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| author | Danny Arends | 2020-05-06 10:11:53 -0500 |
|---|---|---|
| committer | Danny Arends | 2020-05-06 10:11:53 -0500 |
| commit | ab098bd0f298a0461a1c13c075029a2b7278d140 (patch) | |
| tree | e8e9dbb1c69b06c80104cfb158769ff99fd6a766 | |
| parent | 8c05b01213019735fcf72ffbacf4d02e4f803b07 (diff) | |
| download | genenetwork2-ab098bd0f298a0461a1c13c075029a2b7278d140.tar.gz | |
Disable saving of RData
| -rw-r--r-- | wqflask/wqflask/marker_regression/rqtl_mapping.py | 6 |
1 files changed, 3 insertions, 3 deletions
diff --git a/wqflask/wqflask/marker_regression/rqtl_mapping.py b/wqflask/wqflask/marker_regression/rqtl_mapping.py index a64a9f9a..152bb5be 100644 --- a/wqflask/wqflask/marker_regression/rqtl_mapping.py +++ b/wqflask/wqflask/marker_regression/rqtl_mapping.py @@ -66,9 +66,9 @@ def run_rqtl_geno(vals, samples, dataset, method, model, permCheck, num_perm, pe ro.r('all_covars <- cbind(marker_covars, trait_covars)') else: ro.r('all_covars <- marker_covars') - logger.info("Saving"); - ro.r('save.image(file = "/home/dannya/gn2-danny/cross.RData")') - logger.info("Saving Done"); + #logger.info("Saving"); + #ro.r('save.image(file = "/home/dannya/gn2-danny/cross.RData")') + #logger.info("Saving Done"); covars = ro.r['all_covars'] #DEBUG to save the session object to file #ro.r('save.image(file = "/home/dannya/gn2-danny/all.RData")') |