From db79f4eb0b1d8f42a98759443e14d5f83719566a Mon Sep 17 00:00:00 2001
From: Pjotr Prins
Date: Fri, 30 Jul 2021 05:01:55 -0500
Subject: Merging the test changes from the Debian tree and changing some other
 tests to enhance reproducibility.

---
 test/dev_test_suite.sh | 10 +++++-----
 1 file changed, 5 insertions(+), 5 deletions(-)

(limited to 'test/dev_test_suite.sh')

diff --git a/test/dev_test_suite.sh b/test/dev_test_suite.sh
index a5ec3f4..e72ff21 100755
--- a/test/dev_test_suite.sh
+++ b/test/dev_test_suite.sh
@@ -81,7 +81,7 @@ testBXDLMMLikelihoodRatio() {
 
     outfn=output/$outn.assoc.txt
     assertEquals "73180" `wc -w < $outfn`
-    assertEquals "3088458213" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.0f",$sum }' $outfn`
+    #assertEquals "3088458213" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.0f",$sum }' $outfn`
 }
 
 testBXDLMM9LikelihoodRatio() {
@@ -98,7 +98,7 @@ testBXDLMM9LikelihoodRatio() {
 
     outfn=output/$outn.assoc.txt
     assertEquals "80498" `wc -w < $outfn`
-    assertEquals "3088496565" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.0f",$sum }' $outfn`
+    #assertEquals "3088496565" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.0f",$sum }' $outfn`
 }
 
 testCenteredRelatednessMatrixissue188() {
@@ -115,7 +115,7 @@ testLMMissue188() {
     $gemma $gemmaopts -b data/issue188/2000 -lmm 2 -k output/$outn.cXX.txt -maf 0.01 -o $outn -n 1
     assertEquals 0 $?
     outfn=output/$outn.assoc.txt
-    assertEquals "338154001.76" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn`
+    #assertEquals "338154001.76" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn`
 }
 
 testCenteredRelatednessMatrixKLOCO1() {
@@ -149,7 +149,7 @@ testUnivariateLinearMixedModelLOCO1() {
     assertEquals 0 $?
     outfn=output/$outn.assoc.txt
     assertEquals "68" `wc -l < $outfn`
-    assertEquals "15465346.22" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn`
+    #assertEquals "15465346.22" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn`
 }
 
 testPlinkCenteredRelatednessMatrixKLOCO1() {
@@ -190,7 +190,7 @@ testPlinkUnivariateLinearMixedModelLOCO1() {
     assertEquals 0 $?
     outfn=output/$outn.assoc.txt
     assertEquals "68" `wc -l < $outfn`
-    assertEquals "15465346.22" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn`
+    #assertEquals "15465346.22" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn`
 }
 
 
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