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authorPjotr Prins2016-06-09 09:49:10 +0000
committerPjotr Prins2016-06-09 09:49:10 +0000
commitf5778c492dfb05ba413405d8b0e758b886c573f9 (patch)
tree1032235dcba2f134d0d0d0afd5202b3b13a081a6 /doc/README.org
parentb989351195cb0ecb14f26773b4ab547558d1e662 (diff)
downloadgenenetwork2-f5778c492dfb05ba413405d8b0e758b886c573f9.tar.gz
Doc: moved graph to a lower section
Diffstat (limited to 'doc/README.org')
-rw-r--r--doc/README.org15
1 files changed, 10 insertions, 5 deletions
diff --git a/doc/README.org b/doc/README.org
index 7b410305..fc64983e 100644
--- a/doc/README.org
+++ b/doc/README.org
@@ -9,6 +9,7 @@
- [[#step-3-authorize-the-gn-guix-server][Step 3: Authorize the GN Guix server]]
- [[#step-4-install-and-run-gn2-][Step 4: Install and run GN2 ]]
- [[#run-mysql-server][Run MySQL server]]
+ - [[#gn2-dependency-graph][GN2 Dependency Graph]]
- [[#source-deployment][Source deployment]]
- [[#run-your-own-copy-of-gn2][Run your own copy of GN2]]
- [[#set-up-nginx-port-forwarding][Set up nginx port forwarding]]
@@ -34,11 +35,8 @@ main Guix package tree and that of the Genenetwork package
tree. Current supported versions can be found as the SHA values of
'gn-latest' branches of [[https://github.com/genenetwork/guix-bioinformatics/tree/gn-latest][Guix bioinformatics]] and [[https://github.com/genenetwork/guix/tree/gn-latest][GNU Guix main]].
-Graph of all runtime dependencies as installed by GNU Guix.
-
-#+ATTR_HTML: :title GN2_graph
-[[http://biobeat.org/gn2.svg]]
-
+For a full view of runtime dependencies as defined by GNU Guix, see
+the [[#gn2-dependency-graph][GN2 Dependency Graph]].
* Quick installation recipe
@@ -243,6 +241,13 @@ configuration.
Note for the plant database you can rename it to db_webqtl_s, or
change the settings in etc/default_settings.py to match your path.
+* GN2 Dependency Graph
+
+Graph of all runtime dependencies as installed by GNU Guix.
+
+#+ATTR_HTML: :title GN2_graph
+[[http://biobeat.org/gn2.svg]]
+
* Source deployment
This section gives a more elaborate instruction for installing GN2