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37 строки
1.5 KiB
37 строки
1.5 KiB
/*
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This file is part of BioD.
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Copyright (C) 2012 Artem Tarasov <lomereiter@gmail.com>
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Permission is hereby granted, free of charge, to any person obtaining a
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copy of this software and associated documentation files (the "Software"),
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to deal in the Software without restriction, including without limitation
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the rights to use, copy, modify, merge, publish, distribute, sublicense,
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and/or sell copies of the Software, and to permit persons to whom the
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Software is furnished to do so, subject to the following conditions:
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The above copyright notice and this permission notice shall be included in
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all copies or substantial portions of the Software.
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THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
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IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
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FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
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AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
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LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
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FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER
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DEALINGS IN THE SOFTWARE.
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*/
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module bio.bam.constants;
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public import bio.core.bgzf.constants;
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immutable BAM_MAGIC = "BAM\1";
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immutable BAI_MAGIC = "BAI\1";
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immutable ubyte BAM_SI1 = 66;
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immutable ubyte BAM_SI2 = 67;
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immutable ubyte[28] BAM_EOF = BGZF_EOF;
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immutable BAI_MAX_BIN_ID = 37449;
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immutable BAI_MAX_NONLEAF_BIN_ID = 4680;
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immutable BAI_LINEAR_INDEX_WINDOW_SIZE = 16384;
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