aboutsummaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authorPjotr Prins2016-11-08 20:09:36 +0000
committerPjotr Prins2016-11-08 20:09:36 +0000
commite6528ba528d14320322bcf9694c52879dedc418b (patch)
tree27083540c593733f5ffc3b6b06c58b5f7d1cccf7
parent201e1d8e9fbd14c17bcb39aba235b82729e723b9 (diff)
downloadgenenetwork2-e6528ba528d14320322bcf9694c52879dedc418b.tar.gz
README
-rw-r--r--doc/README.org13
1 files changed, 11 insertions, 2 deletions
diff --git a/doc/README.org b/doc/README.org
index 9c57953d..b38ea664 100644
--- a/doc/README.org
+++ b/doc/README.org
@@ -116,6 +116,12 @@ git clone --branch gn-deploy --recursive https://github.com/genenetwork/guix gui
cd guix-gn-deploy
#+end_src bash
+To test whether this is working try:
+
+#+begin_src bash
+#+end_src bash
+
+
** Step 3: Authorize the GN Guix server
GN2 has its own GNU Guix binary distribution server. To trust it you have
@@ -165,13 +171,16 @@ And install with
#+begin_src bash
env GUIX_PACKAGE_PATH=~/genenetwork/guix-bioinformatics/ \
guix package -i genenetwork2 \
- --substitute-urls="http://guix.genenetwork.org https://mirror.guixsd.org" \
- --fallback
+ --substitute-urls="http://guix.genenetwork.org"
#+end_src
Note: the order of the substitute url's may make a difference in speed
(put the one first that is fastest for your location and time of day).
+Note: if your system starts building or gives an error it may well be
+Step 3 did not succeed. The installation should actually be smooth at
+this point and only do binary installs (no compiling).
+
After installation you should be able to run genenetwork2 after updating
the Guix suggested environment vars. Check the output of