Merge /home/zas1024/gene

1 files changed, 262 insertions, 0 deletions

diff --git a/MANIFEST.in b/MANIFEST.in
new file mode 100644
index 00000000..f4ea2316
--- /dev/null
+++ b/MANIFEST.in
@@ -0,0 +1,262 @@
+include wqflask/*
+include wqflask/other_config/*
+include wqflask/other_config/nginx_conf/*
+include wqflask/cfg/*
+include wqflask/maintenance/*
+include wqflask/maintenance/dataset/*
+include wqflask/maintenance/dataset/datasampledir/*
+include wqflask/maintenance/dataset/datasampledir/load_phenotypes/*
+include wqflask/maintenance/dataset/datasampledir/load_genotypes/*
+include wqflask/utility/*
+include wqflask/wqflask/*
+include wqflask/wqflask/templates/*
+include wqflask/wqflask/templates/admin/*
+include wqflask/wqflask/templates/email/*
+include wqflask/wqflask/templates/collections/*
+include wqflask/wqflask/templates/new_security/*
+include wqflask/wqflask/correlation/*
+include wqflask/wqflask/interval_mapping/*
+include wqflask/wqflask/interval_analyst/*
+include wqflask/wqflask/my_pylmm/*
+include wqflask/wqflask/my_pylmm/scripts/*
+include wqflask/wqflask/my_pylmm/pyLMM/*
+include wqflask/wqflask/my_pylmm/data/*
+include wqflask/wqflask/static/*
+include wqflask/wqflask/static/dbdoc/*
+include wqflask/wqflask/static/new/*
+include wqflask/wqflask/static/new/js_external/*
+include wqflask/wqflask/static/new/js_external/zxcvbn/*
+include wqflask/wqflask/static/new/css/*
+include wqflask/wqflask/static/new/javascript/*
+include wqflask/wqflask/static/new/javascript/node_modules/*
+include wqflask/wqflask/static/new/javascript/node_modules/.bin/*
+include wqflask/wqflask/static/new/packages/*
+include wqflask/wqflask/static/new/packages/ValidationPlugin/*
+include wqflask/wqflask/static/new/packages/ValidationPlugin/dist/*
+include wqflask/wqflask/static/new/packages/ValidationPlugin/lib/*
+include wqflask/wqflask/static/new/packages/ValidationPlugin/localization/*
+include wqflask/wqflask/static/new/packages/ValidationPlugin/demo/*
+include wqflask/wqflask/static/new/packages/ValidationPlugin/demo/marketo/*
+include wqflask/wqflask/static/new/packages/ValidationPlugin/demo/marketo/images/*
+include wqflask/wqflask/static/new/packages/ValidationPlugin/demo/captcha/*
+include wqflask/wqflask/static/new/packages/ValidationPlugin/demo/captcha/fonts/*
+include wqflask/wqflask/static/new/packages/ValidationPlugin/demo/captcha/images/*
+include wqflask/wqflask/static/new/packages/ValidationPlugin/demo/images/*
+include wqflask/wqflask/static/new/packages/ValidationPlugin/demo/tabs/*
+include wqflask/wqflask/static/new/packages/ValidationPlugin/demo/js/*
+include wqflask/wqflask/static/new/packages/ValidationPlugin/demo/login/*
+include wqflask/wqflask/static/new/packages/ValidationPlugin/demo/login/images/*
+include wqflask/wqflask/static/new/packages/ValidationPlugin/demo/css/*
+include wqflask/wqflask/static/new/packages/ValidationPlugin/demo/milk/*
+include wqflask/wqflask/static/new/packages/ValidationPlugin/demo/multipart/*
+include wqflask/wqflask/static/new/packages/ValidationPlugin/demo/multipart/js/*
+include wqflask/wqflask/static/new/packages/ValidationPlugin/demo/tinymce/*
+include wqflask/wqflask/static/new/packages/ValidationPlugin/demo/tinymce/themes/*
+include wqflask/wqflask/static/new/packages/ValidationPlugin/demo/tinymce/themes/simple/*
+include wqflask/wqflask/static/new/packages/ValidationPlugin/demo/tinymce/themes/simple/img/*
+include wqflask/wqflask/static/new/packages/ValidationPlugin/demo/tinymce/themes/simple/langs/*
+include wqflask/wqflask/static/new/packages/ValidationPlugin/demo/tinymce/themes/simple/skins/*
+include wqflask/wqflask/static/new/packages/ValidationPlugin/demo/tinymce/themes/simple/skins/default/*
+include wqflask/wqflask/static/new/packages/ValidationPlugin/test/*
+include wqflask/wqflask/static/new/packages/ValidationPlugin/test/qunit/*
+include wqflask/wqflask/static/new/packages/ValidationPlugin/test/selects/*
+include wqflask/wqflask/static/new/packages/ValidationPlugin/test/firebug/*
+include wqflask/wqflask/static/new/packages/nvd3/*
+include wqflask/wqflask/static/new/packages/noUiSlider/*
+include wqflask/wqflask/static/new/packages/DataTables/*
+include wqflask/wqflask/static/new/packages/DataTables/images/*
+include wqflask/wqflask/static/new/packages/DataTables/js/*
+include wqflask/wqflask/static/new/packages/DataTables/css/*
+include wqflask/wqflask/static/new/packages/DataTables/src/*
+include wqflask/wqflask/static/new/packages/DataTables/src/api/*
+include wqflask/wqflask/static/new/packages/DataTables/src/core/*
+include wqflask/wqflask/static/new/packages/DataTables/src/ext/*
+include wqflask/wqflask/static/new/packages/DataTables/src/model/*
+include wqflask/wqflask/static/new/packages/DataTables/extensions/*
+include wqflask/wqflask/static/new/packages/DataTables/unit_testing/*
+include wqflask/wqflask/static/new/packages/DataTables/unit_testing/templates/*
+include wqflask/wqflask/static/new/packages/DataTables/unit_testing/performance/*
+include wqflask/wqflask/static/new/packages/DataTables/unit_testing/tests/*
+include wqflask/wqflask/static/new/packages/DataTables/unit_testing/tests/1_dom/*
+include wqflask/wqflask/static/new/packages/DataTables/unit_testing/tests_onhold/*
+include wqflask/wqflask/static/new/packages/DataTables/unit_testing/tests_onhold/5_ajax_objects/*
+include wqflask/wqflask/static/new/packages/DataTables/unit_testing/tests_onhold/3_ajax/*
+include wqflask/wqflask/static/new/packages/DataTables/unit_testing/tests_onhold/2_js/*
+include wqflask/wqflask/static/new/packages/DataTables/unit_testing/tests_onhold/4_server-side/*
+include wqflask/wqflask/static/new/packages/DataTables/unit_testing/tests_onhold/6_delayed_rendering/*
+include wqflask/wqflask/static/new/packages/DataTables/unit_testing/tests_onhold/1_dom/*
+include wqflask/wqflask/static/packages/*
+include wqflask/wqflask/static/packages/TableTools/*
+include wqflask/wqflask/static/packages/TableTools/media/*
+include wqflask/wqflask/static/packages/TableTools/media/images/*
+include wqflask/wqflask/static/packages/TableTools/media/images/psd/*
+include wqflask/wqflask/static/packages/TableTools/media/swf/*
+include wqflask/wqflask/static/packages/TableTools/media/js/*
+include wqflask/wqflask/static/packages/TableTools/media/css/*
+include wqflask/wqflask/static/packages/TableTools/media/as3/*
+include wqflask/wqflask/static/packages/TableTools/media/as3/lib/*
+include wqflask/wqflask/static/packages/underscore/*
+include wqflask/wqflask/static/packages/bootstrap/*
+include wqflask/wqflask/static/packages/bootstrap/fonts/*
+include wqflask/wqflask/static/packages/bootstrap/js/*
+include wqflask/wqflask/static/packages/bootstrap/css/*
+include wqflask/wqflask/static/packages/bootstrap/img/*
+include wqflask/wqflask/static/packages/novus-nvd3-d51729c/*
+include wqflask/wqflask/static/packages/novus-nvd3-d51729c/lib/*
+include wqflask/wqflask/static/packages/novus-nvd3-d51729c/deprecated/*
+include wqflask/wqflask/static/packages/novus-nvd3-d51729c/deprecated/charts/*
+include wqflask/wqflask/static/packages/novus-nvd3-d51729c/test/*
+include wqflask/wqflask/static/packages/novus-nvd3-d51729c/src/*
+include wqflask/wqflask/static/packages/novus-nvd3-d51729c/src/models/*
+include wqflask/wqflask/static/packages/novus-nvd3-d51729c/src/models/backup/*
+include wqflask/wqflask/static/packages/novus-nvd3-d51729c/examples/*
+include wqflask/wqflask/static/packages/novus-nvd3-d51729c/examples/images/*
+include wqflask/wqflask/static/packages/DT_bootstrap/*
+include wqflask/wqflask/static/packages/ckeditor/*
+include wqflask/wqflask/static/packages/ckeditor/lang/*
+include wqflask/wqflask/static/packages/ckeditor/adapters/*
+include wqflask/wqflask/static/packages/ckeditor/skins/*
+include wqflask/wqflask/static/packages/ckeditor/skins/moono/*
+include wqflask/wqflask/static/packages/ckeditor/skins/moono/images/*
+include wqflask/wqflask/static/packages/ckeditor/skins/moono/images/hidpi/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/div/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/div/dialogs/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/a11yhelp/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/a11yhelp/dialogs/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/a11yhelp/dialogs/lang/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/templates/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/templates/templates/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/templates/templates/images/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/templates/dialogs/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/find/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/find/dialogs/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/scayt/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/scayt/dialogs/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/dialog/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/flash/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/flash/dialogs/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/flash/images/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/about/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/about/dialogs/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/about/dialogs/hidpi/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/pastefromword/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/pastefromword/filter/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/specialchar/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/specialchar/dialogs/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/specialchar/dialogs/lang/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/wsc/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/wsc/dialogs/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/forms/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/forms/dialogs/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/forms/images/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/link/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/link/dialogs/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/link/images/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/link/images/hidpi/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/iframe/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/iframe/dialogs/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/iframe/images/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/colordialog/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/colordialog/dialogs/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/table/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/table/dialogs/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/smiley/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/smiley/dialogs/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/smiley/images/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/liststyle/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/liststyle/dialogs/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/clipboard/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/clipboard/dialogs/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/showblocks/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/showblocks/images/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/pagebreak/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/pagebreak/images/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/magicline/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/magicline/images/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/magicline/images/hidpi/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/preview/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/image/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/image/dialogs/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/image/images/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/tabletools/*
+include wqflask/wqflask/static/packages/ckeditor/plugins/tabletools/dialogs/*
+include wqflask/wqflask/static/packages/ckeditor/samples/*
+include wqflask/wqflask/static/packages/ckeditor/samples/assets/*
+include wqflask/wqflask/static/packages/ckeditor/samples/assets/uilanguages/*
+include wqflask/wqflask/static/packages/ckeditor/samples/assets/outputxhtml/*
+include wqflask/wqflask/static/packages/ckeditor/samples/assets/inlineall/*
+include wqflask/wqflask/static/packages/ckeditor/samples/plugins/*
+include wqflask/wqflask/static/packages/ckeditor/samples/plugins/dialog/*
+include wqflask/wqflask/static/packages/ckeditor/samples/plugins/dialog/assets/*
+include wqflask/wqflask/static/packages/ckeditor/samples/plugins/enterkey/*
+include wqflask/wqflask/static/packages/ckeditor/samples/plugins/toolbar/*
+include wqflask/wqflask/static/packages/ckeditor/samples/plugins/magicline/*
+include wqflask/wqflask/static/packages/ckeditor/samples/plugins/htmlwriter/*
+include wqflask/wqflask/static/packages/ckeditor/samples/plugins/htmlwriter/assets/*
+include wqflask/wqflask/static/packages/ckeditor/samples/plugins/htmlwriter/assets/outputforflash/*
+include wqflask/wqflask/static/packages/ckeditor/samples/plugins/wysiwygarea/*
+include wqflask/wqflask/static/packages/colorbox/*
+include wqflask/wqflask/static/packages/colorbox/example5/*
+include wqflask/wqflask/static/packages/colorbox/example5/images/*
+include wqflask/wqflask/static/packages/colorbox/example4/*
+include wqflask/wqflask/static/packages/colorbox/example4/images/*
+include wqflask/wqflask/static/packages/colorbox/example1/*
+include wqflask/wqflask/static/packages/colorbox/example1/images/*
+include wqflask/wqflask/static/packages/colorbox/content/*
+include wqflask/wqflask/static/packages/colorbox/example3/*
+include wqflask/wqflask/static/packages/colorbox/example3/images/*
+include wqflask/wqflask/static/packages/colorbox/example2/*
+include wqflask/wqflask/static/packages/colorbox/example2/images/*
+include wqflask/wqflask/static/packages/colorbox/i18n/*
+include wqflask/wqflask/static/packages/node/*
+include wqflask/wqflask/static/packages/node/tools/*
+include wqflask/wqflask/static/packages/node/tools/closure_linter/*
+include wqflask/wqflask/static/packages/bootstrap-old/*
+include wqflask/wqflask/static/packages/bootstrap-old/js/*
+include wqflask/wqflask/static/packages/bootstrap-old/css/*
+include wqflask/wqflask/static/packages/bootstrap-old/img/*
+include wqflask/wqflask/static/packages/pragmaticly-smart-time-ago-40fa376/*
+include wqflask/wqflask/static/packages/pragmaticly-smart-time-ago-40fa376/lib/*
+include wqflask/wqflask/static/packages/pragmaticly-smart-time-ago-40fa376/lib/locales/*
+include wqflask/wqflask/static/packages/pragmaticly-smart-time-ago-40fa376/test/*
+include wqflask/wqflask/static/packages/pragmaticly-smart-time-ago-40fa376/test/lib/*
+include wqflask/wqflask/static/packages/pragmaticly-smart-time-ago-40fa376/test/specs/*
+include wqflask/wqflask/static/packages/pragmaticly-smart-time-ago-40fa376/src/*
+include wqflask/wqflask/static/packages/pragmaticly-smart-time-ago-40fa376/src/locales/*
+include wqflask/wqflask/static/packages/jqplot/*
+include wqflask/wqflask/static/packages/jqplot/docs/*
+include wqflask/wqflask/static/packages/jqplot/docs/index/*
+include wqflask/wqflask/static/packages/jqplot/docs/styles/*
+include wqflask/wqflask/static/packages/jqplot/docs/files/*
+include wqflask/wqflask/static/packages/jqplot/docs/files/images/*
+include wqflask/wqflask/static/packages/jqplot/docs/files/plugins/*
+include wqflask/wqflask/static/packages/jqplot/docs/search/*
+include wqflask/wqflask/static/packages/jqplot/docs/javascript/*
+include wqflask/wqflask/static/packages/jqplot/examples/*
+include wqflask/wqflask/static/packages/jqplot/examples/colorpicker/*
+include wqflask/wqflask/static/packages/jqplot/examples/colorpicker/images/*
+include wqflask/wqflask/static/packages/jqplot/examples/images/*
+include wqflask/wqflask/static/packages/jqplot/examples/jquery-ui/*
+include wqflask/wqflask/static/packages/jqplot/examples/jquery-ui/js/*
+include wqflask/wqflask/static/packages/jqplot/examples/jquery-ui/css/*
+include wqflask/wqflask/static/packages/jqplot/examples/jquery-ui/css/smoothness/*
+include wqflask/wqflask/static/packages/jqplot/examples/jquery-ui/css/smoothness/images/*
+include wqflask/wqflask/static/packages/jqplot/examples/jquery-ui/css/ui-lightness/*
+include wqflask/wqflask/static/packages/jqplot/examples/jquery-ui/css/ui-lightness/images/*
+include wqflask/wqflask/static/packages/jqplot/examples/syntaxhighlighter/*
+include wqflask/wqflask/static/packages/jqplot/examples/syntaxhighlighter/scripts/*
+include wqflask/wqflask/static/packages/jqplot/examples/syntaxhighlighter/styles/*
+include wqflask/wqflask/static/packages/jqplot/plugins/*
+include wqflask/wqflask/correlation_matrix/*
+include wqflask/wqflask/show_trait/*
+include wqflask/wqflask/wgcna/*
+include wqflask/wqflask/marker_regression/*
+include wqflask/wqflask/heatmap/*
+include wqflask/flask_security/*
+include wqflask/flask_security/templates/*
+include wqflask/flask_security/templates/security/*
+include wqflask/flask_security/templates/security/email/*
+include wqflask/dbFunction/*
+include wqflask/basicStatistics/*
+include wqflask/base/*