From 99527865c00b74a3a48daa2e1e5eb7c71bd861b5 Mon Sep 17 00:00:00 2001
From: Pjotr Prins
Date: Tue, 22 Aug 2017 07:56:07 +0000
Subject: Fixes matrix checks - looking saner now

- Matrix checks as described in https://github.com/genetics-statistics/GEMMA/issues/72
- introduces -strict switch which will exit on certain conditions
- zero small eigenvalues in EigenDecomp_Zeroed which also checks for negative values
- commented out float versions of functions in lapack.cpp (pre-removal)
- reverted on disabled regression tests (GEMMA shows its previous behaviour now)
---
 src/param.h | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

(limited to 'src/param.h')

diff --git a/src/param.h b/src/param.h
index 249bf02..08b1e10 100644
--- a/src/param.h
+++ b/src/param.h
@@ -112,7 +112,8 @@ public:
 class PARAM {
 public:
   // IO-related parameters
-  bool mode_check = true;
+  bool mode_check = true;   // run data checks (slower)
+  bool mode_strict = false; // exit on some data checks
   bool mode_silence;
   bool mode_debug = false;
   uint issue; // enable tests for issue on github tracker
-- 
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