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| author | zsloan | 2020-08-06 12:29:13 -0500 |
|---|---|---|
| committer | zsloan | 2020-08-06 12:29:13 -0500 |
| commit | 85a384dc779a49f02ccee3088356e4873eacbd9a (patch) | |
| tree | 1d5da70d036ec30ec0e7a5a78e12ae38009db1be | |
| parent | 1e421a063d750df485a768aa6da14b3db592d409 (diff) | |
| download | genenetwork2-85a384dc779a49f02ccee3088356e4873eacbd9a.tar.gz | |
Made a change that should fix the issue with the Y axis ticks extending
too high in mapping results
* wqflask/wqflask/marker_regression/display_mapping_results.py - When in
ful genome view, I changed it to subject the yTopOffset when drawing the
Y axis; single chromosome view seems to work okay so it's conditional on
that
| -rw-r--r-- | wqflask/wqflask/marker_regression/display_mapping_results.py | 16 |
1 files changed, 12 insertions, 4 deletions
diff --git a/wqflask/wqflask/marker_regression/display_mapping_results.py b/wqflask/wqflask/marker_regression/display_mapping_results.py index 9ac4946b..75c1a8cd 100644 --- a/wqflask/wqflask/marker_regression/display_mapping_results.py +++ b/wqflask/wqflask/marker_regression/display_mapping_results.py @@ -1737,9 +1737,17 @@ class DisplayMappingResults(object): LRSLODFont=pid.Font(ttf="verdana", size=18*zoom*1.5, bold=0) yZero = yTopOffset + plotHeight - LRSHeightThresh = drawAreaHeight - AdditiveHeightThresh = drawAreaHeight/2 - DominanceHeightThresh = drawAreaHeight/2 + # LRSHeightThresh = drawAreaHeight + # AdditiveHeightThresh = drawAreaHeight/2 + # DominanceHeightThresh = drawAreaHeight/2 + if self.selectedChr == 1: + LRSHeightThresh = drawAreaHeight - yTopOffset + 30*(zoom - 1) + AdditiveHeightThresh = LRSHeightThresh/2 + DominanceHeightThresh = LRSHeightThresh/2 + else: + LRSHeightThresh = drawAreaHeight + AdditiveHeightThresh = drawAreaHeight/2 + DominanceHeightThresh = drawAreaHeight/2 # LRSHeightThresh = (yZero - yTopOffset + 30*(zoom - 1)) # AdditiveHeightThresh = LRSHeightThresh/2 # DominanceHeightThresh = LRSHeightThresh/2 @@ -1900,7 +1908,7 @@ class DisplayMappingResults(object): startPosX += newStartPosX oldStartPosX = newStartPosX - #ZS: This is beause the chromosome value stored in qtlresult['chr'] can be (for example) either X or 20 depending upon the mapping method/scale used + #ZS: This is because the chromosome value stored in qtlresult['chr'] can be (for example) either X or 20 depending upon the mapping method/scale used this_chr = str(self.ChrList[self.selectedChr][0]) if self.plotScale != "physic": this_chr = str(self.ChrList[self.selectedChr][1]+1) |