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authorArun Isaac2022-01-03 17:51:04 +0530
committerArun Isaac2022-01-06 10:01:05 +0530
commit344e428126b60932bff4c62c5ded8c36519155e8 (patch)
treefd89b7242809826c608dab6b6645380e8e818100 /README.md
parentf4e336eb1ea526156e112cff97a3ec8137a2bc90 (diff)
downloadgenenetwork2-344e428126b60932bff4c62c5ded8c36519155e8.tar.gz
bin: Do not set environment variables set by guix shell.
The Guix python package accepts GUIX_PYTHONPATH instead of PYTHONPATH. `guix shell' sets GI_TYPELIB_PATH, GIO_EXTRA_MODULES, GUIX_GTK3_PATH, GUIX_PYTHONPATH, PATH, R_LIB_SITE and XDG_DATA_DIRS when necessary. There is no need to set these environment variables explicitly. * bin/genenetwork2: Do not set GI_TYPELIB_PATH, GIO_EXTRA_MODULES, GUIX_GTK3_PATH, PATH, PYTHONPATH, R_LIBS_SITE and XDG_DATA_DIRS. * README.md [Development]: Remove paragraph on injecting python modules locally.
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@@ -46,10 +46,6 @@ Also mariadb and redis need to be running, see
## Development
-It may be useful to pull in the GN3 python modules locally. For this
-use `GN3_PYTHONPATH` environment that gets injected in
-the ./bin/genenetwork2 startup.
-
## Testing
To have tests pass, the redis and mariadb instance should be running, because of