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.81 * g_width;
+yy = 0.1 * g_height;
+ht = 0.09 * g_height;
+wd = 0.18 * g_width;
+document.write(
+'<img border=0 src="slide0014_image033.png" x=' + xx + ' y=' +yy + ' height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Output of the Network
+   Graph. Warm colors (orange and red) are positive correlations above 0.5
+   whereas cool colors (green and blue) are negative correlations. Notes:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Arial size=3>1.</font><font
+   face=Helvetica size=3> All of the nodes (gene/transcripts) on this graph are
+   clickable.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>2. For this graph the
+   App expression values have �reverted� to their pre-Windsorized values.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>3. To generate this
+   graph, we used the default setting:<span style="mso-spacerun: yes">&nbsp;
+   </span>Size of 16 by 16 inches; Gene Symbols; Don't Show Correlations; Use
+   curved lines (aka �edges�).</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0033.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0033.htm
new file mode 100755
index 00000000..042ca4ad
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0033.htm
@@ -0,0 +1,104 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
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+<style media=print>
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+</style>
+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
+		min = window.innerHeight/20;
+		
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+var SoundEnabled = navigator.plugins && navigator.plugins["LiveAudio"];
+function restore() {
+	self.location.reload();
+}
+function set_size() {
+	document.SlideLayer.width = window.innerWidth;
+	document.SlideLayer.height = window.innerHeight;
+}
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+document.captureEvents(Event.KEYPRESS);
+document.onkeypress = _KPH ;
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+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0033.htm");
+}//-->
+</script>
+</head>
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+
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+</script>
+<div><script>
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+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:nobullet;text-align:left;font-family:"Gill Sans";
+font-weight:normal;font-style:normal;text-decoration:none;text-shadow:none;
+text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;
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+292;mso-text-indent-alt:0'><span style='mso-special-format:nobullet;display:
+none;color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>Correlations of </span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'><i>App</i></span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'> with classical traits</span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</layer></div>
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+//-->
+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Going back to the Trait
+   Data and Analysis Form window, we have computed the correlations between
+   strain variation in App expression level and other classical phenotypes that
+   have already been measured in many of the same BXD strains.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Notes:</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Arial size=3>1.</font><font
+   face=Helvetica size=3>The number of common strains varies widely--in this
+   case from 14 to 23 strains.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>2. We can add these
+   traits (four are selected) to our BXD SELECTIONS window.</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0034.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0034.htm
new file mode 100755
index 00000000..3cf1ac70
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0034.htm
@@ -0,0 +1,93 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
+		min = window.innerHeight/20;
+		
+	return min+"pt";
+}
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+function restore() {
+	self.location.reload();
+}
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+	document.SlideLayer.width = window.innerWidth;
+	document.SlideLayer.height = window.innerHeight;
+}
+document.captureEvents(Event.MOUSEDOWN);
+document.captureEvents(Event.KEYPRESS);
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+ LoadNavSld("slide0034.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
+bgcolor="#000000">
+<script>
+
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+g_left = (window.innerWidth - g_width) / 2;
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+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
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+</layer><script>
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+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.98 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:nobullet;text-align:left;font-family:"Gill Sans";
+font-weight:normal;font-style:normal;text-decoration:none;text-shadow:none;
+text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;
+font-size:213%;mso-text-raise:0%;mso-line-spacing:"-220 0 -216";mso-margin-left-alt:
+292;mso-text-indent-alt:0;mso-line-spacing:"-220 0 -216";mso-margin-left-alt:
+292;mso-text-indent-alt:0'><span style='mso-special-format:nobullet;display:
+none;color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>Network Graph of </span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'><i>App</i></span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'> with classical traits</span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.08 * g_height; myleft = 0.03 * g_width; myheight = 0.9 * g_height; mywidth = 0.88 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+xx = 0.03 * g_width;
+yy = 0.08 * g_height;
+ht = 0.9 * g_height;
+wd = 0.88 * g_width;
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+//-->
+</script></div>
+</layer></div>
+</LAYER>
+
+<layer>
+ <div id=NotesObj style='display:none'>
+ <table style='color:white' border=0 width="100%">
+  <tr>
+   <td width=5 nowrap></td>
+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>We have computed the
+   Network Graph, now using other types of traits.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Saline Hot Plate
+   Latency is the green node labeled 10020.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Freezing (fear) is the
+   green node labeled 10447.</font><br>
+   </td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Helvetica size=3>Notes:</font><br>
+   </td>
+  </tr>
+ </table>
+ </div>
+</layer>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0035.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0035.htm
new file mode 100755
index 00000000..ca5ac8bb
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0035.htm
@@ -0,0 +1,151 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
+		min = window.innerHeight/20;
+		
+	return min+"pt";
+}
+var SoundEnabled = navigator.plugins && navigator.plugins["LiveAudio"];
+function restore() {
+	self.location.reload();
+}
+function set_size() {
+	document.SlideLayer.width = window.innerWidth;
+	document.SlideLayer.height = window.innerHeight;
+}
+document.captureEvents(Event.MOUSEDOWN);
+document.captureEvents(Event.KEYPRESS);
+document.onkeypress = _KPH ;
+document.onmousedown = _KPH ;
+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0035.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
+bgcolor="#000000">
+<script>
+
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+
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+
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+	g_height = g_width * g_origHeight / g_origWidth;
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+	
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+g_left = (window.innerWidth - g_width) / 2;
+
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+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.png" height=' + ht + ' width=' + wd + '>' );
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+</script></div>
+</layer><script>
+	mytop = 0.01 * g_height; myleft = 0.03 * g_width; myheight = 0.14 * g_height; mywidth = 0.93 * g_width;
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+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.07 * g_height; mywidth = 0.91 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:nobullet;text-align:left;font-family:"Gill Sans";
+font-weight:normal;font-style:normal;text-decoration:none;text-shadow:none;
+text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;color:#FBFDB8;
+font-size:213%;mso-text-raise:0%;mso-line-spacing:"-220 0 -216";mso-margin-left-alt:
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+292;mso-text-indent-alt:0'><span style='mso-special-format:nobullet;display:
+none;color:#FBFDB8;font-family:"Monotype Sorts";font-size:99%'>l</span><span
+style='font-size:106%;color:#E9EB5D;mso-color-index:3'>Summary of Part 1:</span><span
+style='font-size:94%;color:#E9EB5D;mso-color-index:3;mso-special-format:lastCR;
+display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
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+</script>
+<div>
+<layer>
+ <div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
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+ mso-text-raise:0%'></div>
+</layer>
+<layer>
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+</layer>
+<layer>
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+</layer>
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+</script>
+<div style='mso-special-format:numbullet;font-family:Arial;text-align:left;
+font-family:Verdana;font-weight:normal;font-style:normal;text-decoration:none;
+text-shadow:none;text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;
+color:black;mso-color-index:1;font-size:80%;mso-text-raise:0%;mso-margin-left-alt:
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+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:numbullet;
+position:absolute;left:-2.84%;font-family:Arial'>1.</span></span><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>You have learned the basics
+about searching for traits<br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.85 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:numbullet;font-family:Arial;text-align:left;
+font-family:Verdana;font-weight:normal;font-style:normal;text-decoration:none;
+text-shadow:none;text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;
+color:black;mso-color-index:1;font-size:80%;mso-text-raise:0%;mso-margin-left-alt:
+144;mso-margin-left-alt:144'><script>
+	mytop = 0 * g_height; myleft = 0.02 * g_width; myheight = 0.05 * g_height; mywidth = 0.83 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:numbullet;
+position:absolute;left:-3.03%;font-family:Arial'>2.</span></span><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>You know some methods to check
+data quality<br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.1 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.85 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:numbullet;font-family:Arial;text-align:left;
+font-family:Verdana;font-weight:normal;font-style:normal;text-decoration:none;
+text-shadow:none;text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;
+color:black;mso-color-index:1;font-size:80%;mso-text-raise:0%;mso-margin-left-alt:
+144;mso-margin-left-alt:144'><script>
+	mytop = 0 * g_height; myleft = 0.02 * g_width; myheight = 0.05 * g_height; mywidth = 0.83 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:numbullet;
+position:absolute;left:-3.03%;font-family:Arial'>3.</span></span><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>You know how to edit bad or
+suspicious data<br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.16 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.9 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:numbullet;font-family:Arial;text-align:left;
+font-family:Verdana;font-weight:normal;font-style:normal;text-decoration:none;
+text-shadow:none;text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;
+color:black;mso-color-index:1;font-size:80%;mso-text-raise:0%;mso-margin-left-alt:
+144;mso-margin-left-alt:144'><script>
+	mytop = 0 * g_height; myleft = 0.02 * g_width; myheight = 0.05 * g_height; mywidth = 0.88 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:numbullet;
+position:absolute;left:-2.85%;font-family:Arial'>4.</span></span><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>You know how to review the
+basic statistics of a trait<br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.21 * g_height; myleft = 0 * g_width; myheight = 0.1 * g_height; mywidth = 0.94 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:numbullet;font-family:Arial;text-align:left;
+font-family:Verdana;font-weight:normal;font-style:normal;text-decoration:none;
+text-shadow:none;text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;
+color:black;mso-color-index:1;font-size:80%;mso-text-raise:0%;mso-margin-left-alt:
+144;mso-margin-left-alt:144'><script>
+	mytop = 0 * g_height; myleft = 0.02 * g_width; myheight = 0.05 * g_height; mywidth = 0.91 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:numbullet;
+position:absolute;left:-2.74%;font-family:Arial'>5.</span></span><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>You know how to generate a
+scattergram between two </span></span></layer><script>
+	mytop = 0.05 * g_height; myleft = 0.02 * g_width; myheight = 0.05 * g_height; mywidth = 0.83 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'>traits using the Traits Correlation tool<br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.31 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:numbullet;font-family:Arial;text-align:left;
+font-family:Verdana;font-weight:normal;font-style:normal;text-decoration:none;
+text-shadow:none;text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;
+color:black;mso-color-index:1;font-size:80%;mso-text-raise:0%;mso-margin-left-alt:
+144;mso-margin-left-alt:144'><script>
+	mytop = 0 * g_height; myleft = 0.02 * g_width; myheight = 0.05 * g_height; mywidth = 0.98 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:numbullet;
+position:absolute;left:-2.56%;font-family:Arial'>6.</span></span><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>You know how to add items to
+your SELECTIONS window<br>
+</span></span></layer></div>
+</layer><script>
+	mytop = 0.37 * g_height; myleft = 0 * g_width; myheight = 0.1 * g_height; mywidth = 1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='mso-special-format:numbullet;font-family:Arial;text-align:left;
+font-family:Verdana;font-weight:normal;font-style:normal;text-decoration:none;
+text-shadow:none;text-effect:none;mso-fareast-hint:no;layout-flow:horizontal;
+color:black;mso-color-index:1;font-size:80%;mso-text-raise:0%;mso-margin-left-alt:
+144;mso-margin-left-alt:144'><script>
+	mytop = 0 * g_height; myleft = 0.02 * g_width; myheight = 0.05 * g_height; mywidth = 0.97 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'><span style='mso-special-format:numbullet;
+position:absolute;left:-2.57%;font-family:Arial'>7.</span></span><span
+style='font-family:"Gill Sans";font-size:200%;color:#E9EB5D;mso-color-index:
+3'><span style="mso-spacerun: yes">&nbsp;</span>You know how to generate a
+Network Graph of traits that </span></span></layer><script>
+	mytop = 0.05 * g_height; myleft = 0.02 * g_width; myheight = 0.05 * g_height; mywidth = 0.83 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'>co-vary. </span></span></layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.67 * g_height; myleft = 0.05 * g_width; myheight = 0.26 * g_height; mywidth = 1.05 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 1.05 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'>What does genetic covariance mean? The genetic
+covariance can </span></span></layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 1.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'>be functional and mechanistic, but it can also
+be due to linkage </span></span></layer><script>
+	mytop = 0.1 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 1.01 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'>disequilibrium. Finally, it can be due to
+sampling error or poor </span></span></layer><script>
+	mytop = 0.16 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.92 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'>experimental design. Evaluate the biological
+plausibility of </span></span></layer><script>
+	mytop = 0.21 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.89 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D;mso-color-index:3'>correlations. Test and be skeptical.</span></span></layer></div>
+</layer></div>
+</LAYER>
+<script language=JavaScript><!--
+//-->
+</script><script language=JavaScript><!--
+function playList() {
+
+}
+//-->
+</script>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0036.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0036.htm
new file mode 100755
index 00000000..ccec2e7d
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0036.htm
@@ -0,0 +1,112 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Aug-15-05: Contact for comments and improvements:">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:76% !important;}
+-->
+</style>
+<script language=Javascript src=script.js></script>
+<script language=JavaScript>
+function font_size() {
+	var min = window.innerWidth/20;
+	if ( min > window.innerHeight/20 )
+		min = window.innerHeight/20;
+		
+	return min+"pt";
+}
+var SoundEnabled = navigator.plugins && navigator.plugins["LiveAudio"];
+function restore() {
+	self.location.reload();
+}
+function set_size() {
+	document.SlideLayer.width = window.innerWidth;
+	document.SlideLayer.height = window.innerHeight;
+}
+document.captureEvents(Event.MOUSEDOWN);
+document.captureEvents(Event.KEYPRESS);
+document.onkeypress = _KPH ;
+document.onmousedown = _KPH ;
+ parent.base.highlite(); 
+</script><script language=JavaScript><!--
+function DoOnLoad() { 
+ LoadNavSld("slide0036.htm");
+}//-->
+</script>
+</head>
+<body onresize="restore()" onload="DoOnLoad()" style='font-size:&{font_size()};'
+bgcolor="#000000">
+<script>
+
+g_origHeight = 566;
+g_origWidth = 755;
+g_width = window.innerWidth - 10;
+g_height = window.innerHeight - 10;
+
+g_top = 0;
+g_left = 0;
+
+if ( g_width < ( g_origWidth * g_height /g_origHeight ) )
+	g_height = g_width * g_origHeight / g_origWidth;
+else
+	g_width = g_origWidth * g_height / g_origHeight;
+	
+g_top = (window.innerHeight - g_height) / 2;
+g_left = (window.innerWidth - g_width) / 2;
+
+document.write( '<layer id=SlideLayer BGCOLOR=#484848 background="" top=' + g_top + ' left=' + g_left + ' height=' + g_height + ' width=' + g_width + ' >' );
+document.SlideLayer.clip.top = 0;
+document.SlideLayer.clip.left = 0;
+document.SlideLayer.clip.height = g_height;
+document.SlideLayer.clip.width = g_width;
+function new_font_size() {
+	var size = 11 * g_width / g_origWidth;
+	if ( size < 1 ) size = 1;
+	return size+"pt";
+}
+</script>
+<div id=SlideObj class=sld style='position:relative;font-size:&{new_font_size()};'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 1 * g_height; mywidth = 1 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script language=JavaScript><!--
+ht =   g_height;
+wd =   g_width;
+document.write(
+'<img src="master03_background.png" height=' + ht + ' width=' + wd + '>' );
+//-->
+</script></div>
+</layer><script>
+	mytop = 0.02 * g_height; myleft = 0.02 * g_width; myheight = 0.09 * g_height; mywidth = 0.94 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0.01 * g_height; myleft = 0.01 * g_width; myheight = 0.06 * g_height; mywidth = 0.92 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:"-358 0 -1";mso-line-spacing:"-358 0 -1"'><span
+style='font-size:73%'><i>Contact for comments and improvements:</i></span><span
+style='font-size:82%;mso-special-format:lastCR;display:none'><br>
+</span></div>
+</layer></div>
+</layer><script>
+	mytop = 0.16 * g_height; myleft = 0.06 * g_width; myheight = 0.24 * g_height; mywidth = 0.9 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div><script>
+	mytop = 0 * g_height; myleft = 0.01 * g_width; myheight = 0.24 * g_height; mywidth = 0.87 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:"Gill Sans";font-weight:normal;
+font-style:normal;text-decoration:none;text-shadow:none;text-effect:none;
+mso-fareast-hint:no;layout-flow:horizontal;color:#E9EB5D;font-size:293%;
+mso-text-raise:0%;mso-line-spacing:"-358 0 -1";mso-line-spacing:"-358 0 -1"'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.07 * g_height; mywidth = 0.87 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:82%'>rwilliam@nb.utmem.edu<br>
+</span></span></layer><script>
+	mytop = 0.08 * g_height; myleft = 0.04 * g_width; myheight = 0.07 * g_height; mywidth = 0.83 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:82%'><br>
+</span></span></layer><script>
+	mytop = 0.16 * g_height; myleft = 0.04 * g_width; myheight = 0.07 * g_height; mywidth = 0.83 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-size:82%;mso-special-format:lastCR;
+display:none'><br>
+</span></span></layer></div>
+</layer></div>
+</layer><script>
+	mytop = 0.27 * g_height; myleft = 0.09 * g_width; myheight = 0.07 * g_height; mywidth = 0.5 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><span style='font-family:"Gill Sans";font-size:300%;
+color:#E9EB5D'>kmanly@utmem.edu</span></div>
+</layer><script>
+	mytop = 0.83 * g_height; myleft = 0.04 * g_width; myheight = 0.15 * g_height; mywidth = 1.08 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script>
+<div style='text-align:left;font-family:Verdana;font-weight:normal;font-style:
+normal;text-decoration:none;text-shadow:none;text-effect:none;mso-fareast-hint:
+no;layout-flow:horizontal;color:black;mso-color-index:1;font-size:80%;
+mso-text-raise:0%'><script>
+	mytop = 0 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.98 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D'>The </span><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D'><i>App</i></span><span style='font-family:"Gill Sans";
+font-size:200%;color:#E9EB5D'> findings reviewed in this presentation are part
+of an </span></span></layer><script>
+	mytop = 0.05 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 1.08 * g_width;
+	document.write( '<layer top=' + mytop + ' left=' + myleft + ' height=' + myheight + ' width=' + mywidth + ' >' );
+</script><span
+style='text-align:left'><span style='font-family:"Gill Sans";font-size:200%;
+color:#E9EB5D'>ongoing study by R. Williams. R. Homayouni, and R. Clark (July
+15, </span></span></layer><script>
+	mytop = 0.1 * g_height; myleft = 0 * g_width; myheight = 0.05 * g_height; mywidth = 0.91 * g_width;
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+   <td width="100%"></td>
+  </tr>
+  <tr>
+   <td colspan=1></td>
+   <td align=left colspan=1><font face=Verdana size=3>END</font><br>
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+<script language=JavaScript><!--
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+function playList() {
+
+}
+//-->
+</script>
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+\ No newline at end of file
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+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
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+href="webqtl_demo2_part1.ppt.ppt">
+<script>
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+}
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+function flatLoad() {
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+	parent.base.highlite();
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+ }//-->
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diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0038.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0038.htm
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--- /dev/null
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+<html>
+<head>
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+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
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+<link title="Presentation File" type="application/powerpoint" rel=alternate
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+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
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+<!--.sld
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+<script language=JavaScript src=script.js></script><script language=JavaScript>
+	if ( parent.base.msie < 0 ) {
+	  	document.captureEvents(Event.MOUSEDOWN);
+  		document.captureEvents(Event.KEYPRESS);
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+  		document.onmousedown = _KPH;
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+function restore() {
+	if ( parent.base.msie < 0 ) 
+		self.location.reload();
+}
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+<script language=JavaScript>
+function flatLoad() {
+if ( !parent.IsFullScrMode() )
+	parent.base.highlite();
+DoOnLoad();
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+      if ( parent.IsFullScrMode() && parent.NavPopup && !parent.NavPopup.closed )
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diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0039.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0039.htm
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--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0039.htm
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+<html>
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+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
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+<link title="Presentation File" type="application/powerpoint" rel=alternate
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+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
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+<meta name=Description content=Aug-15-05>
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
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+<script language=JavaScript src=script.js></script><script language=JavaScript>
+	if ( parent.base.msie < 0 ) {
+	  	document.captureEvents(Event.MOUSEDOWN);
+  		document.captureEvents(Event.KEYPRESS);
+  		document.onkeypress = _KPH;
+  		document.onmousedown = _KPH;
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+  		
+function restore() {
+	if ( parent.base.msie < 0 ) 
+		self.location.reload();
+}
+</script>
+<script language=JavaScript>
+function flatLoad() {
+if ( !parent.IsFullScrMode() )
+	parent.base.highlite();
+DoOnLoad();
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+      if ( parent.IsFullScrMode() && parent.NavPopup && !parent.NavPopup.closed )
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+  	parent.base.SldUpdated( "slide0039.htm" );
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+<body bgcolor="#000000" onresize="restore()" onload="flatLoad()"
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--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0040.htm
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+<html>
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+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
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+<link title="Presentation File" type="application/powerpoint" rel=alternate
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+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
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+<script language=JavaScript src=script.js></script><script language=JavaScript>
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+	  	document.captureEvents(Event.MOUSEDOWN);
+  		document.captureEvents(Event.KEYPRESS);
+  		document.onkeypress = _KPH;
+  		document.onmousedown = _KPH;
+  	}
+  		
+function restore() {
+	if ( parent.base.msie < 0 ) 
+		self.location.reload();
+}
+</script>
+<script language=JavaScript>
+function flatLoad() {
+if ( !parent.IsFullScrMode() )
+	parent.base.highlite();
+DoOnLoad();
+  	
+      
+      if ( parent.IsFullScrMode() && parent.NavPopup && !parent.NavPopup.closed )
+      		parent.NavPopup.focus();
+      	else	
+  		self.focus();
+  	parent.base.SldUpdated( "slide0040.htm" );
+ } 	
+ </script><script language=JavaScript><!--
+function DoOnLoad() { 
+ }//-->
+</script>
+</head>
+<body bgcolor="#000000" onresize="restore()" onload="flatLoad()"
+onclick="DocumentOnClick(event)" onkeypress="_KPH(event)">
+<center><img src=Slide0004.gif border=0 usemap="#Slide0004.gif_map"></center>
+</body>
+</html>
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diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0041.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0041.htm
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+<html>
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+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
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+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:80% !important;}
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+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript>
+	if ( parent.base.msie < 0 ) {
+	  	document.captureEvents(Event.MOUSEDOWN);
+  		document.captureEvents(Event.KEYPRESS);
+  		document.onkeypress = _KPH;
+  		document.onmousedown = _KPH;
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+  		
+function restore() {
+	if ( parent.base.msie < 0 ) 
+		self.location.reload();
+}
+</script>
+<script language=JavaScript>
+function flatLoad() {
+if ( !parent.IsFullScrMode() )
+	parent.base.highlite();
+DoOnLoad();
+  	
+      
+      if ( parent.IsFullScrMode() && parent.NavPopup && !parent.NavPopup.closed )
+      		parent.NavPopup.focus();
+      	else	
+  		self.focus();
+  	parent.base.SldUpdated( "slide0041.htm" );
+ } 	
+ </script><script language=JavaScript><!--
+function DoOnLoad() { 
+ }//-->
+</script>
+</head>
+<body bgcolor="#000000" onresize="restore()" onload="flatLoad()"
+onclick="DocumentOnClick(event)" onkeypress="_KPH(event)">
+<center><img src=Slide0005.gif border=0 usemap="#Slide0005.gif_map"></center>
+</body>
+</html>
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diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0042.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0042.htm
new file mode 100755
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--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0042.htm
@@ -0,0 +1,34 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
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+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:80% !important;}
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+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript>
+	if ( parent.base.msie < 0 ) {
+	  	document.captureEvents(Event.MOUSEDOWN);
+  		document.captureEvents(Event.KEYPRESS);
+  		document.onkeypress = _KPH;
+  		document.onmousedown = _KPH;
+  	}
+  		
+function restore() {
+	if ( parent.base.msie < 0 ) 
+		self.location.reload();
+}
+</script>
+<script language=JavaScript>
+function flatLoad() {
+if ( !parent.IsFullScrMode() )
+	parent.base.highlite();
+DoOnLoad();
+  	
+      
+      if ( parent.IsFullScrMode() && parent.NavPopup && !parent.NavPopup.closed )
+      		parent.NavPopup.focus();
+      	else	
+  		self.focus();
+  	parent.base.SldUpdated( "slide0042.htm" );
+ } 	
+ </script><script language=JavaScript><!--
+function DoOnLoad() { 
+ }//-->
+</script>
+</head>
+<body bgcolor="#000000" onresize="restore()" onload="flatLoad()"
+onclick="DocumentOnClick(event)" onkeypress="_KPH(event)">
+<center><img src=Slide0006.gif border=0 usemap="#Slide0006.gif_map"></center>
+</body>
+</html>
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diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0043.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0043.htm
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--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0043.htm
@@ -0,0 +1,34 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
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+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:80% !important;}
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+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript>
+	if ( parent.base.msie < 0 ) {
+	  	document.captureEvents(Event.MOUSEDOWN);
+  		document.captureEvents(Event.KEYPRESS);
+  		document.onkeypress = _KPH;
+  		document.onmousedown = _KPH;
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+  		
+function restore() {
+	if ( parent.base.msie < 0 ) 
+		self.location.reload();
+}
+</script>
+<script language=JavaScript>
+function flatLoad() {
+if ( !parent.IsFullScrMode() )
+	parent.base.highlite();
+DoOnLoad();
+  	
+      
+      if ( parent.IsFullScrMode() && parent.NavPopup && !parent.NavPopup.closed )
+      		parent.NavPopup.focus();
+      	else	
+  		self.focus();
+  	parent.base.SldUpdated( "slide0043.htm" );
+ } 	
+ </script><script language=JavaScript><!--
+function DoOnLoad() { 
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+</head>
+<body bgcolor="#000000" onresize="restore()" onload="flatLoad()"
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diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0044.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0044.htm
new file mode 100755
index 00000000..6c7be85e
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0044.htm
@@ -0,0 +1,34 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
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+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:80% !important;}
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+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript>
+	if ( parent.base.msie < 0 ) {
+	  	document.captureEvents(Event.MOUSEDOWN);
+  		document.captureEvents(Event.KEYPRESS);
+  		document.onkeypress = _KPH;
+  		document.onmousedown = _KPH;
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+  		
+function restore() {
+	if ( parent.base.msie < 0 ) 
+		self.location.reload();
+}
+</script>
+<script language=JavaScript>
+function flatLoad() {
+if ( !parent.IsFullScrMode() )
+	parent.base.highlite();
+DoOnLoad();
+  	
+      
+      if ( parent.IsFullScrMode() && parent.NavPopup && !parent.NavPopup.closed )
+      		parent.NavPopup.focus();
+      	else	
+  		self.focus();
+  	parent.base.SldUpdated( "slide0044.htm" );
+ } 	
+ </script><script language=JavaScript><!--
+function DoOnLoad() { 
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+</script>
+</head>
+<body bgcolor="#000000" onresize="restore()" onload="flatLoad()"
+onclick="DocumentOnClick(event)" onkeypress="_KPH(event)">
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diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0045.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0045.htm
new file mode 100755
index 00000000..19a153ed
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0045.htm
@@ -0,0 +1,34 @@
+<html>
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+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
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+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<style media=print>
+<!--.sld
+	{left:0px !important;
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+	height:4.5in !important;
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+<script language=JavaScript src=script.js></script><script language=JavaScript>
+	if ( parent.base.msie < 0 ) {
+	  	document.captureEvents(Event.MOUSEDOWN);
+  		document.captureEvents(Event.KEYPRESS);
+  		document.onkeypress = _KPH;
+  		document.onmousedown = _KPH;
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+  		
+function restore() {
+	if ( parent.base.msie < 0 ) 
+		self.location.reload();
+}
+</script>
+<script language=JavaScript>
+function flatLoad() {
+if ( !parent.IsFullScrMode() )
+	parent.base.highlite();
+DoOnLoad();
+  	
+      
+      if ( parent.IsFullScrMode() && parent.NavPopup && !parent.NavPopup.closed )
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+  		self.focus();
+  	parent.base.SldUpdated( "slide0045.htm" );
+ } 	
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+function DoOnLoad() { 
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+</head>
+<body bgcolor="#000000" onresize="restore()" onload="flatLoad()"
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diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0046.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0046.htm
new file mode 100755
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+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
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+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
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+<style media=print>
+<!--.sld
+	{left:0px !important;
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+}
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+function flatLoad() {
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+	parent.base.highlite();
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diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0048.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0048.htm
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--- /dev/null
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+<html>
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+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
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+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
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+<meta name=Description content=Aug-15-05>
+<style media=print>
+<!--.sld
+	{left:0px !important;
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+  		document.onmousedown = _KPH;
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+function restore() {
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+		self.location.reload();
+}
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+<script language=JavaScript>
+function flatLoad() {
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+	parent.base.highlite();
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+      if ( parent.IsFullScrMode() && parent.NavPopup && !parent.NavPopup.closed )
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diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0049.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0049.htm
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--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0049.htm
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+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
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+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:80% !important;}
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+<script language=JavaScript src=script.js></script><script language=JavaScript>
+	if ( parent.base.msie < 0 ) {
+	  	document.captureEvents(Event.MOUSEDOWN);
+  		document.captureEvents(Event.KEYPRESS);
+  		document.onkeypress = _KPH;
+  		document.onmousedown = _KPH;
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+function restore() {
+	if ( parent.base.msie < 0 ) 
+		self.location.reload();
+}
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+<script language=JavaScript>
+function flatLoad() {
+if ( !parent.IsFullScrMode() )
+	parent.base.highlite();
+DoOnLoad();
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+      
+      if ( parent.IsFullScrMode() && parent.NavPopup && !parent.NavPopup.closed )
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+  	parent.base.SldUpdated( "slide0049.htm" );
+ } 	
+ </script><script language=JavaScript><!--
+function DoOnLoad() { 
+ }//-->
+</script>
+</head>
+<body bgcolor="#000000" onresize="restore()" onload="flatLoad()"
+onclick="DocumentOnClick(event)" onkeypress="_KPH(event)">
+<center><img src=Slide0013.gif border=0 usemap="#Slide0013.gif_map"></center>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0050.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0050.htm
new file mode 100755
index 00000000..05c91170
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0050.htm
@@ -0,0 +1,34 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
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+<meta name=Description
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+<!--.sld
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+<script language=JavaScript src=script.js></script><script language=JavaScript>
+	if ( parent.base.msie < 0 ) {
+	  	document.captureEvents(Event.MOUSEDOWN);
+  		document.captureEvents(Event.KEYPRESS);
+  		document.onkeypress = _KPH;
+  		document.onmousedown = _KPH;
+  	}
+  		
+function restore() {
+	if ( parent.base.msie < 0 ) 
+		self.location.reload();
+}
+</script>
+<script language=JavaScript>
+function flatLoad() {
+if ( !parent.IsFullScrMode() )
+	parent.base.highlite();
+DoOnLoad();
+  	
+      
+      if ( parent.IsFullScrMode() && parent.NavPopup && !parent.NavPopup.closed )
+      		parent.NavPopup.focus();
+      	else	
+  		self.focus();
+  	parent.base.SldUpdated( "slide0050.htm" );
+ } 	
+ </script><script language=JavaScript><!--
+function DoOnLoad() { 
+ }//-->
+</script>
+</head>
+<body bgcolor="#000000" onresize="restore()" onload="flatLoad()"
+onclick="DocumentOnClick(event)" onkeypress="_KPH(event)">
+<center><img src=Slide0014.gif border=0 usemap="#Slide0014.gif_map"></center>
+</body>
+</html>
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diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0051.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0051.htm
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--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0051.htm
@@ -0,0 +1,34 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:80% !important;}
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+<script language=JavaScript src=script.js></script><script language=JavaScript>
+	if ( parent.base.msie < 0 ) {
+	  	document.captureEvents(Event.MOUSEDOWN);
+  		document.captureEvents(Event.KEYPRESS);
+  		document.onkeypress = _KPH;
+  		document.onmousedown = _KPH;
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+  		
+function restore() {
+	if ( parent.base.msie < 0 ) 
+		self.location.reload();
+}
+</script>
+<script language=JavaScript>
+function flatLoad() {
+if ( !parent.IsFullScrMode() )
+	parent.base.highlite();
+DoOnLoad();
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+      
+      if ( parent.IsFullScrMode() && parent.NavPopup && !parent.NavPopup.closed )
+      		parent.NavPopup.focus();
+      	else	
+  		self.focus();
+  	parent.base.SldUpdated( "slide0051.htm" );
+ } 	
+ </script><script language=JavaScript><!--
+function DoOnLoad() { 
+ }//-->
+</script>
+</head>
+<body bgcolor="#000000" onresize="restore()" onload="flatLoad()"
+onclick="DocumentOnClick(event)" onkeypress="_KPH(event)">
+<center><img src=Slide0015.gif border=0 usemap="#Slide0015.gif_map"></center>
+</body>
+</html>
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diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0052.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0052.htm
new file mode 100755
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--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0052.htm
@@ -0,0 +1,34 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:80% !important;}
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+<script language=JavaScript src=script.js></script><script language=JavaScript>
+	if ( parent.base.msie < 0 ) {
+	  	document.captureEvents(Event.MOUSEDOWN);
+  		document.captureEvents(Event.KEYPRESS);
+  		document.onkeypress = _KPH;
+  		document.onmousedown = _KPH;
+  	}
+  		
+function restore() {
+	if ( parent.base.msie < 0 ) 
+		self.location.reload();
+}
+</script>
+<script language=JavaScript>
+function flatLoad() {
+if ( !parent.IsFullScrMode() )
+	parent.base.highlite();
+DoOnLoad();
+  	
+      
+      if ( parent.IsFullScrMode() && parent.NavPopup && !parent.NavPopup.closed )
+      		parent.NavPopup.focus();
+      	else	
+  		self.focus();
+  	parent.base.SldUpdated( "slide0052.htm" );
+ } 	
+ </script><script language=JavaScript><!--
+function DoOnLoad() { 
+ }//-->
+</script>
+</head>
+<body bgcolor="#000000" onresize="restore()" onload="flatLoad()"
+onclick="DocumentOnClick(event)" onkeypress="_KPH(event)">
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diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0053.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0053.htm
new file mode 100755
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--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0053.htm
@@ -0,0 +1,34 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
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+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description content=Aug-15-05>
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:80% !important;}
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+<script language=JavaScript src=script.js></script><script language=JavaScript>
+	if ( parent.base.msie < 0 ) {
+	  	document.captureEvents(Event.MOUSEDOWN);
+  		document.captureEvents(Event.KEYPRESS);
+  		document.onkeypress = _KPH;
+  		document.onmousedown = _KPH;
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+  		
+function restore() {
+	if ( parent.base.msie < 0 ) 
+		self.location.reload();
+}
+</script>
+<script language=JavaScript>
+function flatLoad() {
+if ( !parent.IsFullScrMode() )
+	parent.base.highlite();
+DoOnLoad();
+  	
+      
+      if ( parent.IsFullScrMode() && parent.NavPopup && !parent.NavPopup.closed )
+      		parent.NavPopup.focus();
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+  		self.focus();
+  	parent.base.SldUpdated( "slide0053.htm" );
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+</head>
+<body bgcolor="#000000" onresize="restore()" onload="flatLoad()"
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diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0054.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0054.htm
new file mode 100755
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--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0054.htm
@@ -0,0 +1,34 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
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+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
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+}
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+<style media=print>
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+<script language=JavaScript src=script.js></script><script language=JavaScript>
+	if ( parent.base.msie < 0 ) {
+	  	document.captureEvents(Event.MOUSEDOWN);
+  		document.captureEvents(Event.KEYPRESS);
+  		document.onkeypress = _KPH;
+  		document.onmousedown = _KPH;
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+  		
+function restore() {
+	if ( parent.base.msie < 0 ) 
+		self.location.reload();
+}
+</script>
+<script language=JavaScript>
+function flatLoad() {
+if ( !parent.IsFullScrMode() )
+	parent.base.highlite();
+DoOnLoad();
+  	
+      
+      if ( parent.IsFullScrMode() && parent.NavPopup && !parent.NavPopup.closed )
+      		parent.NavPopup.focus();
+      	else	
+  		self.focus();
+  	parent.base.SldUpdated( "slide0054.htm" );
+ } 	
+ </script><script language=JavaScript><!--
+function DoOnLoad() { 
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+</head>
+<body bgcolor="#000000" onresize="restore()" onload="flatLoad()"
+onclick="DocumentOnClick(event)" onkeypress="_KPH(event)">
+<center><img src=Slide0018.gif border=0 usemap="#Slide0018.gif_map"></center>
+</body>
+</html>
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diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0055.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0055.htm
new file mode 100755
index 00000000..d686e41f
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0055.htm
@@ -0,0 +1,34 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
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+<meta name=Description content=Jul-18-05>
+<style media=print>
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+<script language=JavaScript src=script.js></script><script language=JavaScript>
+	if ( parent.base.msie < 0 ) {
+	  	document.captureEvents(Event.MOUSEDOWN);
+  		document.captureEvents(Event.KEYPRESS);
+  		document.onkeypress = _KPH;
+  		document.onmousedown = _KPH;
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+function restore() {
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+		self.location.reload();
+}
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+<script language=JavaScript>
+function flatLoad() {
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+	parent.base.highlite();
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+      if ( parent.IsFullScrMode() && parent.NavPopup && !parent.NavPopup.closed )
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+  	parent.base.SldUpdated( "slide0055.htm" );
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+<body bgcolor="#000000" onresize="restore()" onload="flatLoad()"
+onclick="DocumentOnClick(event)" onkeypress="_KPH(event)">
+<center><img src=Slide0017.gif border=0 usemap="#Slide0017.gif_map"></center>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0056.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0056.htm
new file mode 100755
index 00000000..ee67068a
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0056.htm
@@ -0,0 +1,34 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Jul-18-05: The GeneNetwork and WebQTL : PART 2    link to www.genenetwork.org">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:80% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript>
+	if ( parent.base.msie < 0 ) {
+	  	document.captureEvents(Event.MOUSEDOWN);
+  		document.captureEvents(Event.KEYPRESS);
+  		document.onkeypress = _KPH;
+  		document.onmousedown = _KPH;
+  	}
+  		
+function restore() {
+	if ( parent.base.msie < 0 ) 
+		self.location.reload();
+}
+</script>
+<script language=JavaScript>
+function flatLoad() {
+if ( !parent.IsFullScrMode() )
+	parent.base.highlite();
+DoOnLoad();
+  	
+      
+      if ( parent.IsFullScrMode() && parent.NavPopup && !parent.NavPopup.closed )
+      		parent.NavPopup.focus();
+      	else	
+  		self.focus();
+  	parent.base.SldUpdated( "slide0056.htm" );
+ } 	
+ </script><script language=JavaScript><!--
+function DoOnLoad() { 
+ }//-->
+</script>
+</head>
+<body bgcolor="#000000" onresize="restore()" onload="flatLoad()"
+onclick="DocumentOnClick(event)" onkeypress="_KPH(event)">
+<center><img src=Slide0018.gif border=0 usemap="#Slide0018.gif_map"></center>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0057.htm b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0057.htm
new file mode 100755
index 00000000..6ae842ef
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/slide0057.htm
@@ -0,0 +1,34 @@
+<html>
+<head>
+<meta name=ProgId content=PowerPoint.Slide>
+<meta name=Generator content="Microsoft Macintosh PowerPoint 11">
+<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
+genomics</title>
+<link title="Presentation File" type="application/powerpoint" rel=alternate
+href="webqtl_demo2_part1.ppt.ppt">
+<script>
+if ( ! top.PPTPRESENTATION ) {
+	window.location.replace( "endshow.htm" );
+}
+</script>
+<meta name=Description
+content="Jul-18-05: Contact for comments and improvements:">
+<style media=print>
+<!--.sld
+	{left:0px !important;
+	width:6.0in !important;
+	height:4.5in !important;
+	font-size:80% !important;}
+-->
+</style>
+<script language=JavaScript src=script.js></script><script language=JavaScript>
+	if ( parent.base.msie < 0 ) {
+	  	document.captureEvents(Event.MOUSEDOWN);
+  		document.captureEvents(Event.KEYPRESS);
+  		document.onkeypress = _KPH;
+  		document.onmousedown = _KPH;
+  	}
+  		
+function restore() {
+	if ( parent.base.msie < 0 ) 
+		self.location.reload();
+}
+</script>
+<script language=JavaScript>
+function flatLoad() {
+if ( !parent.IsFullScrMode() )
+	parent.base.highlite();
+DoOnLoad();
+  	
+      
+      if ( parent.IsFullScrMode() && parent.NavPopup && !parent.NavPopup.closed )
+      		parent.NavPopup.focus();
+      	else	
+  		self.focus();
+  	parent.base.SldUpdated( "slide0057.htm" );
+ } 	
+ </script><script language=JavaScript><!--
+function DoOnLoad() { 
+ }//-->
+</script>
+</head>
+<body bgcolor="#000000" onresize="restore()" onload="flatLoad()"
+onclick="DocumentOnClick(event)" onkeypress="_KPH(event)">
+<center><img src=Slide0019.gif border=0 usemap="#Slide0019.gif_map"></center>
+</body>
+</html>
+\ No newline at end of file
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/space.gif b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/space.gif
new file mode 100755
index 00000000..e6cd7808
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/space.gif
diff --git a/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/webqtl_demo2_part1.ppt.ppt b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/webqtl_demo2_part1.ppt.ppt
new file mode 100755
index 00000000..84182823
--- /dev/null
+++ b/web/tutorial/ppt/html/webqtl_demo2_part1.ppt_files/webqtl_demo2_part1.ppt.ppt
diff --git a/web/tutorial/ppt/index.html b/web/tutorial/ppt/index.html
new file mode 100755
index 00000000..3ec43ba2
--- /dev/null
+++ b/web/tutorial/ppt/index.html
@@ -0,0 +1,90 @@
+<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN">
+<HTML><HEAD><TITLE>Powerpoint / GeneNetwork</TITLE>
+<META http-equiv=Content-Type content="text/html; charset=iso-8859-1">
+<base href="http://www.genenetwork.org/">
+<LINK REL="stylesheet" TYPE="text/css" HREF='/css/general.css'>
+<LINK REL="stylesheet" TYPE="text/css" HREF='/css/menu.css'>
+<SCRIPT SRC="/javascript/webqtl.js"></SCRIPT>
+</HEAD>
+<BODY  bottommargin="2" leftmargin="2" rightmargin="2" topmargin="2" text=#000000 bgColor=#ffffff>
+<TABLE cellSpacing=5 cellPadding=4 width="100%" border=0>
+	<TBODY>
+	<TR>
+		<script language="JavaScript" src="/javascript/header.js"></script>
+	</TR>
+	<TR>
+		<TD bgColor=#eeeeee class="solidBorder">
+		<Table width= "100%" cellSpacing=0 cellPadding=5><TR>
+		<!-- Body Start from Here -->
+		<TD vAlign=top width="100%" height=200 bgColor=#eeeeee>
+		<P class="title">GeneNetwork PowerPoint Demonstrations  <A HREF="/webqtl/WebQTL.py?FormID=editHtml"><img src="/images/modify.gif" alt="modify this page" border= 0 valign="middle"></A></P>
+		<blockquote>
+			<P class="subtitle">GeneNetwork Demonstration Part I </P>
+
+<P>Part I: A short introduction on <B>how to exploit GeneNetwork to explore variation and covariation among traits</B>. This 18-slide PowerPoint side show uses the beta amyloid precursor as an example.
+
+			<blockquote>
+				<UL>
+					<LI>View in <A Href="/tutorial/ppt/html/webqtl_demo2_part1.ppt.htm" class="normalsize">HTML</a>
+					<LI>Download <A Href="/tutorial/ppt/ppt/webqtl_demo2_part1.ppt" class="normalsize">Powerpoint</a> file
+				</UL>
+			</blockquote>
+			<P class="subtitle">WebQTL Demonstration Part II </P>
+
+<P>Part II: <B>A continutation that explains <B>how to map chromosomal locations (QTLs) that modulate variation in quantitative traits using the WebQTL mapping module of the GeneNetwork.</B>
+
+
+
+			<blockquote>
+				<UL>
+					<LI>View in <A Href="/tutorial/ppt/html/webqtl_demo2.ppt.htm" class="normalsize">HTML</a>
+					<LI>Download <A Href="/tutorial/ppt/ppt/webqtl_demo2.ppt" class="normalsize">Powerpoint</a> file
+				</UL>
+
+			</blockquote>
+
+
+<P>
+<P>Files last updated by RWW, July 23, 2005.
+
+
+
+
+		</blockquote>	
+		</TD>
+		</TR></TABLE>
+		</TD>
+	</TR>
+	<TR>
+		<TD align=center bgColor=#ddddff class="solidBorder">
+		<TABLE width="90%">
+		<script language='JavaScript' src='/javascript/footer.js'></script>
+		</TABLE>
+		</TD>
+	</TR>
+</TABLE>
+<!-- /Footer -->
+<!-- menu script itself. you should not modify this file -->
+<script language="JavaScript" src="/javascript/menu_new.js"></script>
+<!-- items structure. menu hierarchy and links are stored there -->
+<script language="JavaScript" src="/javascript/menu_items.js"></script>
+<!-- files with geometry and styles structures -->
+<script language="JavaScript" src="/javascript/menu_tpl.js"></script>
+<script language="JavaScript">
+	<!--//
+	// Note where menu initialization block is located in HTML document.
+	// Don't try to position menu locating menu initialization block in
+	// some table cell or other HTML element. Always put it before </body>
+	// each menu gets two parameters (see demo files)
+	// 1. items structure
+	// 2. geometry structure
+	new menu (MENU_ITEMS, MENU_POS);
+	// make sure files containing definitions for these variables are linked to the document
+	// if you got some javascript error like "MENU_POS is not defined", then you've made syntax
+	// error in menu_tpl.js file or that file isn't linked properly.
+	
+	// also take a look at stylesheets loaded in header in order to set styles
+	//-->
+</script>
+</BODY>
+</HTML>
diff --git a/web/tutorial/ppt/ppt/webqtl_demo2.ppt b/web/tutorial/ppt/ppt/webqtl_demo2.ppt
new file mode 100755
index 00000000..ef4ee89f
--- /dev/null
+++ b/web/tutorial/ppt/ppt/webqtl_demo2.ppt
diff --git a/web/tutorial/ppt/ppt/webqtl_demo2_part1.ppt b/web/tutorial/ppt/ppt/webqtl_demo2_part1.ppt
new file mode 100755
index 00000000..19dc7551
--- /dev/null
+++ b/web/tutorial/ppt/ppt/webqtl_demo2_part1.ppt
author	root	2012-05-08 18:39:56 -0500
committer	root	2012-05-08 18:39:56 -0500
commit	ea46f42ee640928b92947bfb204c41a482d80937 (patch)
tree	9b27a4eb852d12539b543c3efee9d2a47ef470f3 /web/tutorial/ppt
parent	056b5253fc3857b0444382aa39944f6344dc1ceb (diff)
download	genenetwork2-ea46f42ee640928b92947bfb204c41a482d80937.tar.gz