diff options
| author | zsloan | 2016-09-13 11:02:28 -0500 |
|---|---|---|
| committer | GitHub | 2016-09-13 11:02:28 -0500 |
| commit | 47afd15d6524a2071191952cd25796761353ad5e (patch) | |
| tree | ac7bae3642875a730c4cee662cd94ebaaebf3e7c /bin | |
| parent | d3ee8ad4b193cdcb9762a267955a2778ea75dc5a (diff) | |
| parent | f399b3bf514b396de67644d4b1e2018886cecac2 (diff) | |
| download | genenetwork2-47afd15d6524a2071191952cd25796761353ad5e.tar.gz | |
Merge pull request #181 from pjotrp/zsloan
Run scripts from ./wqflask - just like the webserver
Diffstat (limited to 'bin')
| -rwxr-xr-x | bin/genenetwork2 | 9 |
1 files changed, 5 insertions, 4 deletions
diff --git a/bin/genenetwork2 b/bin/genenetwork2 index 3a8c3ff4..d926d6a1 100755 --- a/bin/genenetwork2 +++ b/bin/genenetwork2 @@ -13,13 +13,12 @@ # Environment settings can be used to preconfigure as well as a # settings.py file. -# Absolute path to this script, e.g. /home/user/bin/foo.sh SCRIPT=$(readlink -f "$0") -# Absolute path this script is in, thus /home/user/bin GN2_BASE_PATH=$(dirname $(dirname "$SCRIPT")) GN2_GUIX_PATH=$GN2_BASE_PATH/lib/python2.7/site-packages/genenetwork2-2.0-py2.7.egg if [ -d $GN2_GUIX_PATH ]; then + echo GN2 is running from GUIX GN2_BASE_PATH=$GN2_GUIX_PATH fi echo $GN2_BASE_PATH @@ -48,9 +47,11 @@ fi # Now handle command parameter -c if [ $1 = '-c' ] ; then + cd $GN2_BASE_PATH/wqflask + cmd=${2#wqflask/} echo PYTHONPATH=$PYTHONPATH - echo RUNNING COMMAND $2 - /usr/bin/env python $2 + echo RUNNING COMMAND $cmd + /usr/bin/env python $cmd exit 0 fi |