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authorPjotr Prins2016-09-25 08:47:03 +0000
committerPjotr Prins2016-09-25 08:47:03 +0000
commite8a5cb1fba08f5d35f7392a1f8af54bf8ae65821 (patch)
treed375548d404203453b3a535a3c50325c6a824dde /test/lib/mapping.rb
parenta15dda37ffa6f77dbbc349302760c9a25541df9e (diff)
downloadgenenetwork2-e8a5cb1fba08f5d35f7392a1f8af54bf8ae65821.tar.gz
Testing: looking for a way to run pylmm
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+# In these tests we navigate from the main page to a specific trait then hit the different mapping tool buttons (In this case pylMM and r/qtl) followed by computing the results (marker regressions).
+
+
+class MappingTest
+end
+
+describe MappingTest do
+ before do
+ @agent = Mechanize.new
+ @agent.agent.http.ca_file = '/etc/ssl/certs/ca-certificates.crt'
+ end
+
+ describe MappingTest do
+ it "pyLMM mapping tool selection" do
+ url = $host+'/show_trait?trait_id=1435395_s_at&dataset=HC_M2_0606_P'
+ page = @agent.get(url)
+ # get the form
+ # form = @agent.page.form_with(:name => "my-form")
+ # get the button you want from the form
+ # page.forms.each do |form|
+ # p form
+ # end
+ # button = page.button_with(:value => "pylmm_compute")
+ # submit the form using that button
+ # agent.submit(form, button)
+ # link = page.link_with(text: 'pyLMM')
+ # page = link.click
+ # puts page.uri
+ # link = page.link_with(text: 'Compute')
+ # page = link.click
+ # puts page.uri
+ # probe_link.uri.to_s.must_equal "/marker_regression"
+ end
+ end
+
+end
+
+describe MappingTest do
+ it "R/qtl mapping tool selection" do
+ break if $options[:skip_broken]
+ page = @agent.get($host+'/show_trait?trait_id=1435395_s_at&dataset=HC_M2_0606_P')
+ link = page.link_with(text: 'R/qtl')
+ page = link.click
+ puts page.uri
+ form.field_with(:name => 'Methods').options[2].select
+ link = page.link_with(text: 'Compute')
+ page = link.click
+ puts page.uri
+ probe_link.uri.to_s.must_equal "/marker_regression"
+ end
+end