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| author | Pjotr Prins | 2015-03-17 10:08:41 +0300 |
|---|---|---|
| committer | Pjotr Prins | 2015-03-17 10:08:41 +0300 |
| commit | 7268ed46c9bce6fea58b55723c325426bdeeb617 (patch) | |
| tree | 1f308ba0bbf22e8a60e1efa1ae7a0f4f11779299 | |
| parent | 886934b9cf18cf092c5d6cd0667d860aa30e64b8 (diff) | |
| download | genenetwork2-7268ed46c9bce6fea58b55723c325426bdeeb617.tar.gz | |
GWAS multi-core: Tweak queue
| -rw-r--r-- | wqflask/wqflask/my_pylmm/pyLMM/gwas.py | 4 |
1 files changed, 2 insertions, 2 deletions
diff --git a/wqflask/wqflask/my_pylmm/pyLMM/gwas.py b/wqflask/wqflask/my_pylmm/pyLMM/gwas.py index f8d77ab6..2a472717 100644 --- a/wqflask/wqflask/my_pylmm/pyLMM/gwas.py +++ b/wqflask/wqflask/my_pylmm/pyLMM/gwas.py @@ -146,8 +146,8 @@ def gwas(Y,G,K,restricted_max_likelihood=True,refit=False,verbose=True): completed += 1 except Queue.Empty: pass - if job > completed + cpu_num + 5: - time.sleep(1) + if job > completed + cpu_num*2: + time.sleep(0.1) else: if job >= completed: break |