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authorzsloan2020-11-11 12:57:20 -0600
committerzsloan2020-11-11 12:57:20 -0600
commit486b30324d67971f9fa9e741cf1c7f24d286dad2 (patch)
treeffa1bbae0a6c02e54a4473c03211a7e5d243c139
parenta40538d382b334b2fcb52c1f9bccbe0533ddbaba (diff)
downloadgenenetwork2-486b30324d67971f9fa9e741cf1c7f24d286dad2.tar.gz
- Fixed an issue causing the phenotype abbreviation to not be displayed properly in correlation results
- Set default description to N/A when there's no trait description for phenotype traits
-rw-r--r--wqflask/wqflask/correlation/show_corr_results.py13
1 files changed, 5 insertions, 8 deletions
diff --git a/wqflask/wqflask/correlation/show_corr_results.py b/wqflask/wqflask/correlation/show_corr_results.py
index 07b45860..394c113d 100644
--- a/wqflask/wqflask/correlation/show_corr_results.py
+++ b/wqflask/wqflask/correlation/show_corr_results.py
@@ -522,15 +522,12 @@ def generate_corr_json(corr_results, this_trait, dataset, target_dataset, for_ap
results_dict['tissue_corr'] = "%0.3f" % float(trait.tissue_corr)
results_dict['tissue_pvalue'] = "%0.3e" % float(trait.tissue_pvalue)
elif target_dataset.type == "Publish":
- results_dict['abbreviation'] = "N/A"
- if trait.abbreviation and len(trait.abbreviation) > 20:
- results_dict['abbreviation_display'] = trait.abbreviation[:20] + "..."
- else:
+ results_dict['abbreviation_display'] = "N/A"
+ if trait.abbreviation:
results_dict['abbreviation_display'] = trait.abbreviation
- # if len(trait.description_display) > 40:
- # results_dict['description'] = trait.description_display[:40] + "..."
- # else:
- results_dict['description'] = trait.description_display
+ results_dict['description'] = "N/A"
+ if trait.description_display:
+ results_dict['description'] = trait.description_display
results_dict['authors'] = trait.authors
authors_list = trait.authors.split(',')
if len(authors_list) > 6: