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author | zsloan | 2021-06-08 19:12:28 +0000 |
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committer | zsloan | 2021-06-08 19:12:28 +0000 |
commit | 3d3b153f42da30caab130a84b3eb7c3b8c3dd05b (patch) | |
tree | c88f8c0bd331f0a788c5fc50a0ef0917fb0acc76 | |
parent | 69f6397c8f07245f10b4e21b23f769567db9b17f (diff) | |
download | genenetwork2-3d3b153f42da30caab130a84b3eb7c3b8c3dd05b.tar.gz |
Fix issue where some groups apparently don't have samplelists
-rw-r--r-- | wqflask/wqflask/export_traits.py | 8 |
1 files changed, 6 insertions, 2 deletions
diff --git a/wqflask/wqflask/export_traits.py b/wqflask/wqflask/export_traits.py index a22d6acc..5459dc31 100644 --- a/wqflask/wqflask/export_traits.py +++ b/wqflask/wqflask/export_traits.py @@ -65,14 +65,18 @@ def export_search_results_csv(targs): traits_by_group = sort_traits_by_group(trait_list) file_list = [] - for group in list(traits_by_group.keys()): + for group in traits_by_group: group_traits = traits_by_group[group] + samplelist = group_traits[0].dataset.group.samplelist + if not samplelist: + continue + buff = io.StringIO() writer = csv.writer(buff) csv_rows = [] sample_headers = [] - for sample in group_traits[0].dataset.group.samplelist: + for sample in samplelist: sample_headers.append(sample) sample_headers.append(sample + "_SE") |