From 35405450385ded8797a9a6388e6e2801381f2894 Mon Sep 17 00:00:00 2001
From: Pjotr Prins
Date: Sun, 9 Jul 2017 08:07:46 +0000
Subject: Test: check result

---
 test/test_suite.sh | 7 +++++--
 1 file changed, 5 insertions(+), 2 deletions(-)

(limited to 'test')

diff --git a/test/test_suite.sh b/test/test_suite.sh
index c6aa38e..effc056 100755
--- a/test/test_suite.sh
+++ b/test/test_suite.sh
@@ -2,10 +2,13 @@
 
 gemma=../bin/gemma
 
-testCenteredRelatednessMatrix() {
+testCenteredRelatednessMatrixK() {
     $gemma -g ../example/mouse_hs1940.geno.txt.gz -p ../example/mouse_hs1940.pheno.txt \
-                 -a ../example/mouse_hs1940.anno.txt -gk -o mouse_hs1940
+           -a ../example/mouse_hs1940.anno.txt -gk -o mouse_hs1940
     assertEquals "3763600" `wc -w < output/mouse_hs1940.cXX.txt`
+    # assertEquals "15f680c" `md5sum < output/mouse_hs1940.cXX.txt | head -c 7`
+    assertEquals "0.335" `head -c 5 output/mouse_hs1940.cXX.txt`
+    assertEquals "29.691" `awk '{s+=substr($1,0,6)}END{print s}' output/mouse_hs1940.cXX.txt`
 }
 
 shunit2=`which shunit2`
-- 
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