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authorPjotr Prins2016-10-03 08:29:30 +0000
committerPjotr Prins2016-10-03 08:29:30 +0000
commit2acd8aa41580aaccc4119a6f504bdfb5e986e0c2 (patch)
treeaf65b67a6488973f878127b6bc76c908e077ee79
parente1ba11b55fe849737a649939156c56fe90b0d3e9 (diff)
downloadgenenetwork2-2acd8aa41580aaccc4119a6f504bdfb5e986e0c2.tar.gz
Debug: sanitize some output
-rw-r--r--wqflask/base/webqtlCaseData.py2
-rw-r--r--wqflask/runserver.py1
-rw-r--r--wqflask/utility/tools.py9
-rw-r--r--wqflask/wqflask/__init__.py8
4 files changed, 6 insertions, 14 deletions
diff --git a/wqflask/base/webqtlCaseData.py b/wqflask/base/webqtlCaseData.py
index 8df9939e..2f88f778 100644
--- a/wqflask/base/webqtlCaseData.py
+++ b/wqflask/base/webqtlCaseData.py
@@ -16,8 +16,6 @@
 # Contact Drs. Robert W. Williams and Xiaodong Zhou (2010)
 # at rwilliams@uthsc.edu and xzhou15@uthsc.edu
 #
-#
-#
 # This module is used by GeneNetwork project (www.genenetwork.org)
 #
 # Created by GeneNetwork Core Team 2010/08/10
diff --git a/wqflask/runserver.py b/wqflask/runserver.py
index 5a8766b0..0342b7ad 100644
--- a/wqflask/runserver.py
+++ b/wqflask/runserver.py
@@ -16,7 +16,6 @@ GREEN = '\033[92m'
 BOLD  = '\033[1m'
 ENDC  = '\033[0m'
 
-
 import os
 app.config['SECRET_KEY'] = os.urandom(24)
 
diff --git a/wqflask/utility/tools.py b/wqflask/utility/tools.py
index 22779739..545c0427 100644
--- a/wqflask/utility/tools.py
+++ b/wqflask/utility/tools.py
@@ -50,7 +50,7 @@ def get_setting(command_id,guess=None):
         if command is None:
             command = value(guess)
             if command is None or command == "":
-                print command
+                # print command
                 raise Exception(command_id+' setting unknown or faulty (update default_settings.py?).')
     logger.debug("Set "+command_id+"="+str(command))
     return command
@@ -170,15 +170,14 @@ def show_settings():
     logging.basicConfig(level=log_level)
 
     logger.info(BLUE+"Mr. Mojo Risin 2"+ENDC)
-    print "runserver.py: ****** The webserver has the following configuration ******"
+    print "runserver.py: ****** Webserver configuration ******"
     keylist = app.config.keys()
     keylist.sort()
     for k in keylist:
         try:
-            print("%s %s%s%s%s" % (k,BLUE,BOLD,get_setting(k),ENDC))
+            print("%s: %s%s%s%s" % (k,BLUE,BOLD,get_setting(k),ENDC))
         except:
-            print("%s %s%s%s%s" % (k,GREEN,BOLD,app.config[k],ENDC))
-
+            print("%s: %s%s%s%s" % (k,GREEN,BOLD,app.config[k],ENDC))
 
 # Cached values
 WEBSERVER_MODE     = get_setting('WEBSERVER_MODE')
diff --git a/wqflask/wqflask/__init__.py b/wqflask/wqflask/__init__.py
index af271d02..602246d9 100644
--- a/wqflask/wqflask/__init__.py
+++ b/wqflask/wqflask/__init__.py
@@ -8,17 +8,13 @@ from utility import formatting
 
 import logging
 logger = logging.getLogger(__name__ )
-logging.basicConfig(level=logging.INFO)
+logging.basicConfig(level=logging.WARN)
 
 app = Flask(__name__)
 
 app.config.from_object('cfg.default_settings')   # Get the defaults from cfg.default_settings
 app.config.from_envvar('WQFLASK_SETTINGS')       # See http://flask.pocoo.org/docs/config/#configuring-from-files
-
-logger.debug("System path is")
-logger.debug(sys.path)
-logger.debug("App.config is")
-logger.debug(app.config)
+# Note we also use WQFLASK_OVERRIDES
 
 app.jinja_env.globals.update(
     undefined = jinja2.StrictUndefined,