diff options
| author | Pjotr Prins | 2020-04-27 16:57:43 -0500 |
|---|---|---|
| committer | Pjotr Prins | 2020-04-28 07:48:32 -0500 |
| commit | 1b83ff353bf86709643c671ff78a69fd9ede72a8 (patch) | |
| tree | 85bdfc7d6bc9d7d412ce993296331e7a206cd96b /scripts | |
| parent | 2fbd5b1283cbbba19edf27ec0109e64ef8bc4723 (diff) | |
| download | genenetwork2-1b83ff353bf86709643c671ff78a69fd9ede72a8.tar.gz | |
Added a script for a default runner
Diffstat (limited to 'scripts')
| -rwxr-xr-x | scripts/run_debug.sh | 20 |
1 files changed, 20 insertions, 0 deletions
diff --git a/scripts/run_debug.sh b/scripts/run_debug.sh new file mode 100755 index 00000000..be7ecdb8 --- /dev/null +++ b/scripts/run_debug.sh @@ -0,0 +1,20 @@ +#! /bin/bash +# +# PLEASE DO NOT CHANGE THIS FILE - copy it elsewhere to run +# +# Run with GN2_PROFILE and SERVER_PORT overrides, e.g. +# +# env GN2_PROFILE=/usr/local/guix-profiles/gn-latest SERVER_PORT=5010 scripts/run_debug.sh + +[ -z $GN2_PROFILE ] && export GN2_PROFILE=/usr/local/guix-profiles/gn-latest +[ -z $SERVER_PORT ] && export SERVER_PORT=5010 + +echo Running on port $SERVER_PORT from $GN2_PROFILE + +cwd=`pwd` +echo Running source from $cwd + +mkdir -p ~/tmp + +env TMPDIR=~/tmp WEBSERVER_MODE=DEBUG LOG_LEVEL=DEBUG GENENETWORK_FILES=/export/data/genenetwork/genotype_files/ SQL_URI=mysql://webqtlout:webqtlout@localhost/db_webqtl ./bin/genenetwork2 etc/default_settings.py -gunicorn-dev + |