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authorzsloan2016-05-18 20:06:41 +0000
committerzsloan2016-05-18 20:06:41 +0000
commitf8c89f7c24cbfcffdafd12ef2087f4de598ed4bd (patch)
treeca233c2f08151377de161a616e69031d557ff808 /doc/GUIX-Reproducible-from-source.org
parente36ffce0d972334b07ee91b817fc3f30ed3598c4 (diff)
parenta8945cc625f12e9cf733f469426bf0e4b8e83647 (diff)
downloadgenenetwork2-f8c89f7c24cbfcffdafd12ef2087f4de598ed4bd.tar.gz
Merge branch 'staging' of https://github.com/genenetwork/genenetwork2
Diffstat (limited to 'doc/GUIX-Reproducible-from-source.org')
-rw-r--r--doc/GUIX-Reproducible-from-source.org21
1 files changed, 20 insertions, 1 deletions
diff --git a/doc/GUIX-Reproducible-from-source.org b/doc/GUIX-Reproducible-from-source.org
index b88eb9e8..4399ea26 100644
--- a/doc/GUIX-Reproducible-from-source.org
+++ b/doc/GUIX-Reproducible-from-source.org
@@ -4,6 +4,7 @@
- [[#introduction][Introduction]]
- [[#binary-deployment][Binary deployment]]
- [[#from-source-deployment][From source deployment]]
+ - [[#create-archive][Create archive]]
* Introduction
@@ -31,5 +32,23 @@ Next build guix (and run) following the instructions in [[https://github.com/pjo
Once that is done we can add the guix-bioinformatics path with
-: env GUIX_PACKAGE_PATH=../guix-bioinformatics ./pre-inst-env guix package -A slurm
+: env GUIX_PACKAGE_PATH=../guix-bioinformatics command
+So
+
+#+begin_src sh :lang bash
+#+begin_src sh :lang bash
+gn-stable-guix$ env GUIX_PACKAGE_PATH=../guix-bioinformatics ./pre-inst-env guix package -A genenetwork
+genenetwork1 1.0-d622c803b out ../guix-bioinformatics/gn/packages/bioinformatics.scm:163:2
+genenetwork2 2.0-9e9475053 out ../guix-bioinformatics/gn/packages/bioinformatics.scm:215:2
+#+end_src sh :lang bash
+
+Install with
+
+#+begin_src sh :lang bash
+gn-stable-guix$ env GUIX_PACKAGE_PATH=../guix-bioinformatics ./pre-inst-env guix package -i genenetwork2
+#+end_src sh :lang bash
+
+* Create archive
+
+: env GUIX_PACKAGE_PATH=../../genenetwork/guix-bioinformatics/ ./pre-inst-env guix archive --export -r genenetwork2 > guix_gn2-2.0-9e9475053.nar