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authorPjotr Prins2015-03-11 14:44:21 +0300
committerPjotr Prins2015-03-11 14:44:21 +0300
commit4bb1113a9c23882ad91634c7cb77537e47a09713 (patch)
tree39007f8b9490b86c1fa7a473626418abe535cebd
parente492c9d3812ee2f6d6c7b640e216af09710b91d7 (diff)
downloadgenenetwork2-4bb1113a9c23882ad91634c7cb77537e47a09713.tar.gz
runlmm.py: message
-rw-r--r--wqflask/wqflask/my_pylmm/pyLMM/runlmm.py2
1 files changed, 1 insertions, 1 deletions
diff --git a/wqflask/wqflask/my_pylmm/pyLMM/runlmm.py b/wqflask/wqflask/my_pylmm/pyLMM/runlmm.py
index bd6c55fc..5b777580 100644
--- a/wqflask/wqflask/my_pylmm/pyLMM/runlmm.py
+++ b/wqflask/wqflask/my_pylmm/pyLMM/runlmm.py
@@ -114,7 +114,7 @@ if y != None:
v = np.isnan(y)
keep = True - v
if v.sum():
- if options.verbose: sys.stderr.write("Cleaning the phenotype vector by removing %d individuals...\n" % (v.sum()))
+ if options.verbose: sys.stderr.write("runlmm.py: Cleaning the phenotype vector by removing %d individuals...\n" % (v.sum()))
y = y[keep]
G = G[keep,:]
if k != None: k = k[keep,:][:,keep]