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authorLei Yan2014-02-22 22:13:26 -0600
committerLei Yan2014-02-22 22:13:26 -0600
commitaf92bb48b2589d2804569863bc0306f787df1c60 (patch)
tree594ad9481cc6ffabfb8e687efc646d94e9328aa6
parent562e7ba9b6b5a051da1a9f0a046f39f480998be8 (diff)
downloadgenenetwork2-af92bb48b2589d2804569863bc0306f787df1c60.tar.gz
On branch master
-rw-r--r--wqflask/maintenance/dataset/datastructure.py14
-rw-r--r--wqflask/maintenance/dataset/load_genotypes.py11
2 files changed, 14 insertions, 11 deletions
diff --git a/wqflask/maintenance/dataset/datastructure.py b/wqflask/maintenance/dataset/datastructure.py
index 0ee4b4ab..e1d88df2 100644
--- a/wqflask/maintenance/dataset/datastructure.py
+++ b/wqflask/maintenance/dataset/datastructure.py
@@ -66,6 +66,20 @@ def get_genofreeze_byinbredsetid(inbredsetid):
     cursor.execute(sql, (inbredsetid))
     return cursor.fetchone()
 
+def get_nextdataid_genotype():
+    cursor, con = utilities.get_cursor()
+    sql = """
+        SELECT GenoData.`Id`
+        FROM GenoData
+        ORDER BY GenoData.`Id` DESC
+        LIMIT 1
+        """
+    cursor.execute(sql)
+    re = cursor.fetchone()
+    dataid = re[0]
+    dataid += 1
+    return dataid
+    
 def get_nextdataid_phenotype():
     cursor, con = utilities.get_cursor()
     sql = """
diff --git a/wqflask/maintenance/dataset/load_genotypes.py b/wqflask/maintenance/dataset/load_genotypes.py
index 124d3776..0e35fc24 100644
--- a/wqflask/maintenance/dataset/load_genotypes.py
+++ b/wqflask/maintenance/dataset/load_genotypes.py
@@ -55,17 +55,6 @@ def main(argv):
         print values
     return
 
-    # open db
-    host = 'localhost'
-    user = 'webqtl'
-    passwd = 'webqtl'
-    db = 'db_webqtl'
-    con = MySQLdb.Connect(db=db, user=user, passwd=passwd, host=host)
-    cursor = con.cursor()
-    # var
-    speciesid = int(argv[2])
-    inbredsetid = int(argv[3])
-    genofreezeid = int(argv[4])
     sql = """
         SELECT Id
         FROM GenoData