diff options
author | zsloan | 2021-07-09 21:41:11 +0000 |
---|---|---|
committer | zsloan | 2021-07-09 21:41:11 +0000 |
commit | 8dcb6972e4be972a37defdf96415fda7ffaac3db (patch) | |
tree | 5902b23fbb37473a57fd18151c8571cd751ebd69 | |
parent | fd726da54c9e65c0721de6f8181c2dde93831a7a (diff) | |
download | genenetwork2-8dcb6972e4be972a37defdf96415fda7ffaac3db.tar.gz |
Remove commented out function do_bicor
-rw-r--r-- | wqflask/wqflask/correlation/show_corr_results.py | 17 |
1 files changed, 0 insertions, 17 deletions
diff --git a/wqflask/wqflask/correlation/show_corr_results.py b/wqflask/wqflask/correlation/show_corr_results.py index 91716a6a..bebef9e7 100644 --- a/wqflask/wqflask/correlation/show_corr_results.py +++ b/wqflask/wqflask/correlation/show_corr_results.py @@ -158,23 +158,6 @@ def correlation_json_for_table(correlation_data, this_trait, this_dataset, targe return json.dumps(results_list) -# def do_bicor(this_trait_vals, target_trait_vals): -# r_library = ro.r["library"] # Map the library function -# r_options = ro.r["options"] # Map the options function - -# r_library("WGCNA") -# r_bicor = ro.r["bicorAndPvalue"] # Map the bicorAndPvalue function - -# r_options(stringsAsFactors=False) - -# this_vals = ro.Vector(this_trait_vals) -# target_vals = ro.Vector(target_trait_vals) - -# the_r, the_p, _fisher_transform, _the_t, _n_obs = [ -# numpy.asarray(x) for x in r_bicor(x=this_vals, y=target_vals)] - -# return the_r, the_p - def generate_corr_json(corr_results, this_trait, dataset, target_dataset, for_api=False): results_list = [] |