Efraim Flashner
c0c6263202
gn: Fix ratspub python error.
We are using an older version of python-keras and tensorflow
and therefore need to backport the AUC optimizations from 2.3.1
10 months ago
Efraim Flashner
e88085103b
gn: update ratspub to 0.3.1.
10 months ago
Efraim Flashner
cf08f2ce34
gn: python-rdflib-jsonld upstreamed.
10 months ago
Efraim Flashner
6d3d3b3d16
rearrange and deduplicate some packages
10 months ago
Efraim Flashner
40b410c5cd
gn: python-rdflib-jsonld: Update to 0.5.0.
10 months ago
Efraim Flashner
f1112e22ea
gn: ratspub: Update to 0.3.
Update inputs based on upstream's changes, add comments about skipped
input. Add hidden package of package-without-tests as dependency.
10 months ago
Efraim Flashner
f181f30043
Add missing module import
10 months ago
Efraim Flashner
803cef7f7e
gn: Update bh20-seq-resource.
10 months ago
Efraim Flashner
c7ca1195b9
gn: Package LMGPU and dependants
10 months ago
Efraim Flashner
6958c2828d
gn: remove upstreamed package
10 months ago
Efraim Flashner
68ba926a02
gn: Add bh20-seq-resource.
10 months ago
Efraim Flashner
c91739a73f
gn: Add diagnostic-slider
10 months ago
Efraim Flashner
ba6cc50345
gn: Upstream 2 python packages
10 months ago
Efraim Flashner
14dc7e6f85
gn: ratspub: Update to 0.2.2.
11 months ago
Efraim Flashner
b5177650f4
gn: ratspub: Adjust to edirect-gn upstreaming.
11 months ago
Efraim Flashner
7f4226ea03
fix typo
11 months ago
Efraim Flashner
febe9d081c
gn: Adjust for upstream changes
11 months ago
Efraim Flashner
c0e6576532
gn: Add r-tictoc.
11 months ago
Efraim Flashner
298ad0afa9
gn: Upstream edirect-gn
11 months ago
Efraim Flashner
da457bd06f
services: make genenetwork1 python24
11 months ago
Efraim Flashner
248c2e3905
gn: edirect-gn: Fix edirect-gn
This commit does many things:
Adjust for upstream update.
Fix the error not allowing us to download new data.
Use self-compiled binaries instead of downloading from upstream.
Install more scripts.
Wrap all the programs and scripts so they can work in a pureenvironment.
11 months ago
Efraim Flashner
132d494f4e
gn: remove upstreamed package
11 months ago
Efraim Flashner
7e7a8a4c59
gn: edirect-gn: Build go packages from source.
11 months ago
Efraim Flashner
165e12f943
gn: Add missing module import.
11 months ago
Efraim Flashner
99cbd15b00
gn: Add grocsvs and dependencies
11 months ago
Efraim Flashner
9f6b35cac5
gn: singlecellrshiny: Update home-page.
11 months ago
Efraim Flashner
d3d71158cb
gn: singlecellrshiny is ready
1 year ago
Efraim Flashner
3c3c3e830c
WIP: singlecellrshiny
1 year ago
Efraim Flashner
91e66ebbd3
WIP: incomplete update to singlecellrshiny.
1 year ago
Efraim Flashner
dce1ae9dbf
gn: Update edirect-gn to match upstream update.
1 year ago
Efraim Flashner
5656ce244f
fix typo
1 year ago
Efraim Flashner
f5d94e1aba
fix typo
1 year ago
Efraim Flashner
ae659bb705
gn: Update BNW service and README
1 year ago
Efraim Flashner
319c7e8758
Merge remote-tracking branch 'gitea/master'
1 year ago
Efraim Flashner
a07cc9e177
add archive-pubmed systemd service and timer
1 year ago
Efraim Flashner
1b33411fca
gn: bnw: Only use packaged javascript
1 year ago
Efraim Flashner
9a16a60554
gn: Run BNW entirely inside a container
1 year ago
Efraim Flashner
0bd3232df5
gn: octave@3.4: Skip tests
1 year ago
Efraim Flashner
bc065d21f3
gn: edirect-gn: Wrap more binaries
1 year ago
Efraim Flashner
0460e93f08
gn: ratspub: wrap with more referenced binaries
1 year ago
pjotrp
eb94413a21
Merge branch 'master' of http://git.genenetwork.org/guix-bioinformatics/guix-bioinformatics
1 year ago
pjotrp
db77e0f800
Links
1 year ago
pjotrp
5df680178c
Update
1 year ago
Efraim Flashner
f59968258e
gn: Upstream more crates.
1 year ago
Efraim Flashner
676e398c80
gn: ratspub: Patch javascript references
1 year ago
Efraim Flashner
5eb0b0bdba
gn: ratspub: Update to 0.1.
1 year ago
Efraim Flashner
f57261e371
gn: edirect binary seems to have been modified again
1 year ago
pjotrp
f7b75fe173
Merge branch 'master' of gitlab.com:genenetwork/guix-bioinformatics
1 year ago
Efraim Flashner
ee8620533b
gn: copy package-with-explicit-python.
The magic '@@' no longer works since the upstream switch to guile3.0
1 year ago
Efraim Flashner
9a196919b5
gn: rust-qtlreaper: Enable tests.
1 year ago