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author | zsloan | 2018-04-13 15:47:42 +0000 |
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committer | zsloan | 2018-04-13 15:47:42 +0000 |
commit | eb24f53d7f5210ead3748772bb4126f78520f32c (patch) | |
tree | e58268dc13fb494818095021bf5e8510da6f7684 /test/requests/mapping_tests.py | |
parent | 9276e5eee9be7ed37fda5ea88aec2f1a238864ad (diff) | |
parent | 270f86c41f7c90cc4ca51bca0aec789a09a36a0e (diff) | |
download | genenetwork2-eb24f53d7f5210ead3748772bb4126f78520f32c.tar.gz |
Resolved conflicts for pulling from testing branch
Diffstat (limited to 'test/requests/mapping_tests.py')
-rw-r--r-- | test/requests/mapping_tests.py | 43 |
1 files changed, 43 insertions, 0 deletions
diff --git a/test/requests/mapping_tests.py b/test/requests/mapping_tests.py new file mode 100644 index 00000000..fd20df11 --- /dev/null +++ b/test/requests/mapping_tests.py @@ -0,0 +1,43 @@ +from __future__ import print_function +import re +import json +import requests +from lxml.html import fromstring + +def get_data(list_item): + try: + value = list_item[1] + except: + value = None + #print("list_item:", list_item, "==>", value) + return value + +def load_data_from_file(): + filename = "../test/data/input/mapping/1435395_s_at_HC_M2_0606_P.json" + file_handle = open(filename, "r") + file_data = json.loads(file_handle.read().encode("utf-8")) + return file_data + +def check_pylmm_tool_selection(host, data): + data["method"] = "pylmm" + page = requests.post(host+"/marker_regression", data=data) + doc = fromstring(page.text) + form = doc.forms[1] + assert form.fields["dataset"] == "HC_M2_0606_P" + assert form.fields["value:BXD1"] == "15.034" # Check value in the file + +def check_R_qtl_tool_selection(host, data): + pass + +def check_CIM_tool_selection(host, data): + pass + +def check_mapping(args_obj, parser): + print("") + print("Checking mapping") + + host = args_obj.host + data = load_data_from_file() + check_pylmm_tool_selection(host, data) + check_R_qtl_tool_selection(host, data) + check_CIM_tool_selection(host, data) |