genenetwork2

ChangeLog v2.11 pre-release (date unknown)

This is a massive bug fix release with many improvements. For contributions see contributors and commits.

The current GNU Guix checkout is at

https://gitlab.com/genenetwork/guix-bioinformatics/tree/gn-latest-20190213

and

https://gitlab.com/genenetwork/guix/tree/gn-latest-20190213

With these branches a binary install can be fetched with

env GUIX_PACKAGE_PATH=../guix-bioinformatics ./pre-inst-env guix package --substitute-urls="https://berlin.guixsd.org http://guix.genenetwork.org https://mirror.hydra.gnu.org" -i genenetwork2 -p ~/opt/gn-latest-20190213

The key for guix.genenetwork.org is

(public-key
 (ecc
  (curve Ed25519)
  (q #D54AA5C8CBE268CBC82418AB83709611BAC88B39D44E68C18F6E16197B5B5CA0#)
  )
 )

Migrated PIL to pillow (preparing for Python3 migration)

Dropped pylmm support

Added GEMMA support

Front-end support

Added test framework and unit tests

Added python integration and unit tests