From 1d60d303945b4976984f379e420217a7230d79a9 Mon Sep 17 00:00:00 2001
From: Pjotr Prins
Date: Sat, 28 Nov 2020 15:09:05 +0000
Subject: Prepare for release

---
 test/dev_test_suite.sh     | 1 +
 test/lengthy_test_suite.sh | 1 +
 test/test_suite.sh         | 5 +++--
 3 files changed, 5 insertions(+), 2 deletions(-)

(limited to 'test')

diff --git a/test/dev_test_suite.sh b/test/dev_test_suite.sh
index 0e36218..903c72f 100755
--- a/test/dev_test_suite.sh
+++ b/test/dev_test_suite.sh
@@ -3,6 +3,7 @@
 gemma=../bin/gemma
 # gemmaopts="-debug -strict"
 gemmaopts="-debug -check"
+export GSL_RNG_SEED=100
 
 testLinearModel() {
     $gemma $gemmaopts -g ../example/mouse_hs1940.geno.txt.gz \
diff --git a/test/lengthy_test_suite.sh b/test/lengthy_test_suite.sh
index 231475e..6e93220 100755
--- a/test/lengthy_test_suite.sh
+++ b/test/lengthy_test_suite.sh
@@ -3,6 +3,7 @@
 # Long running tests go here
 
 gemma=../bin/gemma
+export GSL_RNG_SEED=100
 
 testPlinkStandardRelatednessMatrixK() {
     testname=testPlinkStandardRelatednessMatrixK
diff --git a/test/test_suite.sh b/test/test_suite.sh
index a598cd2..cc244c0 100755
--- a/test/test_suite.sh
+++ b/test/test_suite.sh
@@ -2,6 +2,7 @@
 
 gemma=../bin/gemma
 gemmaopts="-debug"
+export GSL_RNG_SEED=10
 
 testBslmm1() {
     outn=mouse_hs1940_CD8_bslmm
@@ -72,10 +73,10 @@ testBslmm5() {
            -epm ./output/mouse_hs1940_CD8_bslmm_cc1.param.txt \
            -emu ./output/mouse_hs1940_CD8_bslmm_cc1.log.txt \
            -predict \
-           -o $outn
+           -o $outn -seed 100
     assertEquals 0 $?
     outfn=output/$outn.prdt.txt
-    assertEquals "550.67" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn`
+    assertEquals "571.08" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn`
 }
 
 testCenteredRelatednessMatrixKFullLOCO1() {
-- 
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