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authorFrederick Muriuki Muriithi2022-10-28 16:15:17 +0300
committerFrederick Muriuki Muriithi2022-10-28 16:15:17 +0300
commit278621273f01435472a49fb84f77d9dbf581abae (patch)
treed3488a59a5465a6048833d415c1e8b54d3485e13
parent54c0b11510088f30c91ac14ee8b9f769a657903f (diff)
downloadgenenetwork2-278621273f01435472a49fb84f77d9dbf581abae.tar.gz
Add `sample_data` argument to function call.run-corrs-in-external-process
-rw-r--r--wqflask/wqflask/correlation/rust_correlation.py4
1 files changed, 3 insertions, 1 deletions
diff --git a/wqflask/wqflask/correlation/rust_correlation.py b/wqflask/wqflask/correlation/rust_correlation.py
index 4b7eedc0..a2f842bc 100644
--- a/wqflask/wqflask/correlation/rust_correlation.py
+++ b/wqflask/wqflask/correlation/rust_correlation.py
@@ -116,7 +116,9 @@ def compute_top_n_sample(start_vars, dataset, trait_list):
def __fetch_sample_ids__(samples_vals, samples_group):
all_samples = json.loads(samples_vals)
sample_data = get_sample_corr_data(
- sample_type=samples_group, all_samples=all_samples,
+ sample_type=samples_group,
+ sample_data=json.loads(start_vars["sample_vals"]),
+ all_samples=all_samples,
dataset_samples=dataset.group.all_samples_ordered())
with database_connector() as conn: