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author | zsloan | 2018-04-13 15:47:42 +0000 |
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committer | zsloan | 2018-04-13 15:47:42 +0000 |
commit | eb24f53d7f5210ead3748772bb4126f78520f32c (patch) | |
tree | e58268dc13fb494818095021bf5e8510da6f7684 /doc | |
parent | 9276e5eee9be7ed37fda5ea88aec2f1a238864ad (diff) | |
parent | 270f86c41f7c90cc4ca51bca0aec789a09a36a0e (diff) | |
download | genenetwork2-eb24f53d7f5210ead3748772bb4126f78520f32c.tar.gz |
Resolved conflicts for pulling from testing branch
Diffstat (limited to 'doc')
-rw-r--r-- | doc/elasticsearch.org | 41 |
1 files changed, 41 insertions, 0 deletions
diff --git a/doc/elasticsearch.org b/doc/elasticsearch.org new file mode 100644 index 00000000..18adfc8b --- /dev/null +++ b/doc/elasticsearch.org @@ -0,0 +1,41 @@ +* Elasticsearch + +To get the right environment, first you can get a python REPL with something like + +: env GN2_PROFILE=~/opt/gn-latest ./bin/genenetwork2 ../etc/default_settings.py -cli python + +(make sure to use the correct GN2_PROFILE!) + +Next try + +#+BEGIN_SRC python + +from elasticsearch import Elasticsearch, TransportError + +es = Elasticsearch([{ "host": 'localhost', "port": '9200' }]) + +# Dump all data + +es.search("*") + +# To fetch an E-mail record from the users index + +record = es.search( + index = 'users', doc_type = 'local', body = { + "query": { "match": { "email_address": "myname@email.com" } } + }) + +# It is also possible to do wild card matching + +q = { "query": { "wildcard" : { "full_name" : "pjot*" } }} +es.search(index = 'users', doc_type = 'local', body = q) + +# To get elements from that record: + +record['hits']['hits'][0][u'_source']['full_name'] +u'Pjotr' + +record['hits']['hits'][0][u'_source']['email_address'] +u"myname@email.com" + +#+END_SRC |