Merge branch 'master' into lmm

1 files changed, 0 insertions, 115 deletions

diff --git a/web/javascript/networkGraph.js b/web/javascript/networkGraph.js
deleted file mode 100755
index 206cab2a..00000000
--- a/web/javascript/networkGraph.js
+++ /dev/null
@@ -1,115 +0,0 @@
-// This JavaScript was written by Zach Sloan in 2009-2010.
-// This script is used in the Network Graph output from the Trait Collection window
-
-var searchResults = document.getElementById('searchResult').value.split("\t");
-var symbolList = document.getElementById('symbolList').value.split("\t");
-var originalThreshold = document.getElementById('kValue').value;
-addTraitSelection();
-		
-function addTraitSelection()
-{
-    var gType = document.getElementById('gType').value;
-    var nodeSelect = document.getElementById('nodeSelect');
-    var newDropDown = document.createElement('newDrop');
-        
-    newDropDown.innerHTML = generateDropdownHtml();
-    
-    if (gType == "radial"){         
-        nodeSelect.appendChild(newDropDown);
-        originalLock = document.getElementById('lock').value;
-        document.getElementById('lock').value = "yes";
-        if ( originalThreshold == "undefined"){
-            originalThreshold = document.getElementById('kValue').value;
-        }
-        document.getElementById('kValue').value = "0.0";
-        
-    }
-    else{   
-        try{
-            nodeSelect.removeChild(nodeSelect.childNodes[0]);
-            document.getElementById('lock').value = originalLock;
-            document.getElementById('kValue').value = originalThreshold;
-        } catch(err){
-            originalLock = document.getElementById('lock').value;
-            originalThreshold = document.getElementById('kValue').value;
-        }
-    }
-}
-
-function generateDropdownHtml(){
-    var html = "";
-    
-    html += "<td align='right'>&nbsp;<select name='traitNode' id='traitNode'>";
-    
-    html += "<option value='none'>Select Central Node</option>";
-    html += "<option value='auto'>Auto</option>";
-    
-    for (var i=0, len=searchResults.length; i<len; ++i)
-    {
-        html += "<option value='" + searchResults[i] + "'>" + symbolList[i] + ": " + searchResults[i] + "</option>";
-    }
-    
-    html += "</select>";
-    html += "</td>";
-    
-    return html;
-}
-
-function sortSearchResults(myForm)
-{
-    var newSearchResults = searchResults
-    
-    if (document.getElementById('traitNode')){
-        var selectedNode = document.getElementById('traitNode').value;
-        
-        if (selectedNode == "none")
-        {
-            alert("Please select a central node for your radial graph.");
-            return false;
-        }
-    
-        else if (selectedNode == "auto")
-        {
-            var newSelectedNode = String(searchResults[parseInt(document.getElementById('optimalNode').value)]);
-        }
-        
-        else
-        {
-            var newSelectedNode = selectedNode;
-        }
-        
-        newSearchResults.splice(searchResults.indexOf(newSelectedNode), 1);
-    
-        newSearchResults.splice(0, 0, newSelectedNode);      
-    }
-    
-    var gType = document.getElementById('gType').value;
-    
-    if (gType == "none")
-    {
-        alert("Please select a graph method.");
-        return false;
-    }
-           
-    document.getElementById('searchResult').value = newSearchResults.join("\t"); 
-    
-    databaseFunc(myForm, 'networkGraph');
-    
-}
-
-function changeThreshold(){
-    var lock = document.getElementById('lock').value;
-    var threshold = document.getElementById('kValue').value;
-    
-    if (lock == "yes"){
-        if(threshold != 0){
-            originalThreshold = threshold;
-            document.getElementById('kValue').value = "0.0";
-        }
-    }
-    
-    else if (lock == "no" && originalThreshold != 0){
-        document.getElementById('kValue').value = originalThreshold;
-    }
-}
-