Add all the source codes into the github.

1 files changed, 344 insertions, 0 deletions

diff --git a/web/javascript/sortTrait.js b/web/javascript/sortTrait.js
new file mode 100755
index 00000000..7e617572
--- /dev/null
+++ b/web/javascript/sortTrait.js
@@ -0,0 +1,344 @@
+/* Generated Date : 2010-07-20  */ 
+var sArr = [
+{txt:'',val:''},
+{txt:'Database name',val:'1'},
+{txt:'ID number of trait',val:'2'},
+{txt:'Symbol, Gene, Phenotype',val:'3'},
+{txt:'Chr and Mb',val:'4'},
+{txt:'LRS or LOD',val:'5'},
+{txt:'Mean Value',val:'6'}
+
+];
+
+var gArr = [
+{txt:'',val:''},
+{txt:'Database name',val:'1'},
+{txt:'ID number of trait',val:'2'},
+{txt:'Symbol, Gene, Phenotype',val:'3'},
+{txt:'Chr and Mb',val:'4'},
+{txt:'LRS or LOD',val:'5'},
+{txt:'Mean Value',val:'6'}];
+
+var tArr = [
+{txt:'',val:''},
+{txt:'Database name',val:'1'},
+{txt:'ID number of trait',val:'2'},
+{txt:'Symbol, Gene, Phenotype',val:'3'},
+{txt:'Chr and Mb',val:'4'},
+{txt:'LRS or LOD',val:'5'},
+{txt:'Mean Value',val:'6'}];
+
+var lArr = [
+ null,
+[1,2,3],
+[1,2,4],
+[1,2,5],
+[1,2,6],
+[1,3,2],
+[1,3,4],
+[1,3,5],
+[1,3,6],
+[1,4,2],
+[1,4,3],
+[1,4,5],
+[1,4,6],
+[1,5,2],
+[1,5,3],
+[1,5,4],
+[1,5,6],
+[1,6,2],
+[1,6,3],
+[1,6,4],
+[1,6,5],
+[2,1,3],
+[2,1,4],
+[2,1,5],
+[2,1,6],
+[2,3,1],
+[2,3,4],
+[2,3,5],
+[2,3,6],
+[2,4,1],
+[2,4,3],
+[2,4,5],
+[2,4,6],
+[2,5,1],
+[2,5,3],
+[2,5,4],
+[2,5,6],
+[2,6,1],
+[2,6,3],
+[2,6,4],
+[2,6,5],
+[3,1,2],
+[3,1,4],
+[3,1,5],
+[3,1,6],
+[3,2,1],
+[3,2,4],
+[3,2,5],
+[3,2,6],
+[3,4,1],
+[3,4,2],
+[3,4,5],
+[3,4,6],
+[3,5,1],
+[3,5,2],
+[3,5,4],
+[3,5,6],
+[3,6,1],
+[3,6,2],
+[3,6,4],
+[3,6,5],
+[4,1,2],
+[4,1,3],
+[4,1,5],
+[4,1,6],
+[4,2,1],
+[4,2,3],
+[4,2,5],
+[4,2,6],
+[4,3,1],
+[4,3,2],
+[4,3,5],
+[4,3,6],
+[4,5,1],
+[4,5,2],
+[4,5,3],
+[4,5,6],
+[4,6,1],
+[4,6,2],
+[4,6,4],
+[4,6,5],
+[5,1,2],
+[5,1,3],
+[5,1,4],
+[5,1,6],
+[5,2,1],
+[5,2,3],
+[5,2,4],
+[5,2,6],
+[5,3,1],
+[5,3,2],
+[5,3,4],
+[5,3,6],
+[5,4,1],
+[5,4,2],
+[5,4,3],
+[5,4,6],
+[5,6,1],
+[5,6,2],
+[5,6,3],
+[5,6,4],
+[6,1,2],
+[6,1,3],
+[6,1,4],
+[6,1,5],
+[6,2,1],
+[6,2,3],
+[6,2,4],
+[6,2,5],
+[6,3,1],
+[6,3,2],
+[6,3,4],
+[6,3,5],
+[6,4,1],
+[6,4,2],
+[6,4,3],
+[6,4,5],
+[6,5,1],
+[6,5,2],
+[6,5,3],
+[6,5,4]];
+
+/* 
+*  input: selectObjId (designated select menu, such as sort1, sort2, etc... )
+*  function: setting options value for select menu dynamically based on linkage array(lArr)
+*  output: null
+*/
+function fillOptions(selectObjId)
+{
+    
+		
+	if(selectObjId==null)
+	{
+		var sort1Obj = document.getElementsByName('sort1')[0];
+		
+		var len = sArr.length;
+		for (var i=1; i < len; i++) { 
+		// setting sort1' option
+		sort1Obj.options[i-1] = new Option(sArr[i].txt, sArr[i].val);
+
+		
+		}
+		fillOptions('sort1');
+	}else if(selectObjId=='sort1')
+	{
+	    var sort1Obj = document.getElementsByName('sort1')[0];
+		var sort2Obj = document.getElementsByName('sort2')[0];
+		var len = lArr.length;
+		var arr = [];
+		var idx = 0;
+		for (var i=1; i < len; i++) {
+			//get sort2 info from lArr
+			if(lArr[i][0]==(getIndexByValue('sort1',sort1Obj.value)).toString()&&!Contains(arr,lArr[i][1]))
+			{
+				arr[idx++]=lArr[i][1];
+			}  
+		}
+		idx=0;
+		len = arr.length;
+		removeOptions("sort2");
+		for (var i=0; i < len; i++) {
+			// setting sort2's option
+			sort2Obj.options[idx++] = new Option(gArr[arr[i]].txt, gArr[arr[i]].val); 
+		}
+		fillOptions('sort2');
+	}else if(selectObjId=='sort2')
+	{
+	    var sort1Obj = document.getElementsByName('sort1')[0];
+		var sort2Obj = document.getElementsByName('sort2')[0];
+		var sort3Obj = document.getElementsByName('sort3')[0];
+		var len = lArr.length;
+		var arr = [];
+		var idx = 0;
+		for (var i=1; i < len; i++) {
+			//get sort2 info from lArr
+			if(lArr[i][0]==(getIndexByValue('sort1',sort1Obj.value)).toString()&&lArr[i][1]==(getIndexByValue('sort2',sort2Obj.value)).toString()&&!Contains(arr,lArr[i][2]))
+			{
+				arr[idx++]=lArr[i][2];
+			}  
+		}
+		idx=0;
+		len = arr.length;
+		removeOptions("sort3");
+		for (var i=0; i < len; i++) {
+			// setting sort3's option
+			sort3Obj.options[idx++] = new Option(tArr[arr[i]].txt, tArr[arr[i]].val); 
+		}
+		fillOptions('sort3');
+	}
+}
+
+/* 
+*  input: arr (targeted array); obj (targeted value)
+*  function: check whether targeted array contains targeted value or not
+*  output: return true, if array contains targeted value, otherwise return false
+*/
+function Contains(arr,obj) { 
+	var i = arr.length; 
+	while (i--) { 
+		if (arr[i] == obj) { 
+		return true; 
+		}
+	} 
+	return false; 
+} 
+
+updateChocie();
+
+/* 
+* input: selectObj (designated select menu, such as sort1, sort2, etc... )
+* function: clear designated select menu's option
+* output: null
+*/
+function removeOptions(selectObj) {     
+	if (typeof selectObj != 'object'){         
+		selectObj = document.getElementsByName(selectObj)[0];
+	}        
+	var len = selectObj.options.length;      
+	for (var i=0; i < len; i++)     {         
+	// clear current selection       
+		selectObj.options[0] = null;    
+	} 
+} 
+
+/* 
+*  input: selectObjId (designated select menu, such as sort1, sort2, etc... )
+*         Value: target value
+*  function: retrieve Index info of target value in designated array
+*  output: index info
+*/
+function getIndexByValue(selectObjId,val)
+{
+	if(selectObjId=='sort1')
+	{
+		for(var i=1;i<sArr.length;i++)
+			if(sArr[i].val==val)
+				return i;
+	}else if(selectObjId=='sort2')
+	{
+		for(var i=1;i<gArr.length;i++)
+			if(gArr[i].val==val)
+				return i;
+	}else if(selectObjId=='sort3')
+	{
+		for(var i=1;i<tArr.length;i++)
+			if(tArr[i].val==val)
+				return i;
+	}
+	else return;
+}
+
+function setDefault(thisform){
+	setCookie('cookieTest', 'cookieTest', 1);
+	var cookieTest = getCookie('cookieTest');
+	delCookie('cookieTest');
+	if (cookieTest){
+		var defaultSort1 = thisform.sort1.value;
+		setCookie('defaultSort1', defaultSort1, 10);
+		var defaultSort2 = thisform.sort2.value;
+		setCookie('defaultSort2', defaultSort2, 10);
+		var defaultSort3 = thisform.sort3.value;
+		setCookie('defaultSort3', defaultSort3, 10);
+		updateChocie();			
+	}
+}
+/* 
+*  input: objId (designated select menu, such as sort1, sort2, etc... )
+*  		  val(targeted value)
+*  function: setting option's selected status for designated select menu based on target value, also update the following select menu 
+*  output: return true if selected status has been set, otherwise return false.
+*/
+function setChoice(objId,val)
+{
+	var Obj = document.getElementsByName(objId)[0];
+	var idx=-1;
+	for(i=0;i<Obj.options.length;i++){
+		if(Obj.options[i].value==val){
+			idx=i;
+			break;
+		}
+	}
+	if(idx>=0){
+		//setting option's selected status 
+		Obj.options[idx].selected=true;
+		//update the following select menu
+		fillOptions(objId)
+		return true;
+	}else{
+		return false;
+	}
+}
+
+// setting option's selected status based on default setting or cookie setting for sort1, sort2, and sort3 select menu
+function updateChocie(){
+	fillOptions(null);	
+	//define default value
+	var defaultSort1 = 1
+	var defaultSort2 = 3
+	var defaultSort3 = 4
+	
+	//if cookie exists, then use cookie value, otherwise use default value
+	var cookieSort1 = getCookie('defaultSort1');
+	if(cookieSort1)  defaultSort1= cookieSort1 
+	var cookieSort2 = getCookie('defaultSort2');
+	if(cookieSort2)  defaultSort2 = cookieSort2;
+	var cookieSort3 = getCookie('defaultSort3');
+	if(cookieSort3 )  defaultSort3 = cookieSort3; 
+
+	//setting option's selected status
+	if(!setChoice('sort1',defaultSort1)){return;}
+	if(!setChoice('sort2',defaultSort2)){return;}
+	if(!setChoice('sort3',defaultSort3)){return;}
+}
\ No newline at end of file