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authorBonfaceKilz2020-09-23 03:05:42 +0300
committerBonfaceKilz2020-09-23 03:05:42 +0300
commit855558084a538ebdfec0bd43f829ba8d0d314a21 (patch)
treedb7620f1024bd0d4dc40785dd2b79b546b3489c8
parentd9853ade5a70843c47792e8327301b7b3d5d4a6b (diff)
downloadgenenetwork2-855558084a538ebdfec0bd43f829ba8d0d314a21.tar.gz
Update github action to include mariadb service
* .github/workflows/main.yml: Add mariadb service. This makes the build pass because somewhere(because of cyclic imports), a connection to mariadb is required.
-rw-r--r--.github/workflows/main.yml13
1 files changed, 13 insertions, 0 deletions
diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml
index 4c8db1c4..94b0db75 100644
--- a/.github/workflows/main.yml
+++ b/.github/workflows/main.yml
@@ -13,6 +13,19 @@ jobs:
runs-on: ubuntu-latest
container: bonfacekilz/python2-genenetwork2:latest
+ services:
+ mariadb:
+ image: mariadb:latest
+ ports:
+ - 3306:3306
+ env:
+ MYSQL_USER: gn2
+ MYSQL_PASSWORD: mysql_password
+ MYSQL_ALLOW_EMPTY_PASSWORD: yes
+ MYSQL_DATABASE: db_webqtl_s
+ MYSQL_ROOT_PASSWORD: mysql_password
+ options: --health-cmd="mysqladmin ping" --health-interval=5s --health-timeout=2s --health-retries=3
+
steps:
# Use v1 of checkout since v2 fails
- name: Checkout Project