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authorzsloan2020-11-10 14:24:26 -0600
committerzsloan2020-11-10 14:24:26 -0600
commit25f7d30b9f052ec5d812bfe3bf9713df850cc267 (patch)
tree5199d80c5febc473d6c7a87e9aad20ee3bd7f2ec
parent61280ad47d8c0486b776011391deadcf7df39819 (diff)
downloadgenenetwork2-25f7d30b9f052ec5d812bfe3bf9713df850cc267.tar.gz
Changed logic for creating temp trait SampleList to account for both traits encoded as bytes and traits encoded as strings, since temp traits created before and after the Python 3 switchover will have different encoding
-rw-r--r--wqflask/wqflask/show_trait/SampleList.py19
1 files changed, 12 insertions, 7 deletions
diff --git a/wqflask/wqflask/show_trait/SampleList.py b/wqflask/wqflask/show_trait/SampleList.py
index 99ca7f88..a535c493 100644
--- a/wqflask/wqflask/show_trait/SampleList.py
+++ b/wqflask/wqflask/show_trait/SampleList.py
@@ -34,13 +34,18 @@ class SampleList(object):
# ZS: self.this_trait will be a list if it is a Temp trait
if isinstance(self.this_trait, list):
- if (counter <= len(self.this_trait) and
- self.this_trait[counter-1].decode("utf-8").lower() != 'x'):
- sample = webqtlCaseData.webqtlCaseData(
- name=sample_name,
- value=float(self.this_trait[counter-1]))
- else:
- sample = webqtlCaseData.webqtlCaseData(name=sample_name)
+ sample = webqtlCaseData.webqtlCaseData(name=sample_name)
+ if counter <= len(self.this_trait):
+ if isinstance(self.this_trait[counter-1], (bytes, bytearray)):
+ if (self.this_trait[counter-1].decode("utf-8").lower() != 'x'):
+ sample = webqtlCaseData.webqtlCaseData(
+ name=sample_name,
+ value=float(self.this_trait[counter-1]))
+ else:
+ if (self.this_trait[counter-1].lower() != 'x'):
+ sample = webqtlCaseData.webqtlCaseData(
+ name=sample_name,
+ value=float(self.this_trait[counter-1]))
else:
# ZS - If there's no value for the sample/strain,
# create the sample object (so samples with no value