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author | Pjotr Prins | 2016-11-03 18:32:23 +0000 |
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committer | Pjotr Prins | 2016-11-03 18:32:23 +0000 |
commit | 4cd2b9769c726e53fed636c1201b93e752da34f1 (patch) | |
tree | aa34a38f592faa728853cb21b443bdbd79f7b00a /doc/README.org | |
parent | d4def6dd1ac052b7dd1292cedbca3d322e37f399 (diff) | |
download | genenetwork2-4cd2b9769c726e53fed636c1201b93e752da34f1.tar.gz |
Updated to use gn-deploy
Diffstat (limited to 'doc/README.org')
-rw-r--r-- | doc/README.org | 14 |
1 files changed, 7 insertions, 7 deletions
diff --git a/doc/README.org b/doc/README.org index cf76d7ab..9c57953d 100644 --- a/doc/README.org +++ b/doc/README.org @@ -105,15 +105,15 @@ guix package -i git export GIT_SSL_CAINFO=/etc/ssl/certs/ca-certificates.crt #+end_src -check out the git repositories (gn-stable branch) +check out the git repositories (gn-deploy branch) #+begin_src bash cd ~ mkdir genenetwork cd genenetwork -git clone --branch gn-stable https://github.com/genenetwork/guix-bioinformatics -git clone --branch gn-stable --recursive https://github.com/genenetwork/guix guix-gn-stable -cd guix-gn-stable +git clone --branch gn-deploy https://github.com/genenetwork/guix-bioinformatics +git clone --branch gn-deploy --recursive https://github.com/genenetwork/guix guix-gn-deploy +cd guix-gn-deploy #+end_src bash ** Step 3: Authorize the GN Guix server @@ -147,7 +147,7 @@ GNU Guix package path by pointing the package path to our repository: #+begin_src bash rm /root/.config/guix/latest -ln -s ~/genenetwork/guix-gn-stable/ /root/.config/guix/latest +ln -s ~/genenetwork/guix-gn-deploy/ /root/.config/guix/latest #+end_src Now check whether you can find the GN2 package with @@ -368,7 +368,7 @@ Create, install and run a recent version of the guix-daemon by compiling the guix repository you have installed with git in step 2. Follow [[https://github.com/pjotrp/guix-notes/blob/master/INSTALL.org#building-gnu-guix-from-source-using-guix][these]] steps carefully after -: cd ~/genenetwork/guix-gn-stable +: cd ~/genenetwork/guix-gn-deploy Make sure to restart the guix daemon and run guix client from this directory. @@ -487,7 +487,7 @@ and a download of the test database. <pjotrp> right? <user01> yep <user01> set to the ones in ~/.guix-profile/ -<pjotrp> good, and you are in gn-stable-guix repo [07:06] +<pjotrp> good, and you are in gn-deploy-guix repo [07:06] <user01> yep [07:07] <pjotrp> git log shows |