diff options
| author | BonfaceKilz | 2020-10-09 01:03:15 +0300 |
|---|---|---|
| committer | BonfaceKilz | 2020-10-09 01:05:42 +0300 |
| commit | 8db56f2472aa8d2549ff9fb2045f257c0388f6cc (patch) | |
| tree | 14932342688d42e66d39381aefed6e9862d2f300 | |
| parent | dca0dab44a40faecd39ad7a176674fd4389b1903 (diff) | |
| download | genenetwork2-8db56f2472aa8d2549ff9fb2045f257c0388f6cc.tar.gz | |
Replace "ncores" with "nthreads" param to r_CTLscan
| -rw-r--r-- | wqflask/wqflask/ctl/ctl_analysis.py | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/wqflask/wqflask/ctl/ctl_analysis.py b/wqflask/wqflask/ctl/ctl_analysis.py index 2a2124ca..6ffba28f 100644 --- a/wqflask/wqflask/ctl/ctl_analysis.py +++ b/wqflask/wqflask/ctl/ctl_analysis.py @@ -143,7 +143,7 @@ class CTL(object): #r_write_table(rPheno, "~/outputGN/pheno.csv") # Perform the CTL scan - res = self.r_CTLscan(rGeno, rPheno, strategy = strategy, nperm = nperm, parametric = parametric, ncores = 6) + res = self.r_CTLscan(rGeno, rPheno, strategy = strategy, nperm = nperm, parametric = parametric, nthreads=6) # Get significant interactions significant = self.r_CTLsignificant(res, significance = significance) |