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authorzsloan2016-02-08 17:55:27 +0000
committerzsloan2016-02-08 17:55:27 +0000
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tree93e5f9b6f50bd4156ed8de758212232ff84934a9 /doc/README.org
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parent7705462a70d17f65bf34a158ea76f100b56582c8 (diff)
downloadgenenetwork2-d6cace2f544ecd16b43f9d4054d0ae0ac8d74af5.tar.gz
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+#+TITLE: Installing GeneNetwork services with GNU Guix
+
+* Table of Contents :TOC:
+ - [[#introduction][Introduction]]
+ - [[#binary-deployment][Binary deployment]]
+ - [[#from-source-deployment][From source deployment]]
+
+* Introduction
+
+Large system deployments tend to get very complex. In this document we
+explain the GeneNetwork deployment system which is based on GNU Guix
+(see Pjotr's [[https://github.com/pjotrp/guix-notes/blob/master/README.md][Guix-notes]]).
+
+* Binary deployment
+
+NYA
+
+* From source deployment
+
+GNU Guix allows for [[https://github.com/pjotrp/guix-notes/blob/master/REPRODUCIBLE.org][reproducible deployment]] based on a checked out
+Guix repository - use gn-stable for that:
+
+#+begin_src sh :lang bash
+mkdir genenetwork
+cd genenetwork
+git checkout https://github.com/genenetwork/guix.git gn-stable-guix
+git checkout https://github.com/genenetwork/guix-bioinformatics.git
+#+end_src