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author | Zachary Sloan | 2014-05-19 22:03:31 +0000 |
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committer | Zachary Sloan | 2014-05-19 22:03:31 +0000 |
commit | 515662ecabd5d3a90eef6987aa5f8d4dbe63611f (patch) | |
tree | 60fd5f393190dad650e527f8cdff365e313039c9 /web/gemma/output/HLC_output.log.txt | |
parent | 759a7a23b0ea848b8c8ffe2804841322254d8696 (diff) | |
download | genenetwork2-515662ecabd5d3a90eef6987aa5f8d4dbe63611f.tar.gz |
Fixed sorting on the show trait page
Added/improved the x and y axis on the bar graph and histogram
GEMMA working but still really slow
Diffstat (limited to 'web/gemma/output/HLC_output.log.txt')
-rw-r--r-- | web/gemma/output/HLC_output.log.txt | 22 |
1 files changed, 11 insertions, 11 deletions
diff --git a/web/gemma/output/HLC_output.log.txt b/web/gemma/output/HLC_output.log.txt index 9dd3d75b..e8107112 100644 --- a/web/gemma/output/HLC_output.log.txt +++ b/web/gemma/output/HLC_output.log.txt @@ -10,19 +10,19 @@ ## number of phenotypes = 1 ## number of total SNPs = 358499 ## number of analyzed SNPs = 273349 -## REMLE log-likelihood in the null model = -3121.45 -## MLE log-likelihood in the null model = -3127.35 -## pve estimate in the null model = 0.830303 -## se(pve) in the null model = 0.108674 -## vg estimate in the null model = 347865 -## ve estimate in the null model = 23515.2 -## beta estimate in the null model = 454.076 -## se(beta) = 7.42097 +## REMLE log-likelihood in the null model = -4252.51 +## MLE log-likelihood in the null model = -4261.76 +## pve estimate in the null model = 0.314624 +## se(pve) in the null model = 0.403683 +## vg estimate in the null model = 2.61389e+07 +## ve estimate in the null model = 1.88332e+07 +## beta estimate in the null model = 5107.48 +## se(beta) = 210.014 ## ## Computation Time: -## total computation time = 2.67 min +## total computation time = 2.5965 min ## computation time break down: ## time on eigen-decomposition = 0.0015 min -## time on calculating UtX = 0.4125 min -## time on optimization = 2.10517 min +## time on calculating UtX = 0.414167 min +## time on optimization = 2.03267 min ## |