Merge branch 'master' of https://github.com/zsloan/genenetwork

1 files changed, 35 insertions, 5 deletions

diff --git a/misc/notes.txt b/misc/notes.txt
index 621d95d3..ede8176b 100644
--- a/misc/notes.txt
+++ b/misc/notes.txt
@@ -1,5 +1,3 @@
-fubar
-
 Clone code from git repository:
 git clone http://github.com/zsloan/genenetwork.git gene 
 
@@ -10,8 +8,7 @@ Add all files in current directory branch to be staged to be committed
 git add -A
 
 Git push to my github repository
-git push https://github.com/zsloan/genenetwork.git flask
-
+git push https://github.com/zsloan/genenetwork.git master
 
 Get the default path being used when a command is typed:
 which _______
@@ -95,6 +92,15 @@ python runserver.py
 
 ===========================================
 
+UFW - default firewall confirguation tool for Ubuntu; eases iptables firewall configuration
+
+Enable UFW:
+sudo ufw enable
+Check status of UFW:
+sudo ufw status verbose
+
+===========================================
+
 Update user password:
 use mysql;
 UPDATE user SET password=PASSWORD('whatever') WHERE user='webqtl';
@@ -120,7 +126,7 @@ pylint --help
 
 Start screen session:
 
-If "no option -R":
+If "no option -R" or running for first time:
 byobu-select-backend
 2. screen
 
@@ -239,6 +245,11 @@ To iterate through dictionary items: for X, Y in MyDictionary.items():
 
 ===========================================
 
+Change import path from command line
+export PYTHONPATH=~/gene/wqflask (or whatever)
+
+===========================================
+
 Create symbolic link:
 ln -s dir_to_link_to linking_dir
 
@@ -258,7 +269,26 @@ grep -ir (search string) (directory)
 
 ===========================================
 
+Change owner/group:
+
+chown zas1024 somefile (change owner of somefile to zas1024)
+chown zas1024: somefile (change owner and group of somefile to zas1024)
+sudo chown root: somefile (change owner/group of somefile to root)
+
+Change permissions:
+
+chmod g-wr (remove write/read privileges for group)
+chmod g+w (add write privileges for group)
+chmod u+rwx (add read, write, and execute privileges for user)
+etc.
+
+===========================================
+
 MySQL Things -
 
 Create fulltext (MATCH AGAINST syntax) index:
 CREATE FULLTEXT INDEX __________ ON Table (Column);
+
+If <4 character searches not working:
+Add ft_min_word_len = 2 (to make te minimum characters 2) to config file
+Rebuild relevant tables with fulltext indexes with "REPAIR TABLE _______ QUICK"