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| author | BonfaceKilz | 2020-08-20 15:39:50 +0300 |
|---|---|---|
| committer | BonfaceKilz | 2020-08-20 15:39:50 +0300 |
| commit | 09cb4a05526c73229428401f356251bbfe8bf1cd (patch) | |
| tree | ee1367551a26924a54a2039e040d2dffb0bdcb0e | |
| parent | db41cd49b6d8ccd2c3318209118ffe098bc9293e (diff) | |
| download | genenetwork2-09cb4a05526c73229428401f356251bbfe8bf1cd.tar.gz | |
Add backward support for urllib
* wqflask/base/trait.py: Remove unused imports
* wqflask/db/call.py (Bench): Add urllib2 fallback for python2
| -rw-r--r-- | wqflask/base/trait.py | 3 | ||||
| -rw-r--r-- | wqflask/db/call.py | 11 |
2 files changed, 10 insertions, 4 deletions
diff --git a/wqflask/base/trait.py b/wqflask/base/trait.py index 05b272c3..a19b66f7 100644 --- a/wqflask/base/trait.py +++ b/wqflask/base/trait.py @@ -6,7 +6,6 @@ import resource import codecs import requests import random -import urllib.request, urllib.parse, urllib.error from base import webqtlConfig from base.webqtlCaseData import webqtlCaseData @@ -607,4 +606,4 @@ def retrieve_trait_info(trait, dataset, get_qtl_info=False): else: raise KeyError(repr(trait.name)+' information is not found in the database.') - return trait
\ No newline at end of file + return trait diff --git a/wqflask/db/call.py b/wqflask/db/call.py index 3b8f782e..0971d2a2 100644 --- a/wqflask/db/call.py +++ b/wqflask/db/call.py @@ -3,7 +3,10 @@ from flask import g import string -import urllib.request, urllib.error, urllib.parse +try: # Python2 support + import urllib.request, urllib.error, urllib.parse +except: + import urllib2 import json from utility.tools import USE_GN_SERVER, LOG_SQL, GN_SERVER_URL from utility.benchmark import Bench @@ -59,7 +62,11 @@ def gn_server(path): """ with Bench("GN_SERVER", LOG_SQL): - res = urllib.request.urlopen(GN_SERVER_URL+path) + res = () + try: + res = urllib.request.urlopen(GN_SERVER_URL+path) + except: + res = urllib2.urlopen(GN_SERVER_URL+path) rest = res.read() res2 = json.loads(rest) logger.debug(res2) |