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| author | BonfaceKilz | 2020-09-28 18:13:19 +0300 |
|---|---|---|
| committer | BonfaceKilz | 2020-09-28 18:13:19 +0300 |
| commit | da6098574f8b410386e84f07fd0e8d0eed39e40d (patch) | |
| tree | 5da9a54c80ea4525aa2fb08f9dc3012c99626ed9 /doc | |
| parent | d34258bed3ef13350499414100401df3bf08a105 (diff) | |
| parent | 367de7d8bd822a80cdc035a219b814f0b268b65f (diff) | |
| download | genenetwork2-da6098574f8b410386e84f07fd0e8d0eed39e40d.tar.gz | |
Merge branch 'build/python3-migration' of github.com:BonfaceKilz/genenetwork2 into build/python3-migration
Diffstat (limited to 'doc')
| -rw-r--r-- | doc/GUIX-Reproducible-from-source.org | 6 | ||||
| -rw-r--r-- | doc/README.org | 2 | ||||
| -rw-r--r-- | doc/development.org | 4 |
3 files changed, 6 insertions, 6 deletions
diff --git a/doc/GUIX-Reproducible-from-source.org b/doc/GUIX-Reproducible-from-source.org index 19e4d14f..fffa9571 100644 --- a/doc/GUIX-Reproducible-from-source.org +++ b/doc/GUIX-Reproducible-from-source.org @@ -167,7 +167,7 @@ the Guix suggested environment vars. Check the output of #+begin_src bash guix package --search-paths -export PYTHONPATH="/root/.guix-profile/lib/python2.7/site-packages" +export PYTHONPATH="/root/.guix-profile/lib/python3.8/site-packages" export R_LIBS_SITE="/root/.guix-profile/site-library/" #+end_src @@ -265,7 +265,7 @@ software. If something is not working, take a hint from the settings file that comes in the Guix installation. It sits in something like -: cat ~/.guix-profile/lib/python2.7/site-packages/genenetwork2-2.0-py2.7.egg/etc/default_settings.py +: cat ~/.guix-profile/lib/python3.8/site-packages/genenetwork2-2.0-py2.7.egg/etc/default_settings.py ** Set up nginx port forwarding @@ -380,7 +380,7 @@ After setting the paths for the server #+begin_src bash export PATH=~/.guix-profile/bin:$PATH -export PYTHONPATH="$HOME/.guix-profile/lib/python2.7/site-packages" +export PYTHONPATH="$HOME/.guix-profile/lib/python3.8/site-packages" export R_LIBS_SITE="$HOME/.guix-profile/site-library/" export GUIX_GTK3_PATH="$HOME/.guix-profile/lib/gtk-3.0" export GI_TYPELIB_PATH="$HOME/.guix-profile/lib/girepository-1.0" diff --git a/doc/README.org b/doc/README.org index 46df03c7..43c92e3c 100644 --- a/doc/README.org +++ b/doc/README.org @@ -218,7 +218,7 @@ information given by guix: On one system: -: export PYTHONPATH="$HOME/.guix-profile/lib/python2.7/site-packages" +: export PYTHONPATH="$HOME/.guix-profile/lib/python3.8/site-packages" : export R_LIBS_SITE="$HOME/.guix-profile/site-library/" : export GEM_PATH="$HOME/.guix-profile/lib/ruby/gems/2.2.0" diff --git a/doc/development.org b/doc/development.org index e65ccd58..cd3beea3 100644 --- a/doc/development.org +++ b/doc/development.org @@ -67,11 +67,11 @@ You can install a Python package locally with pip, e.g. pip install hjson #+END_SRC -This installed in ~$HOME/.local/lib/python2.7/site-packages~. To add +This installed in ~$HOME/.local/lib/python3.8/site-packages~. To add the search path for GeneNetwork use the environment variable #+BEGIN_SRC sh -export PYTHON_GN_PATH=$HOME/.local/lib/python2.7/site-packages +export PYTHON_GN_PATH=$HOME/.local/lib/python3.8/site-packages #+END_SRC Now you should be able to do |