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| author | zsloan | 2021-08-04 20:12:22 +0000 |
|---|---|---|
| committer | zsloan | 2021-08-26 19:06:26 +0000 |
| commit | 11dd6e34a3f58a83bf057cfe3d865d4da0047dd2 (patch) | |
| tree | 78c24edba2d20dc645e841dbed01709ffa4e8510 | |
| parent | 7f769f7ba20e3946020c1658fe7bc10978377957 (diff) | |
| download | genenetwork2-11dd6e34a3f58a83bf057cfe3d865d4da0047dd2.tar.gz | |
Fixed bug caused by pair_scan not always being set to a default
| -rw-r--r-- | wqflask/wqflask/marker_regression/run_mapping.py | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/wqflask/wqflask/marker_regression/run_mapping.py b/wqflask/wqflask/marker_regression/run_mapping.py index 7a2b9aaa..059b0f31 100644 --- a/wqflask/wqflask/marker_regression/run_mapping.py +++ b/wqflask/wqflask/marker_regression/run_mapping.py @@ -109,6 +109,7 @@ class RunMapping: self.mapping_results_path = "{}{}.csv".format( webqtlConfig.GENERATED_IMAGE_DIR, mapping_results_filename) + self.pair_scan = False self.manhattan_plot = False if 'manhattan_plot' in start_vars: if start_vars['manhattan_plot'].lower() != "false": @@ -237,7 +238,6 @@ class RunMapping: else: self.method = "em" self.model = start_vars['mapmodel_rqtl'] - self.pair_scan = False if 'pair_scan' in start_vars: self.pair_scan = True if self.permCheck and self.num_perm > 0: |