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authorPjotr Prins2015-03-10 15:25:00 +0300
committerPjotr Prins2015-03-10 15:25:00 +0300
commitf116f59923ebe3fc52c27fac8fd571a70e323a68 (patch)
treee99ed4b9729df8fe329293a8f4ccccb363aea7ec
parentd6a1f63d08645ff680dad9880030f58881a127d9 (diff)
downloadgenenetwork2-f116f59923ebe3fc52c27fac8fd571a70e323a68.tar.gz
lmm.py: debugging output
-rw-r--r--wqflask/wqflask/my_pylmm/pyLMM/lmm.py6
1 files changed, 3 insertions, 3 deletions
diff --git a/wqflask/wqflask/my_pylmm/pyLMM/lmm.py b/wqflask/wqflask/my_pylmm/pyLMM/lmm.py
index 00bbf144..c2271611 100644
--- a/wqflask/wqflask/my_pylmm/pyLMM/lmm.py
+++ b/wqflask/wqflask/my_pylmm/pyLMM/lmm.py
@@ -727,9 +727,9 @@ def gn2_redis(key,species):
tempdata = temp_data.TempData(params['temp_uuid'])
- print('kinship', np.array(params['kinship_matrix'][0:10][0:10]))
- print('pheno', params['pheno_vector'][0:10])
- print('geno', params['genotype_matrix'][0:10][0:10])
+ print('kinship', np.array(params['kinship_matrix']))
+ print('pheno', np.array(params['pheno_vector']))
+ print('geno', np.array(params['genotype_matrix']))
if species == "human" :
ps, ts = run_human(pheno_vector = np.array(params['pheno_vector']),