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authorAlexanderlacuna2020-10-29 16:14:32 +0300
committerAlexanderlacuna2020-10-29 16:14:32 +0300
commit480217fdde68589ad84799c3b5df2c61608494ad (patch)
treea39c1be021bfe59869435ea97cfb93890609a2a0 /scripts/maintenance/readProbeSetSE_v7.py
parent18304a9b20bd4180b40be8296df26c2a0acf62fa (diff)
parent6e6911b466c2727b16a190d8b714f55d7842d7e2 (diff)
downloadgenenetwork2-480217fdde68589ad84799c3b5df2c61608494ad.tar.gz
Merge branch 'testing' of https://github.com/genenetwork/genenetwork2 into test-branch
Diffstat (limited to 'scripts/maintenance/readProbeSetSE_v7.py')
-rwxr-xr-xscripts/maintenance/readProbeSetSE_v7.py6
1 files changed, 3 insertions, 3 deletions
diff --git a/scripts/maintenance/readProbeSetSE_v7.py b/scripts/maintenance/readProbeSetSE_v7.py
index edd9e7b0..2cfe2e07 100755
--- a/scripts/maintenance/readProbeSetSE_v7.py
+++ b/scripts/maintenance/readProbeSetSE_v7.py
@@ -72,14 +72,14 @@ GeneList = []
isCont = 1
header = fp.readline()
header = header.strip().split('\t')
-header = list(map(string.strip, header))
+header = [item.strip() for item in header]
nfield = len(header)
line = fp.readline()
kj = 0
while line:
line2 = line.strip().split('\t')
- line2 = list(map(string.strip, line2))
+ line2 = [item.strip() for item in line2]
if len(line2) != nfield:
isCont = 0
print(("Error : " + line))
@@ -110,7 +110,7 @@ isCont = 1
fp.seek(0)
header = fp.readline()
header = header.strip().split('\t')
-header = list(map(string.strip, header))
+header = [item.strip() for item in header]
header = list(map(translateAlias, header))
header = header[dataStart:]
Ids = []