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authorGN3 production2022-12-14 21:44:09 -0600
committerGN3 production2022-12-14 21:44:09 -0600
commit47f5fa4fb29d45d0e76945766e861a3656589bfa (patch)
tree8440c77563bf7c8795ab6937fe2c97ca33b6ee89
parenta3d4bc848caa8021e14282bab1a13ca7aadeb82d (diff)
downloadgenenetwork3-47f5fa4fb29d45d0e76945766e861a3656589bfa.tar.gz
Running luna in containerluna
-rw-r--r--.guix-run4
-rw-r--r--guix.scm7
2 files changed, 9 insertions, 2 deletions
diff --git a/.guix-run b/.guix-run
new file mode 100644
index 0000000..4447fba
--- /dev/null
+++ b/.guix-run
@@ -0,0 +1,4 @@
+#! /bin/sh
+
+env GUIX_PACKAGE_PATH=~/guix-bioinformatics/ ~/opt/guix-gn3/bin/guix shell -C -D --network --expose=/home/gn2/production/genotype_files/ -f guix.scm -- gunicorn --bind 0.0.0.0:8087 --workers 8 --keep-alive 6000 --max-requests 10 --max-requests-jitter 5 --timeout 1200 wsgi:app
+
diff --git a/guix.scm b/guix.scm
index 9b8f399..8bdafa0 100644
--- a/guix.scm
+++ b/guix.scm
@@ -100,8 +100,8 @@
("python-redis" ,python-redis)
("python-requests" ,python-requests)
("python-scipy" ,python-scipy)
- ("python-sqlalchemy-stubs"
- ,python-sqlalchemy-stubs)
+ ; ("python-sqlalchemy-stubs"
+ ; ,python-sqlalchemy-stubs)
("r-optparse" ,r-optparse)
("r-qtl" ,r-qtl)
("r-stringi" ,r-stringi)
@@ -112,6 +112,9 @@
("rust-qtlreaper" ,rust-qtlreaper)
("python-flask-cors" ,python-flask-cors)))
(build-system python-build-system)
+ (arguments
+ `(#:tests? #f))
+
(home-page "https://github.com/genenetwork/genenetwork3")
(synopsis "GeneNetwork3 API for data science and machine learning.")
(description "GeneNetwork3 API for data science and machine learning.")