aboutsummaryrefslogtreecommitdiff
path: root/web/gemma/output/HLC_output.log.txt
diff options
context:
space:
mode:
authorZachary Sloan2014-11-17 17:23:48 +0000
committerZachary Sloan2014-11-17 17:23:48 +0000
commit04e6d9febf2353b0d3ec057ee52a7239ffeb3182 (patch)
tree304e4e2793e52d1fea14582adf133843913fa7d2 /web/gemma/output/HLC_output.log.txt
parentc38fef6d90787ef20e3cdcdb873dbd59f8251391 (diff)
parent9c272d1b2342b8f8e62927e9f1bfab9594946ab4 (diff)
downloadgenenetwork2-04e6d9febf2353b0d3ec057ee52a7239ffeb3182.tar.gz
Merge /home/zas1024/gene
Diffstat (limited to 'web/gemma/output/HLC_output.log.txt')
-rw-r--r--web/gemma/output/HLC_output.log.txt22
1 files changed, 11 insertions, 11 deletions
diff --git a/web/gemma/output/HLC_output.log.txt b/web/gemma/output/HLC_output.log.txt
index 773e86c4..fc7975f4 100644
--- a/web/gemma/output/HLC_output.log.txt
+++ b/web/gemma/output/HLC_output.log.txt
@@ -10,19 +10,19 @@
## number of phenotypes = 1
## number of total SNPs = 358499
## number of analyzed SNPs = 273349
-## REMLE log-likelihood in the null model = -4252.51
-## MLE log-likelihood in the null model = -4261.76
-## pve estimate in the null model = 0.314624
-## se(pve) in the null model = 0.403683
-## vg estimate in the null model = 2.61389e+07
-## ve estimate in the null model = 1.88332e+07
-## beta estimate in the null model = 5107.48
-## se(beta) = 210.014
+## REMLE log-likelihood in the null model = -3650.56
+## MLE log-likelihood in the null model = -3657.67
+## pve estimate in the null model = 0.840196
+## se(pve) in the null model = 0.106606
+## vg estimate in the null model = 4.2245e+06
+## ve estimate in the null model = 265756
+## beta estimate in the null model = 1202.14
+## se(beta) = 24.9475
##
## Computation Time:
-## total computation time = 2.61417 min
+## total computation time = 2.73533 min
## computation time break down:
## time on eigen-decomposition = 0.00166667 min
-## time on calculating UtX = 0.412 min
-## time on optimization = 2.03567 min
+## time on calculating UtX = 0.417333 min
+## time on optimization = 2.146 min
##