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authorLei Yan2017-06-26 19:38:49 +0000
committerLei Yan2017-06-26 19:38:49 +0000
commitafd2028e0ddab64e433eceb19e8cbd8d7149e080 (patch)
tree49bc7baf80010d2157f69f1c2d97be105728c2d1
parent6b64fd15c96da58a5a8119ac6d0d50efb6fc1ef7 (diff)
downloadgenenetwork2-afd2028e0ddab64e433eceb19e8cbd8d7149e080.tar.gz
Fix Correlation Scatterplot things
-rw-r--r--wqflask/wqflask/static/new/css/corr_scatter_plot2.css20
-rw-r--r--wqflask/wqflask/static/new/javascript/draw_corr_scatterplot-2.js132
-rw-r--r--wqflask/wqflask/templates/corr_scatterplot.html12
3 files changed, 86 insertions, 78 deletions
diff --git a/wqflask/wqflask/static/new/css/corr_scatter_plot2.css b/wqflask/wqflask/static/new/css/corr_scatter_plot2.css
index 92e777c2..e21d828f 100644
--- a/wqflask/wqflask/static/new/css/corr_scatter_plot2.css
+++ b/wqflask/wqflask/static/new/css/corr_scatter_plot2.css
@@ -1,19 +1,25 @@
.nvd3 .nv-axis.nv-x text {
- font-size: 16px;
- font-weight: normal;
- fill: black;
+ font-size: 17px;
+ font-weight: normal;
+ fill: black;
}
.nvd3 .nv-axis.nv-y text {
- font-size: 16px;
- font-weight: normal;
- fill: black;
+ font-size: 17px;
+ font-weight: normal;
+ fill:black;
}
-.nv-y .tick.zero line {
+.nv-x .nv-axis g path.domain {
stroke: black;
+ stroke-width: 2;
}
.nv-y .nv-axis g path.domain {
stroke: black;
+ stroke-width: 2;
+}
+
+.nvd3 .nv-axis.nv-x path.domain {
+ stroke-opacity: 1;
}
diff --git a/wqflask/wqflask/static/new/javascript/draw_corr_scatterplot-2.js b/wqflask/wqflask/static/new/javascript/draw_corr_scatterplot-2.js
index 7a5a86bd..f88e7d5d 100644
--- a/wqflask/wqflask/static/new/javascript/draw_corr_scatterplot-2.js
+++ b/wqflask/wqflask/static/new/javascript/draw_corr_scatterplot-2.js
@@ -1,74 +1,76 @@
var chart;
nv.addGraph(function() {
- //
- chart = nv.models.scatterChart();
- //
- chart.showLegend(false);
- chart.duration(300);
- chart.color(d3.scale.category10().range());
- chart.pointRange([200,0]);
- //
- // chart.showDistX(true);
- // chart.showDistY(true);
- chart.xAxis.tickFormat(d3.format('.02f'));
- chart.yAxis.tickFormat(d3.format('.02f'));
- // chart.showXAxis(false);
- // chart.showYAxis(false);
- chart.xAxis.axisLabel(js_data.trait_1);
- chart.yAxis.axisLabel(js_data.trait_2);
- //
- xmin = d3.min(js_data.data[0]);
- xmax = d3.max(js_data.data[0]);
- xrange = xmax - xmin;
- ymin = d3.min(js_data.data[1]);
- ymax = d3.max(js_data.data[1]);
- yrange = ymax - ymin;
- chart.xDomain([xmin - xrange/10, xmax + xrange/10]);
- chart.yDomain([ymin - yrange/10, ymax + yrange/10]);
- //
- d3.select('#scatterplot2 svg').datum(nv.log(getdata())).call(chart);
- nv.utils.windowResize(chart.update);
- return chart;
+ //
+ chart = nv.models.scatterChart();
+ //
+ chart.showLegend(false);
+ chart.duration(300);
+ chart.color(d3.scale.category10().range());
+ chart.pointRange([200,0]);
+ //
+ chart.xAxis.tickFormat(d3.format('.02f'));
+ chart.yAxis.tickFormat(d3.format('.02f'));
+ chart.xAxis.axisLabel(js_data.trait_1);
+ chart.xAxis.axisLabelDistance(11);
+ chart.yAxis.axisLabel(js_data.trait_2);
+ chart.yAxis.axisLabelDistance(11);
+ //
+ xmin = d3.min(js_data.data[0]);
+ xmax = d3.max(js_data.data[0]);
+ xrange = xmax - xmin;
+ ymin = d3.min(js_data.data[1]);
+ ymax = d3.max(js_data.data[1]);
+ yrange = ymax - ymin;
+ chart.xDomain([xmin - xrange/10, xmax + xrange/10]);
+ chart.yDomain([ymin - yrange/10, ymax + yrange/10]);
+ //
+ chart.tooltip.contentGenerator(function (obj) {
+ return '<b style="font-size: 18px">(' + obj.point.x + ', ' + obj.point.y + ')</b>';
+ });
+ //
+ d3.select('#scatterplot2 svg').datum(nv.log(getdata())).call(chart);
+ nv.utils.windowResize(chart.update);
+ return chart;
});
function getdata () {
- var data = [];
- data.push({
- values: [],
- slope: js_data.slope,
- intercept: js_data.intercept
- });
- for (j = 0; j < js_data.data[0].length; j++) {
- data[0].values.push({
- x: js_data.data[0][j],
- y: js_data.data[1][j],
- size: 10,
- shape: 'circle'
- });
- }
- return data;
+ var data = [];
+ data.push({
+ values: [],
+ slope: js_data.slope,
+ intercept: js_data.intercept
+ });
+ for (j = 0; j < js_data.data[0].length; j++) {
+ data[0].values.push({
+ x: js_data.data[0][j],
+ y: js_data.data[1][j],
+ size: 10,
+ shape: 'circle'
+ });
+ }
+ return data;
}
-
+
function randomData(groups, points) {
- var data = [],
- shapes = ['circle'],
- random = d3.random.normal();
- for (i = 0; i < groups; i++) {
- data.push({
- key: 'Group ' + i,
- values: [],
- slope: Math.random() - .01,
- intercept: Math.random() - .5
- });
- for (j = 0; j < points; j++) {
- data[i].values.push({
- x: random(),
- y: random(),
- size: Math.random(),
- shape: shapes[j % shapes.length]
- });
- }
- }
- return data;
+ var data = [],
+ shapes = ['circle'],
+ random = d3.random.normal();
+ for (i = 0; i < groups; i++) {
+ data.push({
+ key: 'Group ' + i,
+ values: [],
+ slope: Math.random() - .01,
+ intercept: Math.random() - .5
+ });
+ for (j = 0; j < points; j++) {
+ data[i].values.push({
+ x: random(),
+ y: random(),
+ size: Math.random(),
+ shape: shapes[j % shapes.length]
+ });
+ }
+ }
+ return data;
}
diff --git a/wqflask/wqflask/templates/corr_scatterplot.html b/wqflask/wqflask/templates/corr_scatterplot.html
index 4464025e..f07568a0 100644
--- a/wqflask/wqflask/templates/corr_scatterplot.html
+++ b/wqflask/wqflask/templates/corr_scatterplot.html
@@ -55,11 +55,11 @@
<table class="table">
<tbody>
- <tr><th class="text-right">num overlap</th> <td>{{jsdata.num_overlap}}</td></tr>
- <tr><th class="text-right">slope</th> <td>{{jsdata.slope}}</td></tr>
- <tr><th class="text-right">intercept</th> <td>{{jsdata.intercept}}</td></tr>
- <tr><th class="text-right">r value</th> <td>{{jsdata.r_value}}</td></tr>
- <tr><th class="text-right">p value</th> <td>{{jsdata.p_value}}</td></tr>
+ <tr><th class="text-right">number</th> <td>{{jsdata.num_overlap}}</td></tr>
+ <tr><th class="text-right">slope</th> <td>{{'%0.3f' % jsdata.slope}}</td></tr>
+ <tr><th class="text-right">intercept</th> <td>{{'%0.3f' % jsdata.intercept}}</td></tr>
+ <tr><th class="text-right">r value</th> <td>{{'%0.3f' % jsdata.r_value}}</td></tr>
+ <tr><th class="text-right">p value</th> <td>{{'%0.3e' % jsdata.p_value}}</td></tr>
</tbody>
</table>
@@ -85,7 +85,7 @@
-->
<div id="scatterplot2">
- <svg style="width: 1000px; height: 800px;"></svg>
+ <svg style="width: 1000px; height: 800px; margin-left: 10px;"></svg>
</div>
<br>